organic compounds
3-(4-Chlorophenyl)-5-(thiophen-2-yl)-4,5-dihydro-1H-pyrazole-1-carbothioamide
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bCrystal Materials Research Unit, Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat-Yai, Songkhla 90112, Thailand
*Correspondence e-mail: hkfun@usm.my
In the title pyrazoline derivative, C14H12ClN3S2, the thiophene ring is disordered over two orientations with a refined site-occupancy ratio of 0.832 (4):0.168 (4). The pyrazoline ring adopts an with the C atom linking the thiophene ring at the flap. The dihedral angles between the benzene ring and the major and minor components of the thiophene ring are 88.6 (3) and 85.6 (15)°, respectively while the dihedral angle between the disorder components of the ring is 3.1 (16)°. The mean plane of the pyrazoline ring makes dihedral angles of 11.86 (13), 80.1 (3) and 83.0 (15)°, respectively, with the benzene ring, and the major and minor components of the thiophene ring. An intramolecular N(amide)—H⋯N(pyrazoline) hydrogen bond generates an S(5) ring motif. In the crystal, molecules are linked by weak C—H⋯S and N(amide)—H⋯S interactions into a tape along [10]. C—H⋯π interactions are also observed.
Related literature
For bond-length data, see: Allen et al. (1987). For hydrogen-bond motifs, see: Bernstein et al. (1995). For ring conformations, see: Cremer & Pople (1975). For related structures, see: Fun et al. (2011); Nonthason et al. (2011). For background to and applications of pyrazoline derivatives, see: Bai et al. (2007); Gong et al. (2011); Husain et al. (2008); Khode et al. (2009); Shoman et al. (2009); Taj et al. (2011). For the stability of the temperature controller, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811054754/is5024sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811054754/is5024Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811054754/is5024Isup3.cml
The title compound was synthesized by dissolving (E)-1-(4-chlorophenyl)-3-(2-thienyl)prop-2-en-1-one (0.25 g, 1.0 mmol) in a solution of KOH (0.06 g, 1.0 mmol) in ethanol (20 ml). An excess thiosemicarbazide (0.14 g, 1.5 mmol) in ethanol (20 ml) was then added, and the reaction mixture was vigorously stirred and refluxed for 4 h. The pale-yellow solid of the title compound obtained after cooling of the reaction was filtered off under vacuum. Pale yellow needle-shaped single crystals of the title compound suitable for X-ray
were recrystalized from CH3OH/CH2Cl2 (1:1 v/v) by slow evaporation of the solvent at room temperature after several days.Amide H atoms were located in a difference map and refined isotropically. The remaining H atoms were positioned geometrically and allowed to ride on their parent atoms, with d(C—H) = 0.95 Å for aromatic and 0.99 Å for CH2 atoms. The Uiso values were constrained to be 1.2Ueq of the carrier atoms. The thiophene ring is disordered over two positions with the refined site-occupancy ratio of 0.832 (4):0.168 (4). In the final
