organic compounds
Ethyl 2-[(2,4-difluorophenyl)hydrazinylidene]-3-oxobutanoate
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bDepartment of Studies in Chemistry, Mangalore University, Mangalagangotri, Mangalore 574 199, India
*Correspondence e-mail: hkfun@usm.my
The 12H12F2N2O3, contains two molecules, both of which exist in an E conformation with respect to their C=N bonds [1.321 (6) and 1.310 (6) Å]. The molecular conformations are supported by intramolecular N—H⋯O hydrogen bonds, which generate S(6) rings. In the crystal, molecules are linked by C—H⋯O and C—H⋯F hydrogen bonds into layers lying parallel to (001). The crystal studied was an with a 0.58 (1):0.42 (1) domain ratio.
of the title compound, CRelated literature
For the biological activity of oxobutanoate derivatives, see: Billington et al. (1979); Stancho et al. (2008). For the biological activity of pyrazole derivatives, see: Rai et al. (2008); Girisha et al. (2010); Isloor et al. (2009). For hydrogen-bond motifs, see: Bernstein et al. (1995). For bond-length data, see: Allen et al. (1987).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536812000803/hb6590sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812000803/hb6590Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812000803/hb6590Isup3.cml
The title compound was prepared by dissolving 2,4-difluoroaniline (0.01 mol) in dilute hydrochloric acid (10 ml) and cooled to 273K in an ice bath. To this, a cold solution of sodium nitrite (0.02 mol) was added. The resulting diazonium salt solution was filtered into a cold solution of ethyl acetoacetate (0.05 mol) and sodium acetate in ethanol. The separated yellow solid was filtered, washed with water and recrystallized from ethanol. Yellow blocks of (I) were obtained from DMF by slow evaporation.
Atoms H1NA and H1NB were located in a difference Fourier map and refined freely with N-H = 0.86 (6) and 0.92 (5) Å. The remaining H atoms were positioned geometrically and refined using a riding model with C–H = 0.93-0.97 Å and Uiso(H) = 1.2 or 1.5 Ueq(C). A rotating-group model was applied for the methyl groups. The crystal studied was an
with a 0.58 (1):0.42 (1) domain ratio.Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound showing 30% probability displacement ellipsoids for non-H atoms. Intramolecular hydrogen bonds are shown as dashed lines. | |
Fig. 2. The crystal structure of the title compound, viewed along the b axis. H atoms not involved in hydrogen bonds (dashed lines) have been omitted for clarity. |
C12H12F2N2O3 | F(000) = 1120 |
Mr = 270.24 | Dx = 1.385 Mg m−3 |
