organic compounds
{2-[(3,5-Dimethyl-2H-pyrrol-2-ylidene-κN)(4-nitrophenyl)methyl]-3,5-dimethyl-1H-pyrrol-1-ido-κN}difluoridoboron
aKey Laboratory of Fine Petrochemical Technology, Changzhou University, Changzhou 213164, People's Republic of China
*Correspondence e-mail: aijuncui@yahoo.com
In an effort to discover novel and potential boron–dipyrromethene (BODIPY) dyes, the title compound, C19H18BF2N3O2, was prepared from 2,4-dimethylpyrrole, 4-nitrobenzaldehyde and BF3·Et2O in a one-pot reaction. There are two independent molecules, A and B, in the in which the dihedral angles between the benzene ring and boron–dipyrromethene mean plane have significantly different values [82.71 (8)° for molecule A and 73.16 (8)° for molecule B]. Intermolecular C—H⋯π interactions help to stabilize the crystal structure.
Related literature
For the use of related compounds in fluorescence analysis, see: Weiner et al. (2001); Gabe et al. (2004). For related structures, see: Euler et al. (2002a,b); Cui et al. (2006). For the synthetic procedure, see: Kollmannsberger et al. (1998).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell APEX2 and SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811052196/im2338sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811052196/im2338Isup2.hkl
Compound (I) was prepared from 2,4-dimethylpyrrole and p-nitrobenzaldehyde in a one-pot reaction (Kollmannsberger et al., 1998). General procedure: 4.5 mmol of 2,4-dimethylpyrrole and 2 mmol of the aldehyde were dissolved in 150 ml of absolute dichloromethane under nitrogen atmosphere. One drop of trifluoroacetic acid was added and the solution was stirred at room temperature until TLC-control showed complete consumption of the aldehyde. At this point, 2 mmol dichlorodicyanobenzoquinone (DDQ) was added, and stirring was continued for 10 min followed by addition of 4 ml of triethylamine and 4 ml of boron trifluoride etherate quickly. After stirring for another 2 h, the reaction mixture was washed with water and dried, and the solvent was evaporated. The residue was chromatographed twice on a silica column (the mixture of dichloromethane and hexane as eluted solvent). Total yield: 48%. Orange crystals. 1H NMR (CDCl3): δ 1.36 (s, 6H, CH3), 2.57 (s, 6H, CH3), 6.02 (s, 2H, CH), 7.55 (d, 2H, CH, J = 21 Hz), 8.40 (d, 2H, CH, J = 22 Hz). MS (ESI), m/z: 368.2 [M—H]-. HRMS: [M—H]- calculated: 368.1496, measured: 368.1472.
Red single crystals suitable for X-ray analysis were obtained by dissolving (I) (0.2 g) in a hexane/dichloromethane (15 ml, v:v: 1:3) mixture and slowly evaporating the solvent at room temperature for a period of about two weeks.
All H atoms bound to C atoms were assigned to calculated positions, with C—H = 0.96 Å (methyl) and 0.93 Å (aromatic), and refined using a riding model, with Uiso(H)=1.2Ueq (C).
Data collection: APEX2 (Bruker, 2007); cell
APEX2 and SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Molecular structure of the title compound with the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. Hydrogen atoms are omitted for clarity. |
C19H18BF2N3O2 | F(000) = 3072 |
Mr = 369.17 | Dx = 1.369 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 9250 reflections |
a = 30.5729 (6) Å | θ = 2.9–27.5° |
b = 11.8625 (2) Å | µ = 0.10 mm−1 |
c = 19.8975 (5) Å | T = 295 K |
β = 96.732 (1)° | Cuboid, red |
V = 7166.5 (3) Å3 | 0.60 × 0.31 × 0.12 mm |
