metal-organic compounds
Butylbis(diphenylglyoximato)(pyridine-κN)cobalt(III)†
aDQIAQF/INQUIMAE, Universidad de Buenos Aires, Ciudad Universitaria, Pab. II, p. 3, EHA1428 Buenos Aires, Argentina, and bFaculty of Science and Technology, Purbanchal University, Biratnagar, Nepal
*Correspondence e-mail: skumarchem01@gmail.com
In the title compound, [Co(C4H9)(C14H11N2O2)2(C5H5N)], the CoIII atom is coordinated by a butyl group, a nitrogen-bonded pyridine and two N,N′-bidentate diphenylglyoximate ligands in a distorted octahedral geometry. The features two short O—H⋯O bridges between the two chelating anions, with O⋯O distances less than 2.5 Å.
Related literature
For background to the chemistry of cobaloximes, see: Schrauzer (1968); Zangrando et al. (2003); Brown (2006); Randaccio (1999). For related structues, see: Kumar & Gupta (2011); Mandal & Gupta (2005, 2007).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: DIAMOND (Brandenburg, 1999).
Supporting information
10.1107/S1600536812000153/bt5764sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812000153/bt5764Isup2.hkl
A solution of ClCo(dpgH)2py (1 mmol) in 10 ml of methanol was purged thoroughly with N2 for 20 min and was cooled to 0 °C with stirring. The solution turned deep blue after the addition of a few drops of aqueous NaOH followed by sodium borohydride (1.5 mmol in 0.5 ml of water). The color of the solution turned orange-red on the addition of bromobutane (1.5 mmol). The reaction was stirred 1 h at 0 °C then poured into 20 ml chilled water. The resulting orange-red precipitate was filtered, washed with water, and dried. The obtained orange colored compound was recrytallized from dichloromethane and methanol. After five days, orange colored crystals obtained which were suitable for single-crystal data collection.
H atoms were visible in difference Fourier maps but those bonded to C atoms were placed idealized positions and included in the
in a riding-model approximation with C—H(aromatic) = 0.95 Å and Uiso(H) = 1.2 UeqC; C—H(methylene) = 0.99 Å and Uiso(H) = 1.2 UeqC; C—H (methyl) = 0.99 Å, and Uiso(H) = 1.5 UeqC. H atoms bonded to O atoms in the compound were refined freely with isotropic displacement parameters.Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: DIAMOND (Brandenburg, 1999).Fig. 1. ORTEP diagram of the title compound is drawn of the 50% probability level for non-hydrogen atoms. | |
Fig. 2. Packing of the complex in the unit cell. |
[Co(C4H9)(C14H11N2O2)2(C5H5N)] | F(000) = 1408 |
Mr = 673.64 | Dx = 1.357 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 1034 reflections |
a = 11.863 (4) Å | θ = 2.3–18.6° |
b = 19.520 (7) Å | µ = 0.57 mm−1 |
c = 14.402 (5) Å | T = 100 K |
β = 98.486 (8)° | Prism, orange |
V = 3298.5 (19) Å3 | 0.34 × 0.32 × 0.30 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 6796 independent reflections |
Radiation source: fine-focus sealed tube | 3770 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.111 |
phi and ω scans | θmax = 26.5°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −14→13 |