Orthorhombic, Pca21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2c -2ac | Cell parameters from 3499 reflections |
a = 21.814 (4) Å | θ = 2.3–29.8° |
b = 9.0079 (15) Å | µ = 0.12 mm−1 |
c = 13.188 (2) Å | T = 296 K |
V = 2591.4 (8) Å3 | Block, yellow |
Z = 8 | 0.38 × 0.32 × 0.31 mm |
Bruker SMART APEXII DUO CCD diffractometer | 3855 independent reflections |
Radiation source: fine-focus sealed tube | 1903 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.058 |
ϕ and ω scans | θmax = 29.9°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −25→30 |
Tmin = 0.957, Tmax = 0.964 | k = −12→11 |
14829 measured reflections | l = −18→18 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.065 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.219 | w = 1/[σ2(Fo2) + (0.1013P)2 + 0.7683P] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max = 0.001 |
3855 reflections | Δρmax = 0.22 e Å−3 |
356 parameters | Δρmin = −0.24 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 3406 Friedel pairs |
Primary atom site location: structure-invariant direct methods |
C12H12F2N2O3 | V = 2591.4 (8) Å3 |
Mr = 270.24 | Z = 8 |
Orthorhombic, Pca21 | Mo Kα radiation |
a = 21.814 (4) Å | µ = 0.12 mm−1 |
b = 9.0079 (15) Å | T = 296 K |
c = 13.188 (2) Å | 0.38 × 0.32 × 0.31 mm |
Bruker SMART APEXII DUO CCD diffractometer | 3855 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 1903 reflections with I > 2σ(I) |
Tmin = 0.957, Tmax = 0.964 | Rint = 0.058 |
14829 measured reflections |
R[F2 > 2σ(F2)] = 0.065 | 1 restraint |
wR(F2) = 0.219 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.22 e Å−3 |
3855 reflections | Δρmin = −0.24 e Å−3 |
356 parameters | Absolute structure: Flack (1983), 3406 Friedel pairs |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F1A | 0.02111 (12) | −0.0552 (3) | 0.4291 (4) | 0.0738 (10) | |
F2A | −0.01712 (16) | 0.4553 (4) | 0.4498 (5) | 0.1088 (16) | |
O1A | 0.31436 (14) | 0.0724 (4) | 0.4235 (4) | 0.0659 (10) | |
O2A | 0.16259 (16) | −0.2942 (4) | 0.4261 (4) | 0.0719 (11) | |
O3A | 0.34608 (17) | −0.1594 (5) | 0.4477 (5) | 0.0828 (14) | |
N1A | 0.14227 (16) | −0.0160 (5) | 0.4336 (4) | 0.0500 (10) | |
N2A | 0.20161 (16) | 0.0028 (5) | 0.4353 (4) | 0.0478 (10) | |
C1A | 0.1253 (2) | 0.2526 (6) | 0.4428 (6) | 0.0642 (16) | |
H1AA | 0.1673 | 0.2701 | 0.4442 | 0.077* | |
C2A | 0.0849 (3) | 0.3703 (6) | 0.4469 (6) | 0.0700 (15) | |
H2AA | 0.0991 | 0.4675 | 0.4510 | 0.084* | |
C3A | 0.0232 (2) | 0.3402 (6) | 0.4448 (6) | 0.0712 (16) | |
C4A | −0.0002 (2) | 0.2000 (6) | 0.4385 (6) | 0.0633 (13) | |
