organic compounds
3,14-Dimethyl-2,6,13,17-tetraazatricyclo[16.4.0.07,12]docosane–(naphthalen-1-yl)methanol (1/2)
aDepartment of Chemistry, Andong National University, Andong 760-749, Republic of Korea, bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia, and cChemistry Department, Faculty of Science, King Abdulaziz University, PO Box 80203 Jeddah, Saudi Arabia
*Correspondence e-mail: seikweng@um.edu.my
In the title 20H40N4·2C11H10O, the macrocycle is generated by a crystallographic inversion centre. The N atoms show a pyramidal coordination, and the cyclohexane ring that is fused to the 14-membered C10N4 ring exists in a chair conformation, whereas the methyl substituent occupies an axial site. The (naphthalen-1-yl)methanol molecule forms an O—H⋯N hydrogen bond to a cyclam N atom. The mean-square-plane passing through the 14-membered ring is approximately coplanar with the naphthalene fused-ring [dihedral angle = 6.6 (1)°].
CExperimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2010); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S160053681105272X/hg5151sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681105272X/hg5151Isup2.hkl
Supporting information file. DOI: 10.1107/S160053681105272X/hg5151Isup3.cml
The macrocycle 3,14-dimethyl-2,6,13,17-tetraazatricyclo[16.4.0.07,12]docosane was synthesized by using a published procedure (Kang & Jeong, 2003). To a solution of this marcrocycle (0.61 g, 2.0 mmol) in methanol (10 ml) was added 1-chloromethylnaphthalene (0.80 g, 4.53 mmol) and a solution containing sodium carbonate (0.51 g, 4.77 mmol) dissolved in water (5 ml). The solution was heated for 24 h at 363 K. The white solid that precipitated was collected and recrystallized from acetonitrile–water (1:1) solution to give colorless crystals.
Carbon-bound H-atoms were placed in calculated positions [C–H 0.98 to 1.00 Å, Uiso(H) 1.2 to 1.5Ueq(C)] and were included in the
in the riding model approximation.The amino and hydroxy H-atoms were located in a difference Fourier map, and were refined with distance restraints of N–H 0.88±0.01, O–H 0.84±0.01 Å; their temperature factors were refined.
The (6 0 3) reflection was omitted.
Data collection: CrysAlis PRO (Agilent, 2010); cell
CrysAlis PRO (Agilent, 2010); data reduction: CrysAlis PRO (Agilent, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Thermal ellipsoid plot (Barbour, 2001) of C20H40N4.2C11H10O at the 70% probability level; hydrogen atoms are drawn as spheres of arbitrary radius. |
C20H40N4·2C11H10O | Z = 1 |
Mr = 652.94 | F(000) = 356 |
Triclinic, P1 | Dx = 1.228 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.9706 (4) Å | Cell parameters from 2968 reflections |
b = 9.4967 (6) Å | θ = 2.8–29.3° |
c = 10.5580 (5) Å | µ = 0.08 mm−1 |
