organic compounds
1,3-Bis[2-hydroxy-2-(6-methoxy-2,2-dimethyl-3a,5,6,6a-tetrahydro-2H-furo[2,3-d][1,3]dioxol-5-yl)ethyl]-2,3-dihydro-1H-1,3-benzodiazol-2-one
aLaboratoire de Chimie des Agroressources, Université Ibn Tofail, Kénitra, Morocco, bLaboratoire de Chimie Organique Hétérocyclique, Pôle de Compétences Pharmacochimie, Université Mohammed V-Agdal, BP 1014 Avenue Ibn Batout, Rabat, Morocco, cDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia, and dChemistry Department, King Abdulaziz University, PO Box 80203 Jeddah, Saudi Arabia
*Correspondence e-mail: seikweng@um.edu.my
In the title benzimidazolone, C27H38N2O11, which has N-bound glycosidic units, all five-membered O-heterocyclic rings adopt envelope conformations [for the outer rings, the C atom with the dimethyl groups represents the flap atom]. The two glycosidic units are related by a non-crystallographic twofold rotation axis that passes through the carbonyl portion. In the molecular structure, the hydroxy groups are hydrogen-bond donors to the carbonyl O atom. Weak intermolecular C—H⋯O hydrogen bonding is present in the crystal structure.
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: APEX2 (Bruker, 2010); cell SAINT (Bruker, 2010); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S160053681105625X/xu5430sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681105625X/xu5430Isup2.hkl
Supporting information file. DOI: 10.1107/S160053681105625X/xu5430Isup3.cml
To benzimidazol-2(3H)-one (0.50 g, 3.73 mmol) and potassium carbonate (1.13 g, 8.23 mmol) in a mixture of toluene-DMSO (4:1, v/v) was added 5,6-anhydro-1,2-O-isopropylidene-α-D-glucofuranose (1.61 g, 7.46 mmol). Stirring was continued for 24 h at 383 K. The reaction was monitored by thin layer The solid material was removed by filtration and the filtrate was concentrated under reduced pressure. The residue was extracted with toluene-water; the organic layer was removed, washed with saturated aqueous sodium chloride and then dried over sodium sulfate. The crude product obtained was purified by silica gel by using acetone/hexane (1/4). The was allowed to evaporate to afford the title compound as colorless crystals.
Hydrogen atoms were placed in calculated positions (C–H 0.93–0.97 and O–H 0.82 Å) and were included in the
in the riding model approximation, with U(H) set to 1.2–1.5U(C,O).The
was those of the reactant; 3092 Friedel pairs were merged. The (2 0 0), (-2 0 1), (2 0 1) and (0 0 1) reflections were omitted owing to bad disagreement.Data collection: APEX2 (Bruker, 2010); cell
SAINT (Bruker, 2010); data reduction: SAINT (Bruker, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Thermal ellipsoid plot (Barbour, 2001) of C27H38N2O11 at the 30% probability level; hydrogen atoms are drawn as spheres of arbitrary radius. |
C27H38N2O11 | F(000) = 1208 |
Mr = 566.59 | Dx = 1.310 Mg m−3 |
Monoclinic, C2 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C 2y | Cell parameters from 8431 reflections |
a = 30.5551 (8) Å | θ = 2.3–22.4° |
b = 5.3132 (1) Å | µ = 0.10 mm−1 |
c = 17.8757 (5) Å | T = 296 K |
β = 98.267 (2)° | Prism, colorless |
V = 2871.88 (12) Å3 | 0.42 × 0.17 × 0.12 mm |
Z = 4 |
Bruker APEX DUO diffractometer | 2734 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.034 |
Graphite monochromator | θmax = 28.1°, θmin = 2.3° |
ω scans | h = −40→40 |
30976 measured reflections | k = −7→7 |
3861 independent reflections | l = −23→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.134 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0702P)2 + 0.7057P] where P = (Fo2 + 2Fc2)/3 |
3861 reflections | (Δ/σ)max = 0.001 |
363 parameters | Δρmax = 0.17 e Å−3 |
1 restraint | Δρmin = −0.16 e Å−3 |
C27H38N2O11 | V = 2871.88 (12) Å3 |
Mr = 566.59 | Z = 4 |
Monoclinic, C2 | Mo Kα radiation |