H4AA | −0.0423 | 0.1829 | 0.4365 | 0.076* | |
C5A | 0.0411 (2) | 0.0857 (6) | 0.4353 (5) | 0.0512 (11) | |
C6A | 0.10348 (19) | 0.1081 (6) | 0.4367 (4) | 0.0469 (11) | |
C7A | 0.2391 (2) | −0.1124 (5) | 0.4330 (5) | 0.0483 (11) | |
C8A | 0.3050 (2) | −0.0713 (6) | 0.4356 (5) | 0.0529 (13) | |
C9A | 0.3782 (2) | 0.1211 (7) | 0.4260 (6) | 0.0685 (16) | |
H9AA | 0.4024 | 0.0646 | 0.3779 | 0.082* | |
H9AB | 0.3952 | 0.1066 | 0.4932 | 0.082* | |
C11A | 0.2181 (2) | −0.2672 (6) | 0.4285 (5) | 0.0606 (13) | |
C12A | 0.2620 (3) | −0.3935 (6) | 0.4238 (10) | 0.104 (3) | |
H12A | 0.2397 | −0.4853 | 0.4220 | 0.156* | |
H12B | 0.2880 | −0.3917 | 0.4825 | 0.156* | |
H12C | 0.2866 | −0.3849 | 0.3638 | 0.156* | |
C10A | 0.3790 (4) | 0.2822 (9) | 0.3988 (8) | 0.113 (4) | |
H10A | 0.4204 | 0.3180 | 0.3999 | 0.169* | |
H10B | 0.3549 | 0.3369 | 0.4468 | 0.169* | |
H10C | 0.3622 | 0.2951 | 0.3321 | 0.169* | |
F1B | −0.12910 (11) | −0.0552 (3) | 0.1789 (3) | 0.0686 (8) | |
F2B | −0.16421 (16) | 0.4584 (4) | 0.1702 (5) | 0.1085 (14) | |
O1B | 0.16419 (13) | 0.0704 (4) | 0.1812 (4) | 0.0613 (10) | |
O2B | 0.01257 (17) | −0.2955 (4) | 0.1951 (5) | 0.0810 (14) | |
O3B | 0.19708 (15) | −0.1614 (4) | 0.1938 (4) | 0.0756 (12) | |
N1B | −0.00755 (16) | −0.0181 (4) | 0.1844 (4) | 0.0491 (9) | |
N2B | 0.05230 (15) | −0.0004 (4) | 0.1842 (4) | 0.0479 (9) | |
C1B | −0.0234 (2) | 0.2521 (6) | 0.1778 (6) | 0.0622 (13) | |
H1BA | 0.0187 | 0.2693 | 0.1788 | 0.075* | |
C2B | −0.0629 (2) | 0.3694 (6) | 0.1749 (7) | 0.0731 (16) | |
H2BA | −0.0482 | 0.4663 | 0.1725 | 0.088* | |
C3B | −0.1250 (2) | 0.3412 (6) | 0.1756 (6) | 0.0677 (15) | |
C4B | −0.1493 (2) | 0.2016 (6) | 0.1751 (5) | 0.0605 (13) | |
H4BA | −0.1914 | 0.1856 | 0.1721 | 0.073* | |
C5B | −0.1080 (2) | 0.0857 (5) | 0.1793 (5) | 0.0489 (11) | |
C6B | −0.04523 (19) | 0.1069 (5) | 0.1792 (5) | 0.0445 (10) | |
C7B | 0.0894 (2) | −0.1147 (5) | 0.1874 (4) | 0.0465 (10) | |
C8B | 0.1558 (2) | −0.0748 (6) | 0.1879 (5) | 0.0486 (11) | |
C9B | 0.2268 (2) | 0.1242 (6) | 0.1836 (7) | 0.0652 (14) | |
H9BA | 0.2501 | 0.0813 | 0.1281 | 0.078* | |
H9BB | 0.2463 | 0.0959 | 0.2469 | 0.078* | |
C11B | 0.0684 (2) | −0.2708 (6) | 0.1888 (5) | 0.0584 (12) | |
C12B | 0.1127 (3) | −0.3974 (6) | 0.1820 (8) | 0.0829 (18) | |
H12D | 0.0909 | −0.4895 | 0.1883 | 0.124* | |
H12E | 0.1422 | −0.3895 | 0.2357 | 0.124* | |
H12F | 0.1333 | −0.3944 | 0.1178 | 0.124* | |
C10B | 0.2255 (3) | 0.2861 (7) | 0.1742 (12) | 0.121 (3) | |
H10D | 0.2661 | 0.3249 | 0.1833 | 0.182* | |
H10E | 0.1988 | 0.3268 | 0.2249 | 0.182* | |
H10F | 0.2107 | 0.3128 | 0.1081 | 0.182* | |