Z = 16 |
Bruker APEXII CCD area-detector diffractometer | 6278 independent reflections |
Radiation source: fine-focus sealed tube | 4790 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
phi and ω scans | θmax = 25.0°, θmin = 1.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | h = −30→36 |
Tmin = 0.961, Tmax = 0.989 | k = −7→14 |
10802 measured reflections | l = −19→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.083 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.193 | H-atom parameters constrained |
S = 1.26 | w = 1/[σ2(Fo2) + (0.0295P)2 + 25.3515P] where P = (Fo2 + 2Fc2)/3 |
6278 reflections | (Δ/σ)max = 0.010 |
492 parameters | Δρmax = 0.27 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
C19H18BF2N3O2 | V = 7166.5 (3) Å3 |
Mr = 369.17 | Z = 16 |
Monoclinic, C2/c | Mo Kα radiation |
a = 30.5729 (6) Å | µ = 0.10 mm−1 |
b = 11.8625 (2) Å | T = 295 K |
c = 19.8975 (5) Å | 0.60 × 0.31 × 0.12 mm |
β = 96.732 (1)° |
Bruker APEXII CCD area-detector diffractometer | 6278 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 4790 reflections with I > 2σ(I) |
Tmin = 0.961, Tmax = 0.989 | Rint = 0.027 |
10802 measured reflections |
R[F2 > 2σ(F2)] = 0.083 | 0 restraints |
wR(F2) = 0.193 | H-atom parameters constrained |
S = 1.26 | w = 1/[σ2(Fo2) + (0.0295P)2 + 25.3515P] where P = (Fo2 + 2Fc2)/3 |
6278 reflections | Δρmax = 0.27 e Å−3 |
492 parameters | Δρmin = −0.26 e Å−3 |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F2 | 0.40972 (7) | 0.4438 (2) | 0.09898 (13) | 0.0572 (7) | |
F3 | 0.70073 (9) | 0.6621 (2) | 0.00916 (13) | 0.0657 (7) | |
F4 | 0.66392 (7) | 0.7021 (2) | 0.09842 (13) | 0.0587 (7) | |
F1 | 0.44996 (9) | 0.3905 (2) | 0.01603 (13) | 0.0635 (7) | |
N1 | 0.48764 (10) | 0.4758 (3) | 0.11631 (17) | 0.0435 (8) | |
N2 | 0.43918 (10) | 0.5886 (3) | 0.03340 (16) | 0.0409 (7) | |
N5 | 0.74189 (10) | 0.7350 (3) | 0.11064 (16) | 0.0416 (8) | |
N3 | 0.60065 (13) | 1.0688 (3) | 0.18716 (19) | 0.0551 (9) | |
N4 | 0.69020 (10) | 0.8575 (3) | 0.03739 (17) | 0.0456 (8) | |
C32 | 0.75062 (12) | 0.9378 (3) | 0.11245 (19) | 0.0390 (9) | |
C12 | 0.46331 (12) | 0.6856 (3) | 0.05529 (19) | 0.0412 (9) | |
C13 | 0.49862 (11) | 0.6774 (3) | 0.10695 (19) | 0.0375 (8) | |
O2 | 0.63489 (11) | 1.0849 (3) | 0.16285 (17) | 0.0702 (10) | |
O1 | 0.58641 (13) | 1.1319 (3) | 0.2283 (2) | 0.0891 (12) | |
C6 | 0.51053 (12) | 0.5738 (3) | 0.13813 (19) | 0.0404 (9) | |
C31 | 0.71389 (12) | 0.9519 (3) | 0.06439 (19) | 0.0434 (9) | |
C33 | 0.77694 (12) | 1.0395 (3) | 0.13595 (19) | 0.0414 (9) | |
C14 | 0.52499 (12) | 0.7800 (3) | 0.12746 (18) | 0.0387 (9) | |
N6 | 0.85035 (16) | 1.3323 (3) | 0.1947 (2) | 0.0703 (13) | |
C18 | 0.59202 (13) | 0.8870 (3) | 0.1283 (2) | 0.0460 (10) | |
H18A | 0.6203 | 0.8952 | 0.1160 | 0.055* | |
C21 | 0.80155 (13) | 0.7954 (4) | 0.1816 (2) | 0.0470 (10) | |
C17 | 0.57416 (13) | 0.9679 (3) | 0.16588 (19) | 0.0421 (9) | |
C19 | 0.56702 (12) | 0.7928 (3) | 0.1091 (2) | 0.0448 (9) | |
H19A | 0.5786 | 0.7371 | 0.0835 | 0.054* | |
C7 | 0.40959 (13) | 0.6181 (4) | −0.0198 (2) | 0.0492 (10) | |
O4 | 0.88462 (14) | 1.3493 (3) | 0.1696 (2) | 0.0955 (14) | |
C26 | 0.65831 (13) | 0.8948 (4) | −0.0104 (2) | 0.0539 (11) | |
C23 | 0.76288 (13) | 0.6440 (4) | 0.1387 (2) | 0.0486 (10) | |
C38 | 0.81430 (13) | 1.0667 (4) | 0.1053 (2) | 0.0478 (10) | |
H38A | 0.8230 | 1.0203 | 0.0716 | 0.057* | |