Tmin = 0.830, Tmax = 0.848 | k = −16→24 |
18829 measured reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.069 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.184 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.97 | w = 1/[σ2(Fo2) + (0.0751P)2] where P = (Fo2 + 2Fc2)/3 |
6796 reflections | (Δ/σ)max = 0.001 |
432 parameters | Δρmax = 0.80 e Å−3 |
0 restraints | Δρmin = −0.45 e Å−3 |
[Co(C4H9)(C14H11N2O2)2(C5H5N)] | V = 3298.5 (19) Å3 |
Mr = 673.64 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 11.863 (4) Å | µ = 0.57 mm−1 |
b = 19.520 (7) Å | T = 100 K |
c = 14.402 (5) Å | 0.34 × 0.32 × 0.30 mm |
β = 98.486 (8)° |
Bruker SMART CCD area-detector diffractometer | 6796 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 3770 reflections with I > 2σ(I) |
Tmin = 0.830, Tmax = 0.848 | Rint = 0.111 |
18829 measured reflections |
R[F2 > 2σ(F2)] = 0.069 | 0 restraints |
wR(F2) = 0.184 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.97 | Δρmax = 0.80 e Å−3 |
6796 reflections | Δρmin = −0.45 e Å−3 |
432 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Co1 | 0.08170 (5) | 0.10089 (3) | 0.75782 (4) | 0.02066 (19) | |
O1 | 0.0991 (2) | 0.10204 (16) | 0.56369 (19) | 0.0229 (7) | |
O4 | 0.0709 (2) | 0.10561 (15) | 0.95271 (19) | 0.0218 (7) | |
O3 | −0.0756 (3) | 0.15157 (16) | 0.6064 (2) | 0.0262 (8) | |
O2 | 0.2395 (2) | 0.04611 (16) | 0.90772 (19) | 0.0224 (7) | |
C16 | −0.0827 (4) | 0.1505 (2) | 0.8539 (3) | 0.0193 (10) | |
N1 | −0.0509 (3) | 0.14466 (19) | 0.7007 (2) | 0.0208 (8) | |
N2 | 0.0184 (3) | 0.12110 (18) | 0.8665 (2) | 0.0204 (8) | |
N3 | 0.1476 (3) | 0.08265 (19) | 0.6496 (2) | 0.0226 (9) | |
C23 | −0.1499 (4) | 0.1671 (2) | 0.9301 (3) | 0.0195 (10) | |
C32 | −0.1087 (4) | −0.0783 (2) | 0.6532 (3) | 0.0301 (11) | |
H32 | −0.1412 | −0.0948 | 0.5931 | 0.036* | |
N5 | −0.0019 (3) | 0.00897 (18) | 0.7464 (2) | 0.0204 (8) | |
C7 | 0.3130 (4) | −0.0451 (3) | 0.4455 (3) | 0.0300 (12) | |
H7 | 0.2973 | −0.0879 | 0.4147 | 0.036* | |
C18 | −0.2561 (4) | 0.2355 (2) | 0.6420 (3) | 0.0261 (11) | |
H18 | −0.1915 | 0.2543 | 0.6193 | 0.031* | |
C9 | 0.3916 (4) | −0.0057 (2) | 0.7914 (3) | 0.0218 (10) | |
C2 | 0.2842 (4) | 0.0320 (2) | 0.7575 (3) | 0.0197 (10) | |
N4 | 0.2157 (3) | 0.05638 (18) | 0.8134 (2) | 0.0191 (8) | |
C1 | 0.2425 (3) | 0.0475 (2) | 0.6583 (3) | 0.0200 (10) | |
C28 | −0.1957 (4) | 0.2316 (2) | 0.9378 (3) | 0.0250 (11) | |
H28 | −0.1777 | 0.2673 | 0.8976 | 0.030* | |
C33 | −0.0484 (4) | −0.0177 (2) | 0.6624 (3) | 0.0264 (11) | |
H33 | −0.0390 | 0.0067 | 0.6070 | 0.032* | |
C4 | 0.3626 (4) | 0.0782 (2) | 0.5362 (3) | 0.0231 (10) | |
H4 | 0.3804 | 0.1206 | 0.5671 | 0.028* | |
C13 | 0.5124 (4) | −0.1048 (3) | 0.7867 (4) | 0.0379 (13) | |
H13 | 0.5258 | −0.1485 | 0.7615 | 0.046* | |
C21 | −0.4455 (4) | 0.1830 (3) | 0.7107 (3) | 0.0294 (11) | |
H21 | −0.5104 | 0.1657 | 0.7345 | 0.035* | |
C15 | −0.1253 (4) | 0.1635 (2) | 0.7544 (3) | 0.0184 (9) | |
C3 | 0.2963 (3) | 0.0297 (2) | 0.5754 (3) | 0.0213 (10) | |
C34 | 0.1579 (4) | 0.1948 (2) | 0.7681 (3) | 0.0216 (10) | |
