organic compounds
4-(5-Oxo-5H-1,2,4-dithiazol-3-yl)phenyl 4-methylbenzenesulfonate
aState Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu 610041, People's Republic of China
*Correspondence e-mail: luo_youfu@scu.edu.cn
In the molecular structure of the title compound, C15H11NO4S3, the 1,2,4-dithiazolone and central benzene rings are approximately coplanar, making a dihedral angle of 3.08 (7)°. The central benzene ring and the 4-methylbenzene ring subtend a dihedral angle of 57.47 (8)°. In the crystal, π–π stacking occurs between the central benzene ring and the 1,2,4-dithiazolone ring of adjacent molecules, which are aligned almost parallel, the centroid–centroid distance being 3.555 (7) Å.
Related literature
For the synthesis of related compounds, see: Cho et al. (2003); Chen et al. (1996). For their biological activity, see: Iwakawa et al. (1994).
Experimental
Crystal data
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Data collection: CrysAlis PRO (Agilent, 2010); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2.
Supporting information
10.1107/S1600536811055607/im2348sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811055607/im2348Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811055607/im2348Isup3.cml
To a solution of 4-hydroxybenzothioamide (19.10 mmol) in chloroform (20 ml) at 273 K was added pyridine (3.70 ml, 45.84 mmol) dropwise over a period of 20 min and then p-toluenesulfonyl chloride (22.92 mmol) in small portions. This reaction mixture was stirred at room temperature for 12 h and diluted with dichloromethane and then 10% aqueous HCl. The separated organic layer was washed with 10% aqueous HCl, water and saturated aqueous NaCl. The organic phase was then dried over Na2SO4 and concentrated in vacuo. Recrystallization from EtOAc afforded 4-carbamothioylphenyl 4-methylbenzenesulfonate. To the solution of 4-carbamothioylphenyl 4-methylbenzenesulfonate (2 mmol) in THF (10 ml) was added chlorocarbonyl sulfenyl chloride (350 µL, 4 mmol). The mixture was stirred at ambient temperature for 16 h. The solvent was removed in vacuo and the residue was purified by silica-gel
using EtOAc/hexane as solvent system to get the title compound. Crystals suitable for X-ray analysis were obtained by slow evaporation from a solution in EtOAc at room temperature.H atoms were positioned geometrically and refined using a riding model with C—H = 0.95 Å and Uiso(H) = 1.2Ueq(C) for aromatic H atoms and C—H = 0.98 Å and Uiso(H) = 1.5Ueq(C) for methyl H atoms.
Data collection: CrysAlis PRO (Agilent, 2010); cell
CrysAlis PRO (Agilent, 2010); data reduction: CrysAlis PRO (Agilent, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).Fig. 1. Molecular structure of the title compound with displacement ellipsoids drawn at the 30% probability level. | |
Fig. 2. Crystal structure of the title compound. |
C15H11NO4S3 | Dx = 1.544 Mg m−3 |
Mr = 365.43 | Mo Kα radiation, λ = 0.7107 Å |
Orthorhombic, Pbcn | Cell parameters from 3356 reflections |
a = 30.2449 (9) Å | θ = 2.9–28.8° |
b = 7.0841 (3) Å | µ = 0.49 mm−1 |
c = 14.6755 (5) Å | T = 145 K |