C25 | 0.76480 (12) | 0.8318 (3) | 0.1355 (2) | 0.0424 (9) | |
C36 | 0.82497 (14) | 1.2290 (3) | 0.1748 (2) | 0.0503 (10) | |
C10 | 0.44704 (13) | 0.7764 (4) | 0.0132 (2) | 0.0507 (10) | |
B1 | 0.44561 (14) | 0.4707 (4) | 0.0653 (2) | 0.0419 (10) | |
B2 | 0.69829 (14) | 0.7354 (4) | 0.0628 (2) | 0.0437 (11) | |
C37 | 0.83858 (13) | 1.1622 (4) | 0.1247 (2) | 0.0512 (11) | |
H37A | 0.8635 | 1.1808 | 0.1044 | 0.061* | |
C35 | 0.78890 (16) | 1.2029 (4) | 0.2069 (2) | 0.0605 (12) | |
H35A | 0.7808 | 1.2485 | 0.2414 | 0.073* | |
C4 | 0.50634 (14) | 0.3885 (4) | 0.1522 (2) | 0.0539 (11) | |
C28 | 0.66037 (14) | 1.0116 (4) | −0.0143 (2) | 0.0604 (13) | |
H28A | 0.6417 | 1.0567 | −0.0432 | 0.072* | |
C2 | 0.54438 (13) | 0.5435 (4) | 0.1908 (2) | 0.0496 (10) | |
C8 | 0.37869 (15) | 0.5364 (4) | −0.0570 (2) | 0.0629 (13) | |
H8A | 0.3682 | 0.4846 | −0.0255 | 0.094* | |
H8B | 0.3938 | 0.4955 | −0.0890 | 0.094* | |
H8C | 0.3542 | 0.5765 | −0.0806 | 0.094* | |
C16 | 0.53216 (14) | 0.9590 (4) | 0.1841 (2) | 0.0512 (10) | |
H16A | 0.5206 | 1.0158 | 0.2090 | 0.061* | |
C15 | 0.50768 (13) | 0.8643 (4) | 0.1649 (2) | 0.0496 (10) | |
H15A | 0.4794 | 0.8568 | 0.1770 | 0.060* | |
C3 | 0.54139 (14) | 0.4284 (4) | 0.1979 (2) | 0.0598 (12) | |
H3A | 0.5596 | 0.3843 | 0.2281 | 0.072* | |
C29 | 0.69449 (13) | 1.0504 (4) | 0.0315 (2) | 0.0512 (11) | |
C20 | 0.83614 (15) | 0.8649 (4) | 0.2222 (2) | 0.0633 (13) | |
H20A | 0.8532 | 0.8177 | 0.2545 | 0.095* | |
H20B | 0.8223 | 0.9233 | 0.2455 | 0.095* | |
H20C | 0.8551 | 0.8982 | 0.1925 | 0.095* | |
O3 | 0.83572 (15) | 1.3958 (3) | 0.2354 (2) | 0.0983 (14) | |
C22 | 0.79973 (13) | 0.6791 (4) | 0.1823 (2) | 0.0526 (11) | |
H22A | 0.8196 | 0.6319 | 0.2076 | 0.063* | |
C34 | 0.76472 (15) | 1.1072 (4) | 0.1870 (2) | 0.0547 (11) | |
H34A | 0.7401 | 1.0885 | 0.2081 | 0.066* | |
C9 | 0.41390 (14) | 0.7324 (4) | −0.0321 (2) | 0.0582 (12) | |
H9A | 0.3971 | 0.7730 | −0.0658 | 0.070* | |
C11 | 0.46221 (17) | 0.8973 (4) | 0.0132 (3) | 0.0782 (17) | |
H11A | 0.4487 | 0.9344 | −0.0268 | 0.117* | |
H11B | 0.4937 | 0.8995 | 0.0140 | 0.117* | |
H11C | 0.4540 | 0.9350 | 0.0526 | 0.117* | |
C27 | 0.62621 (15) | 0.8169 (5) | −0.0502 (2) | 0.0710 (14) | |
H27A | 0.6330 | 0.7403 | −0.0372 | 0.106* | |
H27B | 0.6283 | 0.8259 | −0.0976 | 0.106* | |
H27C | 0.5968 | 0.8346 | −0.0411 | 0.106* | |
C30 | 0.70618 (16) | 1.1719 (4) | 0.0431 (3) | 0.0757 (16) | |
H30A | 0.6892 | 1.2172 | 0.0096 | 0.114* | |
H30B | 0.7370 | 1.1824 | 0.0397 | 0.114* | |
H30C | 0.6998 | 1.1939 | 0.0873 | 0.114* | |
C5 | 0.48987 (17) | 0.2703 (4) | 0.1433 (3) | 0.0732 (15) | |
H5A | 0.4657 | 0.2680 | 0.1079 | 0.110* | |
H5B | 0.4802 | 0.2443 | 0.1848 | 0.110* | |
H5C | 0.5132 | 0.2225 | 0.1315 | 0.110* | |
C24 | 0.74717 (16) | 0.5255 (4) | 0.1245 (3) | 0.0674 (13) | |
H24A | 0.7167 | 0.5199 | 0.1311 | 0.101* | |
H24B | 0.7642 | 0.4746 | 0.1547 | 0.101* | |
H24C | 0.7507 | 0.5062 | 0.0785 | 0.101* | |
C1 | 0.57686 (15) | 0.6163 (4) | 0.2332 (2) | 0.0654 (13) | |
H1A | 0.5955 | 0.5698 | 0.2640 | 0.098* | |
H1B | 0.5614 | 0.6690 | 0.2583 | 0.098* | |
H1C | 0.5945 | 0.6565 | 0.2044 | 0.098* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F2 | 0.0406 (12) | 0.0610 (16) | 0.0716 (16) | −0.0079 (11) | 0.0130 (11) | 0.0080 (13) |
F3 | 0.0670 (16) | 0.0669 (17) | 0.0618 (16) | −0.0016 (14) | 0.0019 (13) | −0.0213 (14) |
F4 | 0.0402 (13) | 0.0596 (15) | 0.0777 (17) | −0.0075 (11) | 0.0129 (12) | 0.0030 (13) |
