metal-organic compounds
Bis[μ2-1-(2-carboxybenzoyl)thiosemicarbazide(3−)]hexapyridinetrinickel(II) pyridine monosolvate monohydrate
aSchool of Chemistry and Chemical Engineering, Liaocheng University, Shandong 252059, People's Republic of China
*Correspondence e-mail: lidacheng@lcu.edu.cn
The reaction of Ni(OAc)2·4H2O with 1-(2-carboxybenzoyl)thiosemicarbazide (H3L) produces the title complex, [Ni3(C9H6N3O3S)2(C5H5N)6]·C5H5N·2H2O, which contains an linear array of three NiII atoms. The contains half of the complex molecule, a water molecule and a half-molecule of pyridine. The central NiII atom, located on a crystallographic inversion centre, has an octahedral N4O2 environment. The other two NiII atoms have a square-pyramidal N3OS environment, each bridged to the central NiII atom via the L3− group. The carboxylate groups coordinate to the metal atoms in a monodentate fashion. The water molecule is linked to the complex molecule via O—H⋯O hydrogen bonds. The molecules further assemble into a one-dimensional network parallel to [001] via intermolecular N—H⋯O hydrogen bonds.
Related literature
For related structures and the synthesis of the 1-(2-carboxybenzoyl)thiosemicarbazide ligand, see: Shen et al. (1997).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536811048367/vm2135sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536811048367/vm2135Isup2.hkl
The title compound, [Ni3L2(Py)6].Py.H2O, was synthesized by the reaction of 3 mmol Ni(OAc)2.4H2O and 2 mmol 1-(2-carboxybenzoyl) thiosemicarbazide (H3L, synthesis described in Shen et al., 1997) in 10 ml methanol and 5 ml pyridine. The solution was stired for 6 hours. After slow evaporation of the solution over one month, deep red crystals suitable for X-ray diffraction were obtained. (yield 42.3%, m.p. 534-538 K).
All H atoms were placed in geometrically idealized positions and treated as riding on their parent atoms, with C—H 0.93, N—H 0.86, and Uiso(H) = 1.2Ueq(C) or Uiso(H) = 1.5Ueq(N). The H atoms of the water molecule were located from the Fourier map and refined constraining the O-H distances at 0.85 Å and Uiso(H) = 1.2Ueq(O) .
The
of the title complex contains a half complex, a water molecule and a half pyridine molecule (symmetry codes to generate second half of complex and pyridine are -x + 1/2,-y + 1/2,-z + 1 and -x, y, -z + 1/2, respectively). The three nickel atoms are linked together linearly by two µ2- bridged L groups. The central Ni2 atom is in a six-coordinated octahedral geometry with two pyridine molecules in axial positions and two amido-carbonyl oxygen atoms and two nitrogen atoms in the equatorial plane. The terminal Ni1 atom is coordinated in a trigonal-bipyramidal geometry composed of two nitrogen atoms from two pyridine molecules, one sulfur atom from the thiourea, one amido-carbonyl nitrogen atom, as well as one oxygen atom from the carboxylate. Thus, the carbonyl oxygen O1 and amine nitrogen N2 atoms of one ligand are bound to Ni2 forming a five-membered chelate ring, while the benzoyloxy oxygen O2, amine nitrogen N1 and sulfydryl sulfur S1 atoms are bound to terminal Ni1 atom forming a five-membered chelate ring and a seven-membered ring. The special position of the central Ni atom generates the linear organization of the three Ni atoms. The molecules further assemble into a one-dimensional network via intermolecular N—H···O hydrogen bonds (Table 1).For related structures and the synthesis of the 1-(2-carboxybenzoyl)thiosemicarbazide ligand, see: Shen et al. (1997).