H34A | 0.1735 | 0.2080 | 0.7048 | 0.026* | |
H34B | 0.1025 | 0.2283 | 0.7864 | 0.026* | |
C22 | −0.3364 (4) | 0.1631 (2) | 0.7510 (3) | 0.0232 (10) | |
H22 | −0.3268 | 0.1317 | 0.8020 | 0.028* | |
C14 | 0.4128 (4) | −0.0689 (2) | 0.7534 (3) | 0.0262 (11) | |
H14 | 0.3593 | −0.0878 | 0.7045 | 0.031* | |
C27 | −0.2677 (4) | 0.2452 (3) | 1.0034 (3) | 0.0286 (11) | |
H27 | −0.2972 | 0.2900 | 1.0094 | 0.034* | |
C8 | 0.2713 (4) | −0.0323 (2) | 0.5285 (3) | 0.0247 (10) | |
H8 | 0.2257 | −0.0656 | 0.5536 | 0.030* | |
C24 | −0.1761 (4) | 0.1151 (2) | 0.9898 (3) | 0.0272 (11) | |
H24 | −0.1443 | 0.0707 | 0.9858 | 0.033* | |
C17 | −0.2410 (4) | 0.1892 (2) | 0.7163 (3) | 0.0232 (10) | |
C25 | −0.2482 (4) | 0.1279 (3) | 1.0547 (3) | 0.0323 (12) | |
H25 | −0.2648 | 0.0924 | 1.0957 | 0.039* | |
C19 | −0.3644 (4) | 0.2543 (2) | 0.6010 (3) | 0.0290 (11) | |
H19 | −0.3742 | 0.2849 | 0.5492 | 0.035* | |
C10 | 0.4719 (4) | 0.0221 (3) | 0.8616 (3) | 0.0282 (11) | |
H10 | 0.4585 | 0.0655 | 0.8879 | 0.034* | |
C11 | 0.5716 (4) | −0.0135 (3) | 0.8933 (3) | 0.0341 (12) | |
H11 | 0.6264 | 0.0058 | 0.9409 | 0.041* | |
C5 | 0.4023 (4) | 0.0643 (3) | 0.4527 (3) | 0.0284 (11) | |
H5 | 0.4474 | 0.0974 | 0.4269 | 0.034* | |
C6 | 0.3776 (4) | 0.0035 (3) | 0.4064 (3) | 0.0334 (12) | |
H6 | 0.4043 | −0.0053 | 0.3485 | 0.040* | |
C20 | −0.4589 (4) | 0.2282 (3) | 0.6357 (3) | 0.0345 (13) | |
H20 | −0.5332 | 0.2415 | 0.6078 | 0.041* | |
C26 | −0.2961 (4) | 0.1916 (3) | 1.0605 (3) | 0.0352 (13) | |
H26 | −0.3485 | 0.1993 | 1.1033 | 0.042* | |
C30 | −0.0729 (4) | −0.0892 (3) | 0.8195 (3) | 0.0331 (12) | |
H30 | −0.0796 | −0.1136 | 0.8755 | 0.040* | |
C35 | 0.2666 (4) | 0.2021 (3) | 0.8350 (4) | 0.0382 (13) | |
H35A | 0.3256 | 0.1726 | 0.8138 | 0.046* | |
H35B | 0.2539 | 0.1859 | 0.8978 | 0.046* | |
C36 | 0.3102 (5) | 0.2757 (3) | 0.8432 (4) | 0.0480 (15) | |
H36A | 0.3158 | 0.2936 | 0.7797 | 0.058* | |
H36B | 0.2549 | 0.3045 | 0.8707 | 0.058* | |
C31 | −0.1206 (4) | −0.1145 (3) | 0.7337 (3) | 0.0322 (12) | |
H31 | −0.1614 | −0.1565 | 0.7297 | 0.039* | |
C12 | 0.5915 (4) | −0.0767 (3) | 0.8561 (4) | 0.0383 (13) | |
H12 | 0.6596 | −0.1008 | 0.8783 | 0.046* | |
C29 | −0.0152 (4) | −0.0279 (2) | 0.8232 (3) | 0.0297 (11) | |
H29 | 0.0169 | −0.0106 | 0.8830 | 0.036* | |
C37 | 0.4250 (5) | 0.2807 (3) | 0.9033 (4) | 0.0560 (17) | |
H37A | 0.4501 | 0.3286 | 0.9068 | 0.084* | |
H37B | 0.4803 | 0.2529 | 0.8757 | 0.084* | |
H37C | 0.4195 | 0.2639 | 0.9666 | 0.084* | |
H01 | 0.158 (5) | 0.074 (3) | 0.928 (4) | 0.062 (17)* | |
H02 | 0.012 (5) | 0.126 (3) | 0.579 (4) | 0.08 (2)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.0225 (3) | 0.0236 (4) | 0.0154 (3) | 0.0019 (3) | 0.0012 (2) | 0.0017 (3) |
O1 | 0.0239 (17) | 0.0320 (19) | 0.0124 (15) | 0.0063 (15) | 0.0015 (13) | 0.0050 (14) |
O4 | 0.0236 (17) | 0.0301 (18) | 0.0109 (15) | 0.0036 (14) | 0.0000 (12) | −0.0029 (13) |
O3 | 0.0278 (18) | 0.035 (2) | 0.0155 (16) | 0.0070 (15) | 0.0038 (13) | 0.0037 (14) |
O2 | 0.0199 (16) | 0.0324 (19) | 0.0136 (16) | 0.0033 (14) | −0.0014 (12) | 0.0001 (13) |