distances restraint was used. The highest residual electron density peak is located at 1.35 Å from Cl1 and the deepest hole is located at 0.52 Å from Cl1. The crystal was a pseudo-merohedral twin and the structure was refined with the (-1 0 0 0 -1 0 0 0 1). The BASF was refined to 0.138 (1).Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, showing 45% probability displacement ellipsoids and the atom-numbering scheme. Open bond show the minor B component. Intramolecular N—H···N hydrogen bond was shown as dash line. | |
Fig. 2. The crystal packing of the title compound viewed along the a axis. Only the major component was shown. For clarify, only H atoms involved in hydrogen bonds were shown. Hydrogen bonds were shown as dashed lines. |
C14H12ClN3S2 | F(000) = 664 |
Mr = 321.86 | Dx = 1.478 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 4206 reflections |
a = 6.7784 (3) Å | θ = 0.8–30.0° |
b = 25.2104 (11) Å | µ = 0.55 mm−1 |
c = 8.4628 (4) Å | T = 100 K |
β = 90.339 (2)° | Needle, pale-yellow |
V = 1446.15 (11) Å3 | 0.56 × 0.09 × 0.08 mm |
Z = 4 |
Bruker APEX DUO CCD area-detector diffractometer | 4206 independent reflections |
Radiation source: sealed tube | 3801 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.047 |
ϕ and ω scans | θmax = 30.0°, θmin = 0.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −9→9 |
Tmin = 0.749, Tmax = 0.958 | k = −35→35 |
32828 measured reflections | l = −11→11 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.138 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0644P)2 + 1.9543P] where P = (Fo2 + 2Fc2)/3 |
4206 reflections | (Δ/σ)max = 0.002 |
211 parameters | Δρmax = 0.33 e Å−3 |
10 restraints | Δρmin = −0.59 e Å−3 |
C14H12ClN3S2 | V = 1446.15 (11) Å3 |
Mr = 321.86 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 6.7784 (3) Å | µ = 0.55 mm−1 |
b = 25.2104 (11) Å | T = 100 K |
c = 8.4628 (4) Å | 0.56 × 0.09 × 0.08 mm |
β = 90.339 (2)° |
Bruker APEX DUO CCD area-detector diffractometer | 4206 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 3801 reflections with I > 2σ(I) |
Tmin = 0.749, Tmax = 0.958 | Rint = 0.047 |
32828 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 10 restraints |
wR(F2) = 0.138 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | Δρmax = 0.33 e Å−3 |
4206 reflections | Δρmin = −0.59 e Å−3 |
211 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cl1 | −0.33129 (11) | 0.74126 (3) | 0.43185 (9) | 0.02922 (17) | |
S2 | 0.81787 (10) | 1.01564 (3) | 0.70895 (8) | 0.02383 (16) | |
N1 | 0.5530 (3) | 0.93930 (8) | 0.6751 (3) | 0.0187 (4) | |
N2 | 0.4447 (3) | 0.90237 (8) | 0.5877 (2) | 0.0182 (4) | |
C9 | −0.0433 (4) | 0.85079 (10) | 0.6843 (3) | 0.0200 (5) | |
H9A | −0.0680 | 0.8721 | 0.7747 | 0.024* | |
N3 | 0.7384 (4) | 0.95592 (10) | 0.4561 (3) | 0.0264 (5) | |
C4 | 0.5995 (4) | 0.91382 (10) | 0.9528 (3) | 0.0190 (4) | |
S1A | 0.81128 (18) | 0.93898 (4) | 1.03729 (11) | 0.0196 (2) | 0.832 (4) |
