organic compounds
(Z)-Ethyl 2-(2,4-dimethylbenzylidene)-7-methyl-3-oxo-5-phenyl-3,5-dihydro-2H-thiazolo[3,2-a]pyrimidine-6-carboxylate
aThe First Affiliated Hospital, Wenzhou Medical College, Wenzhou, Zhejiang Province 325035, People's Republic of China, and bInstitute of Biomedical Informatics/Zhejiang Provincial Key Laboratory of Medical Genetics, Wenzhou Medical College, Wenzhou, Zhejiang Province 325035, People's Republic of China
*Correspondence e-mail: feiyun_zheng@126.com
In the title compound, C25H24N2O3S, the dihedral angles between the thiazole ring and the phenyl and substituted benzene rings are 84.91 (11) and 11.58 (10)°, respectively. The dihydropyrimidine ring adopts a flattened boat conformation. The olefinic double bond is in a Z configuration.
Related literature
For related structures, see: Kulakov et al. (2009); Zhao et al. (2011). For background to the biological properties of fused pyrimidine derivatives, see: Al-Rashood & Abdel-Aziz (2010); Ashok et al. (2007); Jang et al. (2011); Wichmann et al. (1999).
Experimental
Crystal data
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Data collection: SMART (Bruker, 2002); cell SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811052925/rn2098sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811052925/rn2098Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811052925/rn2098Isup3.cml
In a one pot Biginelli reaction, a mixture of 5 mmol of benzaldehyde, 6 mmol ethyl acetoacetate, 7.5 mmol thiourea and 10 ml of EtOH was stirred at 50°C in presence of sulfamic acid catalyst for 3 h to obtain 6-methyl-4-phenyl-2-thioxo-1,2,3,4- tetrahydropyrimidine-5-carboxylate. Then the product (2 mmol) was reacted with ethyl chloroacetate (2 mmol) in the presence of pyridine for 4 h; and 2,4-dimethylbenzaldehyde (2 mmol) and piperidine were added, and the mixture refluxed for 4 h until the TLC assay indicated that the reaction was completed. The reaction mixture was cooled and filtered to give crude product. The solid was collected and crystallized from acetic acid to obtain the final product. Single crystals of the title compound were grown in a CH2Cl2/CH3OH mixture (2:1 v/v) by slow evaporation.
The H atoms were positioned geometrically (C—H = 0.93 and 0.96 Å) and refined as riding with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(methyl C).
Data collection: SMART (Bruker, 2002); cell
SAINT (Bruker, 2002); data reduction: SAINT (Bruker, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title compound, showing 30% displacement ellipsoids for the non-hydrogen atoms. Hydrogen atoms are drawn as spheres of arbitrary radius. |