V = 3144.36 (18) Å3 | Block, colorless |
Z = 8 | 0.25 × 0.20 × 0.20 mm |
F(000) = 1504 |
Agilent Xcalibur Eos diffractometer | 2775 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 2355 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
Detector resolution: 16.0874 pixels mm-1 | θmax = 25.0°, θmin = 3.0° |
ω scans | h = −33→35 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | k = −6→8 |
Tmin = 0.952, Tmax = 1.000 | l = −10→17 |
6725 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.078 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0338P)2 + 1.4416P] where P = (Fo2 + 2Fc2)/3 |
2775 reflections | (Δ/σ)max = 0.001 |
209 parameters | Δρmax = 0.41 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
C15H11NO4S3 | V = 3144.36 (18) Å3 |
Mr = 365.43 | Z = 8 |
Orthorhombic, Pbcn | Mo Kα radiation |
a = 30.2449 (9) Å | µ = 0.49 mm−1 |
b = 7.0841 (3) Å | T = 145 K |
c = 14.6755 (5) Å | 0.25 × 0.20 × 0.20 mm |
Agilent Xcalibur Eos diffractometer | 2775 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | 2355 reflections with I > 2σ(I) |
Tmin = 0.952, Tmax = 1.000 | Rint = 0.022 |
6725 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.078 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.41 e Å−3 |
2775 reflections | Δρmin = −0.29 e Å−3 |
209 parameters |
Experimental. CrysAlisPro, Agilent Technologies, Version 1.171.35.11 (release 16-05-2011 CrysAlis171 .NET) (compiled May 16 2011,17:55:39) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | −0.163728 (17) | 0.52253 (8) | 0.56985 (4) | 0.03114 (16) | |
S2 | 0.060198 (17) | 0.13631 (7) | 0.67063 (4) | 0.02683 (15) | |
S3 | 0.094456 (17) | −0.09859 (7) | 0.70721 (4) | 0.02913 (15) | |
O1 | −0.20211 (5) | 0.5638 (2) | 0.51776 (12) | 0.0445 (4) | |
O2 | −0.13702 (5) | 0.6722 (2) | 0.60383 (12) | 0.0418 (4) | |
O3 | 0.05762 (5) | −0.4287 (2) | 0.68332 (12) | 0.0405 (4) | |
O4 | −0.13468 (5) | 0.3962 (2) | 0.50138 (10) | 0.0308 (4) | |
N2 | 0.01393 (5) | −0.1767 (2) | 0.63961 (12) | 0.0252 (4) | |
C1 | −0.17634 (6) | 0.3654 (3) | 0.65777 (15) | 0.0255 (5) | |
C2 | −0.15800 (7) | 0.3921 (3) | 0.74340 (16) | 0.0312 (5) | |
H2 | −0.1378 | 0.4924 | 0.7540 | 0.037* | |
C3 | −0.16952 (7) | 0.2713 (4) | 0.81257 (16) | 0.0379 (6) | |
H3 | −0.1574 | 0.2903 | 0.8716 | 0.045* | |
C4 | −0.19842 (7) | 0.1220 (4) | 0.79851 (17) | 0.0388 (6) | |
C5 | −0.21578 (7) | 0.0968 (3) | 0.71170 (18) | 0.0402 (6) | |
H5 | −0.2353 | −0.0057 | 0.7007 | 0.048* | |
C6 | −0.20530 (7) | 0.2173 (3) | 0.64109 (16) | 0.0324 (5) | |
H6 | −0.2177 | 0.1993 | 0.5822 | 0.039* | |
C7 | −0.21083 (9) | −0.0087 (5) | 0.8753 (2) | 0.0632 (9) | |
H7A | −0.2430 | −0.0261 | 0.8761 | 0.095* | |
H7B | −0.2012 | 0.0460 | 0.9333 | 0.095* | |
H7C | −0.1964 | −0.1311 | 0.8664 | 0.095* | |
C8 | −0.09673 (6) | 0.3042 (3) | 0.53602 (14) | 0.0249 (5) | |
C9 | −0.05942 (6) | 0.4055 (3) | 0.55942 (15) | 0.0287 (5) | |
H9 | −0.0588 | 0.5390 | 0.5535 | 0.034* | |
C10 | −0.02302 (7) | 0.3088 (3) | 0.59164 (15) | 0.0275 (5) | |
H10 | 0.0028 | 0.3762 | 0.6091 | 0.033* | |
C11 | −0.02389 (6) | 0.1121 (3) | 0.59875 (13) | 0.0218 (4) | |
