organic compounds
Benzene-1,3,5-tricarboxylic acid–5-(4-pyridyl)pyrimidine (1/1)
aResearch Center of Medical Chemistry & Chemical Biology, Chongqing Technology and Business University, Chongqing 400067, People's Republic of China, and bCollege of Pharmacy, Binzhou Medical University, Yantai 264003, People's Republic of China
*Correspondence e-mail: guigehou@163.com
In the pyrimidine molecule of the title compound, C9H7N3·C9H6O6, the pyridine ring is oriented at 33.26 (11)° with respect to the pyrimidine ring. In the benzene-1,3,5-tricarboxylic acid molecule, the three carboxy groups are twisted by 7.92 (9), 8.68 (10) and 17.07 (10)° relative to the benzene ring. Classical O—H⋯N and O—H⋯O hydrogen bonds and weak C—H⋯O and C—H⋯N hydrogen bonds occur in the crystal structure.
Related literature
For hydrogen bonding in pyrimidine derivatives, see: Hou et al. (2011); Horikoshi et al. (2004); Georgiev et al. (2004); Santoni et al. (2008); Huang & Parquette (2000). For co-crystals of organic acids and pyrimidine, see: Bhogala & Nangia(2003); Du et al. (2005); Hou et al. (2008).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: SMART (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811051075/xu5398sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811051075/xu5398Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811051075/xu5398Isup3.cml
A CH2Cl2 and CH3CN solution (15 mL, 1:1, v/v) of 5-(4-pyridyl)pyrimidine molecule and benzene-1,3,5-tricarboxylic acid (21.0 mg, 0.1 mmol) was kept at room temperature. Upon slow evaporation of the solvent about 5 days, colorless crystals were obtained.
The carboxyl-H atoms were located in a difference Fourier map and refined isotropically. Aromatic H atoms were placed in idealized positions and treated as riding with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C).
Data collection: SMART (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008; molecular graphics: SHELXTL (Sheldrick, 2008; software used to prepare material for publication: SHELXTL (Sheldrick, 2008.Fig. 1. The structure of the title compound with 30% probability displacement ellipsoids. | |
Fig. 2. A view of the hydrogen-bonded double-chain observed in the crystal structure of (1). |
C9H7N3·C9H6O6 | F(000) = 760 |
Mr = 367.31 | Dx = 1.520 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 1381 reflections |
a = 8.3532 (19) Å | θ = 2.5–22.7° |
b = 14.865 (3) Å | µ = 0.12 mm−1 |
c = 13.066 (3) Å | T = 298 K |
β = 98.325 (4)° | Block, colourless |