α = 92.500 (4)° | T = 100 K |
β = 97.961 (4)° | Prism, colorless |
γ = 96.666 (4)° | 0.30 × 0.25 × 0.20 mm |
V = 883.13 (8) Å3 |
Agilent SuperNova Dual diffractometer with an Atlas detector | 3915 independent reflections |
Radiation source: SuperNova (Mo) X-ray Source | 2958 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.027 |
Detector resolution: 10.4041 pixels mm-1 | θmax = 27.5°, θmin = 2.8° |
ω scan | h = −11→11 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | k = −12→9 |
Tmin = 0.978, Tmax = 0.985 | l = −12→13 |
6926 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.126 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | w = 1/[σ2(Fo2) + (0.0516P)2 + 0.3587P] where P = (Fo2 + 2Fc2)/3 |
3915 reflections | (Δ/σ)max = 0.001 |
229 parameters | Δρmax = 0.29 e Å−3 |
3 restraints | Δρmin = −0.28 e Å−3 |
C20H40N4·2C11H10O | γ = 96.666 (4)° |
Mr = 652.94 | V = 883.13 (8) Å3 |
Triclinic, P1 | Z = 1 |
a = 8.9706 (4) Å | Mo Kα radiation |
b = 9.4967 (6) Å | µ = 0.08 mm−1 |
c = 10.5580 (5) Å | T = 100 K |
α = 92.500 (4)° | 0.30 × 0.25 × 0.20 mm |
β = 97.961 (4)° |
Agilent SuperNova Dual diffractometer with an Atlas detector | 3915 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | 2958 reflections with I > 2σ(I) |
Tmin = 0.978, Tmax = 0.985 | Rint = 0.027 |
6926 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 3 restraints |
wR(F2) = 0.126 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | Δρmax = 0.29 e Å−3 |
3915 reflections | Δρmin = −0.28 e Å−3 |
229 parameters |
x | y | z | Uiso*/Ueq | ||
O1 | 0.39115 (13) | 0.38946 (12) | 0.62565 (11) | 0.0246 (3) | |
N1 | 0.10202 (14) | 0.30725 (14) | 0.49130 (12) | 0.0167 (3) | |
N2 | 0.02690 (14) | 0.51309 (13) | 0.31361 (12) | 0.0169 (3) | |
C1 | 0.04567 (17) | 0.24648 (16) | 0.70859 (14) | 0.0187 (3) | |
H1A | 0.1503 | 0.2922 | 0.7383 | 0.022* | |
H1B | 0.0293 | 0.1613 | 0.7582 | 0.022* | |
C2 | 0.03614 (18) | 0.19676 (16) | 0.56804 (14) | 0.0195 (3) | |
H2A | 0.0903 | 0.1121 | 0.5622 | 0.023* | |
H2B | −0.0715 | 0.1684 | 0.5318 | 0.023* | |
C3 | 0.07600 (16) | 0.26812 (16) | 0.35267 (14) | 0.0165 (3) | |
H3 | −0.0335 | 0.2310 | 0.3268 | 0.020* | |
C4 | 0.17260 (18) | 0.15236 (17) | 0.32043 (15) | 0.0218 (3) | |
H4A | 0.2808 | 0.1862 | 0.3509 | 0.026* | |
H4B | 0.1442 | 0.0668 | 0.3663 | 0.026* | |
C5 | 0.1525 (2) | 0.11239 (18) | 0.17690 (16) | 0.0274 (4) | |
H5A | 0.2219 | 0.0422 | 0.1601 | 0.033* | |
H5B | 0.0473 | 0.0678 | 0.1481 | 0.033* | |
C6 | 0.18552 (19) | 0.24225 (18) | 0.10128 (15) | 0.0238 (4) | |
H6A | 0.1632 | 0.2150 | 0.0084 | 0.029* | |
H6B | 0.2943 | 0.2797 | 0.1216 | 0.029* | |
C7 | 0.08938 (17) | 0.35713 (17) | 0.13392 (14) | 0.0191 (3) | |
H7A | −0.0191 | 0.3223 | 0.1059 | 0.023* | |
H7B | 0.1155 | 0.4420 | 0.0865 | 0.023* | |