H1NB | −0.0208 (19) | −0.115 (5) | 0.189 (4) | 0.045 (12)* | |
H1NA | 0.127 (2) | −0.104 (6) | 0.433 (5) | 0.056 (15)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1A | 0.0420 (15) | 0.066 (2) | 0.114 (3) | −0.0146 (13) | −0.003 (2) | −0.001 (2) |
F2A | 0.070 (2) | 0.079 (3) | 0.177 (5) | 0.0320 (18) | 0.000 (3) | −0.003 (3) |
O1A | 0.0297 (15) | 0.057 (2) | 0.111 (3) | −0.0035 (15) | −0.002 (2) | 0.005 (2) |
O2A | 0.052 (2) | 0.059 (2) | 0.104 (3) | −0.0139 (17) | 0.005 (3) | −0.002 (3) |
O3A | 0.0406 (18) | 0.073 (3) | 0.134 (4) | 0.0115 (18) | −0.006 (2) | 0.008 (3) |
N1A | 0.0301 (16) | 0.051 (2) | 0.069 (3) | −0.0065 (17) | −0.004 (2) | −0.001 (2) |
N2A | 0.0309 (18) | 0.056 (2) | 0.056 (2) | −0.0023 (17) | −0.002 (2) | 0.001 (2) |
C1A | 0.038 (2) | 0.059 (4) | 0.095 (4) | −0.007 (2) | 0.000 (3) | 0.005 (4) |
C2A | 0.055 (3) | 0.058 (3) | 0.098 (4) | −0.002 (2) | 0.002 (4) | −0.002 (4) |
C3A | 0.053 (3) | 0.066 (4) | 0.095 (4) | 0.019 (3) | 0.002 (4) | −0.003 (4) |
C4A | 0.039 (2) | 0.075 (4) | 0.076 (3) | 0.004 (2) | 0.000 (3) | 0.004 (4) |
C5A | 0.036 (2) | 0.059 (3) | 0.059 (3) | −0.004 (2) | −0.003 (3) | 0.003 (3) |
C6A | 0.032 (2) | 0.054 (3) | 0.054 (3) | −0.0031 (19) | −0.002 (3) | 0.001 (3) |
C7A | 0.036 (2) | 0.048 (2) | 0.061 (3) | −0.0008 (19) | 0.000 (3) | 0.000 (3) |
C8A | 0.037 (2) | 0.061 (3) | 0.061 (3) | −0.001 (2) | −0.002 (3) | 0.003 (3) |
C9A | 0.033 (2) | 0.076 (4) | 0.097 (4) | −0.010 (2) | −0.003 (3) | −0.006 (4) |
C11A | 0.058 (3) | 0.051 (3) | 0.072 (3) | −0.002 (2) | 0.000 (3) | 0.003 (3) |
C12A | 0.077 (5) | 0.049 (3) | 0.185 (9) | 0.007 (3) | 0.004 (6) | −0.008 (6) |
C10A | 0.062 (4) | 0.084 (5) | 0.191 (11) | −0.021 (4) | 0.000 (5) | 0.006 (6) |
F1B | 0.0406 (15) | 0.0605 (17) | 0.105 (2) | −0.0105 (13) | −0.004 (2) | 0.003 (2) |
F2B | 0.073 (2) | 0.078 (2) | 0.175 (4) | 0.0353 (17) | 0.001 (3) | 0.003 (3) |
O1B | 0.0300 (15) | 0.055 (2) | 0.099 (3) | −0.0035 (13) | −0.001 (2) | 0.003 (2) |
O2B | 0.048 (2) | 0.057 (2) | 0.139 (4) | −0.0121 (16) | 0.006 (3) | 0.004 (3) |
O3B | 0.0375 (17) | 0.065 (2) | 0.124 (4) | 0.0095 (15) | −0.001 (2) | 0.005 (3) |
N1B | 0.0292 (17) | 0.046 (2) | 0.072 (2) | −0.0036 (15) | −0.003 (2) | 0.000 (3) |
N2B | 0.0308 (16) | 0.058 (2) | 0.055 (2) | −0.0046 (16) | −0.001 (2) | 0.000 (2) |
C1B | 0.042 (3) | 0.055 (3) | 0.089 (4) | −0.005 (2) | −0.002 (3) | −0.007 (3) |
C2B | 0.051 (3) | 0.056 (3) | 0.112 (5) | 0.002 (2) | −0.005 (4) | −0.001 (4) |
C3B | 0.052 (3) | 0.059 (3) | 0.093 (4) | 0.015 (2) | −0.002 (4) | −0.007 (4) |