C25H24N2O3S | F(000) = 912 |
Mr = 432.52 | Dx = 1.287 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 9.690 (5) Å | Cell parameters from 2729 reflections |
b = 10.620 (5) Å | θ = 5.4–56.3° |
c = 21.692 (12) Å | µ = 0.17 mm−1 |
β = 90.682 (10)° | T = 293 K |
V = 2232 (2) Å3 | Prismatic, green |
Z = 4 | 0.32 × 0.27 × 0.16 mm |
Bruker SMART CCD area-detector diffractometer | 4257 independent reflections |
Radiation source: fine-focus sealed tube | 3096 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
phi and ω scans | θmax = 26.0°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | h = −11→11 |
Tmin = 0.675, Tmax = 1.000 | k = −13→11 |
8761 measured reflections | l = −15→26 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.155 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0949P)2] where P = (Fo2 + 2Fc2)/3 |
4257 reflections | (Δ/σ)max = 0.003 |
284 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
C25H24N2O3S | V = 2232 (2) Å3 |
Mr = 432.52 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 9.690 (5) Å | µ = 0.17 mm−1 |
b = 10.620 (5) Å | T = 293 K |
c = 21.692 (12) Å | 0.32 × 0.27 × 0.16 mm |
β = 90.682 (10)° |
Bruker SMART CCD area-detector diffractometer | 4257 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | 3096 reflections with I > 2σ(I) |
Tmin = 0.675, Tmax = 1.000 | Rint = 0.026 |
8761 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 0 restraints |
wR(F2) = 0.155 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.31 e Å−3 |
4257 reflections | Δρmin = −0.26 e Å−3 |
284 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.39630 (6) | 0.68577 (5) | 1.02581 (2) | 0.0468 (2) | |
N1 | 0.51571 (17) | 0.71961 (14) | 0.92082 (7) | 0.0387 (4) | |
N2 | 0.58867 (19) | 0.85690 (16) | 1.00033 (8) | 0.0473 (4) | |
O1 | 0.43929 (16) | 0.55550 (13) | 0.86185 (6) | 0.0527 (4) | |
O2 | 0.8683 (2) | 1.0158 (2) | 0.86481 (10) | 0.0999 (7) | |
O3 | 0.78414 (18) | 0.86963 (17) | 0.80152 (7) | 0.0651 (5) | |
C1 | 0.4398 (2) | 0.61190 (18) | 0.91047 (9) | 0.0397 (5) | |
C2 | 0.3609 (2) | 0.57762 (18) | 0.96664 (9) | 0.0402 (5) | |
C3 | 0.5139 (2) | 0.76745 (18) | 0.97952 (9) | 0.0412 (5) | |
C4 | 0.6868 (2) | 0.90740 (19) | 0.95937 (10) | 0.0472 (5) | |
C5 | 0.6901 (2) | 0.87651 (19) | 0.89920 (10) | 0.0461 (5) | |
C6 | 0.5836 (2) | 0.78885 (18) | 0.87051 (9) | 0.0422 (5) | |
H6 | 0.6312 | 0.7281 | 0.8442 | 0.051* | |
C7 | 0.4768 (2) | 0.8581 (2) | 0.83166 (9) | 0.0440 (5) | |