F1 | 0.0705 (17) | 0.0545 (15) | 0.0642 (16) | −0.0017 (13) | 0.0020 (13) | −0.0210 (13) |
N1 | 0.0387 (17) | 0.0398 (18) | 0.0515 (19) | −0.0023 (15) | 0.0027 (15) | −0.0001 (15) |
N2 | 0.0385 (17) | 0.0409 (18) | 0.0423 (18) | −0.0067 (14) | 0.0004 (14) | −0.0022 (14) |
N5 | 0.0382 (17) | 0.0434 (19) | 0.0441 (18) | −0.0041 (15) | 0.0088 (14) | −0.0029 (15) |
N3 | 0.060 (2) | 0.041 (2) | 0.059 (2) | −0.0081 (18) | −0.0122 (19) | 0.0037 (18) |
N4 | 0.0351 (17) | 0.055 (2) | 0.0464 (19) | −0.0046 (15) | 0.0038 (15) | 0.0011 (16) |
C32 | 0.0324 (19) | 0.046 (2) | 0.039 (2) | −0.0021 (17) | 0.0073 (16) | −0.0011 (17) |
C12 | 0.040 (2) | 0.041 (2) | 0.043 (2) | −0.0040 (17) | 0.0051 (17) | 0.0022 (17) |
C13 | 0.0322 (19) | 0.041 (2) | 0.040 (2) | −0.0045 (16) | 0.0052 (15) | −0.0044 (17) |
O2 | 0.065 (2) | 0.069 (2) | 0.075 (2) | −0.0318 (18) | 0.0029 (18) | 0.0075 (18) |
O1 | 0.088 (3) | 0.061 (2) | 0.116 (3) | −0.009 (2) | 0.005 (2) | −0.041 (2) |
C6 | 0.036 (2) | 0.042 (2) | 0.044 (2) | −0.0085 (17) | 0.0044 (16) | −0.0043 (17) |
C31 | 0.037 (2) | 0.050 (2) | 0.044 (2) | −0.0051 (18) | 0.0072 (17) | 0.0024 (19) |
C33 | 0.040 (2) | 0.040 (2) | 0.044 (2) | 0.0010 (17) | 0.0023 (17) | 0.0013 (18) |
C14 | 0.040 (2) | 0.040 (2) | 0.035 (2) | −0.0031 (17) | 0.0004 (16) | −0.0011 (17) |
N6 | 0.076 (3) | 0.047 (2) | 0.078 (3) | −0.006 (2) | −0.034 (2) | 0.003 (2) |
C18 | 0.036 (2) | 0.049 (2) | 0.053 (2) | −0.0078 (18) | 0.0051 (18) | −0.003 (2) |
C21 | 0.039 (2) | 0.056 (3) | 0.045 (2) | −0.0044 (19) | 0.0024 (17) | 0.006 (2) |
C17 | 0.050 (2) | 0.038 (2) | 0.037 (2) | −0.0085 (18) | −0.0024 (17) | −0.0003 (17) |
C19 | 0.037 (2) | 0.047 (2) | 0.051 (2) | −0.0042 (18) | 0.0086 (17) | −0.0099 (19) |
C7 | 0.044 (2) | 0.055 (3) | 0.047 (2) | −0.0107 (19) | −0.0028 (18) | 0.001 (2) |
O4 | 0.085 (3) | 0.080 (3) | 0.116 (3) | −0.035 (2) | −0.015 (3) | 0.012 (2) |
C26 | 0.040 (2) | 0.076 (3) | 0.045 (2) | −0.003 (2) | −0.0005 (18) | 0.008 (2) |
C23 | 0.043 (2) | 0.045 (2) | 0.058 (3) | 0.0049 (19) | 0.0096 (19) | 0.005 (2) |
C38 | 0.042 (2) | 0.052 (3) | 0.050 (2) | −0.0006 (19) | 0.0073 (18) | −0.003 (2) |
C25 | 0.041 (2) | 0.044 (2) | 0.042 (2) | −0.0020 (18) | 0.0044 (17) | −0.0018 (18) |
C36 | 0.050 (2) | 0.040 (2) | 0.057 (3) | −0.0040 (19) | −0.013 (2) | 0.001 (2) |
C10 | 0.045 (2) | 0.048 (2) | 0.058 (3) | −0.0070 (19) | −0.0022 (19) | 0.008 (2) |
B1 | 0.039 (2) | 0.042 (2) | 0.046 (3) | −0.007 (2) | 0.0058 (19) | −0.005 (2) |
B2 | 0.037 (2) | 0.047 (3) | 0.048 (3) | −0.005 (2) | 0.008 (2) | −0.011 (2) |
C37 | 0.039 (2) | 0.057 (3) | 0.057 (3) | −0.004 (2) | −0.0007 (19) | 0.003 (2) |
C35 | 0.070 (3) | 0.053 (3) | 0.057 (3) | 0.000 (2) | 0.003 (2) | −0.017 (2) |
C4 | 0.049 (2) | 0.042 (2) | 0.070 (3) | 0.0012 (19) | 0.004 (2) | 0.006 (2) |
C28 | 0.045 (2) | 0.076 (3) | 0.059 (3) | −0.002 (2) | −0.002 (2) | 0.026 (2) |
C2 | 0.039 (2) | 0.055 (3) | 0.052 (2) | −0.0047 (19) | −0.0040 (18) | 0.004 (2) |
C8 | 0.056 (3) | 0.070 (3) | 0.060 (3) | −0.019 (2) | −0.009 (2) | −0.003 (2) |
C16 | 0.057 (3) | 0.043 (2) | 0.056 (3) | −0.005 (2) | 0.015 (2) | −0.009 (2) |
C15 | 0.041 (2) | 0.051 (2) | 0.059 (3) | −0.0058 (19) | 0.0182 (19) | −0.004 (2) |
C3 | 0.050 (3) | 0.054 (3) | 0.071 (3) | 0.003 (2) | −0.007 (2) | 0.014 (2) |
C29 | 0.039 (2) | 0.059 (3) | 0.055 (3) | −0.002 (2) | 0.0039 (19) | 0.014 (2) |