Data collection: SMART (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[Ni3(C9H6N3O3S)2(C5H5N)6]·C5H5N·2H2O | F(000) = 2560 |
Mr = 1238.32 | Dx = 1.506 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 1906 reflections |
a = 34.490 (3) Å | θ = 2.3–23.5° |
b = 8.8510 (7) Å | µ = 1.17 mm−1 |
c = 17.8941 (16) Å | T = 293 K |
β = 90.912 (1)° | Block, black |
V = 5461.9 (8) Å3 | 0.38 × 0.33 × 0.15 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 4808 independent reflections |
Radiation source: fine-focus sealed tube | 2586 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.073 |
phi and ω scans | θmax = 25.0°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −40→32 |
Tmin = 0.666, Tmax = 0.844 | k = −10→10 |
13285 measured reflections | l = −18→21 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.105 | H-atom parameters constrained |
S = 0.99 | w = 1/[σ2(Fo2) + (0.032P)2] where P = (Fo2 + 2Fc2)/3 |
4808 reflections | (Δ/σ)max < 0.001 |
359 parameters | Δρmax = 0.65 e Å−3 |
0 restraints | Δρmin = −0.47 e Å−3 |
[Ni3(C9H6N3O3S)2(C5H5N)6]·C5H5N·2H2O | V = 5461.9 (8) Å3 |
Mr = 1238.32 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 34.490 (3) Å | µ = 1.17 mm−1 |
b = 8.8510 (7) Å | T = 293 K |
c = 17.8941 (16) Å | 0.38 × 0.33 × 0.15 mm |
β = 90.912 (1)° |
Bruker SMART CCD area-detector diffractometer | 4808 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2586 reflections with I > 2σ(I) |
Tmin = 0.666, Tmax = 0.844 | Rint = 0.073 |
13285 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 0 restraints |
wR(F2) = 0.105 | H-atom parameters constrained |
S = 0.99 | Δρmax = 0.65 e Å−3 |
4808 reflections | Δρmin = −0.47 e Å−3 |
359 parameters |
x | y | z | Uiso*/Ueq | ||
Ni1 | 0.112323 (15) | 0.26236 (7) | 0.43526 (3) | 0.03118 (19) | |
Ni2 | 0.2500 | 0.2500 | 0.5000 | 0.0262 (2) | |
S1 | 0.11994 (3) | 0.37106 (14) | 0.55102 (7) | 0.0381 (3) | |
N1 | 0.17092 (9) | 0.2355 (4) | 0.44216 (18) | 0.0268 (8) | |
N2 | 0.19160 (9) | 0.2959 (4) | 0.50367 (19) | 0.0267 (9) | |
N3 | 0.18838 (10) | 0.4244 (4) | 0.61357 (19) | 0.0389 (10) | |
H3A | 0.2132 | 0.4211 | 0.6176 | 0.058* | |
H3B | 0.1750 | 0.4680 | 0.6476 | 0.058* | |
N4 | 0.05243 (11) | 0.3042 (5) | 0.4317 (2) | 0.0410 (11) | |
N5 | 0.10345 (10) | 0.0358 (4) | 0.4379 (2) | 0.0381 (10) | |
N6 | 0.25781 (10) | 0.4472 (4) | 0.4275 (2) | 0.0323 (9) | |
O1 | 0.22954 (8) | 0.1319 (3) | 0.41037 (15) | 0.0287 (7) | |
O2 | 0.11502 (9) | 0.3467 (4) | 0.33229 (17) | 0.0438 (9) | |
O3 | 0.15374 (11) | 0.4067 (4) | 0.2398 (2) | 0.0701 (12) | |
C1 | 0.17038 (12) | 0.3613 (5) | 0.5543 (2) | 0.0275 (11) | |
C2 | 0.19307 (12) | 0.1557 (5) | 0.3982 (2) | 0.0277 (11) | |
C3 | 0.14056 (14) | 0.3153 (6) | 0.2833 (3) | 0.0432 (13) | |
C4 | 0.17538 (11) | 0.0773 (5) | 0.3323 (2) | 0.0263 (10) | |