C1A | 0.8584 (10) | 0.8815 (2) | 1.1384 (9) | 0.0242 (10) | 0.832 (4) |
H1AA | 0.9681 | 0.8764 | 1.2071 | 0.029* | 0.832 (4) |
C2A | 0.7184 (16) | 0.8437 (3) | 1.1078 (12) | 0.0289 (15) | 0.832 (4) |
H2AA | 0.7203 | 0.8090 | 1.1519 | 0.035* | 0.832 (4) |
C3A | 0.5701 (18) | 0.8623 (3) | 1.0024 (14) | 0.0263 (16) | 0.832 (4) |
H3AA | 0.4610 | 0.8413 | 0.9692 | 0.032* | 0.832 (4) |
S1B | 0.544 (2) | 0.8499 (4) | 0.9965 (18) | 0.0243 (19) | 0.168 (4) |
C1B | 0.751 (7) | 0.8414 (15) | 1.110 (8) | 0.038 (14)* | 0.168 (4) |
H1BA | 0.7880 | 0.8089 | 1.1588 | 0.046* | 0.168 (4) |
C2B | 0.856 (7) | 0.8873 (15) | 1.122 (7) | 0.041 (9)* | 0.168 (4) |
H2BA | 0.9726 | 0.8912 | 1.1832 | 0.049* | 0.168 (4) |
C3B | 0.770 (4) | 0.9289 (10) | 1.031 (4) | 0.041 (9)* | 0.168 (4) |
H3BA | 0.8240 | 0.9636 | 1.0250 | 0.049* | 0.168 (4) |
C5 | 0.4780 (4) | 0.94575 (10) | 0.8380 (3) | 0.0186 (4) | |
H5A | 0.4751 | 0.9840 | 0.8691 | 0.022* | |
C6 | 0.2675 (4) | 0.92375 (11) | 0.8167 (3) | 0.0210 (5) | |
H6A | 0.2293 | 0.9009 | 0.9067 | 0.025* | |
H6B | 0.1698 | 0.9527 | 0.8047 | 0.025* | |
C7 | 0.2870 (3) | 0.89198 (9) | 0.6660 (3) | 0.0170 (4) | |
C8 | 0.1379 (4) | 0.85466 (9) | 0.6075 (3) | 0.0174 (4) | |
C10 | −0.1881 (4) | 0.81612 (10) | 0.6300 (3) | 0.0207 (5) | |
H10A | −0.3117 | 0.8140 | 0.6819 | 0.025* | |
C11 | −0.1501 (4) | 0.78485 (10) | 0.4997 (3) | 0.0213 (5) | |
C12 | 0.0296 (4) | 0.78746 (11) | 0.4212 (3) | 0.0238 (5) | |
H12A | 0.0537 | 0.7655 | 0.3321 | 0.029* | |
C13 | 0.1730 (4) | 0.82256 (10) | 0.4750 (3) | 0.0219 (5) | |
H13A | 0.2957 | 0.8249 | 0.4217 | 0.026* | |
C14 | 0.6989 (4) | 0.96747 (10) | 0.6069 (3) | 0.0205 (5) | |
H1N3 | 0.673 (6) | 0.9294 (15) | 0.408 (5) | 0.030 (9)* | |
H2N3 | 0.851 (6) | 0.9675 (15) | 0.416 (4) | 0.032 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0269 (3) | 0.0216 (3) | 0.0391 (4) | −0.0052 (2) | −0.0061 (3) | −0.0048 (3) |
S2 | 0.0228 (3) | 0.0227 (3) | 0.0259 (3) | −0.0056 (2) | −0.0034 (2) | 0.0011 (2) |
N1 | 0.0178 (9) | 0.0199 (10) | 0.0183 (9) | −0.0026 (7) | −0.0012 (7) | −0.0010 (8) |
N2 | 0.0172 (9) | 0.0188 (9) | 0.0186 (9) | −0.0006 (7) | −0.0026 (7) | 0.0008 (7) |
C9 | 0.0199 (11) | 0.0196 (11) | 0.0204 (11) | 0.0018 (9) | −0.0006 (8) | −0.0018 (9) |
N3 | 0.0265 (11) | 0.0329 (13) | 0.0198 (10) | −0.0107 (10) | 0.0001 (9) | 0.0018 (9) |
C4 | 0.0185 (10) | 0.0215 (11) | 0.0171 (10) | −0.0012 (8) | 0.0002 (8) | −0.0041 (9) |
S1A | 0.0192 (4) | 0.0206 (4) | 0.0188 (4) | 0.0009 (4) | −0.0021 (3) | −0.0030 (3) |
C1A | 0.029 (2) | 0.024 (2) | 0.019 (2) | 0.0046 (15) | −0.0052 (13) | −0.0011 (15) |
C2A | 0.037 (3) | 0.023 (2) | 0.027 (3) | −0.003 (2) | −0.006 (2) | 0.0051 (14) |
C3A | 0.028 (3) | 0.027 (4) | 0.024 (2) | −0.009 (3) | −0.005 (2) | 0.000 (3) |
S1B | 0.026 (4) | 0.022 (4) | 0.025 (3) | −0.007 (3) | −0.007 (2) | 0.000 (3) |
C5 | 0.0171 (10) | 0.0196 (11) | 0.0191 (10) | −0.0004 (8) | 0.0004 (8) | −0.0037 (8) |
C6 | 0.0185 (11) | 0.0222 (11) | 0.0224 (11) | −0.0010 (9) | 0.0003 (9) | −0.0052 (9) |