C4B | 0.041 (2) | 0.069 (3) | 0.072 (3) | 0.002 (2) | −0.004 (3) | 0.001 (3) |
C5B | 0.039 (2) | 0.052 (3) | 0.056 (3) | −0.001 (2) | −0.006 (3) | −0.001 (3) |
C6B | 0.033 (2) | 0.050 (2) | 0.051 (2) | −0.0036 (17) | −0.003 (3) | 0.001 (3) |
C7B | 0.037 (2) | 0.048 (2) | 0.055 (3) | −0.0013 (19) | −0.001 (3) | 0.003 (3) |
C8B | 0.036 (2) | 0.052 (3) | 0.058 (3) | 0.0005 (19) | −0.001 (3) | 0.006 (3) |
C9B | 0.028 (2) | 0.075 (3) | 0.093 (4) | −0.009 (2) | −0.001 (3) | 0.000 (4) |
C11B | 0.051 (3) | 0.055 (3) | 0.069 (3) | −0.005 (2) | −0.001 (3) | −0.002 (3) |
C12B | 0.064 (3) | 0.049 (3) | 0.136 (5) | 0.001 (3) | −0.009 (5) | 0.002 (5) |
C10B | 0.069 (4) | 0.063 (4) | 0.232 (10) | −0.026 (3) | −0.017 (7) | 0.000 (7) |
F1A—C5A | 1.345 (6) | F1B—C5B | 1.350 (5) |
F2A—C3A | 1.362 (6) | F2B—C3B | 1.360 (6) |
O1A—C8A | 1.320 (7) | O1B—C8B | 1.324 (6) |
O1A—C9A | 1.460 (6) | O1B—C9B | 1.450 (5) |
O2A—C11A | 1.236 (6) | O2B—C11B | 1.241 (6) |
O3A—C8A | 1.208 (6) | O3B—C8B | 1.194 (6) |
N1A—N2A | 1.306 (5) | N1B—N2B | 1.315 (5) |
N1A—C6A | 1.403 (6) | N1B—C6B | 1.396 (6) |
N1A—H1NA | 0.86 (6) | N1B—H1NB | 0.92 (5) |
N2A—C7A | 1.321 (6) | N2B—C7B | 1.310 (6) |
C1A—C2A | 1.379 (8) | C1B—C2B | 1.364 (8) |
C1A—C6A | 1.389 (7) | C1B—C6B | 1.392 (7) |
C1A—H1AA | 0.9300 | C1B—H1BA | 0.9300 |
C2A—C3A | 1.373 (8) | C2B—C3B | 1.379 (7) |
C2A—H2AA | 0.9300 | C2B—H2BA | 0.9300 |
C3A—C4A | 1.365 (8) | C3B—C4B | 1.365 (8) |
C4A—C5A | 1.370 (7) | C4B—C5B | 1.381 (7) |
C4A—H4AA | 0.9300 | C4B—H4BA | 0.9300 |
C5A—C6A | 1.375 (6) | C5B—C6B | 1.383 (6) |
C7A—C11A | 1.469 (7) | C7B—C11B | 1.479 (7) |
C7A—C8A | 1.485 (7) | C7B—C8B | 1.492 (6) |
C9A—C10A | 1.495 (10) | C9B—C10B | 1.464 (8) |
C9A—H9AA | 0.9700 | C9B—H9BA | 0.9700 |
C9A—H9AB | 0.9700 | C9B—H9BB | 0.9700 |
C11A—C12A | 1.488 (8) | C11B—C12B | 1.497 (7) |
C12A—H12A | 0.9600 | C12B—H12D | 0.9600 |
C12A—H12B | 0.9600 | C12B—H12E | 0.9600 |
C12A—H12C | 0.9600 | C12B—H12F | 0.9600 |
C10A—H10A | 0.9600 | C10B—H10D | 0.9600 |
C10A—H10B | 0.9600 | C10B—H10E | 0.9600 |
C10A—H10C | 0.9600 | C10B—H10F | 0.9600 |
C8A—O1A—C9A | 116.1 (4) | C8B—O1B—C9B | 117.3 (3) |
N2A—N1A—C6A | 119.6 (4) | N2B—N1B—C6B | 119.1 (4) |
N2A—N1A—H1NA | 120 (3) | N2B—N1B—H1NB | 115 (3) |
C6A—N1A—H1NA | 121 (3) | C6B—N1B—H1NB | 126 (3) |
N1A—N2A—C7A | 120.8 (4) | C7B—N2B—N1B | 121.2 (4) |
C2A—C1A—C6A | 120.3 (5) | C2B—C1B—C6B | 120.8 (5) |
C2A—C1A—H1AA | 119.9 | C2B—C1B—H1BA | 119.6 |
C6A—C1A—H1AA | 119.9 | C6B—C1B—H1BA | 119.6 |
C3A—C2A—C1A | 118.2 (5) | C1B—C2B—C3B | 118.5 (5) |
C3A—C2A—H2AA | 120.9 | C1B—C2B—H2BA | 120.7 |
C1A—C2A—H2AA | 120.9 | C3B—C2B—H2BA | 120.7 |