C8 | 0.11388 (16) | 0.39903 (16) | 0.27810 (14) | 0.0161 (3) | |
H8 | 0.2240 | 0.4336 | 0.3040 | 0.019* | |
C9 | 0.06375 (17) | 0.65060 (16) | 0.25732 (14) | 0.0178 (3) | |
H9 | 0.0493 | 0.6339 | 0.1620 | 0.021* | |
C10 | 0.22827 (17) | 0.71117 (17) | 0.30174 (16) | 0.0237 (4) | |
H10A | 0.2950 | 0.6423 | 0.2792 | 0.036* | |
H10B | 0.2441 | 0.7308 | 0.3948 | 0.036* | |
H10C | 0.2516 | 0.7994 | 0.2598 | 0.036* | |
C11 | 0.40299 (19) | 0.53897 (17) | 0.62006 (16) | 0.0249 (4) | |
H11A | 0.3248 | 0.5626 | 0.5512 | 0.030* | |
H11B | 0.5035 | 0.5735 | 0.5968 | 0.030* | |
C12 | 0.38426 (16) | 0.61640 (17) | 0.74368 (15) | 0.0201 (3) | |
C13 | 0.36862 (17) | 0.54546 (18) | 0.85219 (15) | 0.0220 (3) | |
H13 | 0.3698 | 0.4455 | 0.8498 | 0.026* | |
C14 | 0.35081 (18) | 0.61807 (19) | 0.96724 (16) | 0.0256 (4) | |
H14 | 0.3424 | 0.5668 | 1.0417 | 0.031* | |
C15 | 0.34556 (18) | 0.76033 (19) | 0.97311 (16) | 0.0257 (4) | |
H15 | 0.3314 | 0.8074 | 1.0510 | 0.031* | |
C16 | 0.36112 (17) | 0.83948 (17) | 0.86337 (15) | 0.0217 (3) | |
C17 | 0.35874 (19) | 0.98840 (19) | 0.86739 (17) | 0.0276 (4) | |
H17 | 0.3427 | 1.0366 | 0.9442 | 0.033* | |
C18 | 0.37914 (18) | 1.06392 (19) | 0.76259 (17) | 0.0291 (4) | |
H18 | 0.3779 | 1.1639 | 0.7669 | 0.035* | |
C19 | 0.40194 (18) | 0.99358 (18) | 0.64866 (16) | 0.0264 (4) | |
H19 | 0.4160 | 1.0463 | 0.5759 | 0.032* | |
C20 | 0.40408 (17) | 0.84951 (18) | 0.64119 (15) | 0.0230 (4) | |
H20 | 0.4200 | 0.8038 | 0.5632 | 0.028* | |
C21 | 0.38299 (16) | 0.76716 (17) | 0.74774 (15) | 0.0195 (3) | |
H1O | 0.3056 (15) | 0.356 (2) | 0.5834 (18) | 0.047 (6)* | |
H1N | 0.0599 (18) | 0.3847 (13) | 0.5061 (17) | 0.027 (5)* | |
H2N | −0.0694 (12) | 0.4833 (19) | 0.2849 (16) | 0.028 (5)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0249 (6) | 0.0183 (6) | 0.0294 (7) | 0.0014 (5) | 0.0008 (5) | 0.0018 (5) |
N1 | 0.0221 (6) | 0.0120 (6) | 0.0163 (6) | 0.0029 (5) | 0.0030 (5) | 0.0024 (5) |
N2 | 0.0185 (6) | 0.0132 (6) | 0.0196 (7) | 0.0028 (5) | 0.0039 (5) | 0.0028 (5) |
C1 | 0.0247 (8) | 0.0156 (8) | 0.0165 (8) | 0.0044 (6) | 0.0027 (6) | 0.0052 (6) |
C2 | 0.0259 (8) | 0.0125 (7) | 0.0207 (8) | 0.0022 (6) | 0.0053 (6) | 0.0023 (6) |
C3 | 0.0194 (7) | 0.0143 (7) | 0.0158 (7) | 0.0014 (6) | 0.0030 (5) | 0.0009 (6) |
C4 | 0.0312 (8) | 0.0166 (8) | 0.0200 (8) | 0.0076 (7) | 0.0069 (6) | 0.0041 (6) |
C5 | 0.0440 (10) | 0.0179 (8) | 0.0232 (9) | 0.0087 (7) | 0.0108 (7) | 0.0011 (7) |
C6 | 0.0338 (9) | 0.0210 (8) | 0.0192 (8) | 0.0080 (7) | 0.0085 (7) | 0.0024 (6) |
C7 | 0.0226 (8) | 0.0180 (8) | 0.0172 (8) | 0.0031 (6) | 0.0040 (6) | 0.0030 (6) |
C8 | 0.0176 (7) | 0.0134 (7) | 0.0177 (8) | 0.0031 (6) | 0.0032 (5) | 0.0016 (6) |
C9 | 0.0247 (8) | 0.0145 (7) | 0.0151 (7) | 0.0035 (6) | 0.0038 (6) | 0.0039 (6) |