C12 | −0.06182 (6) | 0.0141 (3) | 0.57370 (14) | 0.0245 (4) | |
H12 | −0.0625 | −0.1197 | 0.5780 | 0.029* | |
C13 | −0.09845 (7) | 0.1102 (3) | 0.54266 (14) | 0.0264 (5) | |
H13 | −0.1245 | 0.0437 | 0.5261 | 0.032* | |
C14 | 0.01431 (6) | 0.0060 (3) | 0.63420 (13) | 0.0224 (4) | |
C15 | 0.05148 (7) | −0.2615 (3) | 0.67444 (15) | 0.0282 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0248 (3) | 0.0286 (3) | 0.0401 (3) | 0.0061 (2) | 0.0028 (2) | 0.0039 (3) |
S2 | 0.0256 (3) | 0.0214 (3) | 0.0335 (3) | 0.0013 (2) | −0.0051 (2) | −0.0017 (2) |
S3 | 0.0264 (3) | 0.0249 (3) | 0.0361 (3) | 0.0036 (2) | −0.0070 (2) | −0.0011 (2) |
O1 | 0.0302 (8) | 0.0534 (11) | 0.0498 (11) | 0.0164 (8) | −0.0020 (8) | 0.0137 (9) |
O2 | 0.0383 (9) | 0.0240 (8) | 0.0631 (11) | −0.0013 (7) | 0.0100 (9) | −0.0006 (8) |
O3 | 0.0388 (9) | 0.0220 (8) | 0.0607 (11) | 0.0036 (7) | −0.0145 (9) | 0.0032 (8) |
O4 | 0.0254 (7) | 0.0375 (9) | 0.0297 (8) | 0.0089 (6) | −0.0002 (7) | 0.0033 (7) |
N2 | 0.0254 (9) | 0.0224 (9) | 0.0279 (10) | 0.0009 (7) | −0.0009 (8) | 0.0009 (8) |
C1 | 0.0181 (10) | 0.0261 (11) | 0.0322 (11) | 0.0028 (8) | 0.0013 (9) | −0.0050 (9) |
C2 | 0.0237 (11) | 0.0336 (12) | 0.0362 (13) | −0.0027 (9) | −0.0021 (10) | −0.0091 (10) |
C3 | 0.0297 (12) | 0.0543 (16) | 0.0296 (12) | 0.0033 (11) | −0.0023 (11) | −0.0029 (11) |
C4 | 0.0259 (12) | 0.0476 (15) | 0.0428 (14) | 0.0008 (10) | 0.0059 (11) | 0.0102 (12) |
C5 | 0.0270 (12) | 0.0368 (13) | 0.0566 (16) | −0.0108 (10) | 0.0000 (11) | 0.0002 (12) |
C6 | 0.0255 (11) | 0.0347 (12) | 0.0369 (13) | −0.0022 (10) | −0.0040 (10) | −0.0060 (11) |
C7 | 0.0435 (15) | 0.081 (2) | 0.065 (2) | −0.0094 (15) | 0.0105 (15) | 0.0295 (17) |
C8 | 0.0214 (10) | 0.0319 (12) | 0.0215 (10) | 0.0066 (9) | 0.0007 (9) | 0.0013 (9) |
C9 | 0.0280 (11) | 0.0229 (11) | 0.0350 (12) | 0.0024 (9) | 0.0036 (10) | 0.0027 (10) |
C10 | 0.0221 (10) | 0.0275 (11) | 0.0329 (12) | −0.0001 (9) | −0.0001 (9) | −0.0009 (10) |
C11 | 0.0230 (10) | 0.0237 (11) | 0.0186 (10) | 0.0030 (8) | 0.0034 (8) | −0.0004 (8) |
C12 | 0.0259 (10) | 0.0230 (11) | 0.0247 (10) | −0.0002 (8) | 0.0027 (9) | −0.0016 (9) |
C13 | 0.0238 (10) | 0.0289 (12) | 0.0266 (11) | −0.0004 (9) | 0.0013 (9) | −0.0017 (9) |
C14 | 0.0223 (10) | 0.0263 (11) | 0.0185 (10) | 0.0002 (8) | 0.0030 (8) | −0.0025 (9) |
C15 | 0.0293 (11) | 0.0252 (12) | 0.0300 (11) | 0.0001 (9) | −0.0028 (10) | −0.0007 (9) |
S1—O1 | 1.4204 (16) | C4—C7 | 1.506 (3) |
S1—O2 | 1.4229 (16) | C5—H5 | 0.9500 |
S1—O4 | 1.6069 (15) | C5—C6 | 1.380 (3) |
S1—C1 | 1.746 (2) | C6—H6 | 0.9500 |
S2—S3 | 2.0325 (7) | C7—H7A | 0.9800 |
S2—C14 | 1.7506 (19) | C7—H7B | 0.9800 |
S3—C15 | 1.803 (2) | C7—H7C | 0.9800 |
O3—C15 | 1.206 (2) | C8—C9 | 1.381 (3) |
O4—C8 | 1.414 (2) | C8—C13 | 1.379 (3) |
N2—C14 | 1.297 (2) | C9—H9 | 0.9500 |
N2—C15 | 1.383 (3) | C9—C10 | 1.380 (3) |
C1—C2 | 1.387 (3) | C10—H10 | 0.9500 |
C1—C6 | 1.388 (3) | C10—C11 | 1.398 (3) |
C2—H2 | 0.9500 | C11—C12 | 1.390 (3) |
C2—C3 | 1.373 (3) | C11—C14 | 1.473 (3) |
C3—H3 | 0.9500 | C12—H12 | 0.9500 |
C3—C4 | 1.387 (3) | C12—C13 | 1.378 (3) |
C4—C5 | 1.390 (3) | C13—H13 | 0.9500 |