C8 | 0.4347 (3) | 0.8122 (2) | 0.77469 (10) | 0.0634 (7) | |
H8 | 0.4738 | 0.7389 | 0.7592 | 0.076* | |
C9 | 0.3338 (3) | 0.8758 (3) | 0.74073 (11) | 0.0804 (9) | |
H9 | 0.3056 | 0.8445 | 0.7026 | 0.097* | |
C10 | 0.2761 (3) | 0.9832 (3) | 0.76279 (13) | 0.0779 (8) | |
H10 | 0.2089 | 1.0253 | 0.7398 | 0.093* | |
C11 | 0.3176 (3) | 1.0286 (3) | 0.81878 (13) | 0.0758 (8) | |
H11 | 0.2780 | 1.1018 | 0.8341 | 0.091* | |
C12 | 0.4174 (3) | 0.9670 (2) | 0.85291 (11) | 0.0588 (6) | |
H12 | 0.4451 | 0.9996 | 0.8909 | 0.071* | |
C13 | 0.7847 (3) | 0.9961 (2) | 0.99124 (12) | 0.0617 (6) | |
H13A | 0.8750 | 0.9871 | 0.9741 | 0.093* | |
H13B | 0.7883 | 0.9770 | 1.0345 | 0.093* | |
H13C | 0.7533 | 1.0811 | 0.9855 | 0.093* | |
C14 | 0.7908 (2) | 0.9298 (2) | 0.85547 (12) | 0.0584 (6) | |
C15 | 0.8700 (3) | 0.9143 (3) | 0.75156 (13) | 0.0813 (9) | |
H15A | 0.9639 | 0.9276 | 0.7661 | 0.098* | |
H15B | 0.8346 | 0.9933 | 0.7354 | 0.098* | |
C16 | 0.8664 (4) | 0.8162 (4) | 0.70314 (14) | 0.1146 (14) | |
H16A | 0.9010 | 0.7385 | 0.7198 | 0.172* | |
H16B | 0.9227 | 0.8420 | 0.6693 | 0.172* | |
H16C | 0.7730 | 0.8045 | 0.6889 | 0.172* | |
C17 | 0.2755 (2) | 0.47861 (18) | 0.96532 (9) | 0.0441 (5) | |
H17 | 0.2744 | 0.4352 | 0.9281 | 0.053* | |
C18 | 0.1845 (2) | 0.42670 (18) | 1.01130 (9) | 0.0431 (5) | |
C19 | 0.0866 (2) | 0.33502 (19) | 0.99376 (10) | 0.0473 (5) | |
C20 | −0.0026 (2) | 0.2895 (2) | 1.03827 (11) | 0.0540 (6) | |
H20 | −0.0680 | 0.2298 | 1.0265 | 0.065* | |
C21 | 0.0007 (2) | 0.3284 (2) | 1.09903 (11) | 0.0536 (6) | |
C22 | 0.0988 (3) | 0.4159 (2) | 1.11590 (11) | 0.0581 (6) | |
H22 | 0.1048 | 0.4426 | 1.1567 | 0.070* | |
C23 | 0.1885 (2) | 0.4647 (2) | 1.07309 (10) | 0.0531 (6) | |
H23 | 0.2533 | 0.5243 | 1.0856 | 0.064* | |
C24 | 0.0761 (3) | 0.2857 (2) | 0.92891 (11) | 0.0661 (7) | |
H24A | 0.0026 | 0.2253 | 0.9261 | 0.099* | |
H24B | 0.1615 | 0.2461 | 0.9180 | 0.099* | |
H24C | 0.0575 | 0.3541 | 0.9011 | 0.099* | |
C25 | −0.1005 (3) | 0.2774 (3) | 1.14450 (13) | 0.0756 (8) | |
H25A | −0.1877 | 0.3191 | 1.1390 | 0.113* | |
H25B | −0.0666 | 0.2920 | 1.1856 | 0.113* | |
H25C | −0.1121 | 0.1886 | 1.1380 | 0.113* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0540 (4) | 0.0431 (3) | 0.0435 (3) | −0.0012 (2) | 0.0112 (2) | −0.0006 (2) |
N1 | 0.0400 (10) | 0.0354 (8) | 0.0408 (8) | −0.0022 (7) | 0.0049 (7) | 0.0019 (7) |
N2 | 0.0497 (11) | 0.0405 (9) | 0.0519 (10) | −0.0045 (8) | 0.0026 (8) | −0.0055 (8) |
O1 | 0.0612 (10) | 0.0505 (8) | 0.0468 (8) | −0.0109 (8) | 0.0111 (7) | −0.0067 (7) |