V = 1605.4 (6) Å3 | 0.32 × 0.12 × 0.10 mm |
Z = 4 |
Bruker SMART APEX CCD diffractometer | 2142 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.042 |
Graphite monochromator | θmax = 25.5°, θmin = 2.1° |
ϕ and ω scans | h = −10→10 |
8278 measured reflections | k = −18→17 |
2967 independent reflections | l = −9→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.055 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.130 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0605P)2 + 0.0652P] where P = (Fo2 + 2Fc2)/3 |
2967 reflections | (Δ/σ)max < 0.001 |
256 parameters | Δρmax = 0.22 e Å−3 |
0 restraints | Δρmin = −0.21 e Å−3 |
C9H7N3·C9H6O6 | V = 1605.4 (6) Å3 |
Mr = 367.31 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.3532 (19) Å | µ = 0.12 mm−1 |
b = 14.865 (3) Å | T = 298 K |
c = 13.066 (3) Å | 0.32 × 0.12 × 0.10 mm |
β = 98.325 (4)° |
Bruker SMART APEX CCD diffractometer | 2142 reflections with I > 2σ(I) |
8278 measured reflections | Rint = 0.042 |
2967 independent reflections |
R[F2 > 2σ(F2)] = 0.055 | 0 restraints |
wR(F2) = 0.130 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.22 e Å−3 |
2967 reflections | Δρmin = −0.21 e Å−3 |
256 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 1.0045 (3) | 0.23487 (15) | 0.04299 (17) | 0.0307 (5) | |
C2 | 0.9253 (3) | 0.28752 (14) | 0.11876 (16) | 0.0298 (5) | |
C3 | 0.9233 (3) | 0.38061 (15) | 0.11112 (17) | 0.0328 (6) | |
H3 | 0.9717 | 0.4086 | 0.0598 | 0.039* | |
C4 | 0.8495 (3) | 0.43246 (14) | 0.17958 (16) | 0.0314 (6) | |
C5 | 0.7764 (3) | 0.38975 (15) | 0.25547 (16) | 0.0323 (6) | |
H5 | 0.7254 | 0.4239 | 0.3009 | 0.039* | |
C6 | 0.7787 (3) | 0.29718 (15) | 0.26421 (16) | 0.0314 (5) | |
C7 | 0.8537 (3) | 0.24592 (15) | 0.19591 (16) | 0.0315 (6) | |
H7 | 0.8559 | 0.1836 | 0.2018 | 0.038* | |
C8 | 0.6958 (3) | 0.24978 (16) | 0.34319 (17) | 0.0327 (6) | |
C9 | 0.8432 (3) | 0.53210 (16) | 0.17124 (18) | 0.0402 (6) | |
C10 | 0.4491 (3) | 0.13542 (17) | 0.52900 (19) | 0.0462 (7) | |
H10 | 0.4782 | 0.1049 | 0.4723 | 0.055* | |
C11 | 0.3919 (3) | 0.08600 (16) | 0.60484 (18) | 0.0405 (7) | |
H11 | 0.3804 | 0.0239 | 0.5985 | 0.049* | |
C12 | 0.3513 (3) | 0.13035 (15) | 0.69125 (16) | 0.0302 (5) | |
C13 | 0.3600 (3) | 0.22316 (15) | 0.69197 (17) | 0.0319 (6) | |
H13 | 0.3274 | 0.2556 | 0.7462 | 0.038* | |
C14 | 0.4171 (3) | 0.26728 (16) | 0.61198 (17) | 0.0361 (6) | |
H14 | 0.4224 | 0.3298 | 0.6137 | 0.043* | |
C15 | 0.3122 (3) | 0.07958 (14) | 0.78172 (16) | 0.0284 (5) | |