F2A—C3A—C4A | 117.7 (5) | F2B—C3B—C4B | 118.0 (5) |
F2A—C3A—C2A | 118.8 (5) | F2B—C3B—C2B | 118.3 (5) |
C4A—C3A—C2A | 123.5 (5) | C4B—C3B—C2B | 123.5 (5) |
C3A—C4A—C5A | 116.7 (5) | C3B—C4B—C5B | 116.3 (4) |
C3A—C4A—H4AA | 121.6 | C3B—C4B—H4BA | 121.9 |
C5A—C4A—H4AA | 121.6 | C5B—C4B—H4BA | 121.9 |
F1A—C5A—C4A | 119.8 (4) | F1B—C5B—C4B | 119.3 (4) |
F1A—C5A—C6A | 117.4 (4) | F1B—C5B—C6B | 117.9 (4) |
C4A—C5A—C6A | 122.8 (5) | C4B—C5B—C6B | 122.8 (4) |
C5A—C6A—C1A | 118.5 (5) | C5B—C6B—C1B | 118.0 (4) |
C5A—C6A—N1A | 118.7 (4) | C5B—C6B—N1B | 118.1 (4) |
C1A—C6A—N1A | 122.8 (4) | C1B—C6B—N1B | 123.8 (4) |
N2A—C7A—C11A | 123.6 (4) | N2B—C7B—C11B | 123.8 (4) |
N2A—C7A—C8A | 113.8 (4) | N2B—C7B—C8B | 114.2 (4) |
C11A—C7A—C8A | 122.6 (4) | C11B—C7B—C8B | 122.0 (4) |
O3A—C8A—O1A | 123.1 (5) | O3B—C8B—O1B | 123.0 (4) |
O3A—C8A—C7A | 123.9 (5) | O3B—C8B—C7B | 125.1 (5) |
O1A—C8A—C7A | 113.0 (4) | O1B—C8B—C7B | 111.9 (4) |
O1A—C9A—C10A | 107.3 (5) | O1B—C9B—C10B | 108.2 (4) |
O1A—C9A—H9AA | 110.3 | O1B—C9B—H9BA | 110.1 |
C10A—C9A—H9AA | 110.3 | C10B—C9B—H9BA | 110.1 |
O1A—C9A—H9AB | 110.3 | O1B—C9B—H9BB | 110.1 |
C10A—C9A—H9AB | 110.3 | C10B—C9B—H9BB | 110.1 |
H9AA—C9A—H9AB | 108.5 | H9BA—C9B—H9BB | 108.4 |
O2A—C11A—C7A | 119.6 (5) | O2B—C11B—C7B | 118.4 (5) |
O2A—C11A—C12A | 118.6 (5) | O2B—C11B—C12B | 120.0 (5) |
C7A—C11A—C12A | 121.8 (5) | C7B—C11B—C12B | 121.6 (4) |
C11A—C12A—H12A | 109.5 | C11B—C12B—H12D | 109.5 |
C11A—C12A—H12B | 109.5 | C11B—C12B—H12E | 109.5 |
H12A—C12A—H12B | 109.5 | H12D—C12B—H12E | 109.5 |
C11A—C12A—H12C | 109.5 | C11B—C12B—H12F | 109.5 |
H12A—C12A—H12C | 109.5 | H12D—C12B—H12F | 109.5 |
H12B—C12A—H12C | 109.5 | H12E—C12B—H12F | 109.5 |
C9A—C10A—H10A | 109.5 | C9B—C10B—H10D | 109.5 |
C9A—C10A—H10B | 109.5 | C9B—C10B—H10E | 109.5 |
H10A—C10A—H10B | 109.5 | H10D—C10B—H10E | 109.5 |
C9A—C10A—H10C | 109.5 | C9B—C10B—H10F | 109.5 |
H10A—C10A—H10C | 109.5 | H10D—C10B—H10F | 109.5 |
H10B—C10A—H10C | 109.5 | H10E—C10B—H10F | 109.5 |
C6A—N1A—N2A—C7A | 179.7 (6) | C6B—N1B—N2B—C7B | −178.9 (6) |
C6A—C1A—C2A—C3A | 0.0 (12) | C6B—C1B—C2B—C3B | 1.4 (12) |
C1A—C2A—C3A—F2A | 179.3 (7) | C1B—C2B—C3B—F2B | −178.4 (7) |
C1A—C2A—C3A—C4A | −0.2 (13) | C1B—C2B—C3B—C4B | −2.6 (13) |
F2A—C3A—C4A—C5A | −178.9 (7) | F2B—C3B—C4B—C5B | 179.2 (7) |
C2A—C3A—C4A—C5A | 0.7 (12) | C2B—C3B—C4B—C5B | 3.3 (12) |
C3A—C4A—C5A—F1A | −180.0 (7) | C3B—C4B—C5B—F1B | −179.9 (6) |
C3A—C4A—C5A—C6A | −1.0 (10) | C3B—C4B—C5B—C6B | −3.0 (11) |
F1A—C5A—C6A—C1A | 179.8 (6) | F1B—C5B—C6B—C1B | 178.9 (6) |
C4A—C5A—C6A—C1A | 0.9 (10) | C4B—C5B—C6B—C1B | 1.9 (10) |