C10 | 0.0258 (8) | 0.0174 (8) | 0.0288 (9) | 0.0025 (6) | 0.0063 (7) | 0.0047 (7) |
C11 | 0.0306 (9) | 0.0184 (8) | 0.0245 (9) | −0.0028 (7) | 0.0042 (7) | 0.0013 (7) |
C12 | 0.0142 (7) | 0.0213 (8) | 0.0233 (8) | −0.0010 (6) | 0.0000 (6) | 0.0016 (6) |
C13 | 0.0194 (8) | 0.0211 (8) | 0.0242 (8) | −0.0001 (6) | 0.0001 (6) | 0.0047 (6) |
C14 | 0.0229 (8) | 0.0310 (10) | 0.0224 (9) | −0.0009 (7) | 0.0026 (6) | 0.0079 (7) |
C15 | 0.0246 (8) | 0.0323 (10) | 0.0211 (9) | 0.0039 (7) | 0.0058 (6) | 0.0016 (7) |
C16 | 0.0168 (7) | 0.0243 (9) | 0.0248 (9) | 0.0058 (6) | 0.0025 (6) | 0.0020 (7) |
C17 | 0.0276 (9) | 0.0258 (9) | 0.0310 (9) | 0.0097 (7) | 0.0051 (7) | −0.0012 (7) |
C18 | 0.0266 (9) | 0.0209 (9) | 0.0400 (11) | 0.0090 (7) | 0.0002 (7) | 0.0032 (8) |
C19 | 0.0246 (8) | 0.0253 (9) | 0.0287 (9) | 0.0034 (7) | −0.0004 (7) | 0.0087 (7) |
C20 | 0.0211 (8) | 0.0241 (9) | 0.0227 (8) | 0.0009 (7) | 0.0006 (6) | 0.0018 (7) |
C21 | 0.0142 (7) | 0.0208 (8) | 0.0227 (8) | 0.0016 (6) | −0.0004 (6) | 0.0027 (6) |
O1—C11 | 1.4159 (19) | C8—H8 | 1.0000 |
O1—H1O | 0.852 (9) | C9—C10 | 1.522 (2) |
N1—C2 | 1.4730 (19) | C9—C1i | 1.529 (2) |
N1—C3 | 1.4739 (19) | C9—H9 | 1.0000 |
N1—H1N | 0.883 (9) | C10—H10A | 0.9800 |
N2—C8 | 1.4712 (19) | C10—H10B | 0.9800 |
N2—C9 | 1.4798 (19) | C10—H10C | 0.9800 |
N2—H2N | 0.884 (9) | C11—C12 | 1.509 (2) |
C1—C2 | 1.525 (2) | C11—H11A | 0.9900 |
C1—C9i | 1.529 (2) | C11—H11B | 0.9900 |
C1—H1A | 0.9900 | C12—C13 | 1.370 (2) |
C1—H1B | 0.9900 | C12—C21 | 1.432 (2) |
C2—H2A | 0.9900 | C13—C14 | 1.408 (2) |
C2—H2B | 0.9900 | C13—H13 | 0.9500 |
C3—C8 | 1.531 (2) | C14—C15 | 1.356 (2) |
C3—C4 | 1.531 (2) | C14—H14 | 0.9500 |
C3—H3 | 1.0000 | C15—C16 | 1.422 (2) |
C4—C5 | 1.527 (2) | C15—H15 | 0.9500 |
C4—H4A | 0.9900 | C16—C17 | 1.416 (2) |
C4—H4B | 0.9900 | C16—C21 | 1.423 (2) |
C5—C6 | 1.521 (2) | C17—C18 | 1.366 (3) |
C5—H5A | 0.9900 | C17—H17 | 0.9500 |
C5—H5B | 0.9900 | C18—C19 | 1.402 (2) |
C6—C7 | 1.523 (2) | C18—H18 | 0.9500 |
C6—H6A | 0.9900 | C19—C20 | 1.369 (2) |
C6—H6B | 0.9900 | C19—H19 | 0.9500 |
C7—C8 | 1.536 (2) | C20—C21 | 1.419 (2) |
C7—H7A | 0.9900 | C20—H20 | 0.9500 |
C7—H7B | 0.9900 | ||
C11—O1—H1O | 107.1 (15) | N2—C8—H8 | 107.7 |
C2—N1—C3 | 113.32 (11) | C3—C8—H8 | 107.7 |
C2—N1—H1N | 107.1 (12) | C7—C8—H8 | 107.7 |
C3—N1—H1N | 109.4 (12) | N2—C9—C10 | 110.88 (13) |
C8—N2—C9 | 115.46 (11) | N2—C9—C1i | 109.54 (12) |
C8—N2—H2N | 106.5 (12) | C10—C9—C1i | 111.64 (13) |
C9—N2—H2N | 106.9 (12) | N2—C9—H9 | 108.2 |
C2—C1—C9i | 117.65 (13) | C10—C9—H9 | 108.2 |
C2—C1—H1A | 107.9 | C1i—C9—H9 | 108.2 |
C9i—C1—H1A | 107.9 | C9—C10—H10A | 109.5 |
C2—C1—H1B | 107.9 | C9—C10—H10B | 109.5 |
C9i—C1—H1B | 107.9 | H10A—C10—H10B | 109.5 |
H1A—C1—H1B | 107.2 | C9—C10—H10C | 109.5 |