C16 | 0.2130 (3) | 0.11360 (15) | 0.84858 (17) | 0.0354 (6) | |
H16 | 0.1628 | 0.1689 | 0.8337 | 0.043* | |
C17 | 0.2625 (3) | −0.00820 (15) | 0.95212 (18) | 0.0423 (7) | |
H17 | 0.2449 | −0.0386 | 1.0117 | 0.051* | |
C18 | 0.3827 (3) | −0.00268 (15) | 0.80969 (18) | 0.0402 (6) | |
H18 | 0.4496 | −0.0283 | 0.7666 | 0.048* | |
N1 | 0.4653 (2) | 0.22434 (14) | 0.53205 (15) | 0.0398 (5) | |
N2 | 0.3604 (3) | −0.04710 (13) | 0.89448 (16) | 0.0470 (6) | |
N3 | 0.1871 (2) | 0.06964 (12) | 0.93362 (14) | 0.0380 (5) | |
O1 | 1.0171 (2) | 0.14904 (10) | 0.06445 (13) | 0.0432 (5) | |
H1 | 1.071 (4) | 0.1197 (19) | 0.014 (2) | 0.082 (10)* | |
O2 | 1.0535 (2) | 0.26844 (10) | −0.03140 (12) | 0.0392 (5) | |
O3 | 0.9472 (3) | 0.56310 (13) | 0.11264 (15) | 0.0621 (7) | |
H3A | 0.930 (4) | 0.622 (2) | 0.095 (2) | 0.088 (11)* | |
O4 | 0.7531 (2) | 0.57872 (11) | 0.21148 (14) | 0.0605 (6) | |
O5 | 0.6348 (2) | 0.30593 (11) | 0.40541 (13) | 0.0446 (5) | |
H5A | 0.572 (4) | 0.276 (2) | 0.449 (2) | 0.093 (11)* | |
O6 | 0.6847 (2) | 0.16917 (11) | 0.34744 (13) | 0.0482 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0310 (14) | 0.0294 (13) | 0.0331 (13) | 0.0002 (10) | 0.0093 (11) | −0.0013 (10) |
C2 | 0.0296 (14) | 0.0323 (13) | 0.0289 (12) | −0.0002 (10) | 0.0087 (10) | 0.0011 (9) |
C3 | 0.0368 (15) | 0.0331 (13) | 0.0315 (13) | −0.0010 (10) | 0.0153 (11) | 0.0037 (9) |
C4 | 0.0343 (15) | 0.0328 (13) | 0.0285 (13) | 0.0029 (10) | 0.0096 (11) | 0.0016 (9) |
C5 | 0.0340 (14) | 0.0378 (14) | 0.0270 (12) | 0.0016 (11) | 0.0108 (11) | −0.0009 (10) |
C6 | 0.0283 (14) | 0.0376 (13) | 0.0293 (13) | −0.0006 (10) | 0.0079 (11) | −0.0004 (10) |
C7 | 0.0337 (14) | 0.0290 (12) | 0.0330 (13) | −0.0006 (10) | 0.0092 (11) | 0.0006 (9) |
C8 | 0.0343 (15) | 0.0370 (14) | 0.0280 (13) | −0.0007 (11) | 0.0081 (11) | 0.0006 (10) |
C9 | 0.0546 (18) | 0.0356 (14) | 0.0332 (13) | 0.0027 (12) | 0.0161 (13) | 0.0019 (11) |
C10 | 0.0549 (19) | 0.0501 (17) | 0.0381 (15) | 0.0041 (13) | 0.0222 (14) | −0.0040 (12) |
C11 | 0.0529 (18) | 0.0337 (14) | 0.0379 (14) | 0.0006 (12) | 0.0168 (13) | −0.0050 (10) |
C12 | 0.0283 (14) | 0.0316 (13) | 0.0318 (13) | −0.0003 (10) | 0.0079 (10) | −0.0017 (9) |
C13 | 0.0343 (15) | 0.0319 (13) | 0.0311 (13) | 0.0005 (10) | 0.0107 (11) | 0.0001 (10) |
C14 | 0.0379 (15) | 0.0329 (13) | 0.0391 (14) | −0.0021 (11) | 0.0110 (12) | 0.0022 (10) |
C15 | 0.0292 (14) | 0.0245 (12) | 0.0326 (13) | −0.0041 (10) | 0.0085 (11) | −0.0022 (9) |
C16 | 0.0399 (16) | 0.0287 (12) | 0.0404 (14) | 0.0026 (10) | 0.0149 (12) | 0.0027 (10) |