O2 | 0.0972 (16) | 0.0951 (15) | 0.1080 (16) | −0.0585 (13) | 0.0217 (13) | −0.0015 (12) |
O3 | 0.0577 (11) | 0.0771 (11) | 0.0608 (10) | −0.0177 (9) | 0.0164 (8) | 0.0117 (9) |
C1 | 0.0376 (12) | 0.0378 (11) | 0.0438 (10) | 0.0017 (9) | 0.0021 (9) | 0.0017 (8) |
C2 | 0.0400 (12) | 0.0369 (10) | 0.0439 (10) | 0.0044 (9) | 0.0060 (9) | 0.0021 (8) |
C3 | 0.0415 (12) | 0.0366 (10) | 0.0456 (10) | 0.0046 (9) | 0.0022 (9) | −0.0005 (8) |
C4 | 0.0413 (12) | 0.0371 (11) | 0.0632 (13) | −0.0003 (9) | −0.0019 (10) | −0.0001 (9) |
C5 | 0.0373 (12) | 0.0406 (11) | 0.0603 (13) | −0.0037 (9) | 0.0015 (10) | 0.0049 (9) |
C6 | 0.0418 (12) | 0.0397 (10) | 0.0452 (10) | −0.0054 (9) | 0.0100 (9) | 0.0007 (8) |
C7 | 0.0407 (12) | 0.0499 (12) | 0.0415 (10) | −0.0111 (10) | 0.0068 (9) | 0.0074 (9) |
C8 | 0.0696 (18) | 0.0719 (16) | 0.0489 (12) | −0.0138 (14) | 0.0042 (12) | −0.0001 (11) |
C9 | 0.081 (2) | 0.114 (2) | 0.0459 (13) | −0.025 (2) | −0.0126 (13) | 0.0155 (15) |
C10 | 0.0650 (18) | 0.099 (2) | 0.0694 (17) | −0.0022 (17) | −0.0061 (14) | 0.0363 (16) |
C11 | 0.0722 (19) | 0.0745 (18) | 0.0805 (18) | 0.0164 (15) | −0.0016 (15) | 0.0167 (14) |
C12 | 0.0576 (15) | 0.0614 (15) | 0.0575 (13) | 0.0065 (12) | −0.0022 (11) | 0.0037 (11) |
C13 | 0.0550 (15) | 0.0507 (13) | 0.0792 (16) | −0.0102 (11) | −0.0052 (12) | −0.0043 (12) |
C14 | 0.0442 (14) | 0.0568 (14) | 0.0743 (16) | −0.0075 (12) | 0.0021 (12) | 0.0128 (12) |
C15 | 0.0662 (18) | 0.104 (2) | 0.0741 (17) | −0.0152 (16) | 0.0208 (14) | 0.0375 (16) |
C16 | 0.136 (3) | 0.149 (3) | 0.0596 (17) | −0.023 (3) | 0.036 (2) | 0.0160 (19) |
C17 | 0.0451 (12) | 0.0391 (11) | 0.0481 (11) | 0.0002 (9) | 0.0053 (9) | 0.0026 (9) |
C18 | 0.0418 (12) | 0.0353 (10) | 0.0522 (11) | 0.0026 (9) | 0.0071 (9) | 0.0063 (9) |
C19 | 0.0460 (13) | 0.0367 (10) | 0.0593 (12) | 0.0020 (9) | 0.0045 (10) | 0.0072 (9) |
C20 | 0.0431 (13) | 0.0434 (12) | 0.0756 (15) | −0.0036 (10) | 0.0054 (11) | 0.0103 (11) |
C21 | 0.0441 (14) | 0.0498 (13) | 0.0672 (14) | 0.0066 (11) | 0.0131 (11) | 0.0167 (11) |
C22 | 0.0598 (15) | 0.0613 (14) | 0.0533 (13) | −0.0009 (12) | 0.0116 (11) | 0.0082 (11) |
C23 | 0.0547 (14) | 0.0499 (12) | 0.0548 (12) | −0.0096 (11) | 0.0084 (10) | 0.0041 (10) |
C24 | 0.0727 (18) | 0.0569 (14) | 0.0688 (15) | −0.0175 (13) | 0.0074 (13) | −0.0034 (12) |
C25 | 0.0597 (17) | 0.0840 (18) | 0.0836 (18) | −0.0012 (15) | 0.0216 (14) | 0.0293 (15) |
S1—C2 | 1.753 (2) | C12—H12 | 0.9300 |
S1—C3 | 1.757 (2) | C13—H13A | 0.9600 |
N1—C3 | 1.371 (3) | C13—H13B | 0.9600 |
N1—C1 | 1.377 (3) | C13—H13C | 0.9600 |