C20 | 0.056 (3) | 0.062 (3) | 0.066 (3) | −0.008 (2) | −0.016 (2) | 0.007 (2) |
O3 | 0.117 (3) | 0.058 (2) | 0.111 (3) | −0.007 (2) | −0.025 (3) | −0.027 (2) |
C22 | 0.041 (2) | 0.057 (3) | 0.058 (3) | 0.000 (2) | 0.001 (2) | 0.012 (2) |
C34 | 0.057 (3) | 0.054 (3) | 0.055 (3) | −0.003 (2) | 0.017 (2) | −0.009 (2) |
C9 | 0.053 (3) | 0.062 (3) | 0.055 (3) | −0.009 (2) | −0.012 (2) | 0.016 (2) |
C11 | 0.077 (3) | 0.055 (3) | 0.094 (4) | −0.019 (3) | −0.026 (3) | 0.025 (3) |
C27 | 0.055 (3) | 0.094 (4) | 0.060 (3) | −0.015 (3) | −0.011 (2) | −0.001 (3) |
C30 | 0.059 (3) | 0.061 (3) | 0.102 (4) | −0.005 (2) | −0.009 (3) | 0.028 (3) |
C5 | 0.069 (3) | 0.045 (3) | 0.102 (4) | −0.001 (2) | −0.005 (3) | 0.011 (3) |
C24 | 0.066 (3) | 0.047 (3) | 0.088 (4) | −0.006 (2) | 0.006 (3) | 0.002 (3) |
C1 | 0.060 (3) | 0.069 (3) | 0.061 (3) | −0.008 (2) | −0.017 (2) | 0.008 (2) |
F2—B1 | 1.389 (5) | C23—C24 | 1.501 (6) |
F3—B2 | 1.385 (5) | C38—C37 | 1.385 (6) |
F4—B2 | 1.392 (5) | C38—H38A | 0.9300 |
F1—B1 | 1.383 (5) | C36—C35 | 1.373 (6) |
N1—C4 | 1.346 (5) | C36—C37 | 1.375 (6) |
N1—C6 | 1.400 (5) | C10—C9 | 1.378 (6) |
N1—B1 | 1.543 (5) | C10—C11 | 1.507 (6) |
N2—C7 | 1.355 (5) | C37—H37A | 0.9300 |
N2—C12 | 1.408 (5) | C35—C34 | 1.387 (6) |
N2—B1 | 1.539 (6) | C35—H35A | 0.9300 |
N5—C23 | 1.343 (5) | C4—C3 | 1.405 (6) |
N5—C25 | 1.404 (5) | C4—C5 | 1.494 (6) |
N5—B2 | 1.544 (5) | C28—C29 | 1.381 (6) |
N3—O2 | 1.219 (5) | C28—H28A | 0.9300 |
N3—O1 | 1.226 (5) | C2—C3 | 1.377 (6) |
N3—C17 | 1.479 (5) | C2—C1 | 1.498 (6) |
N4—C26 | 1.354 (5) | C8—H8A | 0.9600 |
N4—C31 | 1.406 (5) | C8—H8B | 0.9600 |
N4—B2 | 1.545 (6) | C8—H8C | 0.9600 |
C32—C31 | 1.397 (5) | C16—C15 | 1.379 (6) |
C32—C25 | 1.391 (5) | C16—H16A | 0.9300 |
C32—C33 | 1.494 (5) | C15—H15A | 0.9300 |
C12—C13 | 1.404 (5) | C3—H3A | 0.9300 |
C12—C10 | 1.419 (5) | C29—C30 | 1.496 (6) |
C13—C6 | 1.405 (5) | C20—H20A | 0.9600 |
C13—C14 | 1.490 (5) | C20—H20B | 0.9600 |
C6—C2 | 1.430 (5) | C20—H20C | 0.9600 |
C31—C29 | 1.432 (6) | C22—H22A | 0.9300 |
C33—C34 | 1.380 (6) | C34—H34A | 0.9300 |
C33—C38 | 1.394 (5) | C9—H9A | 0.9300 |
C14—C19 | 1.385 (5) | C11—H11A | 0.9600 |
C14—C15 | 1.388 (5) | C11—H11B | 0.9600 |
N6—O3 | 1.227 (6) | C11—H11C | 0.9600 |
N6—O4 | 1.229 (6) | C27—H27A | 0.9600 |
N6—C36 | 1.479 (6) | C27—H27B | 0.9600 |
C18—C17 | 1.369 (5) | C27—H27C | 0.9600 |
C18—C19 | 1.383 (5) | C30—H30A | 0.9600 |
C18—H18A | 0.9300 | C30—H30B | 0.9600 |
C21—C22 | 1.381 (6) | C30—H30C | 0.9600 |
C21—C25 | 1.432 (5) | C5—H5A | 0.9600 |
C21—C20 | 1.500 (6) | C5—H5B | 0.9600 |
C17—C16 | 1.379 (6) | C5—H5C | 0.9600 |
C19—H19A | 0.9300 | C24—H24A | 0.9600 |
C7—C9 | 1.387 (6) | C24—H24B | 0.9600 |
C7—C8 | 1.488 (6) | C24—H24C | 0.9600 |
C26—C28 | 1.390 (7) | C1—H1A | 0.9600 |
C26—C27 | 1.504 (6) | C1—H1B | 0.9600 |
C23—C22 | 1.403 (6) | C1—H1C | 0.9600 |
C4—N1—C6 | 108.0 (3) | C36—C37—C38 | 118.4 (4) |
C4—N1—B1 | 126.0 (3) | C36—C37—H37A | 120.8 |
C6—N1—B1 | 125.8 (3) | C38—C37—H37A | 120.8 |
C7—N2—C12 | 108.0 (3) | C36—C35—C34 | 118.8 (4) |
C7—N2—B1 | 126.7 (3) | C36—C35—H35A | 120.6 |
C12—N2—B1 | 125.3 (3) | C34—C35—H35A | 120.6 |
C23—N5—C25 | 108.4 (3) | N1—C4—C3 | 109.2 (4) |
C23—N5—B2 | 126.4 (3) | N1—C4—C5 | 122.9 (4) |
C25—N5—B2 | 125.0 (3) | C3—C4—C5 | 127.9 (4) |
O2—N3—O1 | 123.9 (4) | C29—C28—C26 | 109.3 (4) |
O2—N3—C17 | 118.7 (4) | C29—C28—H28A | 125.4 |
O1—N3—C17 | 117.4 (4) | C26—C28—H28A | 125.4 |