C16 | 0.021 (2) | 0.019 (2) | 0.017 (2) | 0.0008 (19) | 0.0005 (18) | −0.0004 (18) |
N1 | 0.022 (2) | 0.026 (2) | 0.0141 (19) | 0.0007 (17) | 0.0026 (15) | 0.0036 (16) |
N2 | 0.028 (2) | 0.022 (2) | 0.0099 (18) | 0.0007 (17) | −0.0005 (15) | 0.0001 (15) |
N3 | 0.029 (2) | 0.027 (2) | 0.0115 (19) | −0.0001 (18) | 0.0014 (16) | 0.0019 (16) |
C23 | 0.021 (2) | 0.024 (3) | 0.012 (2) | 0.0025 (19) | −0.0016 (17) | −0.0025 (18) |
C32 | 0.038 (3) | 0.032 (3) | 0.018 (3) | 0.001 (2) | −0.004 (2) | −0.001 (2) |
N5 | 0.020 (2) | 0.025 (2) | 0.0164 (19) | 0.0017 (17) | 0.0031 (15) | −0.0013 (16) |
C7 | 0.034 (3) | 0.030 (3) | 0.024 (3) | 0.006 (2) | −0.003 (2) | −0.009 (2) |
C18 | 0.031 (3) | 0.024 (3) | 0.023 (3) | 0.002 (2) | 0.005 (2) | 0.003 (2) |
C9 | 0.020 (2) | 0.029 (3) | 0.016 (2) | 0.004 (2) | 0.0034 (18) | 0.0070 (19) |
C2 | 0.022 (2) | 0.020 (2) | 0.017 (2) | −0.0015 (19) | 0.0023 (18) | −0.0005 (18) |
N4 | 0.022 (2) | 0.025 (2) | 0.0093 (18) | −0.0008 (17) | −0.0005 (15) | 0.0019 (15) |
C1 | 0.016 (2) | 0.022 (2) | 0.021 (2) | 0.0009 (19) | 0.0014 (18) | 0.0004 (19) |
C28 | 0.026 (3) | 0.027 (3) | 0.020 (2) | 0.002 (2) | −0.001 (2) | 0.002 (2) |
C33 | 0.027 (3) | 0.035 (3) | 0.017 (2) | 0.001 (2) | −0.0003 (19) | 0.004 (2) |
C4 | 0.022 (2) | 0.027 (3) | 0.020 (2) | 0.000 (2) | 0.0009 (19) | −0.002 (2) |
C13 | 0.040 (3) | 0.038 (3) | 0.037 (3) | 0.016 (3) | 0.010 (2) | 0.005 (3) |
C21 | 0.025 (3) | 0.040 (3) | 0.023 (3) | −0.001 (2) | 0.002 (2) | −0.005 (2) |
C15 | 0.026 (2) | 0.015 (2) | 0.014 (2) | 0.0001 (19) | 0.0034 (18) | −0.0002 (18) |
C3 | 0.012 (2) | 0.028 (3) | 0.023 (2) | 0.0008 (19) | −0.0004 (18) | −0.001 (2) |
C34 | 0.023 (2) | 0.022 (2) | 0.020 (2) | −0.002 (2) | 0.0026 (19) | 0.0026 (19) |
C22 | 0.024 (2) | 0.030 (3) | 0.014 (2) | 0.003 (2) | −0.0010 (18) | 0.000 (2) |
C14 | 0.026 (3) | 0.033 (3) | 0.021 (2) | 0.001 (2) | 0.005 (2) | 0.003 (2) |
C27 | 0.025 (3) | 0.033 (3) | 0.027 (3) | 0.004 (2) | 0.000 (2) | −0.007 (2) |
C8 | 0.021 (2) | 0.031 (3) | 0.022 (2) | 0.000 (2) | 0.0032 (19) | 0.002 (2) |
C24 | 0.036 (3) | 0.024 (3) | 0.022 (3) | 0.005 (2) | 0.004 (2) | 0.001 (2) |
C17 | 0.028 (3) | 0.023 (3) | 0.017 (2) | 0.003 (2) | −0.0015 (19) | −0.0023 (19) |
C25 | 0.041 (3) | 0.031 (3) | 0.028 (3) | −0.003 (2) | 0.015 (2) | 0.002 (2) |
C19 | 0.040 (3) | 0.023 (3) | 0.023 (3) | 0.005 (2) | 0.002 (2) | −0.002 (2) |
C10 | 0.028 (3) | 0.032 (3) | 0.025 (3) | 0.002 (2) | 0.003 (2) | 0.000 (2) |
C11 | 0.022 (3) | 0.049 (4) | 0.029 (3) | 0.001 (2) | −0.004 (2) | 0.006 (2) |
C5 | 0.025 (3) | 0.036 (3) | 0.025 (3) | 0.002 (2) | 0.007 (2) | 0.003 (2) |
C6 | 0.030 (3) | 0.047 (3) | 0.022 (3) | 0.008 (3) | 0.001 (2) | −0.001 (2) |
C20 | 0.029 (3) | 0.043 (3) | 0.027 (3) | 0.010 (2) | −0.010 (2) | −0.004 (2) |
C26 | 0.036 (3) | 0.040 (3) | 0.032 (3) | −0.002 (3) | 0.012 (2) | −0.013 (2) |
C30 | 0.045 (3) | 0.032 (3) | 0.021 (3) | −0.007 (3) | 0.002 (2) | 0.005 (2) |
C35 | 0.040 (3) | 0.032 (3) | 0.044 (3) | −0.002 (3) | 0.008 (3) | −0.002 (3) |
C36 | 0.047 (4) | 0.047 (4) | 0.048 (4) | −0.007 (3) | −0.001 (3) | 0.000 (3) |