C5 | 0.15244 (12) | 0.1517 (5) | 0.2784 (2) | 0.0327 (11) | |
C6 | 0.13875 (14) | 0.0710 (7) | 0.2166 (3) | 0.0513 (14) | |
H6 | 0.1241 | 0.1200 | 0.1799 | 0.062* | |
C7 | 0.14671 (16) | −0.0802 (7) | 0.2094 (3) | 0.0591 (16) | |
H7 | 0.1369 | −0.1337 | 0.1686 | 0.071* | |
C8 | 0.16930 (15) | −0.1533 (6) | 0.2626 (3) | 0.0574 (16) | |
H8 | 0.1746 | −0.2559 | 0.2579 | 0.069* | |
C9 | 0.18387 (13) | −0.0729 (5) | 0.3224 (3) | 0.0391 (12) | |
H9 | 0.1999 | −0.1215 | 0.3572 | 0.047* | |
C10 | 0.02994 (14) | 0.2411 (6) | 0.4830 (3) | 0.0618 (16) | |
H10 | 0.0414 | 0.1777 | 0.5184 | 0.074* | |
C11 | −0.00927 (16) | 0.2651 (8) | 0.4862 (4) | 0.078 (2) | |
H11 | −0.0237 | 0.2186 | 0.5232 | 0.094* | |
C12 | −0.02678 (17) | 0.3547 (8) | 0.4363 (4) | 0.081 (2) | |
H12 | −0.0534 | 0.3716 | 0.4379 | 0.098* | |
C13 | −0.00470 (17) | 0.4215 (7) | 0.3825 (4) | 0.076 (2) | |
H13 | −0.0159 | 0.4851 | 0.3469 | 0.091* | |
C14 | 0.03455 (15) | 0.3917 (6) | 0.3827 (3) | 0.0557 (15) | |
H14 | 0.0493 | 0.4364 | 0.3457 | 0.067* | |
C15 | 0.12039 (13) | −0.0501 (6) | 0.4910 (3) | 0.0475 (14) | |
H15 | 0.1316 | −0.0021 | 0.5321 | 0.057* | |
C16 | 0.12199 (16) | −0.2043 (7) | 0.4878 (4) | 0.0645 (17) | |
H16 | 0.1335 | −0.2595 | 0.5264 | 0.077* | |
C17 | 0.10612 (17) | −0.2764 (6) | 0.4261 (4) | 0.0678 (18) | |
H17 | 0.1077 | −0.3808 | 0.4214 | 0.081* | |
C18 | 0.08817 (15) | −0.1917 (6) | 0.3723 (3) | 0.0560 (16) | |
H18 | 0.0766 | −0.2378 | 0.3309 | 0.067* | |
C19 | 0.08739 (13) | −0.0390 (6) | 0.3799 (3) | 0.0428 (13) | |
H19 | 0.0750 | 0.0171 | 0.3427 | 0.051* | |
C20 | 0.27422 (15) | 0.5707 (6) | 0.4541 (3) | 0.0625 (17) | |
H20 | 0.2822 | 0.5715 | 0.5040 | 0.075* | |
C21 | 0.28014 (16) | 0.6987 (6) | 0.4121 (4) | 0.0709 (19) | |
H21 | 0.2917 | 0.7836 | 0.4335 | 0.085* | |
C22 | 0.26900 (14) | 0.6994 (6) | 0.3394 (3) | 0.0495 (14) | |
H22 | 0.2727 | 0.7842 | 0.3096 | 0.059* | |
C23 | 0.25230 (16) | 0.5732 (7) | 0.3113 (3) | 0.0612 (16) | |
H23 | 0.2443 | 0.5695 | 0.2614 | 0.073* | |
C24 | 0.24728 (15) | 0.4514 (6) | 0.3566 (3) | 0.0562 (15) | |
H24 | 0.2357 | 0.3658 | 0.3361 | 0.067* | |
O4 | 0.07741 (10) | 0.5704 (5) | 0.2203 (2) | 0.0882 (13) | |
H4C | 0.0751 | 0.5189 | 0.2601 | 0.106* | |
H4D | 0.0999 | 0.5533 | 0.2036 | 0.106* | |
N8 | 0.0000 | 0.8034 (18) | 0.2500 | 0.172 (5) | |
C25 | 0.0223 (3) | 0.8744 (16) | 0.2004 (7) | 0.159 (5) | |
H25 | 0.0367 | 0.8213 | 0.1657 | 0.191* | |
C26 | 0.0227 (5) | 1.0234 (17) | 0.2033 (11) | 0.222 (10) | |
H26 | 0.0394 | 1.0749 | 0.1719 | 0.266* | |
C27 | 0.0000 | 1.106 (3) | 0.2500 | 0.28 (3) | |
H27 | 0.0000 | 1.2110 | 0.2500 | 0.339* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.0281 (3) | 0.0351 (4) | 0.0305 (4) | 0.0010 (3) | 0.0041 (3) | 0.0008 (3) |
Ni2 | 0.0239 (4) | 0.0297 (5) | 0.0251 (5) | −0.0005 (4) | 0.0025 (3) | −0.0042 (4) |