C26—N4—C31 | 107.7 (4) | C3—C2—C6 | 105.9 (4) |
C26—N4—B2 | 127.7 (4) | C3—C2—C1 | 124.1 (4) |
C31—N4—B2 | 124.5 (3) | C6—C2—C1 | 130.0 (4) |
C31—C32—C25 | 121.9 (4) | C7—C8—H8A | 109.5 |
C31—C32—C33 | 118.6 (3) | C7—C8—H8B | 109.5 |
C25—C32—C33 | 119.4 (3) | H8A—C8—H8B | 109.5 |
N2—C12—C13 | 120.0 (3) | C7—C8—H8C | 109.5 |
N2—C12—C10 | 107.7 (3) | H8A—C8—H8C | 109.5 |
C13—C12—C10 | 132.2 (4) | H8B—C8—H8C | 109.5 |
C6—C13—C12 | 121.4 (3) | C15—C16—C17 | 118.7 (4) |
C6—C13—C14 | 119.3 (3) | C15—C16—H16A | 120.6 |
C12—C13—C14 | 119.3 (3) | C17—C16—H16A | 120.6 |
C13—C6—N1 | 119.7 (3) | C16—C15—C14 | 120.5 (4) |
C13—C6—C2 | 132.2 (4) | C16—C15—H15A | 119.7 |
N1—C6—C2 | 108.1 (3) | C14—C15—H15A | 119.7 |
C32—C31—N4 | 120.2 (4) | C2—C3—C4 | 108.8 (4) |
C32—C31—C29 | 131.8 (4) | C2—C3—H3A | 125.6 |
N4—C31—C29 | 107.9 (3) | C4—C3—H3A | 125.6 |
C34—C33—C38 | 119.6 (4) | C28—C29—C31 | 105.7 (4) |
C34—C33—C32 | 121.2 (4) | C28—C29—C30 | 124.8 (4) |
C38—C33—C32 | 119.3 (4) | C31—C29—C30 | 129.5 (4) |
C19—C14—C15 | 119.1 (4) | C21—C20—H20A | 109.5 |
C19—C14—C13 | 120.4 (3) | C21—C20—H20B | 109.5 |
C15—C14—C13 | 120.5 (3) | H20A—C20—H20B | 109.5 |
O3—N6—O4 | 124.2 (5) | C21—C20—H20C | 109.5 |
O3—N6—C36 | 117.7 (5) | H20A—C20—H20C | 109.5 |
O4—N6—C36 | 118.2 (5) | H20B—C20—H20C | 109.5 |
C17—C18—C19 | 118.4 (4) | C21—C22—C23 | 108.7 (4) |
C17—C18—H18A | 120.8 | C21—C22—H22A | 125.7 |
C19—C18—H18A | 120.8 | C23—C22—H22A | 125.7 |
C22—C21—C25 | 106.2 (4) | C33—C34—C35 | 120.4 (4) |
C22—C21—C20 | 124.8 (4) | C33—C34—H34A | 119.8 |
C25—C21—C20 | 129.0 (4) | C35—C34—H34A | 119.8 |
C18—C17—C16 | 122.2 (4) | C10—C9—C7 | 109.4 (4) |
C18—C17—N3 | 118.9 (4) | C10—C9—H9A | 125.3 |
C16—C17—N3 | 118.8 (4) | C7—C9—H9A | 125.3 |
C18—C19—C14 | 121.1 (4) | C10—C11—H11A | 109.5 |
C18—C19—H19A | 119.5 | C10—C11—H11B | 109.5 |
C14—C19—H19A | 119.5 | H11A—C11—H11B | 109.5 |
N2—C7—C9 | 108.8 (4) | C10—C11—H11C | 109.5 |
N2—C7—C8 | 123.2 (4) | H11A—C11—H11C | 109.5 |
C9—C7—C8 | 128.0 (4) | H11B—C11—H11C | 109.5 |
N4—C26—C28 | 109.4 (4) | C26—C27—H27A | 109.5 |
N4—C26—C27 | 122.7 (4) | C26—C27—H27B | 109.5 |
C28—C26—C27 | 127.9 (4) | H27A—C27—H27B | 109.5 |
N5—C23—C22 | 109.2 (4) | C26—C27—H27C | 109.5 |
N5—C23—C24 | 123.2 (4) | H27A—C27—H27C | 109.5 |
C22—C23—C24 | 127.6 (4) | H27B—C27—H27C | 109.5 |
C37—C38—C33 | 120.5 (4) | C29—C30—H30A | 109.5 |
C37—C38—H38A | 119.8 | C29—C30—H30B | 109.5 |
C33—C38—H38A | 119.8 | H30A—C30—H30B | 109.5 |
C32—C25—N5 | 120.0 (3) | C29—C30—H30C | 109.5 |
C32—C25—C21 | 132.5 (4) | H30A—C30—H30C | 109.5 |
N5—C25—C21 | 107.5 (3) | H30B—C30—H30C | 109.5 |
C35—C36—C37 | 122.3 (4) | C4—C5—H5A | 109.5 |
C35—C36—N6 | 119.2 (4) | C4—C5—H5B | 109.5 |
C37—C36—N6 | 118.5 (4) | H5A—C5—H5B | 109.5 |
C9—C10—C12 | 106.2 (4) | C4—C5—H5C | 109.5 |
C9—C10—C11 | 124.3 (4) | H5A—C5—H5C | 109.5 |
C12—C10—C11 | 129.5 (4) | H5B—C5—H5C | 109.5 |
F2—B1—F1 | 109.4 (3) | C23—C24—H24A | 109.5 |
F2—B1—N2 | 109.7 (3) | C23—C24—H24B | 109.5 |
F1—B1—N2 | 110.6 (3) | H24A—C24—H24B | 109.5 |
F2—B1—N1 | 109.6 (3) | C23—C24—H24C | 109.5 |
F1—B1—N1 | 110.6 (3) | H24A—C24—H24C | 109.5 |
N2—B1—N1 | 106.9 (3) | H24B—C24—H24C | 109.5 |
F3—B2—F4 | 109.1 (3) | C2—C1—H1A | 109.5 |
F3—B2—N5 | 110.6 (3) | C2—C1—H1B | 109.5 |
F4—B2—N5 | 109.5 (3) | H1A—C1—H1B | 109.5 |
F3—B2—N4 | 110.9 (4) | C2—C1—H1C | 109.5 |
F4—B2—N4 | 109.3 (3) | H1A—C1—H1C | 109.5 |