N1—C6 | 1.477 (2) | C15—C16 | 1.480 (4) |
N2—C3 | 1.274 (3) | C15—H15A | 0.9700 |
N2—C4 | 1.415 (3) | C15—H15B | 0.9700 |
O1—C1 | 1.213 (2) | C16—H16A | 0.9600 |
O2—C14 | 1.198 (3) | C16—H16B | 0.9600 |
O3—C14 | 1.334 (3) | C16—H16C | 0.9600 |
O3—C15 | 1.454 (3) | C17—C18 | 1.448 (3) |
C1—C2 | 1.491 (3) | C17—H17 | 0.9300 |
C2—C17 | 1.338 (3) | C18—C23 | 1.400 (3) |
C4—C5 | 1.347 (3) | C18—C19 | 1.409 (3) |
C4—C13 | 1.500 (3) | C19—C20 | 1.390 (3) |
C5—C14 | 1.481 (3) | C19—C24 | 1.504 (3) |
C5—C6 | 1.518 (3) | C20—C21 | 1.381 (3) |
C6—C7 | 1.517 (3) | C20—H20 | 0.9300 |
C6—H6 | 0.9800 | C21—C22 | 1.376 (3) |
C7—C12 | 1.374 (3) | C21—C25 | 1.501 (3) |
C7—C8 | 1.385 (3) | C22—C23 | 1.380 (3) |
C8—C9 | 1.392 (4) | C22—H22 | 0.9300 |
C8—H8 | 0.9300 | C23—H23 | 0.9300 |
C9—C10 | 1.360 (4) | C24—H24A | 0.9600 |
C9—H9 | 0.9300 | C24—H24B | 0.9600 |
C10—C11 | 1.363 (4) | C24—H24C | 0.9600 |
C10—H10 | 0.9300 | C25—H25A | 0.9600 |
C11—C12 | 1.377 (3) | C25—H25B | 0.9600 |
C11—H11 | 0.9300 | C25—H25C | 0.9600 |
C2—S1—C3 | 91.59 (10) | H13B—C13—H13C | 109.5 |
C3—N1—C1 | 116.53 (16) | O2—C14—O3 | 122.5 (2) |
C3—N1—C6 | 120.82 (16) | O2—C14—C5 | 126.8 (2) |
C1—N1—C6 | 122.33 (16) | O3—C14—C5 | 110.7 (2) |
C3—N2—C4 | 116.34 (17) | O3—C15—C16 | 106.9 (2) |
C14—O3—C15 | 118.4 (2) | O3—C15—H15A | 110.3 |
O1—C1—N1 | 123.26 (18) | C16—C15—H15A | 110.3 |
O1—C1—C2 | 126.39 (19) | O3—C15—H15B | 110.3 |
N1—C1—C2 | 110.34 (16) | C16—C15—H15B | 110.3 |
C17—C2—C1 | 119.81 (18) | H15A—C15—H15B | 108.6 |
C17—C2—S1 | 130.25 (16) | C15—C16—H16A | 109.5 |
C1—C2—S1 | 109.90 (14) | C15—C16—H16B | 109.5 |
N2—C3—N1 | 126.29 (19) | H16A—C16—H16B | 109.5 |
N2—C3—S1 | 122.38 (16) | C15—C16—H16C | 109.5 |
N1—C3—S1 | 111.30 (15) | H16A—C16—H16C | 109.5 |
C5—C4—N2 | 122.71 (19) | H16B—C16—H16C | 109.5 |
C5—C4—C13 | 125.3 (2) | C2—C17—C18 | 131.74 (19) |
N2—C4—C13 | 112.00 (19) | C2—C17—H17 | 114.1 |
C4—C5—C14 | 123.4 (2) | C18—C17—H17 | 114.1 |
C4—C5—C6 | 121.52 (19) | C23—C18—C19 | 117.94 (19) |
C14—C5—C6 | 114.95 (19) | C23—C18—C17 | 122.7 (2) |
N1—C6—C7 | 110.19 (17) | C19—C18—C17 | 119.39 (19) |
N1—C6—C5 | 108.00 (16) | C20—C19—C18 | 118.4 (2) |
C7—C6—C5 | 112.74 (17) | C20—C19—C24 | 119.5 (2) |
N1—C6—H6 | 108.6 | C18—C19—C24 | 122.1 (2) |
C7—C6—H6 | 108.6 | C21—C20—C19 | 123.4 (2) |
C5—C6—H6 | 108.6 | C21—C20—H20 | 118.3 |
C12—C7—C8 | 118.4 (2) | C19—C20—H20 | 118.3 |
C12—C7—C6 | 120.47 (18) | C22—C21—C20 | 117.6 (2) |
C8—C7—C6 | 121.1 (2) | C22—C21—C25 | 121.6 (2) |
C7—C8—C9 | 119.9 (3) | C20—C21—C25 | 120.7 (2) |