C17 | 0.0608 (19) | 0.0314 (13) | 0.0384 (14) | −0.0028 (12) | 0.0197 (13) | 0.0047 (11) |
C18 | 0.0528 (18) | 0.0288 (13) | 0.0435 (15) | 0.0004 (12) | 0.0224 (13) | −0.0029 (11) |
N1 | 0.0390 (13) | 0.0460 (13) | 0.0369 (12) | −0.0002 (10) | 0.0142 (10) | 0.0045 (9) |
N2 | 0.0670 (17) | 0.0312 (11) | 0.0483 (13) | 0.0081 (10) | 0.0269 (12) | 0.0056 (9) |
N3 | 0.0478 (14) | 0.0334 (11) | 0.0365 (12) | 0.0016 (10) | 0.0192 (10) | 0.0021 (9) |
O1 | 0.0601 (13) | 0.0291 (9) | 0.0477 (11) | 0.0043 (8) | 0.0320 (10) | 0.0012 (7) |
O2 | 0.0541 (12) | 0.0323 (9) | 0.0365 (10) | 0.0032 (8) | 0.0249 (9) | 0.0041 (7) |
O3 | 0.0953 (17) | 0.0323 (11) | 0.0711 (14) | 0.0013 (10) | 0.0537 (13) | 0.0090 (9) |
O4 | 0.0866 (16) | 0.0362 (10) | 0.0679 (14) | 0.0151 (10) | 0.0422 (12) | −0.0003 (9) |
O5 | 0.0600 (13) | 0.0422 (10) | 0.0386 (10) | −0.0023 (9) | 0.0306 (10) | 0.0002 (8) |
O6 | 0.0666 (14) | 0.0344 (10) | 0.0498 (11) | −0.0034 (9) | 0.0288 (10) | 0.0039 (8) |
C1—O2 | 1.215 (2) | C11—C12 | 1.391 (3) |
C1—O1 | 1.307 (3) | C11—H11 | 0.9300 |
C1—C2 | 1.490 (3) | C12—C13 | 1.381 (3) |
C2—C3 | 1.387 (3) | C12—C15 | 1.478 (3) |
C2—C7 | 1.390 (3) | C13—C14 | 1.377 (3) |
C3—C4 | 1.390 (3) | C13—H13 | 0.9300 |
C3—H3 | 0.9300 | C14—N1 | 1.335 (3) |
C4—C5 | 1.391 (3) | C14—H14 | 0.9300 |
C4—C9 | 1.485 (3) | C15—C18 | 1.383 (3) |
C5—C6 | 1.381 (3) | C15—C16 | 1.384 (3) |
C5—H5 | 0.9300 | C16—N3 | 1.333 (3) |
C6—C7 | 1.389 (3) | C16—H16 | 0.9300 |
C6—C8 | 1.499 (3) | C17—N2 | 1.322 (3) |
C7—H7 | 0.9300 | C17—N3 | 1.323 (3) |
C8—O6 | 1.204 (3) | C17—H17 | 0.9300 |
C8—O5 | 1.318 (3) | C18—N2 | 1.326 (3) |
C9—O4 | 1.199 (3) | C18—H18 | 0.9300 |
C9—O3 | 1.321 (3) | O1—H1 | 0.95 (3) |
C10—N1 | 1.329 (3) | O3—H3A | 0.92 (3) |
C10—C11 | 1.374 (3) | O5—H5A | 0.95 (3) |
C10—H10 | 0.9300 | ||
O2—C1—O1 | 123.10 (19) | C10—C11—C12 | 118.9 (2) |
O2—C1—C2 | 123.3 (2) | C10—C11—H11 | 120.6 |
O1—C1—C2 | 113.59 (18) | C12—C11—H11 | 120.6 |
C3—C2—C7 | 119.60 (19) | C13—C12—C11 | 117.41 (19) |
C3—C2—C1 | 118.57 (18) | C13—C12—C15 | 121.45 (18) |
C7—C2—C1 | 121.8 (2) | C11—C12—C15 | 121.0 (2) |
C2—C3—C4 | 120.57 (19) | C14—C13—C12 | 119.6 (2) |
C2—C3—H3 | 119.7 | C14—C13—H13 | 120.2 |
C4—C3—H3 | 119.7 | C12—C13—H13 | 120.2 |
C3—C4—C5 | 119.1 (2) | N1—C14—C13 | 122.9 (2) |
C3—C4—C9 | 121.33 (19) | N1—C14—H14 | 118.5 |
C5—C4—C9 | 119.52 (19) | C13—C14—H14 | 118.5 |
C6—C5—C4 | 120.8 (2) | C18—C15—C16 | 115.3 (2) |
C6—C5—H5 | 119.6 | C18—C15—C12 | 121.86 (19) |