C31 | 0.039 (3) | 0.029 (3) | 0.028 (3) | −0.007 (2) | 0.003 (2) | −0.001 (2) |
C12 | 0.028 (3) | 0.055 (4) | 0.032 (3) | 0.013 (3) | 0.002 (2) | 0.011 (3) |
C29 | 0.040 (3) | 0.029 (3) | 0.018 (2) | −0.001 (2) | −0.002 (2) | −0.003 (2) |
C37 | 0.056 (4) | 0.065 (4) | 0.051 (4) | −0.022 (3) | 0.021 (3) | −0.018 (3) |
Co1—N1 | 1.870 (4) | C13—H13 | 0.9500 |
Co1—N2 | 1.875 (3) | C21—C20 | 1.384 (7) |
Co1—N3 | 1.879 (4) | C21—C22 | 1.394 (6) |
Co1—N4 | 1.883 (3) | C21—H21 | 0.9500 |
Co1—C34 | 2.039 (4) | C15—C17 | 1.488 (6) |
Co1—N5 | 2.045 (4) | C3—C8 | 1.396 (6) |
O1—N3 | 1.339 (4) | C34—C35 | 1.498 (6) |
O1—H02 | 1.19 (7) | C34—H34A | 0.9900 |
O4—N2 | 1.339 (4) | C34—H34B | 0.9900 |
O4—H01 | 1.30 (6) | C22—C17 | 1.399 (6) |
O3—N1 | 1.354 (4) | C22—H22 | 0.9500 |
O3—H02 | 1.27 (7) | C14—H14 | 0.9500 |
O2—N4 | 1.361 (4) | C27—C26 | 1.402 (7) |
O2—H01 | 1.18 (6) | C27—H27 | 0.9500 |
C16—N2 | 1.318 (5) | C8—H8 | 0.9500 |
C16—C15 | 1.470 (6) | C24—C25 | 1.379 (6) |
C16—C23 | 1.483 (6) | C24—H24 | 0.9500 |
N1—C15 | 1.308 (5) | C25—C26 | 1.375 (7) |
N3—C1 | 1.308 (5) | C25—H25 | 0.9500 |
C23—C28 | 1.384 (6) | C19—C20 | 1.389 (7) |
C23—C24 | 1.395 (6) | C19—H19 | 0.9500 |
C32—C33 | 1.378 (6) | C10—C11 | 1.389 (6) |
C32—C31 | 1.383 (6) | C10—H10 | 0.9500 |
C32—H32 | 0.9500 | C11—C12 | 1.378 (7) |
N5—C29 | 1.348 (5) | C11—H11 | 0.9500 |
N5—C33 | 1.357 (5) | C5—C6 | 1.372 (7) |
C7—C8 | 1.382 (6) | C5—H5 | 0.9500 |
C7—C6 | 1.390 (7) | C6—H6 | 0.9500 |
C7—H7 | 0.9500 | C20—H20 | 0.9500 |
C18—C19 | 1.382 (6) | C26—H26 | 0.9500 |
C18—C17 | 1.391 (6) | C30—C31 | 1.373 (6) |
C18—H18 | 0.9500 | C30—C29 | 1.376 (6) |
C9—C14 | 1.387 (6) | C30—H30 | 0.9500 |
C9—C10 | 1.393 (6) | C35—C36 | 1.525 (7) |
C9—C2 | 1.489 (6) | C35—H35A | 0.9900 |
C2—N4 | 1.315 (5) | C35—H35B | 0.9900 |
C2—C1 | 1.472 (6) | C36—C37 | 1.506 (8) |
C1—C3 | 1.476 (6) | C36—H36A | 0.9900 |
C28—C27 | 1.389 (6) | C36—H36B | 0.9900 |
C28—H28 | 0.9500 | C31—H31 | 0.9500 |
C33—H33 | 0.9500 | C12—H12 | 0.9500 |
C4—C5 | 1.380 (6) | C29—H29 | 0.9500 |
C4—C3 | 1.402 (6) | C37—H37A | 0.9800 |
C4—H4 | 0.9500 | C37—H37B | 0.9800 |
C13—C12 | 1.380 (7) | C37—H37C | 0.9800 |
C13—C14 | 1.397 (6) | ||
N1—Co1—N2 | 81.74 (15) | C35—C34—Co1 | 117.5 (3) |
N1—Co1—N3 | 98.50 (15) | C35—C34—H34A | 107.9 |
N2—Co1—N3 | 178.50 (16) | Co1—C34—H34A | 107.9 |
N1—Co1—N4 | 179.07 (15) | C35—C34—H34B | 107.9 |
N2—Co1—N4 | 99.17 (15) | Co1—C34—H34B | 107.9 |
N3—Co1—N4 | 80.59 (15) | H34A—C34—H34B | 107.2 |
N1—Co1—C34 | 87.49 (17) | C21—C22—C17 | 120.0 (4) |
N2—Co1—C34 | 88.76 (17) | C21—C22—H22 | 120.0 |
N3—Co1—C34 | 89.78 (17) | C17—C22—H22 | 120.0 |
N4—Co1—C34 | 92.67 (16) | C9—C14—C13 | 120.3 (5) |
N1—Co1—N5 | 89.95 (15) | C9—C14—H14 | 119.9 |
N2—Co1—N5 | 90.15 (15) | C13—C14—H14 | 119.9 |
N3—Co1—N5 | 91.33 (15) | C28—C27—C26 | 118.8 (5) |
N4—Co1—N5 | 89.90 (15) | C28—C27—H27 | 120.6 |
C34—Co1—N5 | 177.33 (16) | C26—C27—H27 | 120.6 |
N3—O1—H02 | 102 (3) | C7—C8—C3 | 119.8 (4) |
N2—O4—H01 | 97 (2) | C7—C8—H8 | 120.1 |
N1—O3—H02 | 102 (3) | C3—C8—H8 | 120.1 |