C7—C8—H8 | 120.0 | C21—C22—C23 | 120.9 (2) |
C9—C8—H8 | 120.0 | C21—C22—H22 | 119.6 |
C10—C9—C8 | 120.7 (3) | C23—C22—H22 | 119.6 |
C10—C9—H9 | 119.7 | C22—C23—C18 | 121.7 (2) |
C8—C9—H9 | 119.7 | C22—C23—H23 | 119.1 |
C9—C10—C11 | 119.5 (3) | C18—C23—H23 | 119.1 |
C9—C10—H10 | 120.3 | C19—C24—H24A | 109.5 |
C11—C10—H10 | 120.3 | C19—C24—H24B | 109.5 |
C10—C11—C12 | 120.6 (3) | H24A—C24—H24B | 109.5 |
C10—C11—H11 | 119.7 | C19—C24—H24C | 109.5 |
C12—C11—H11 | 119.7 | H24A—C24—H24C | 109.5 |
C7—C12—C11 | 120.9 (2) | H24B—C24—H24C | 109.5 |
C7—C12—H12 | 119.5 | C21—C25—H25A | 109.5 |
C11—C12—H12 | 119.5 | C21—C25—H25B | 109.5 |
C4—C13—H13A | 109.5 | H25A—C25—H25B | 109.5 |
C4—C13—H13B | 109.5 | C21—C25—H25C | 109.5 |
H13A—C13—H13B | 109.5 | H25A—C25—H25C | 109.5 |
C4—C13—H13C | 109.5 | H25B—C25—H25C | 109.5 |
H13A—C13—H13C | 109.5 | ||
C3—N1—C1—O1 | −175.24 (19) | N1—C6—C7—C8 | −102.7 (2) |
C6—N1—C1—O1 | 11.3 (3) | C5—C6—C7—C8 | 136.6 (2) |
C3—N1—C1—C2 | 5.0 (2) | C12—C7—C8—C9 | −0.5 (3) |
C6—N1—C1—C2 | −168.54 (17) | C6—C7—C8—C9 | 178.3 (2) |
O1—C1—C2—C17 | −2.7 (3) | C7—C8—C9—C10 | 0.2 (4) |
N1—C1—C2—C17 | 177.07 (17) | C8—C9—C10—C11 | −0.1 (4) |
O1—C1—C2—S1 | 179.15 (18) | C9—C10—C11—C12 | 0.2 (4) |
N1—C1—C2—S1 | −1.1 (2) | C8—C7—C12—C11 | 0.6 (3) |
C3—S1—C2—C17 | −180.0 (2) | C6—C7—C12—C11 | −178.1 (2) |
C3—S1—C2—C1 | −2.08 (15) | C10—C11—C12—C7 | −0.5 (4) |
C4—N2—C3—N1 | −2.9 (3) | C15—O3—C14—O2 | −2.9 (4) |
C4—N2—C3—S1 | 174.98 (15) | C15—O3—C14—C5 | 176.3 (2) |
C1—N1—C3—N2 | 171.51 (19) | C4—C5—C14—O2 | −10.0 (4) |
C6—N1—C3—N2 | −14.9 (3) | C6—C5—C14—O2 | 166.5 (2) |
C1—N1—C3—S1 | −6.6 (2) | C4—C5—C14—O3 | 170.8 (2) |
C6—N1—C3—S1 | 166.99 (14) | C6—C5—C14—O3 | −12.6 (3) |
C2—S1—C3—N2 | −173.40 (18) | C14—O3—C15—C16 | 167.7 (3) |
C2—S1—C3—N1 | 4.81 (15) | C1—C2—C17—C18 | −177.9 (2) |
C3—N2—C4—C5 | 9.0 (3) | S1—C2—C17—C18 | −0.2 (4) |
C3—N2—C4—C13 | −170.39 (18) | C2—C17—C18—C23 | −11.2 (4) |
N2—C4—C5—C14 | 179.09 (19) | C2—C17—C18—C19 | 168.2 (2) |
C13—C4—C5—C14 | −1.6 (4) | C23—C18—C19—C20 | 1.5 (3) |
N2—C4—C5—C6 | 2.8 (3) | C17—C18—C19—C20 | −177.96 (19) |
C13—C4—C5—C6 | −178.0 (2) | C23—C18—C19—C24 | −178.5 (2) |
C3—N1—C6—C7 | −100.3 (2) | C17—C18—C19—C24 | 2.0 (3) |
C1—N1—C6—C7 | 73.0 (2) | C18—C19—C20—C21 | −0.8 (3) |
C3—N1—C6—C5 | 23.3 (3) | C24—C19—C20—C21 | 179.2 (2) |
C1—N1—C6—C5 | −163.48 (17) | C19—C20—C21—C22 | −0.6 (3) |
C4—C5—C6—N1 | −17.7 (3) | C19—C20—C21—C25 | 178.7 (2) |
C14—C5—C6—N1 | 165.70 (18) | C20—C21—C22—C23 | 1.3 (3) |
C4—C5—C6—C7 | 104.3 (2) | C25—C21—C22—C23 | −178.0 (2) |