C7 | 0.0172 (10) | 0.0163 (10) | 0.0174 (10) | 0.0007 (8) | −0.0031 (8) | 0.0001 (8) |
C8 | 0.0196 (11) | 0.0150 (10) | 0.0175 (10) | 0.0009 (8) | −0.0020 (8) | 0.0010 (8) |
C10 | 0.0182 (10) | 0.0182 (11) | 0.0257 (12) | −0.0002 (9) | −0.0008 (9) | 0.0008 (9) |
C11 | 0.0218 (11) | 0.0158 (10) | 0.0263 (12) | −0.0019 (9) | −0.0047 (9) | −0.0003 (9) |
C12 | 0.0270 (12) | 0.0211 (12) | 0.0231 (12) | −0.0001 (10) | −0.0027 (10) | −0.0062 (9) |
C13 | 0.0219 (11) | 0.0216 (11) | 0.0222 (11) | 0.0004 (10) | 0.0011 (9) | −0.0028 (9) |
C14 | 0.0200 (11) | 0.0213 (11) | 0.0201 (11) | −0.0015 (9) | −0.0029 (9) | 0.0045 (9) |
Cl1—C11 | 1.743 (3) | C2A—H2AA | 0.9500 |
S2—C14 | 1.692 (3) | C3A—H3AA | 0.9500 |
N1—C14 | 1.350 (3) | S1B—C1B | 1.71 (2) |
N1—N2 | 1.395 (3) | C1B—C2B | 1.363 (18) |
N1—C5 | 1.481 (3) | C1B—H1BA | 0.9500 |
N2—C7 | 1.288 (3) | C2B—C3B | 1.42 (2) |
C9—C10 | 1.390 (3) | C2B—H2BA | 0.9500 |
C9—C8 | 1.397 (3) | C3B—H3BA | 0.9500 |
C9—H9A | 0.9500 | C5—C6 | 1.541 (3) |
N3—C14 | 1.338 (3) | C5—H5A | 1.0000 |
N3—H1N3 | 0.90 (4) | C6—C7 | 1.512 (3) |
N3—H2N3 | 0.89 (4) | C6—H6A | 0.9900 |
C4—C3A | 1.379 (8) | C6—H6B | 0.9900 |
C4—C3B | 1.381 (18) | C7—C8 | 1.465 (3) |
C4—C5 | 1.503 (3) | C8—C13 | 1.405 (3) |
C4—S1B | 1.696 (10) | C10—C11 | 1.381 (4) |
C4—S1A | 1.721 (3) | C10—H10A | 0.9500 |
S1A—C1A | 1.713 (6) | C11—C12 | 1.392 (4) |
C1A—C2A | 1.368 (6) | C12—C13 | 1.389 (4) |
C1A—H1AA | 0.9500 | C12—H12A | 0.9500 |
C2A—C3A | 1.421 (12) | C13—H13A | 0.9500 |
C14—N1—N2 | 120.6 (2) | C4—C3B—H3BA | 123.4 |
C14—N1—C5 | 126.6 (2) | C2B—C3B—H3BA | 123.4 |
N2—N1—C5 | 112.60 (19) | N1—C5—C4 | 110.7 (2) |
C7—N2—N1 | 107.4 (2) | N1—C5—C6 | 100.05 (19) |
C10—C9—C8 | 120.7 (2) | C4—C5—C6 | 112.7 (2) |
C10—C9—H9A | 119.6 | N1—C5—H5A | 111.0 |
C8—C9—H9A | 119.6 | C4—C5—H5A | 111.0 |
C14—N3—H1N3 | 120 (3) | C6—C5—H5A | 111.0 |
C14—N3—H2N3 | 118 (3) | C7—C6—C5 | 101.7 (2) |
H1N3—N3—H2N3 | 119 (4) | C7—C6—H6A | 111.4 |
C3A—C4—C3B | 103.6 (13) | C5—C6—H6A | 111.4 |
C3A—C4—C5 | 128.4 (5) | C7—C6—H6B | 111.4 |
C3B—C4—C5 | 128.0 (11) | C5—C6—H6B | 111.4 |
C3B—C4—S1B | 110.0 (11) | H6A—C6—H6B | 109.3 |
C5—C4—S1B | 121.9 (5) | N2—C7—C8 | 122.0 (2) |
C3A—C4—S1A | 110.0 (5) | N2—C7—C6 | 113.8 (2) |
C5—C4—S1A | 121.56 (18) | C8—C7—C6 | 124.2 (2) |
S1B—C4—S1A | 116.4 (5) | C9—C8—C13 | 119.0 (2) |
C1A—S1A—C4 | 92.7 (2) | C9—C8—C7 | 119.6 (2) |
C2A—C1A—S1A | 111.6 (4) | C13—C8—C7 | 121.4 (2) |
C2A—C1A—H1AA | 124.2 | C11—C10—C9 | 119.2 (2) |
S1A—C1A—H1AA | 124.2 | C11—C10—H10A | 120.4 |
C1A—C2A—C3A | 112.1 (5) | C9—C10—H10A | 120.4 |
C1A—C2A—H2AA | 124.0 | C10—C11—C12 | 121.4 (2) |
C3A—C2A—H2AA | 124.0 | C10—C11—Cl1 | 119.3 (2) |
C4—C3A—C2A | 113.5 (6) | C12—C11—Cl1 | 119.3 (2) |
C4—C3A—H3AA | 123.2 | C13—C12—C11 | 119.1 (2) |
C2A—C3A—H3AA | 123.2 | C13—C12—H12A | 120.4 |
C4—S1B—C1B | 93.5 (11) | C11—C12—H12A | 120.4 |
C2B—C1B—S1B | 111.0 (19) | C12—C13—C8 | 120.5 (2) |
C2B—C1B—H1BA | 124.5 | C12—C13—H13A | 119.8 |