S1 | 0.0323 (7) | 0.0486 (8) | 0.0336 (7) | 0.0086 (6) | 0.0070 (5) | −0.0043 (6) |
N1 | 0.024 (2) | 0.037 (2) | 0.0192 (19) | 0.0002 (18) | 0.0037 (15) | −0.0073 (18) |
N2 | 0.027 (2) | 0.030 (2) | 0.023 (2) | −0.0005 (16) | 0.0031 (17) | −0.0047 (18) |
N3 | 0.034 (2) | 0.053 (3) | 0.030 (2) | 0.001 (2) | 0.0039 (18) | −0.016 (2) |
N4 | 0.032 (2) | 0.050 (3) | 0.041 (3) | −0.002 (2) | 0.004 (2) | 0.000 (2) |
N5 | 0.036 (2) | 0.045 (3) | 0.034 (3) | −0.006 (2) | 0.0023 (19) | 0.001 (2) |
N6 | 0.031 (2) | 0.033 (2) | 0.033 (2) | 0.0000 (18) | 0.0058 (18) | 0.002 (2) |
O1 | 0.0252 (18) | 0.0301 (18) | 0.0309 (18) | 0.0012 (14) | 0.0002 (13) | −0.0051 (15) |
O2 | 0.041 (2) | 0.056 (2) | 0.034 (2) | 0.0098 (17) | 0.0117 (16) | 0.0110 (18) |
O3 | 0.083 (3) | 0.064 (3) | 0.065 (3) | 0.010 (2) | 0.036 (2) | 0.034 (2) |
C1 | 0.032 (3) | 0.026 (3) | 0.025 (3) | 0.006 (2) | 0.003 (2) | −0.005 (2) |
C2 | 0.029 (3) | 0.023 (3) | 0.031 (3) | −0.006 (2) | 0.002 (2) | 0.004 (2) |
C3 | 0.035 (3) | 0.058 (4) | 0.036 (3) | −0.001 (3) | −0.004 (3) | 0.009 (3) |
C4 | 0.024 (3) | 0.034 (3) | 0.021 (3) | −0.004 (2) | 0.0070 (19) | −0.009 (2) |
C5 | 0.029 (3) | 0.046 (3) | 0.023 (3) | −0.006 (2) | 0.007 (2) | −0.002 (2) |
C6 | 0.051 (4) | 0.072 (4) | 0.031 (3) | −0.010 (3) | −0.003 (2) | 0.000 (3) |
C7 | 0.068 (4) | 0.074 (5) | 0.035 (4) | −0.017 (3) | 0.000 (3) | −0.029 (3) |
C8 | 0.061 (4) | 0.050 (4) | 0.062 (4) | 0.002 (3) | −0.001 (3) | −0.029 (3) |
C9 | 0.039 (3) | 0.039 (3) | 0.039 (3) | 0.003 (2) | 0.005 (2) | −0.015 (3) |
C10 | 0.036 (3) | 0.082 (5) | 0.068 (4) | 0.007 (3) | 0.007 (3) | 0.016 (4) |
C11 | 0.036 (4) | 0.108 (6) | 0.092 (5) | 0.007 (4) | 0.020 (3) | 0.017 (4) |
C12 | 0.030 (4) | 0.100 (6) | 0.115 (6) | 0.014 (4) | 0.012 (4) | 0.000 (5) |
C13 | 0.044 (4) | 0.092 (5) | 0.093 (5) | 0.021 (4) | −0.009 (4) | 0.014 (4) |
C14 | 0.041 (3) | 0.062 (4) | 0.065 (4) | 0.003 (3) | 0.002 (3) | 0.010 (3) |
C15 | 0.051 (4) | 0.053 (4) | 0.039 (3) | −0.007 (3) | 0.000 (3) | 0.004 (3) |
C16 | 0.070 (4) | 0.045 (4) | 0.078 (5) | 0.001 (3) | 0.000 (3) | 0.022 (3) |
C17 | 0.078 (5) | 0.027 (3) | 0.099 (5) | −0.007 (3) | 0.019 (4) | 0.001 (4) |
C18 | 0.051 (4) | 0.048 (4) | 0.069 (4) | −0.018 (3) | 0.007 (3) | −0.014 (3) |
C19 | 0.035 (3) | 0.046 (4) | 0.047 (4) | −0.009 (2) | 0.005 (2) | −0.004 (3) |
C20 | 0.080 (4) | 0.048 (4) | 0.059 (4) | −0.016 (3) | −0.018 (3) | 0.005 (3) |
C21 | 0.085 (5) | 0.043 (4) | 0.084 (5) | −0.025 (3) | −0.019 (4) | 0.014 (4) |
C22 | 0.053 (4) | 0.043 (4) | 0.053 (4) | 0.002 (3) | 0.013 (3) | 0.018 (3) |
C23 | 0.076 (4) | 0.066 (4) | 0.042 (4) | −0.009 (3) | 0.001 (3) | 0.006 (3) |
C24 | 0.083 (4) | 0.051 (4) | 0.035 (3) | −0.021 (3) | 0.003 (3) | 0.004 (3) |
O4 | 0.077 (3) | 0.111 (4) | 0.076 (3) | 0.015 (3) | 0.011 (2) | 0.011 (3) |