F1A—C5A—C6A—N1A | −1.3 (9) | F1B—C5B—C6B—N1B | −3.5 (9) |
C4A—C5A—C6A—N1A | 179.7 (6) | C4B—C5B—C6B—N1B | 179.5 (6) |
C2A—C1A—C6A—C5A | −0.4 (10) | C2B—C1B—C6B—C5B | −1.1 (11) |
C2A—C1A—C6A—N1A | −179.2 (7) | C2B—C1B—C6B—N1B | −178.5 (7) |
N2A—N1A—C6A—C5A | −179.7 (5) | N2B—N1B—C6B—C5B | 179.8 (6) |
N2A—N1A—C6A—C1A | −0.8 (9) | N2B—N1B—C6B—C1B | −2.7 (10) |
N1A—N2A—C7A—C11A | −0.1 (10) | N1B—N2B—C7B—C11B | 1.7 (9) |
N1A—N2A—C7A—C8A | −179.9 (5) | N1B—N2B—C7B—C8B | −179.3 (5) |
C9A—O1A—C8A—O3A | −0.3 (10) | C9B—O1B—C8B—O3B | −1.4 (9) |
C9A—O1A—C8A—C7A | 179.6 (6) | C9B—O1B—C8B—C7B | 178.4 (6) |
N2A—C7A—C8A—O3A | 169.7 (7) | N2B—C7B—C8B—O3B | 177.5 (6) |
C11A—C7A—C8A—O3A | −10.1 (11) | C11B—C7B—C8B—O3B | −3.4 (10) |
N2A—C7A—C8A—O1A | −10.2 (9) | N2B—C7B—C8B—O1B | −2.3 (8) |
C11A—C7A—C8A—O1A | 170.0 (6) | C11B—C7B—C8B—O1B | 176.8 (5) |
C8A—O1A—C9A—C10A | 173.4 (6) | C8B—O1B—C9B—C10B | 179.4 (8) |
N2A—C7A—C11A—O2A | 0.5 (11) | N2B—C7B—C11B—O2B | −5.7 (10) |
C8A—C7A—C11A—O2A | −179.8 (7) | C8B—C7B—C11B—O2B | 175.2 (6) |
N2A—C7A—C11A—C12A | 178.7 (8) | N2B—C7B—C11B—C12B | 173.8 (7) |
C8A—C7A—C11A—C12A | −1.6 (12) | C8B—C7B—C11B—C12B | −5.2 (11) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1B—H1NB···O2B | 0.92 (4) | 1.78 (4) | 2.541 (5) | 138 (4) |
N1A—H1NA···O2A | 0.86 (5) | 1.88 (5) | 2.547 (6) | 133 (4) |
C2A—H2AA···O2Ai | 0.93 | 2.58 | 3.476 (7) | 163 |
C4A—H4AA···O3Aii | 0.93 | 2.45 | 3.375 (6) | 173 |
C2B—H2BA···O2Bi | 0.93 | 2.54 | 3.449 (6) | 166 |
C4B—H4BA···O3Bii | 0.93 | 2.46 | 3.380 (6) | 170 |
C10A—H10A···F2Aiii | 0.96 | 2.54 | 3.343 (9) | 141 |
C10B—H10D···F2Biii | 0.96 | 2.48 | 3.330 (7) | 148 |
Symmetry codes: (i) x, y+1, z; (ii) x−1/2, −y, z; (iii) x+1/2, −y+1, z. |
Experimental details
Crystal data | |
Chemical formula | C12H12F2N2O3 |
Mr | 270.24 |
Crystal system, space group | Orthorhombic, Pca21 |
Temperature (K) | 296 |
a, b, c (Å) | 21.814 (4), 9.0079 (15), 13.188 (2) |
V (Å3) | 2591.4 (8) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.38 × 0.32 × 0.31 |
Data collection | |
Diffractometer | Bruker SMART APEXII DUO CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.957, 0.964 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14829, 3855, 1903 |
Rint | 0.058 |
(sin θ/λ)max (Å−1) | 0.701 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.065, 0.219, 1.02 |
No. of reflections | 3855 |
No. of parameters | 356 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.22, −0.24 |
Absolute structure | Flack (1983), 3406 Friedel pairs |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1B—H1NB···O2B | 0.92 (4) | 1.78 (4) | 2.541 (5) | 138 (4) |