N4—O2—H01 | 97 (3) | C25—C24—C23 | 120.2 (4) |
N2—C16—C15 | 112.5 (4) | C25—C24—H24 | 119.9 |
N2—C16—C23 | 124.8 (4) | C23—C24—H24 | 119.9 |
C15—C16—C23 | 122.6 (4) | C18—C17—C22 | 119.5 (4) |
C15—N1—O3 | 120.0 (3) | C18—C17—C15 | 120.7 (4) |
C15—N1—Co1 | 117.7 (3) | C22—C17—C15 | 119.7 (4) |
O3—N1—Co1 | 122.0 (3) | C26—C25—C24 | 120.5 (5) |
C16—N2—O4 | 121.0 (3) | C26—C25—H25 | 119.7 |
C16—N2—Co1 | 116.5 (3) | C24—C25—H25 | 119.7 |
O4—N2—Co1 | 122.5 (3) | C18—C19—C20 | 119.8 (4) |
C1—N3—O1 | 118.9 (3) | C18—C19—H19 | 120.1 |
C1—N3—Co1 | 118.5 (3) | C20—C19—H19 | 120.1 |
O1—N3—Co1 | 122.5 (3) | C11—C10—C9 | 120.1 (5) |
C28—C23—C24 | 119.1 (4) | C11—C10—H10 | 120.0 |
C28—C23—C16 | 121.2 (4) | C9—C10—H10 | 120.0 |
C24—C23—C16 | 119.4 (4) | C12—C11—C10 | 120.4 (5) |
C33—C32—C31 | 118.3 (4) | C12—C11—H11 | 119.8 |
C33—C32—H32 | 120.9 | C10—C11—H11 | 119.8 |
C31—C32—H32 | 120.9 | C6—C5—C4 | 121.2 (5) |
C29—N5—C33 | 116.4 (4) | C6—C5—H5 | 119.4 |
C29—N5—Co1 | 121.1 (3) | C4—C5—H5 | 119.4 |
C33—N5—Co1 | 122.5 (3) | C5—C6—C7 | 118.9 (4) |
C8—C7—C6 | 121.1 (5) | C5—C6—H6 | 120.5 |
C8—C7—H7 | 119.5 | C7—C6—H6 | 120.5 |
C6—C7—H7 | 119.5 | C21—C20—C19 | 120.6 (5) |
C19—C18—C17 | 120.5 (4) | C21—C20—H20 | 119.7 |
C19—C18—H18 | 119.8 | C19—C20—H20 | 119.7 |
C17—C18—H18 | 119.8 | C25—C26—C27 | 120.1 (4) |
C14—C9—C10 | 119.2 (4) | C25—C26—H26 | 119.9 |
C14—C9—C2 | 120.3 (4) | C27—C26—H26 | 119.9 |
C10—C9—C2 | 120.4 (4) | C31—C30—C29 | 119.0 (4) |
N4—C2—C1 | 111.7 (4) | C31—C30—H30 | 120.5 |
N4—C2—C9 | 123.7 (4) | C29—C30—H30 | 120.5 |
C1—C2—C9 | 124.7 (4) | C34—C35—C36 | 112.9 (4) |
C2—N4—O2 | 120.1 (3) | C34—C35—H35A | 109.0 |
C2—N4—Co1 | 117.8 (3) | C36—C35—H35A | 109.0 |
O2—N4—Co1 | 122.0 (3) | C34—C35—H35B | 109.0 |
N3—C1—C2 | 111.3 (4) | C36—C35—H35B | 109.0 |
N3—C1—C3 | 120.9 (4) | H35A—C35—H35B | 107.8 |
C2—C1—C3 | 127.8 (4) | C37—C36—C35 | 111.9 (5) |
C23—C28—C27 | 121.1 (4) | C37—C36—H36A | 109.2 |
C23—C28—H28 | 119.4 | C35—C36—H36A | 109.2 |
C27—C28—H28 | 119.4 | C37—C36—H36B | 109.2 |
N5—C33—C32 | 123.5 (4) | C35—C36—H36B | 109.2 |
N5—C33—H33 | 118.2 | H36A—C36—H36B | 107.9 |
C32—C33—H33 | 118.2 | C30—C31—C32 | 119.4 (5) |
C5—C4—C3 | 120.1 (4) | C30—C31—H31 | 120.3 |
C5—C4—H4 | 119.9 | C32—C31—H31 | 120.3 |
C3—C4—H4 | 119.9 | C11—C12—C13 | 120.0 (5) |
C12—C13—C14 | 119.9 (5) | C11—C12—H12 | 120.0 |
C12—C13—H13 | 120.0 | C13—C12—H12 | 120.0 |
C14—C13—H13 | 120.0 | N5—C29—C30 | 123.4 (4) |
C20—C21—C22 | 119.7 (4) | N5—C29—H29 | 118.3 |
C20—C21—H21 | 120.2 | C30—C29—H29 | 118.3 |
C22—C21—H21 | 120.2 | C36—C37—H37A | 109.5 |
N1—C15—C16 | 111.3 (4) | C36—C37—H37B | 109.5 |
N1—C15—C17 | 122.9 (4) | H37A—C37—H37B | 109.5 |
C16—C15—C17 | 125.6 (4) | C36—C37—H37C | 109.5 |
C8—C3—C4 | 118.8 (4) | H37A—C37—H37C | 109.5 |
C8—C3—C1 | 120.6 (4) | H37B—C37—H37C | 109.5 |
C4—C3—C1 | 120.1 (4) | ||
N2—Co1—N1—C15 | −4.5 (3) | Co1—N3—C1—C3 | 178.0 (3) |
N3—Co1—N1—C15 | 177.0 (3) | N4—C2—C1—N3 | 0.7 (5) |
N4—Co1—N1—C15 | 166 (45) | C9—C2—C1—N3 | −178.4 (4) |
C34—Co1—N1—C15 | −93.6 (3) | N4—C2—C1—C3 | 179.1 (4) |
N5—Co1—N1—C15 | 85.6 (3) | C9—C2—C1—C3 | 0.0 (7) |