C4—C5—H5 | 119.6 | C16—C15—C12 | 122.7 (2) |
C5—C6—C7 | 119.71 (19) | N3—C16—C15 | 122.1 (2) |
C5—C6—C8 | 121.53 (19) | N3—C16—H16 | 119.0 |
C7—C6—C8 | 118.7 (2) | C15—C16—H16 | 119.0 |
C6—C7—C2 | 120.2 (2) | N2—C17—N3 | 126.6 (2) |
C6—C7—H7 | 119.9 | N2—C17—H17 | 116.7 |
C2—C7—H7 | 119.9 | N3—C17—H17 | 116.7 |
O6—C8—O5 | 124.2 (2) | N2—C18—C15 | 123.7 (2) |
O6—C8—C6 | 123.10 (19) | N2—C18—H18 | 118.1 |
O5—C8—C6 | 112.7 (2) | C15—C18—H18 | 118.1 |
O4—C9—O3 | 124.0 (2) | C10—N1—C14 | 117.28 (19) |
O4—C9—C4 | 124.2 (2) | C17—N2—C18 | 115.6 (2) |
O3—C9—C4 | 111.8 (2) | C17—N3—C16 | 116.78 (19) |
N1—C10—C11 | 123.7 (2) | C1—O1—H1 | 109.3 (17) |
N1—C10—H10 | 118.1 | C9—O3—H3A | 113.0 (19) |
C11—C10—H10 | 118.1 | C8—O5—H5A | 111.9 (18) |
O2—C1—C2—C3 | −7.5 (3) | C3—C4—C9—O3 | −16.2 (3) |
O1—C1—C2—C3 | 172.1 (2) | C5—C4—C9—O3 | 165.7 (2) |
O2—C1—C2—C7 | 172.3 (2) | N1—C10—C11—C12 | −1.5 (4) |
O1—C1—C2—C7 | −8.1 (3) | C10—C11—C12—C13 | 4.7 (4) |
C7—C2—C3—C4 | −0.3 (4) | C10—C11—C12—C15 | −171.0 (2) |
C1—C2—C3—C4 | 179.4 (2) | C11—C12—C13—C14 | −4.1 (3) |
C2—C3—C4—C5 | −0.5 (3) | C15—C12—C13—C14 | 171.5 (2) |
C2—C3—C4—C9 | −178.7 (2) | C12—C13—C14—N1 | 0.1 (4) |
C3—C4—C5—C6 | 1.0 (3) | C13—C12—C15—C18 | −144.0 (2) |
C9—C4—C5—C6 | 179.2 (2) | C11—C12—C15—C18 | 31.5 (3) |
C4—C5—C6—C7 | −0.6 (3) | C13—C12—C15—C16 | 31.0 (3) |
C4—C5—C6—C8 | −177.9 (2) | C11—C12—C15—C16 | −153.5 (2) |
C5—C6—C7—C2 | −0.3 (3) | C18—C15—C16—N3 | −0.3 (4) |
C8—C6—C7—C2 | 177.1 (2) | C12—C15—C16—N3 | −175.5 (2) |
C3—C2—C7—C6 | 0.8 (3) | C16—C15—C18—N2 | −0.6 (4) |
C1—C2—C7—C6 | −179.0 (2) | C12—C15—C18—N2 | 174.7 (2) |
C5—C6—C8—O6 | 173.9 (2) | C11—C10—N1—C14 | −2.5 (4) |
C7—C6—C8—O6 | −3.5 (4) | C13—C14—N1—C10 | 3.2 (4) |
C5—C6—C8—O5 | −4.9 (3) | N3—C17—N2—C18 | −0.4 (4) |
C7—C6—C8—O5 | 177.7 (2) | C15—C18—N2—C17 | 0.9 (4) |
C3—C4—C9—O4 | 162.8 (3) | N2—C17—N3—C16 | −0.4 (4) |
C5—C4—C9—O4 | −15.4 (4) | C15—C16—N3—C17 | 0.7 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N3i | 0.95 (3) | 1.70 (3) | 2.652 (2) | 173 (3) |
O3—H3A···O2ii | 0.92 (3) | 1.84 (3) | 2.720 (2) | 161 (3) |
O5—H5A···N1 | 0.95 (3) | 1.68 (3) | 2.626 (2) | 177 (3) |
C3—H3···O3ii | 0.93 | 2.48 | 3.367 (3) | 159 |
C14—H14···N2iii | 0.93 | 2.59 | 3.335 (3) | 137 |
Symmetry codes: (i) x+1, y, z−1; (ii) −x+2, −y+1, −z; (iii) −x+1, y+1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C9H7N3·C9H6O6 |
Mr | 367.31 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 8.3532 (19), 14.865 (3), 13.066 (3) |
β (°) | 98.325 (4) |