N5—B2—N4 | 107.3 (3) | H1B—C1—H1C | 109.5 |
C7—N2—C12—C13 | −175.3 (4) | O4—N6—C36—C37 | −5.9 (6) |
B1—N2—C12—C13 | 5.0 (6) | N2—C12—C10—C9 | 0.2 (5) |
C7—N2—C12—C10 | 0.2 (4) | C13—C12—C10—C9 | 175.0 (4) |
B1—N2—C12—C10 | −179.4 (4) | N2—C12—C10—C11 | −177.7 (5) |
N2—C12—C13—C6 | −0.4 (6) | C13—C12—C10—C11 | −2.9 (8) |
C10—C12—C13—C6 | −174.7 (4) | C7—N2—B1—F2 | −70.0 (5) |
N2—C12—C13—C14 | 177.4 (3) | C12—N2—B1—F2 | 109.6 (4) |
C10—C12—C13—C14 | 3.1 (7) | C7—N2—B1—F1 | 50.8 (5) |
C12—C13—C6—N1 | 1.7 (6) | C12—N2—B1—F1 | −129.7 (4) |
C14—C13—C6—N1 | −176.1 (3) | C7—N2—B1—N1 | 171.2 (4) |
C12—C13—C6—C2 | −179.9 (4) | C12—N2—B1—N1 | −9.2 (5) |
C14—C13—C6—C2 | 2.3 (7) | C4—N1—B1—F2 | 65.3 (5) |
C4—N1—C6—C13 | 177.7 (4) | C6—N1—B1—F2 | −108.3 (4) |
B1—N1—C6—C13 | −7.8 (6) | C4—N1—B1—F1 | −55.4 (5) |
C4—N1—C6—C2 | −1.0 (5) | C6—N1—B1—F1 | 131.1 (4) |
B1—N1—C6—C2 | 173.5 (4) | C4—N1—B1—N2 | −175.8 (4) |
C25—C32—C31—N4 | −0.5 (6) | C6—N1—B1—N2 | 10.6 (5) |
C33—C32—C31—N4 | 175.4 (3) | C23—N5—B2—F3 | −52.3 (5) |
C25—C32—C31—C29 | −177.0 (4) | C25—N5—B2—F3 | 131.9 (4) |
C33—C32—C31—C29 | −1.2 (6) | C23—N5—B2—F4 | 67.9 (5) |
C26—N4—C31—C32 | −176.4 (4) | C25—N5—B2—F4 | −107.8 (4) |
B2—N4—C31—C32 | 7.4 (6) | C23—N5—B2—N4 | −173.5 (4) |
C26—N4—C31—C29 | 1.0 (4) | C25—N5—B2—N4 | 10.8 (5) |
B2—N4—C31—C29 | −175.3 (4) | C26—N4—B2—F3 | 52.0 (5) |
C31—C32—C33—C34 | 84.0 (5) | C31—N4—B2—F3 | −132.5 (4) |
C25—C32—C33—C34 | −100.1 (5) | C26—N4—B2—F4 | −68.3 (5) |
C31—C32—C33—C38 | −95.5 (4) | C31—N4—B2—F4 | 107.2 (4) |
C25—C32—C33—C38 | 80.4 (5) | C26—N4—B2—N5 | 173.0 (4) |
C6—C13—C14—C19 | 71.7 (5) | C31—N4—B2—N5 | −11.5 (5) |
C12—C13—C14—C19 | −106.2 (4) | C35—C36—C37—C38 | 1.4 (6) |
C6—C13—C14—C15 | −108.7 (4) | N6—C36—C37—C38 | −178.8 (4) |
C12—C13—C14—C15 | 73.4 (5) | C33—C38—C37—C36 | 0.1 (6) |
C19—C18—C17—C16 | −0.9 (6) | C37—C36—C35—C34 | −1.6 (7) |
C19—C18—C17—N3 | 179.6 (4) | N6—C36—C35—C34 | 178.6 (4) |
O2—N3—C17—C18 | 10.3 (5) | C6—N1—C4—C3 | 0.3 (5) |
O1—N3—C17—C18 | −170.1 (4) | B1—N1—C4—C3 | −174.1 (4) |
O2—N3—C17—C16 | −169.2 (4) | C6—N1—C4—C5 | 178.8 (4) |
O1—N3—C17—C16 | 10.4 (6) | B1—N1—C4—C5 | 4.3 (7) |
C17—C18—C19—C14 | −0.2 (6) | N4—C26—C28—C29 | 0.5 (6) |
C15—C14—C19—C18 | 1.0 (6) | C27—C26—C28—C29 | 179.3 (4) |
C13—C14—C19—C18 | −179.4 (4) | C13—C6—C2—C3 | −177.2 (4) |
C12—N2—C7—C9 | −0.6 (5) | N1—C6—C2—C3 | 1.3 (5) |
B1—N2—C7—C9 | 179.1 (4) | C13—C6—C2—C1 | 4.2 (8) |
C12—N2—C7—C8 | 178.9 (4) | N1—C6—C2—C1 | −177.3 (4) |
B1—N2—C7—C8 | −1.4 (6) | C18—C17—C16—C15 | 1.2 (6) |
C31—N4—C26—C28 | −0.9 (5) | N3—C17—C16—C15 | −179.3 (4) |
B2—N4—C26—C28 | 175.2 (4) | C17—C16—C15—C14 | −0.4 (6) |
C31—N4—C26—C27 | −179.8 (4) | C19—C14—C15—C16 | −0.7 (6) |
B2—N4—C26—C27 | −3.7 (7) | C13—C14—C15—C16 | 179.7 (4) |
C25—N5—C23—C22 | 0.1 (5) | C6—C2—C3—C4 | −1.1 (5) |
B2—N5—C23—C22 | −176.2 (4) | C1—C2—C3—C4 | 177.6 (4) |
C25—N5—C23—C24 | 179.0 (4) | N1—C4—C3—C2 | 0.5 (6) |
B2—N5—C23—C24 | 2.7 (6) | C5—C4—C3—C2 | −177.9 (5) |
C34—C33—C38—C37 | −1.4 (6) | C26—C28—C29—C31 | 0.1 (5) |
C32—C33—C38—C37 | 178.1 (4) | C26—C28—C29—C30 | −178.4 (5) |
C31—C32—C25—N5 | −0.3 (6) | C32—C31—C29—C28 | 176.2 (4) |
C33—C32—C25—N5 | −176.1 (3) | N4—C31—C29—C28 | −0.7 (5) |
C31—C32—C25—C21 | 177.4 (4) | C32—C31—C29—C30 | −5.3 (8) |
C33—C32—C25—C21 | 1.7 (7) | N4—C31—C29—C30 | 177.8 (5) |
C23—N5—C25—C32 | 177.8 (4) | C25—C21—C22—C23 | −0.6 (5) |
B2—N5—C25—C32 | −5.8 (6) | C20—C21—C22—C23 | 179.6 (4) |