N2—Co1—N1—O3 | −178.6 (3) | C24—C23—C28—C27 | −0.5 (7) |
N3—Co1—N1—O3 | 2.9 (3) | C16—C23—C28—C27 | 173.7 (4) |
N4—Co1—N1—O3 | −8 (10) | C29—N5—C33—C32 | 1.3 (6) |
C34—Co1—N1—O3 | 92.3 (3) | Co1—N5—C33—C32 | −177.6 (4) |
N5—Co1—N1—O3 | −88.4 (3) | C31—C32—C33—N5 | −1.2 (7) |
C15—C16—N2—O4 | 179.8 (3) | O3—N1—C15—C16 | 178.9 (3) |
C23—C16—N2—O4 | −2.3 (6) | Co1—N1—C15—C16 | 4.8 (5) |
C15—C16—N2—Co1 | −1.5 (5) | O3—N1—C15—C17 | 3.4 (6) |
C23—C16—N2—Co1 | 176.5 (3) | Co1—N1—C15—C17 | −170.7 (3) |
N1—Co1—N2—C16 | 3.2 (3) | N2—C16—C15—N1 | −2.0 (5) |
N3—Co1—N2—C16 | 103 (6) | C23—C16—C15—N1 | 179.9 (4) |
N4—Co1—N2—C16 | −176.7 (3) | N2—C16—C15—C17 | 173.3 (4) |
C34—Co1—N2—C16 | 90.8 (3) | C23—C16—C15—C17 | −4.7 (7) |
N5—Co1—N2—C16 | −86.8 (3) | C5—C4—C3—C8 | −0.1 (6) |
N1—Co1—N2—O4 | −178.1 (3) | C5—C4—C3—C1 | −172.7 (4) |
N3—Co1—N2—O4 | −79 (6) | N3—C1—C3—C8 | −92.1 (6) |
N4—Co1—N2—O4 | 2.0 (3) | C2—C1—C3—C8 | 89.6 (6) |
C34—Co1—N2—O4 | −90.5 (3) | N3—C1—C3—C4 | 80.4 (5) |
N5—Co1—N2—O4 | 92.0 (3) | C2—C1—C3—C4 | −97.9 (6) |
N1—Co1—N3—C1 | −176.0 (3) | N1—Co1—C34—C35 | 163.0 (4) |
N2—Co1—N3—C1 | 85 (6) | N2—Co1—C34—C35 | 81.3 (4) |
N4—Co1—N3—C1 | 3.8 (3) | N3—Co1—C34—C35 | −98.4 (4) |
C34—Co1—N3—C1 | 96.5 (3) | N4—Co1—C34—C35 | −17.9 (4) |
N5—Co1—N3—C1 | −85.9 (3) | N5—Co1—C34—C35 | 147 (3) |
N1—Co1—N3—O1 | 1.5 (3) | C20—C21—C22—C17 | 0.6 (7) |
N2—Co1—N3—O1 | −98 (6) | C10—C9—C14—C13 | 1.3 (6) |
N4—Co1—N3—O1 | −178.7 (3) | C2—C9—C14—C13 | −178.7 (4) |
C34—Co1—N3—O1 | −85.9 (3) | C12—C13—C14—C9 | −1.5 (7) |
N5—Co1—N3—O1 | 91.6 (3) | C23—C28—C27—C26 | −1.7 (7) |
N2—C16—C23—C28 | 129.9 (5) | C6—C7—C8—C3 | −1.5 (7) |
C15—C16—C23—C28 | −52.3 (6) | C4—C3—C8—C7 | 0.7 (6) |
N2—C16—C23—C24 | −56.0 (6) | C1—C3—C8—C7 | 173.3 (4) |
C15—C16—C23—C24 | 121.8 (5) | C28—C23—C24—C25 | 0.9 (7) |
N1—Co1—N5—C29 | −118.8 (3) | C16—C23—C24—C25 | −173.3 (4) |
N2—Co1—N5—C29 | −37.0 (3) | C19—C18—C17—C22 | −1.7 (7) |
N3—Co1—N5—C29 | 142.7 (3) | C19—C18—C17—C15 | 173.8 (4) |
N4—Co1—N5—C29 | 62.1 (3) | C21—C22—C17—C18 | 0.5 (7) |
C34—Co1—N5—C29 | −103 (3) | C21—C22—C17—C15 | −175.0 (4) |
N1—Co1—N5—C33 | 60.1 (3) | N1—C15—C17—C18 | −43.1 (6) |
N2—Co1—N5—C33 | 141.8 (3) | C16—C15—C17—C18 | 142.0 (5) |
N3—Co1—N5—C33 | −38.4 (3) | N1—C15—C17—C22 | 132.3 (5) |
N4—Co1—N5—C33 | −119.0 (3) | C16—C15—C17—C22 | −42.5 (6) |
C34—Co1—N5—C33 | 76 (3) | C23—C24—C25—C26 | 0.8 (7) |
C14—C9—C2—N4 | 128.6 (5) | C17—C18—C19—C20 | 1.7 (7) |
C10—C9—C2—N4 | −51.4 (6) | C14—C9—C10—C11 | −0.4 (6) |
C14—C9—C2—C1 | −52.5 (6) | C2—C9—C10—C11 | 179.6 (4) |
C10—C9—C2—C1 | 127.5 (5) | C9—C10—C11—C12 | −0.4 (7) |
C1—C2—N4—O2 | 179.0 (3) | C3—C4—C5—C6 | 0.2 (7) |
C9—C2—N4—O2 | −1.9 (6) | C4—C5—C6—C7 | −1.0 (7) |
C1—C2—N4—Co1 | 2.3 (5) | C8—C7—C6—C5 | 1.7 (7) |
C9—C2—N4—Co1 | −178.6 (3) | C22—C21—C20—C19 | −0.6 (7) |
N1—Co1—N4—C2 | 7 (10) | C18—C19—C20—C21 | −0.6 (7) |
N2—Co1—N4—C2 | 178.2 (3) | C24—C25—C26—C27 | −3.1 (7) |
N3—Co1—N4—C2 | −3.3 (3) | C28—C27—C26—C25 | 3.5 (7) |
C34—Co1—N4—C2 | −92.6 (3) | Co1—C34—C35—C36 | −175.0 (4) |
N5—Co1—N4—C2 | 88.1 (3) | C34—C35—C36—C37 | −174.4 (5) |