N1—C2—C1 | 112.57 (12) | H10A—C10—H10C | 109.5 |
N1—C2—H2A | 109.1 | H10B—C10—H10C | 109.5 |
C1—C2—H2A | 109.1 | O1—C11—C12 | 113.97 (13) |
N1—C2—H2B | 109.1 | O1—C11—H11A | 108.8 |
C1—C2—H2B | 109.1 | C12—C11—H11A | 108.8 |
H2A—C2—H2B | 107.8 | O1—C11—H11B | 108.8 |
N1—C3—C8 | 109.94 (11) | C12—C11—H11B | 108.8 |
N1—C3—C4 | 110.78 (13) | H11A—C11—H11B | 107.7 |
C8—C3—C4 | 109.82 (12) | C13—C12—C21 | 119.27 (15) |
N1—C3—H3 | 108.8 | C13—C12—C11 | 121.36 (15) |
C8—C3—H3 | 108.8 | C21—C12—C11 | 119.36 (14) |
C4—C3—H3 | 108.8 | C12—C13—C14 | 121.18 (16) |
C5—C4—C3 | 112.30 (14) | C12—C13—H13 | 119.4 |
C5—C4—H4A | 109.1 | C14—C13—H13 | 119.4 |
C3—C4—H4A | 109.1 | C15—C14—C13 | 120.84 (16) |
C5—C4—H4B | 109.1 | C15—C14—H14 | 119.6 |
C3—C4—H4B | 109.1 | C13—C14—H14 | 119.6 |
H4A—C4—H4B | 107.9 | C14—C15—C16 | 120.42 (15) |
C6—C5—C4 | 111.15 (13) | C14—C15—H15 | 119.8 |
C6—C5—H5A | 109.4 | C16—C15—H15 | 119.8 |
C4—C5—H5A | 109.4 | C17—C16—C15 | 121.61 (15) |
C6—C5—H5B | 109.4 | C17—C16—C21 | 119.41 (15) |
C4—C5—H5B | 109.4 | C15—C16—C21 | 118.96 (15) |
H5A—C5—H5B | 108.0 | C18—C17—C16 | 121.05 (16) |
C5—C6—C7 | 110.49 (13) | C18—C17—H17 | 119.5 |
C5—C6—H6A | 109.6 | C16—C17—H17 | 119.5 |
C7—C6—H6A | 109.6 | C17—C18—C19 | 119.87 (16) |
C5—C6—H6B | 109.6 | C17—C18—H18 | 120.1 |
C7—C6—H6B | 109.6 | C19—C18—H18 | 120.1 |
H6A—C6—H6B | 108.1 | C20—C19—C18 | 120.63 (16) |
C6—C7—C8 | 111.94 (13) | C20—C19—H19 | 119.7 |
C6—C7—H7A | 109.2 | C18—C19—H19 | 119.7 |
C8—C7—H7A | 109.2 | C19—C20—C21 | 121.27 (15) |
C6—C7—H7B | 109.2 | C19—C20—H20 | 119.4 |
C8—C7—H7B | 109.2 | C21—C20—H20 | 119.4 |
H7A—C7—H7B | 107.9 | C20—C21—C16 | 117.77 (15) |
N2—C8—C3 | 110.00 (11) | C20—C21—C12 | 122.93 (14) |
N2—C8—C7 | 113.85 (13) | C16—C21—C12 | 119.29 (15) |
C3—C8—C7 | 109.72 (12) | ||
C3—N1—C2—C1 | −172.40 (12) | C21—C12—C13—C14 | 0.2 (2) |
C9i—C1—C2—N1 | 74.70 (17) | C11—C12—C13—C14 | −179.85 (14) |
C2—N1—C3—C8 | 166.81 (12) | C12—C13—C14—C15 | 1.3 (2) |
C2—N1—C3—C4 | −71.62 (16) | C13—C14—C15—C16 | −1.3 (2) |
N1—C3—C4—C5 | −178.15 (12) | C14—C15—C16—C17 | −178.88 (15) |
C8—C3—C4—C5 | −56.50 (16) | C14—C15—C16—C21 | −0.3 (2) |
C3—C4—C5—C6 | 55.34 (18) | C15—C16—C17—C18 | 177.67 (15) |
C4—C5—C6—C7 | −54.34 (19) | C21—C16—C17—C18 | −0.9 (2) |
C5—C6—C7—C8 | 56.62 (17) | C16—C17—C18—C19 | 0.4 (2) |
C9—N2—C8—C3 | 174.49 (11) | C17—C18—C19—C20 | 0.0 (2) |
C9—N2—C8—C7 | −61.91 (16) | C18—C19—C20—C21 | 0.2 (2) |
N1—C3—C8—N2 | −55.05 (15) | C19—C20—C21—C16 | −0.7 (2) |
C4—C3—C8—N2 | −177.19 (12) | C19—C20—C21—C12 | 179.92 (14) |
N1—C3—C8—C7 | 178.97 (11) | C17—C16—C21—C20 | 1.0 (2) |
C4—C3—C8—C7 | 56.83 (16) | C15—C16—C21—C20 | −177.60 (14) |
C6—C7—C8—N2 | 178.14 (12) | C17—C16—C21—C12 | −179.56 (14) |