C14—C5—C6—C7 | −72.3 (2) | C21—C22—C23—C18 | −0.6 (4) |
N1—C6—C7—C12 | 76.0 (2) | C19—C18—C23—C22 | −0.9 (3) |
C5—C6—C7—C12 | −44.7 (3) | C17—C18—C23—C22 | 178.6 (2) |
Experimental details
Crystal data | |
Chemical formula | C25H24N2O3S |
Mr | 432.52 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 9.690 (5), 10.620 (5), 21.692 (12) |
β (°) | 90.682 (10) |
V (Å3) | 2232 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.17 |
Crystal size (mm) | 0.32 × 0.27 × 0.16 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2002) |
Tmin, Tmax | 0.675, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8761, 4257, 3096 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.155, 1.01 |
No. of reflections | 4257 |
No. of parameters | 284 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.31, −0.26 |
Computer programs: SMART (Bruker, 2002), SAINT (Bruker, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
The X-ray crystallographic facility at the Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, is gratefully acknowledged.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Pyrimidine has gained considerable attention because of its diversity in biological activity, such as anticarcinogenic and analgesic properties (Ashok et al., 2007). Thiazoles and their derivatives are also found to be associated with various biological activities such as antibacterial, antifungal and anti-inflammatory properties (Jang et al., 2011). Furthermore, the pyrimidines and thiazoles rings are found in the skeleton of many compounds with potent biological activity (Al-Rashood et al.,2010; Wichmann, et al., 1999). Since the two heterocyclic moieties constitute two active pharmacophores that are highly active against inflammation and pain, combining the two is expected to have a synergistic effect in dealing with diseases.
In this paper, we report the molecular and crystal structure of (Z)-ethyl 2-(2,4-dimethylbenzylidene)-7-methyl-3-oxo-5-phenyl-3,5-dihydro-2H-thiazolo [3,2-a]pyrimidine-6-carboxylate (I). The molecule (I), consists of one thiazole ring and two benzene rings. The fused pyrimidine ring has usual geometry as observed in other fused pyrimidine compounds (Kulakov, et al., 2009; Zhao, et al., 2011). The thiazole ring makes dihedral angles of 84.91 (11) and 11.58 (10)° with the benzene rings C7—C12 and C18–C23, respectively. The pyrimidine ring adopts a flattened boat conformation. The C2—C17 double bond exists in the Z configuration. The molecular structure of (I) is illustrated in Fig. 1.