N8 | 0.155 (14) | 0.194 (17) | 0.164 (15) | 0.000 | −0.023 (10) | 0.000 |
C25 | 0.157 (12) | 0.174 (12) | 0.146 (11) | −0.012 (11) | −0.020 (8) | 0.040 (11) |
C26 | 0.253 (18) | 0.17 (2) | 0.23 (2) | −0.107 (18) | −0.143 (14) | 0.094 (17) |
C27 | 0.46 (6) | 0.10 (2) | 0.28 (5) | 0.000 | −0.29 (4) | 0.000 |
Ni1—O2 | 1.992 (3) | C9—H9 | 0.9300 |
Ni1—N5 | 2.029 (4) | C10—C11 | 1.371 (6) |
Ni1—N1 | 2.037 (3) | C10—H10 | 0.9300 |
Ni1—N4 | 2.099 (4) | C11—C12 | 1.332 (8) |
Ni1—S1 | 2.2953 (13) | C11—H11 | 0.9300 |
Ni2—O1 | 2.032 (3) | C12—C13 | 1.371 (8) |
Ni2—O1i | 2.032 (3) | C12—H12 | 0.9300 |
Ni2—N2i | 2.057 (3) | C13—C14 | 1.379 (6) |
Ni2—N2 | 2.057 (3) | C13—H13 | 0.9300 |
Ni2—N6 | 2.194 (4) | C14—H14 | 0.9300 |
Ni2—N6i | 2.194 (4) | C15—C16 | 1.367 (7) |
S1—C1 | 1.742 (4) | C15—H15 | 0.9300 |
N1—C2 | 1.311 (5) | C16—C17 | 1.380 (7) |
N1—N2 | 1.408 (4) | C16—H16 | 0.9300 |
N2—C1 | 1.309 (5) | C17—C18 | 1.361 (7) |
N3—C1 | 1.342 (5) | C17—H17 | 0.9300 |
N3—H3A | 0.8600 | C18—C19 | 1.359 (6) |
N3—H3B | 0.8600 | C18—H18 | 0.9300 |
N4—C14 | 1.317 (6) | C19—H19 | 0.9300 |
N4—C10 | 1.334 (6) | C20—C21 | 1.377 (7) |
N5—C19 | 1.343 (5) | C20—H20 | 0.9300 |
N5—C15 | 1.343 (5) | C21—C22 | 1.351 (7) |
N6—C24 | 1.314 (5) | C21—H21 | 0.9300 |
N6—C20 | 1.317 (6) | C22—C23 | 1.350 (6) |
O1—C2 | 1.290 (4) | C22—H22 | 0.9300 |
O2—C3 | 1.283 (5) | C23—C24 | 1.362 (7) |
O3—C3 | 1.216 (5) | C23—H23 | 0.9300 |
C2—C4 | 1.492 (5) | C24—H24 | 0.9300 |
C3—C5 | 1.508 (6) | O4—H4C | 0.8501 |
C4—C9 | 1.374 (6) | O4—H4D | 0.8498 |
C4—C5 | 1.402 (6) | N8—C25ii | 1.338 (11) |
C5—C6 | 1.392 (6) | N8—C25 | 1.338 (11) |
C6—C7 | 1.373 (7) | C25—C26 | 1.320 (16) |
C6—H6 | 0.9300 | C25—H25 | 0.9300 |
C7—C8 | 1.381 (7) | C26—C27 | 1.366 (19) |
C7—H7 | 0.9300 | C26—H26 | 0.9300 |
C8—C9 | 1.374 (6) | C27—C26ii | 1.366 (19) |
C8—H8 | 0.9300 | C27—H27 | 0.9300 |
O2—Ni1—N5 | 113.67 (15) | C6—C7—H7 | 119.9 |
O2—Ni1—N1 | 92.23 (13) | C8—C7—H7 | 119.9 |
N5—Ni1—N1 | 91.89 (14) | C9—C8—C7 | 119.3 (5) |
O2—Ni1—N4 | 88.08 (14) | C9—C8—H8 | 120.3 |
N5—Ni1—N4 | 91.52 (15) | C7—C8—H8 | 120.3 |
N1—Ni1—N4 | 176.13 (14) | C4—C9—C8 | 121.6 (5) |
O2—Ni1—S1 | 132.18 (10) | C4—C9—H9 | 119.2 |
N5—Ni1—S1 | 114.10 (12) | C8—C9—H9 | 119.2 |
N1—Ni1—S1 | 83.98 (10) | N4—C10—C11 | 123.3 (5) |
N4—Ni1—S1 | 92.95 (11) | N4—C10—H10 | 118.4 |
O1—Ni2—O1i | 180.000 (1) | C11—C10—H10 | 118.4 |
O1—Ni2—N2i | 101.60 (12) | C12—C11—C10 | 120.1 (6) |
O1i—Ni2—N2i | 78.40 (12) | C12—C11—H11 | 120.0 |
O1—Ni2—N2 | 78.40 (12) | C10—C11—H11 | 120.0 |
O1i—Ni2—N2 | 101.60 (12) | C11—C12—C13 | 118.5 (6) |
N2i—Ni2—N2 | 180.000 (1) | C11—C12—H12 | 120.8 |
O1—Ni2—N6 | 89.26 (13) | C13—C12—H12 | 120.8 |
O1i—Ni2—N6 | 90.74 (13) | C12—C13—C14 | 118.2 (6) |
N2i—Ni2—N6 | 90.51 (13) | C12—C13—H13 | 120.9 |
N2—Ni2—N6 | 89.49 (13) | C14—C13—H13 | 120.9 |