N1A—H1NA···O2A | 0.86 (5) | 1.88 (5) | 2.547 (6) | 133 (4) |
C2A—H2AA···O2Ai | 0.93 | 2.58 | 3.476 (7) | 163 |
C4A—H4AA···O3Aii | 0.93 | 2.45 | 3.375 (6) | 173 |
C2B—H2BA···O2Bi | 0.93 | 2.54 | 3.449 (6) | 166 |
C4B—H4BA···O3Bii | 0.93 | 2.46 | 3.380 (6) | 170 |
C10A—H10A···F2Aiii | 0.96 | 2.54 | 3.343 (9) | 141 |
C10B—H10D···F2Biii | 0.96 | 2.48 | 3.330 (7) | 148 |
Symmetry codes: (i) x, y+1, z; (ii) x−1/2, −y, z; (iii) x+1/2, −y+1, z. |
Acknowledgements
HKF and CKQ thank Universiti Sains Malaysia for the Research University Grant (No. 1001/PFIZIK/811160).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Derivatives of oxobutanoates are biologically important. 4-Methylthio-2- oxobutanoate was identified in the culture fluids of a range of bacteria, e.g. the yeast Saccharomyces cerevisiae and the fungus Penicillium digitatum (Billington et al., 1979). Some oxobutanoates exhibit cytotoxic properties (Stancho et al., 2008). Pyrazole derivatives are well established in the literatures as important biologically effective heterocyclic compounds (Rai et al., 2008). These derivatives are the subject of many research studies due to their widespread pharmacological activities such as anti-inflammatory (Girisha et al., 2010), antipyretic, antimicrobial (Isloor et al., 2009), and antiviral activities. The widely prescribed anti-inflammatory pyrazole derivatives, celecoxib and deracoxib, are selective COX-2 inhibitors with reduced ulcerogenic side effects. The title compound (I), ethyl-2-[(2,4-difluorophenyl)hydrazinylidene]-3-oxobutanoate, is an intermediate in the preparation of pyrazole derivative. Condensation of oxobutanoate with thiosemicarbazide in glacial acetic acid medium gave the required pyrazole derivatives.
The asymmetric unit of (I) contains two independent molecules (Fig. 1), A and B, with comparable geometries. Both molecules exist in trans conformations with respect to the C7═N2 bonds [C7A═N2A = 1.321 (6) Å, C7B═N2B = 1.310 (6) Å]. The crystal studied was an inversion twin with a 0.58 (1):0.42 (1) domain ratio. The bond lengths (Allen et al., 1987) and angles in the title compound are within normal ranges. The molecular structure is stabilized by intramolecular N1A–H1NA···O2A and N1B–H1NB···O2B hydrogen bonds which generate S(6) ring motifs (Bernstein et al., 1995).
In the crystal (Fig. 2), molecules are linked via C2A–H2AA···O2A, C4A–H4AA···O3A, C10A–H10A···F2A, C2B–H2BA···O2B, C4B–H4BA···O3B and C10B–H10D···F2B hydrogen bonds (Table 1) into infinite sheets lying parallel to the (001) plane.