C23—N5—C25—C21 | −0.5 (4) | N5—C23—C22—C21 | 0.3 (5) |
B2—N5—C25—C21 | 175.9 (3) | C24—C23—C22—C21 | −178.6 (4) |
C22—C21—C25—C32 | −177.4 (4) | C38—C33—C34—C35 | 1.2 (7) |
C20—C21—C25—C32 | 2.5 (8) | C32—C33—C34—C35 | −178.3 (4) |
C22—C21—C25—N5 | 0.6 (5) | C36—C35—C34—C33 | 0.3 (7) |
C20—C21—C25—N5 | −179.5 (4) | C12—C10—C9—C7 | −0.5 (5) |
O3—N6—C36—C35 | −6.1 (6) | C11—C10—C9—C7 | 177.5 (5) |
O4—N6—C36—C35 | 173.9 (4) | N2—C7—C9—C10 | 0.7 (5) |
O3—N6—C36—C37 | 174.1 (4) | C8—C7—C9—C10 | −178.8 (4) |
Cg1 and Cg2 are the centroids of the N4/C26/C28/C29/C31 and N5/C21–C23/C25 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C18—H18A···Cg1 | 0.93 | 2.93 | 3.784 (4) | 154 |
C35—H35A···Cg2i | 0.93 | 2.90 | 3.648 (5) | 139 |
Symmetry code: (i) −x+3/2, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C19H18BF2N3O2 |
Mr | 369.17 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 295 |
a, b, c (Å) | 30.5729 (6), 11.8625 (2), 19.8975 (5) |
β (°) | 96.732 (1) |
V (Å3) | 7166.5 (3) |
Z | 16 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.60 × 0.31 × 0.12 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2003) |
Tmin, Tmax | 0.961, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10802, 6278, 4790 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.083, 0.193, 1.26 |
No. of reflections | 6278 |
No. of parameters | 492 |
H-atom treatment | H-atom parameters constrained |
w = 1/[σ2(Fo2) + (0.0295P)2 + 25.3515P] where P = (Fo2 + 2Fc2)/3 | |
Δρmax, Δρmin (e Å−3) | 0.27, −0.26 |
Computer programs: APEX2 (Bruker, 2007), APEX2 and SAINT (Bruker, 2007), SAINT (Bruker, 2007), SHELXTL (Sheldrick, 2008).
Cg1 and Cg2 are the centroids of the N4/C26/C28/C29/C31 and N5/C21–C23/C25 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C18—H18A···Cg1 | 0.93 | 2.93 | 3.784 (4) | 154 |
C35—H35A···Cg2i | 0.93 | 2.90 | 3.648 (5) | 139 |
Symmetry code: (i) −x+3/2, y+1/2, −z+1/2. |
Acknowledgements
We gratefully acknowledge financial support from the Open Foundation of Jiangsu Province Key Laboratory of Fine Petrochemical Technology (KF1005) and the Analysis Center of Changzhou University.
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In the past few years, many novel boron-dipyrromethene (BODIPY) dyes were developed for fluorescence analysis (Weiner et al., 2001; Gabe et al., 2004) and their crystal structures were investigated at the same time (Euler et al., 2002a,b). As part of our ongoing studies of the substituent effect on the solid-state structures of BODIPY derivatives (Cui et al., 2006), we report herein the crystal strcuture of the title compound, 4,4-difluoro- 1,3,5,7-tetramethyl-8-(4'-nitrophenyl)-4-bora-3a,4a-diaza-s-indacene, (I).
The asymmetric unit of the title compound is shown in Fig. 1. There are two independent unique molecules [lablled A and B], in which the dihedral angles between the benzene ring and boron-dipyrromethene mean plane have significantly different values [82.71 (8)° for molecule A, 73.16 (8)° for molecule B]. In the crystal structure, there also exist intermolecular weak edge-to-face C—H···π [C18-H18A···Cg1i (Cg1 = N4, C26, C28, C29, C31): H18A···Cg1, 2.93 Å, C18···Cg1, 3.784 (4) Å, i = x, y, z; and C35-H35A···Cg2ii (Cg2 = N5, C21-C23, C25): H35A···Cg2, 2.90 Å, C35···Cg2, 3.648 (5) Å, i = -x + 3/2, y + 1/2, -z + 1/2 ] interactions, which help to reinforce the packing lattice.