O1—Ni2—N6i | 90.74 (13) | N4—C14—C13 | 124.3 (5) |
O1i—Ni2—N6i | 89.25 (13) | N4—C14—H14 | 117.9 |
N2i—Ni2—N6i | 89.49 (13) | C13—C14—H14 | 117.9 |
N2—Ni2—N6i | 90.51 (13) | N5—C15—C16 | 123.6 (5) |
N6—Ni2—N6i | 180.000 (1) | N5—C15—H15 | 118.2 |
C1—S1—Ni1 | 96.29 (15) | C16—C15—H15 | 118.2 |
C2—N1—N2 | 112.4 (3) | C15—C16—C17 | 118.6 (5) |
C2—N1—Ni1 | 127.9 (3) | C15—C16—H16 | 120.7 |
N2—N1—Ni1 | 119.5 (2) | C17—C16—H16 | 120.7 |
C1—N2—N1 | 115.3 (3) | C18—C17—C16 | 118.8 (5) |
C1—N2—Ni2 | 131.9 (3) | C18—C17—H17 | 120.6 |
N1—N2—Ni2 | 112.6 (2) | C16—C17—H17 | 120.6 |
C1—N3—H3A | 120.0 | C19—C18—C17 | 119.1 (5) |
C1—N3—H3B | 120.0 | C19—C18—H18 | 120.5 |
H3A—N3—H3B | 120.0 | C17—C18—H18 | 120.5 |
C14—N4—C10 | 115.7 (4) | N5—C19—C18 | 124.0 (5) |
C14—N4—Ni1 | 125.1 (4) | N5—C19—H19 | 118.0 |
C10—N4—Ni1 | 119.2 (4) | C18—C19—H19 | 118.0 |
C19—N5—C15 | 115.9 (4) | N6—C20—C21 | 123.5 (5) |
C19—N5—Ni1 | 122.0 (3) | N6—C20—H20 | 118.3 |
C15—N5—Ni1 | 120.8 (3) | C21—C20—H20 | 118.3 |
C24—N6—C20 | 115.9 (4) | C22—C21—C20 | 119.2 (5) |
C24—N6—Ni2 | 124.0 (3) | C22—C21—H21 | 120.4 |
C20—N6—Ni2 | 120.2 (3) | C20—C21—H21 | 120.4 |
C2—O1—Ni2 | 112.0 (3) | C23—C22—C21 | 117.9 (5) |
C3—O2—Ni1 | 126.4 (3) | C23—C22—H22 | 121.0 |
N2—C1—N3 | 118.3 (4) | C21—C22—H22 | 121.0 |
N2—C1—S1 | 124.6 (3) | C22—C23—C24 | 119.4 (5) |
N3—C1—S1 | 117.1 (3) | C22—C23—H23 | 120.3 |
O1—C2—N1 | 124.3 (4) | C24—C23—H23 | 120.3 |
O1—C2—C4 | 116.3 (4) | N6—C24—C23 | 124.2 (5) |
N1—C2—C4 | 119.3 (4) | N6—C24—H24 | 117.9 |
O3—C3—O2 | 124.1 (5) | C23—C24—H24 | 117.9 |
O3—C3—C5 | 119.8 (5) | H4C—O4—H4D | 107.3 |
O2—C3—C5 | 116.0 (4) | C25ii—N8—C25 | 124 (2) |
C9—C4—C5 | 119.1 (4) | C26—C25—N8 | 116.7 (19) |
C9—C4—C2 | 117.8 (4) | C26—C25—H25 | 121.6 |
C5—C4—C2 | 123.1 (4) | N8—C25—H25 | 121.6 |
C6—C5—C4 | 119.1 (5) | C25—C26—C27 | 123 (3) |
C6—C5—C3 | 116.8 (4) | C25—C26—H26 | 118.3 |
C4—C5—C3 | 124.1 (4) | C27—C26—H26 | 118.3 |
C7—C6—C5 | 120.6 (5) | C26ii—C27—C26 | 115 (3) |
C7—C6—H6 | 119.7 | C26ii—C27—H27 | 122.3 |
C5—C6—H6 | 119.7 | C26—C27—H27 | 122.3 |
C6—C7—C8 | 120.2 (5) | ||
O2—Ni1—S1—C1 | −83.36 (19) | N1—N2—C1—N3 | −178.5 (3) |
N5—Ni1—S1—C1 | 93.57 (18) | Ni2—N2—C1—N3 | 6.7 (6) |
N1—Ni1—S1—C1 | 4.19 (18) | N1—N2—C1—S1 | 2.2 (5) |
N4—Ni1—S1—C1 | −173.44 (18) | Ni2—N2—C1—S1 | −172.6 (2) |
O2—Ni1—N1—C2 | −58.4 (4) | Ni1—S1—C1—N2 | −4.9 (4) |
N5—Ni1—N1—C2 | 55.3 (4) | Ni1—S1—C1—N3 | 175.8 (3) |
N4—Ni1—N1—C2 | −153 (2) | Ni2—O1—C2—N1 | −5.8 (5) |
S1—Ni1—N1—C2 | 169.4 (4) | Ni2—O1—C2—C4 | 178.4 (3) |
O2—Ni1—N1—N2 | 127.7 (3) | N2—N1—C2—O1 | 1.4 (6) |
N5—Ni1—N1—N2 | −118.6 (3) | Ni1—N1—C2—O1 | −172.8 (3) |
N4—Ni1—N1—N2 | 33 (2) | N2—N1—C2—C4 | 177.1 (3) |
S1—Ni1—N1—N2 | −4.5 (3) | Ni1—N1—C2—C4 | 2.8 (6) |
C2—N1—N2—C1 | −172.1 (4) | Ni1—O2—C3—O3 | −143.0 (4) |
Ni1—N1—N2—C1 | 2.7 (4) | Ni1—O2—C3—C5 | 40.6 (6) |