C6—C7—C8—C3 | −58.10 (16) | C15—C16—C21—C12 | 1.8 (2) |
C8—N2—C9—C10 | −62.00 (16) | C13—C12—C21—C20 | 177.61 (14) |
C8—N2—C9—C1i | 174.34 (12) | C11—C12—C21—C20 | −2.3 (2) |
O1—C11—C12—C13 | 4.5 (2) | C13—C12—C21—C16 | −1.8 (2) |
O1—C11—C12—C21 | −175.56 (13) | C11—C12—C21—C16 | 178.28 (13) |
Symmetry code: (i) −x, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1o···N1 | 0.85 (1) | 1.94 (1) | 2.786 (2) | 171 (2) |
Experimental details
Crystal data | |
Chemical formula | C20H40N4·2C11H10O |
Mr | 652.94 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 8.9706 (4), 9.4967 (6), 10.5580 (5) |
α, β, γ (°) | 92.500 (4), 97.961 (4), 96.666 (4) |
V (Å3) | 883.13 (8) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.30 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Agilent SuperNova Dual diffractometer with an Atlas detector |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2010) |
Tmin, Tmax | 0.978, 0.985 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6926, 3915, 2958 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.126, 1.00 |
No. of reflections | 3915 |
No. of parameters | 229 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.29, −0.28 |
Computer programs: CrysAlis PRO (Agilent, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1o···N1 | 0.85 (1) | 1.94 (1) | 2.786 (2) | 171 (2) |
Acknowledgements
We thank Andong National University and the University of Malaya for supporting this study.
References
Agilent (2010). CrysAlis PRO. Agilent Technologies, Yarnton, England. Google Scholar
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191. CrossRef CAS Google Scholar
Kang, S. G. & Jeong, J. H. (2003). Bull. Kor. Chem. Soc, 24, 393–396. CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
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We had intended to react the cyclam having 1,2-diaminocyclohexanediamine sub-units, 5,16-dimethyl-2,6,13,17-tetraazatricyclo[14,4,01,18,07,12]docosane, with an alkyl chloride to form the corresponding ammonium salt; however, under the basic conditions, the 1-chloromethyl-naphthalene component was hydrolyzed to 1-hydroxymethyl-naphthalene, which co-crystallizes with the cyclam (Scheme I, Fig. 1). The cyclam lies on a center-of-inversion, and the nitrogen atoms of the 14-membered C10N4 ring show pyramidal coordination. However, these are not enaged in any hydrogen-bonding interactions. The cyclohexane rings that are fused to the 14-membered ring exist in chair conformations, and the methyl substituents in axial configurations.
The 1-hydroxymethyl-naphthalene molecule forms an O–H···N hydrogen bond to the cyclam (Table 1).
The mean-square-plane passing through the 14-membered ring is approximately co-planar with the naphthalene fused-ring (dihedral angle 6.6 (1) °).