O1—S1—O2 | 119.95 (10) | C4—C7—H7B | 109.5 |
O1—S1—O4 | 103.00 (9) | C4—C7—H7C | 109.5 |
O1—S1—C1 | 110.51 (10) | H7A—C7—H7B | 109.5 |
O2—S1—O4 | 108.89 (9) | H7A—C7—H7C | 109.5 |
O2—S1—C1 | 109.88 (10) | H7B—C7—H7C | 109.5 |
O4—S1—C1 | 103.08 (9) | C9—C8—O4 | 120.89 (18) |
C14—S2—S3 | 93.04 (7) | C13—C8—O4 | 116.98 (18) |
C15—S3—S2 | 94.93 (7) | C13—C8—C9 | 122.11 (19) |
C8—O4—S1 | 118.39 (13) | C8—C9—H9 | 120.7 |
C14—N2—C15 | 116.67 (17) | C10—C9—C8 | 118.61 (19) |
C2—C1—S1 | 119.67 (16) | C10—C9—H9 | 120.7 |
C2—C1—C6 | 121.0 (2) | C9—C10—H10 | 119.8 |
C6—C1—S1 | 119.29 (17) | C9—C10—C11 | 120.38 (19) |
C1—C2—H2 | 120.6 | C11—C10—H10 | 119.8 |
C3—C2—C1 | 118.9 (2) | C10—C11—C14 | 121.35 (18) |
C3—C2—H2 | 120.6 | C12—C11—C10 | 119.56 (18) |
C2—C3—H3 | 119.2 | C12—C11—C14 | 119.07 (17) |
C2—C3—C4 | 121.7 (2) | C11—C12—H12 | 119.9 |
C4—C3—H3 | 119.2 | C13—C12—C11 | 120.30 (19) |
C3—C4—C5 | 118.2 (2) | C13—C12—H12 | 119.9 |
C3—C4—C7 | 121.0 (2) | C8—C13—H13 | 120.5 |
C5—C4—C7 | 120.9 (2) | C12—C13—C8 | 119.03 (19) |
C4—C5—H5 | 119.3 | C12—C13—H13 | 120.5 |
C6—C5—C4 | 121.5 (2) | N2—C14—S2 | 120.98 (15) |
C6—C5—H5 | 119.3 | N2—C14—C11 | 121.59 (17) |
C1—C6—H6 | 120.7 | C11—C14—S2 | 117.42 (14) |
C5—C6—C1 | 118.7 (2) | O3—C15—S3 | 119.25 (16) |
C5—C6—H6 | 120.7 | O3—C15—N2 | 126.36 (19) |
C4—C7—H7A | 109.5 | N2—C15—S3 | 114.38 (15) |
Experimental details
Crystal data | |
Chemical formula | C15H11NO4S3 |
Mr | 365.43 |
Crystal system, space group | Orthorhombic, Pbcn |
Temperature (K) | 145 |
a, b, c (Å) | 30.2449 (9), 7.0841 (3), 14.6755 (5) |
V (Å3) | 3144.36 (18) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.49 |
Crystal size (mm) | 0.25 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Agilent Xcalibur Eos diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2010) |
Tmin, Tmax | 0.952, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6725, 2775, 2355 |
Rint | 0.022 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.078, 1.04 |
No. of reflections | 2775 |
No. of parameters | 209 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.41, −0.29 |
Computer programs: CrysAlis PRO (Agilent, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), OLEX2 (Dolomanov et al., 2009).
Acknowledgements
We thank the Analytical and Testing Center of Sichuan University for the X-ray measurements.
References
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3H-1,2,4-dithiazol-3-one derivatives have been reported to posses antibacterial activity against a variety of bacteria and fungus strains including Staphylococcus aureus, Pasteurella piscicida and Botlytis cinerea (Iwakawa et al., 1994).
The molecular structure of the title compound is shown in Fig. 1. The central benzene ring is twisted away from the planes of the 3H-1,2,4-dithiazol-3-one and 4-methylbenzene rings by 3.08 (7) and 57.47 (8)°, respectively. In the crystal structure, intermolecular π-π stacking between central benzene rings and 3H-1,2,4-dithiazol-3-one rings of adjacent molecules which are aligned almost parallel {centroid–centroid distance = 3.555 (7) Å} are observed (Fig. 2).