S1B—C1B—H1BA | 124.5 | C8—C13—H13A | 119.8 |
C1B—C2B—C3B | 112 (2) | N3—C14—N1 | 116.4 (2) |
C1B—C2B—H2BA | 124.0 | N3—C14—S2 | 123.1 (2) |
C3B—C2B—H2BA | 124.0 | N1—C14—S2 | 120.50 (19) |
C4—C3B—C2B | 113.3 (17) | ||
C14—N1—N2—C7 | −163.4 (2) | S1B—C4—C5—N1 | −89.2 (7) |
C5—N1—N2—C7 | 12.0 (3) | S1A—C4—C5—N1 | 86.6 (2) |
C3A—C4—S1A—C1A | −0.4 (7) | C3A—C4—C5—C6 | 20.2 (8) |
C3B—C4—S1A—C1A | 9 (13) | C3B—C4—C5—C6 | −161.3 (19) |
C5—C4—S1A—C1A | −178.3 (4) | S1B—C4—C5—C6 | 21.9 (7) |
S1B—C4—S1A—C1A | −2.2 (7) | S1A—C4—C5—C6 | −162.34 (18) |
C4—S1A—C1A—C2A | 0.7 (8) | N1—C5—C6—C7 | 19.1 (2) |
S1A—C1A—C2A—C3A | −0.8 (14) | C4—C5—C6—C7 | −98.4 (2) |
C3B—C4—C3A—C2A | −1.1 (19) | N1—N2—C7—C8 | 179.6 (2) |
C5—C4—C3A—C2A | 177.7 (7) | N1—N2—C7—C6 | 2.6 (3) |
S1B—C4—C3A—C2A | 165 (11) | C5—C6—C7—N2 | −14.8 (3) |
S1A—C4—C3A—C2A | 0.0 (12) | C5—C6—C7—C8 | 168.2 (2) |
C1A—C2A—C3A—C4 | 0.5 (16) | C10—C9—C8—C13 | −0.6 (4) |
C3A—C4—S1B—C1B | −17 (10) | C10—C9—C8—C7 | 179.3 (2) |
C3B—C4—S1B—C1B | −3 (3) | N2—C7—C8—C9 | −170.3 (2) |
C5—C4—S1B—C1B | 174 (3) | C6—C7—C8—C9 | 6.4 (4) |
S1A—C4—S1B—C1B | −2 (3) | N2—C7—C8—C13 | 9.6 (4) |
C4—S1B—C1B—C2B | 3 (6) | C6—C7—C8—C13 | −173.7 (2) |
S1B—C1B—C2B—C3B | −3 (8) | C8—C9—C10—C11 | 0.8 (4) |
C3A—C4—C3B—C2B | 4 (4) | C9—C10—C11—C12 | −0.3 (4) |
C5—C4—C3B—C2B | −175 (3) | C9—C10—C11—Cl1 | 179.84 (19) |
S1B—C4—C3B—C2B | 2 (4) | C10—C11—C12—C13 | −0.4 (4) |
S1A—C4—C3B—C2B | −168 (16) | Cl1—C11—C12—C13 | 179.5 (2) |
C1B—C2B—C3B—C4 | 0 (7) | C11—C12—C13—C8 | 0.5 (4) |
C14—N1—C5—C4 | −86.0 (3) | C9—C8—C13—C12 | −0.1 (4) |
N2—N1—C5—C4 | 98.9 (2) | C7—C8—C13—C12 | −179.9 (2) |
C14—N1—C5—C6 | 154.9 (2) | N2—N1—C14—N3 | −3.3 (4) |
N2—N1—C5—C6 | −20.1 (3) | C5—N1—C14—N3 | −178.0 (2) |
C3A—C4—C5—N1 | −90.9 (8) | N2—N1—C14—S2 | 175.10 (17) |
C3B—C4—C5—N1 | 87.6 (19) | C5—N1—C14—S2 | 0.4 (3) |
Cg1 and Cg2 are the centroids of the S1A/C1A–C3A/C4 and S1B/C1B–C3B/C4 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1N3···N2 | 0.90 (4) | 2.28 (4) | 2.656 (3) | 105 (3) |
N3—H2N3···S2i | 0.89 (4) | 2.52 (4) | 3.400 (3) | 170 (3) |
C5—H5A···S1Aii | 1.00 | 2.86 | 3.664 (3) | 138 |
C9—H9A···Cg1iii | 0.95 | 2.79 | 3.628 (4) | 148 |
C9—H9A···Cg2iii | 0.95 | 2.77 | 3.595 (18) | 145 |
Symmetry codes: (i) −x+2, −y+2, −z+1; (ii) −x+1, −y+2, −z+2; (iii) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C14H12ClN3S2 |
Mr | 321.86 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 100 |
a, b, c (Å) | 6.7784 (3), 25.2104 (11), 8.4628 (4) |
β (°) | 90.339 (2) |
V (Å3) | 1446.15 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.55 |
Crystal size (mm) | 0.56 × 0.09 × 0.08 |
Data collection | |
Diffractometer | Bruker APEX DUO CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.749, 0.958 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 32828, 4206, 3801 |
Rint | 0.047 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.138, 1.10 |
No. of reflections | 4206 |
No. of parameters | 211 |