C2—N1—N2—Ni2 | 3.7 (4) | O1—C2—C4—C9 | 45.9 (5) |
Ni1—N1—N2—Ni2 | 178.48 (16) | N1—C2—C4—C9 | −130.1 (4) |
O1—Ni2—N2—C1 | 169.9 (4) | O1—C2—C4—C5 | −130.6 (4) |
O1i—Ni2—N2—C1 | −10.1 (4) | N1—C2—C4—C5 | 53.4 (6) |
N2i—Ni2—N2—C1 | 34 (81) | C9—C4—C5—C6 | 0.3 (6) |
N6—Ni2—N2—C1 | −100.7 (4) | C2—C4—C5—C6 | 176.7 (4) |
N6i—Ni2—N2—C1 | 79.3 (4) | C9—C4—C5—C3 | 178.9 (4) |
O1—Ni2—N2—N1 | −5.0 (2) | C2—C4—C5—C3 | −4.7 (7) |
O1i—Ni2—N2—N1 | 175.0 (2) | O3—C3—C5—C6 | −70.0 (6) |
N2i—Ni2—N2—N1 | −141 (81) | O2—C3—C5—C6 | 106.5 (5) |
N6—Ni2—N2—N1 | 84.3 (3) | O3—C3—C5—C4 | 111.4 (6) |
N6i—Ni2—N2—N1 | −95.7 (3) | O2—C3—C5—C4 | −72.1 (6) |
O2—Ni1—N4—C14 | −15.1 (4) | C4—C5—C6—C7 | 1.7 (7) |
N5—Ni1—N4—C14 | −128.8 (4) | C3—C5—C6—C7 | −177.0 (5) |
N1—Ni1—N4—C14 | 80 (2) | C5—C6—C7—C8 | −1.7 (8) |
S1—Ni1—N4—C14 | 117.0 (4) | C6—C7—C8—C9 | −0.3 (8) |
O2—Ni1—N4—C10 | 166.0 (4) | C5—C4—C9—C8 | −2.4 (7) |
N5—Ni1—N4—C10 | 52.4 (4) | C2—C4—C9—C8 | −179.0 (4) |
N1—Ni1—N4—C10 | −99 (2) | C7—C8—C9—C4 | 2.4 (8) |
S1—Ni1—N4—C10 | −61.9 (4) | C14—N4—C10—C11 | −0.6 (8) |
O2—Ni1—N5—C19 | −22.5 (4) | Ni1—N4—C10—C11 | 178.3 (4) |
N1—Ni1—N5—C19 | −115.8 (3) | N4—C10—C11—C12 | 0.3 (10) |
N4—Ni1—N5—C19 | 66.1 (4) | C10—C11—C12—C13 | −0.1 (10) |
S1—Ni1—N5—C19 | 160.0 (3) | C11—C12—C13—C14 | 0.3 (10) |
O2—Ni1—N5—C15 | 143.8 (3) | C10—N4—C14—C13 | 0.9 (8) |
N1—Ni1—N5—C15 | 50.5 (4) | Ni1—N4—C14—C13 | −178.0 (4) |
N4—Ni1—N5—C15 | −127.7 (4) | C12—C13—C14—N4 | −0.8 (9) |
S1—Ni1—N5—C15 | −33.7 (4) | C19—N5—C15—C16 | 0.5 (7) |
O1—Ni2—N6—C24 | 4.2 (4) | Ni1—N5—C15—C16 | −166.6 (4) |
O1i—Ni2—N6—C24 | −175.8 (4) | N5—C15—C16—C17 | 1.4 (8) |
N2i—Ni2—N6—C24 | 105.8 (4) | C15—C16—C17—C18 | −2.5 (8) |
N2—Ni2—N6—C24 | −74.2 (4) | C16—C17—C18—C19 | 1.8 (8) |
N6i—Ni2—N6—C24 | 168 (100) | C15—N5—C19—C18 | −1.2 (7) |
O1—Ni2—N6—C20 | −175.2 (4) | Ni1—N5—C19—C18 | 165.7 (4) |
O1i—Ni2—N6—C20 | 4.8 (4) | C17—C18—C19—N5 | 0.1 (8) |
N2i—Ni2—N6—C20 | −73.6 (4) | C24—N6—C20—C21 | 0.5 (8) |
N2—Ni2—N6—C20 | 106.4 (4) | Ni2—N6—C20—C21 | 179.9 (4) |
N6i—Ni2—N6—C20 | −11 (100) | N6—C20—C21—C22 | −0.5 (9) |
O1i—Ni2—O1—C2 | 132 (100) | C20—C21—C22—C23 | 0.2 (8) |
N2i—Ni2—O1—C2 | −174.4 (3) | C21—C22—C23—C24 | 0.1 (8) |
N2—Ni2—O1—C2 | 5.6 (3) | C20—N6—C24—C23 | −0.2 (8) |
N6—Ni2—O1—C2 | −84.0 (3) | Ni2—N6—C24—C23 | −179.5 (4) |
N6i—Ni2—O1—C2 | 96.0 (3) | C22—C23—C24—N6 | −0.2 (9) |
N5—Ni1—O2—C3 | −63.3 (4) | C25ii—N8—C25—C26 | 2.2 (9) |
N1—Ni1—O2—C3 | 29.7 (4) | N8—C25—C26—C27 | −4.6 (18) |
N4—Ni1—O2—C3 | −154.1 (4) | C25—C26—C27—C26ii | 2.4 (10) |
S1—Ni1—O2—C3 | 113.6 (4) |
Symmetry codes: (i) −x+1/2, −y+1/2, −z+1; (ii) −x, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O1i | 0.86 | 2.10 | 2.913 (4) | 158 |
N3—H3B···O3iii | 0.86 | 2.13 | 2.975 (5) | 168 |
O4—H4C···O2 | 0.85 | 2.41 | 3.088 (5) | 137 |