V (Å3) | 1605.4 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.32 × 0.12 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8278, 2967, 2142 |
Rint | 0.042 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.055, 0.130, 1.04 |
No. of reflections | 2967 |
No. of parameters | 256 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.22, −0.21 |
Computer programs: SMART (Bruker, 2007), SAINT (Bruker, 2007), SHELXTL (Sheldrick, 2008), SHELXTL (Sheldrick, 2008.
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N3i | 0.95 (3) | 1.70 (3) | 2.652 (2) | 173 (3) |
O3—H3A···O2ii | 0.92 (3) | 1.84 (3) | 2.720 (2) | 161 (3) |
O5—H5A···N1 | 0.95 (3) | 1.68 (3) | 2.626 (2) | 177 (3) |
C3—H3···O3ii | 0.93 | 2.48 | 3.367 (3) | 159 |
C14—H14···N2iii | 0.93 | 2.59 | 3.335 (3) | 137 |
Symmetry codes: (i) x+1, y, z−1; (ii) −x+2, −y+1, −z; (iii) −x+1, y+1/2, −z+3/2. |
Acknowledgements
The authors thank the Scientific Research Project of Chongqing Education Committee, China (KJ100720 and KJTD201020) and Chongqing Technology and Business University, China (2010-56-07) for supporting this work.
References
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Some pyrimidine derivatives, such as such as 5, 5'-dipyrimidine, 1,2-bis(5'-pyrimidyl)ethyne, 5-(3-pyridyl)pyrimidine (L), 5-phenyl-2-(4-pyrid-yl)pyrimidine, and 4-(pyridin-2-yl)pyrimidine-2-sulfonate, could form strong hydrogen-bond interaction and play an essential role in synthesis of supra-molecular structure (Hou et al., 2011; Horikoshi et al., 2004; Georgiev et al., 2004; Santoni et al., 2008; Huang et al., 2000). The co-crystal sates of acid···pyridine and acid···pyrimidine systems have been reported (Bhogala et al., 2003; Du et al., 2005; Hou et al., 2008). Here we report the co-crystal states of L1 and L2.
The title molecular structure is shown in Fig. 1. The asymmetric unit contains 5-(4-pyridyl)pyrimidine molecule (L1) and a benzene-1,3,5-tricarboxylic acid molecule (L2). In the crystal, L1 and L2 arrange in an alternate disposition along the crystallographic c-axis. A H-bonding driven double chain was generated from O—H···N and O—H···O hydrogen bonds between these molecules (Fig. 2). The asymmetric hydrogen bonds influence the intramolecular coplanar of L2 and different dihedral angles of 7.92 (9), 8.68 (10) and 17.07 (10)° are formed between benzene ring and the carboxyl groups. Pyridine ring is twisted to pyrimidine ring at a dihedral angle of 33.26 (11)°, but nearly coplanar with benzene ring of L2 (the dihedral angle, 12.0 (8)°).