No. of restraints | 10 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.33, −0.59 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg1 and Cg2 are the centroids of the S1A/C1A–C3A/C4 and S1B/C1B–C3B/C4 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1N3···N2 | 0.90 (4) | 2.28 (4) | 2.656 (3) | 105 (3) |
N3—H2N3···S2i | 0.89 (4) | 2.52 (4) | 3.400 (3) | 170 (3) |
C5—H5A···S1Aii | 1.00 | 2.86 | 3.664 (3) | 138 |
C9—H9A···Cg1iii | 0.95 | 2.79 | 3.628 (4) | 148 |
C9—H9A···Cg2iii | 0.95 | 2.77 | 3.595 (18) | 145 |
Symmetry codes: (i) −x+2, −y+2, −z+1; (ii) −x+1, −y+2, −z+2; (iii) x−1, y, z. |
Acknowledgements
The authors thank the Prince of Songkla University for financial support. The authors also thank the Thailand Research Fund (TRF) for a research grant (RSA5280033) and Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The synthesis of pyrazoline derivatives which contain 5-membered heterocyclic structure have attracted a lot of interests in many fields, for example as in medicinal chemistry owing to their biological properties such as antiamoebic (Husain et al., 2008), anti-inflammatory (Shoman et al., 2009), analgesic (Khode et al., 2009) and antioxidant (Taj et al., 2011) activities, as well as in fluorescence (Bai et al., 2007; Gong et al., 2011) studies. Our on-going research on biological activities and fluorescent property of pyrazoline derivatives has led us to synthesize the title compound (I) in order to compare its biological activity with the related compounds (Fun et al., 2011; Nonthason et al., 2011).
In the molecule of (I), C14H12ClN3S2, the thiophene ring is disordered over two positions with the refined site-occupancy ratio of 0.832 (4):0.168 (4). The dihedral angles between the benzene and the major and minor components of the thiophene rings are 88.6 (3) and 85.6 (15)° respectively. The pyrazoline ring is in an envelope conformation [pucker atom at C5 with deviation of -0.125 (3) Å] with puckering parameter Q = 0.206 (3) Å and ϕ = 137.6 (7)° (Cremer & Pople, 1975). The dihedral angle between the mean plane through pyrazoline ring and the benzene ring is 11.86 (13)°, whereas these values are 80.1 (3) and 83.0 (15)° between the pyrazoline and the major and minor components of the thiophene ring. The carbothioamide unit lies almost on the same plane with pyrazoline ring as can be indicated by the torsion angles N2–N1–C14–N3 = -3.3 (4)° and C5–N1–C14–S2 = 0.4 (3)°. Intramolecular N3—H1N3···N2 hydrogen bond generate an S(5) ring motif (Bernstein et al., 1995). Bond distances of (I) are in normal range (Allen et al., 1987)
In the crystal packing, (Fig. 2), the molecules are linked by weak C5—H5A···S1A intermolecular interactions (Table 1) into cyclic centrosymmetric R22(8) dimers (Bernstein et al., 1995). These dimers are further linked by N3—H2N3···S2 hydrogen bonds (Table 1) into a tape along the [101] direction (Fig. 2). The crystal is stabilized by N—H···S hydrogen bonds together with weak C—H···S and C—H···π interactions (Table 1).