N1—Co1—N4—O2 | −169 (45) | C29—C30—C31—C32 | 0.7 (7) |
N2—Co1—N4—O2 | 1.6 (3) | C33—C32—C31—C30 | 0.2 (7) |
N3—Co1—N4—O2 | −179.9 (3) | C10—C11—C12—C13 | 0.3 (8) |
C34—Co1—N4—O2 | 90.7 (3) | C14—C13—C12—C11 | 0.6 (8) |
N5—Co1—N4—O2 | −88.6 (3) | C33—N5—C29—C30 | −0.4 (7) |
O1—N3—C1—C2 | 178.9 (3) | Co1—N5—C29—C30 | 178.5 (4) |
Co1—N3—C1—C2 | −3.5 (5) | C31—C30—C29—N5 | −0.6 (8) |
O1—N3—C1—C3 | 0.4 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H01···O4 | 1.18 (6) | 1.30 (6) | 2.480 (4) | 178 (9) |
O1—H02···O3 | 1.18 (6) | 1.27 (6) | 2.446 (4) | 173 (5) |
Experimental details
Crystal data | |
Chemical formula | [Co(C4H9)(C14H11N2O2)2(C5H5N)] |
Mr | 673.64 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 100 |
a, b, c (Å) | 11.863 (4), 19.520 (7), 14.402 (5) |
β (°) | 98.486 (8) |
V (Å3) | 3298.5 (19) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.57 |
Crystal size (mm) | 0.34 × 0.32 × 0.30 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.830, 0.848 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18829, 6796, 3770 |
Rint | 0.111 |
(sin θ/λ)max (Å−1) | 0.628 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.069, 0.184, 0.97 |
No. of reflections | 6796 |
No. of parameters | 432 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.80, −0.45 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), DIAMOND (Brandenburg, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H01···O4 | 1.18 (6) | 1.30 (6) | 2.480 (4) | 178 (9) |
O1—H02···O3 | 1.18 (6) | 1.27 (6) | 2.446 (4) | 173 (5) |
Footnotes
†This article is dedicated to late Professor B. D. Gupta.
Acknowledgements
The authors are thankul to the IIT Kanpur, India for data collection. SK is thankful to TWAS and CONICET, Argentina.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
One of the unique and intriguing properties of the coenzyme B12 is different catalytic activity of two different coenzymes. How the Co—C bond is activated toward homolysis or heterolysis is an enduring subject of research (Zangrando et al., 2003; Brown, 2006; Randaccio, 1999). The recent crystallographic data on cobalamins suggest that the structural effects of changes in the alkyl residue are similar (Kumar & Gupta, 2011) to those found in the cobaloximes, RCo(dmgH)2B, and sometimes can be related to their chemical reactivity (Mandal & Gupta, 2005, 2007). Cobaloximes have the general formula RCo(L)2B, where R is an organic group bonded to cobalt. B is an axial base trans to the organic group, and L is a monoanionic dioxime ligand. Diphenylglyoximate (dpg) is a familiar ligand with excellent coordination capability to generate mono-, bi- or trinuclear complexes. Herein, we report the synthesis and structure of new cobaloxime compound, namely butyl-Co(dpgH)2pyridine.
The crystal structure of title compound is shown in Figure 1. The cobalt atom is coordinated by two N,N-bidentate diphenylglyoximate ligands, a butyl and a pyridyl residue in a distored octahedral geometry. The Co—N(dpg) bond lengths range from 1.877 (3) to 1.886 (3) Å.