O4—H4D···O3 | 0.85 | 2.35 | 3.020 (5) | 136 |
Symmetry codes: (i) −x+1/2, −y+1/2, −z+1; (iii) x, −y+1, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Ni3(C9H6N3O3S)2(C5H5N)6]·C5H5N·2H2O |
Mr | 1238.32 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 34.490 (3), 8.8510 (7), 17.8941 (16) |
β (°) | 90.912 (1) |
V (Å3) | 5461.9 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.17 |
Crystal size (mm) | 0.38 × 0.33 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.666, 0.844 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13285, 4808, 2586 |
Rint | 0.073 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.105, 0.99 |
No. of reflections | 4808 |
No. of parameters | 359 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.65, −0.47 |
Computer programs: SMART (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O1i | 0.86 | 2.10 | 2.913 (4) | 158 |
N3—H3B···O3ii | 0.86 | 2.13 | 2.975 (5) | 168 |
O4—H4C···O2 | 0.85 | 2.41 | 3.088 (5) | 137 |
O4—H4D···O3 | 0.85 | 2.35 | 3.020 (5) | 136 |
Symmetry codes: (i) −x+1/2, −y+1/2, −z+1; (ii) x, −y+1, z+1/2. |
Acknowledgements
This work was supported by the National Natural Science Foundation of China (Nos. 20671048, 21041002) and the Shandong Province Higher School Science and Technology Plan Projects (No. J10LB61).
References
Bruker (2007). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Shen, X., Wu, D. & Huang, X. (1997). Polyhedron, 16, 1477–1482. CSD CrossRef CAS Web of Science Google Scholar
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The asymmetric unit of the title complex contains a half complex, a water molecule and a half pyridine molecule (symmetry codes to generate second half of complex and pyridine are -x + 1/2,-y + 1/2,-z + 1 and -x, y, -z + 1/2, respectively). The three nickel atoms are linked together linearly by two µ2- bridged L groups. The central Ni2 atom is in a six-coordinated octahedral geometry with two pyridine molecules in axial positions and two amido-carbonyl oxygen atoms and two nitrogen atoms in the equatorial plane. The terminal Ni1 atom is coordinated in a trigonal-bipyramidal geometry composed of two nitrogen atoms from two pyridine molecules, one sulfur atom from the thiourea, one amido-carbonyl nitrogen atom, as well as one oxygen atom from the carboxylate. Thus, the carbonyl oxygen O1 and amine nitrogen N2 atoms of one ligand are bound to Ni2 forming a five-membered chelate ring, while the benzoyloxy oxygen O2, amine nitrogen N1 and sulfydryl sulfur S1 atoms are bound to terminal Ni1 atom forming a five-membered chelate ring and a seven-membered ring. The special position of the central Ni atom generates the linear organization of the three Ni atoms. The molecules further assemble into a one-dimensional network via intermolecular N—H···O hydrogen bonds (Table 1).