a = 30.5551 (8) Å | µ = 0.10 mm−1 |
b = 5.3132 (1) Å | T = 296 K |
c = 17.8757 (5) Å | 0.42 × 0.17 × 0.12 mm |
β = 98.267 (2)° |
Bruker APEX DUO diffractometer | 2734 reflections with I > 2σ(I) |
30976 measured reflections | Rint = 0.034 |
3861 independent reflections |
R[F2 > 2σ(F2)] = 0.044 | 1 restraint |
wR(F2) = 0.134 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.17 e Å−3 |
3861 reflections | Δρmin = −0.16 e Å−3 |
363 parameters |
x | y | z | Uiso*/Ueq | ||
O1 | 0.45026 (6) | 0.5033 (5) | 0.33539 (12) | 0.0766 (6) | |
O2 | 0.37502 (7) | 0.7202 (4) | 0.23328 (12) | 0.0767 (6) | |
O3 | 0.37553 (11) | 0.6090 (5) | 0.10928 (13) | 0.0998 (9) | |
O4 | 0.41260 (7) | 0.2587 (4) | 0.14954 (10) | 0.0654 (5) | |
O5 | 0.36385 (8) | 0.3556 (9) | 0.39848 (13) | 0.1219 (14) | |
H5 | 0.3436 | 0.3546 | 0.4241 | 0.183* | |
O6 | 0.27339 (8) | 0.3692 (13) | 0.44238 (12) | 0.174 (3) | |
O7 | 0.17794 (8) | 0.3550 (10) | 0.45163 (15) | 0.1362 (17) | |
H7 | 0.2032 | 0.3342 | 0.4733 | 0.204* | |
O8 | 0.11563 (7) | 0.0500 (5) | 0.29169 (12) | 0.0794 (6) | |
O9 | 0.06657 (10) | 0.1535 (4) | 0.18397 (12) | 0.0876 (8) | |
O10 | 0.05679 (8) | 0.5151 (4) | 0.24633 (11) | 0.0710 (6) | |
O11 | 0.07896 (7) | 0.2187 (6) | 0.42890 (11) | 0.0880 (8) | |
N1 | 0.27933 (7) | 0.5088 (8) | 0.32190 (13) | 0.0886 (10) | |
N2 | 0.23072 (8) | 0.2129 (9) | 0.33524 (13) | 0.0946 (12) | |
C1 | 0.47984 (12) | 0.3388 (10) | 0.3764 (2) | 0.1010 (13) | |
H1A | 0.5000 | 0.4321 | 0.4123 | 0.152* | |
H1B | 0.4961 | 0.2501 | 0.3426 | 0.152* | |
H1C | 0.4639 | 0.2204 | 0.4028 | 0.152* | |
C2 | 0.41922 (8) | 0.3811 (6) | 0.28051 (14) | 0.0604 (6) | |
H2 | 0.4188 | 0.1989 | 0.2889 | 0.072* | |
C3 | 0.42988 (9) | 0.4441 (5) | 0.20226 (15) | 0.0579 (6) | |
H3 | 0.4615 | 0.4741 | 0.2019 | 0.070* | |
C4 | 0.39090 (12) | 0.3801 (6) | 0.08371 (16) | 0.0733 (8) | |
C5 | 0.42325 (15) | 0.4237 (11) | 0.02859 (19) | 0.1074 (13) | |
H5A | 0.4474 | 0.5248 | 0.0522 | 0.161* | |
H5B | 0.4086 | 0.5092 | −0.0153 | 0.161* | |
H5C | 0.4343 | 0.2649 | 0.0139 | 0.161* | |
C6 | 0.35169 (13) | 0.2237 (9) | 0.0517 (2) | 0.1029 (13) | |
H6A | 0.3324 | 0.2036 | 0.0892 | 0.154* | |
H6B | 0.3616 | 0.0615 | 0.0375 | 0.154* | |
H6C | 0.3361 | 0.3062 | 0.0081 | 0.154* | |
C7 | 0.40167 (11) | 0.6756 (6) | 0.17787 (17) | 0.0686 (8) | |
H7A | 0.4203 | 0.8220 | 0.1712 | 0.082* | |
C8 | 0.37374 (9) | 0.4957 (7) | 0.27796 (15) | 0.0659 (7) | |
H8 | 0.3515 | 0.3799 | 0.2523 | 0.079* | |
C9 | 0.36052 (10) | 0.5741 (10) | 0.35228 (17) | 0.0879 (12) | |
H9 | 0.3818 | 0.6990 | 0.3756 | 0.105* | |
C10 | 0.31454 (10) | 0.6894 (11) | 0.3438 (2) | 0.1013 (15) | |
H10A | 0.3102 | 0.7661 | 0.3914 | 0.122* | |
H10B | 0.3127 | 0.8215 | 0.3060 | 0.122* | |
C11 | 0.25900 (8) | 0.4453 (8) | 0.24966 (15) | 0.0717 (9) | |
C12 | 0.26519 (10) | 0.5351 (10) | 0.17970 (17) | 0.0886 (12) | |
H12 | 0.2857 | 0.6606 | 0.1742 | 0.106* | |
C13 | 0.23948 (11) | 0.4296 (13) | 0.11848 (18) | 0.1071 (17) | |
H13 | 0.2425 | 0.4866 | 0.0703 | 0.128* | |
C14 | 0.20961 (12) | 0.2436 (13) | 0.12611 (19) | 0.1110 (18) | |
H14 | 0.1932 | 0.1759 | 0.0830 | 0.133* | |
C15 | 0.20314 (10) | 0.1534 (10) | 0.19590 (19) | 0.0950 (13) | |
H15 | 0.1826 | 0.0275 | 0.2010 | 0.114* | |
C16 | 0.22854 (9) | 0.2586 (9) | 0.25767 (15) | 0.0759 (10) | |
C17 | 0.26215 (10) | 0.3639 (13) | 0.37379 (17) | 0.1112 (19) | |
C18 | 0.20542 (11) | 0.0311 (13) | 0.3720 (2) | 0.1167 (18) | |
H18A | 0.2247 | −0.0478 | 0.4132 | 0.140* | |
H18B | 0.1947 | −0.0992 | 0.3360 | 0.140* | |
C19 | 0.16587 (10) | 0.1509 (11) | 0.40316 (19) | 0.1004 (15) | |
H19 | 0.1520 | 0.0222 | 0.4312 | 0.120* | |
C20 | 0.13151 (8) | 0.2522 (7) | 0.34121 (15) | 0.0691 (8) | |
H20 | 0.1451 | 0.3805 | 0.3125 | 0.083* | |
C21 | 0.07154 (9) | 0.0921 (5) | 0.26029 (16) | 0.0603 (7) | |
H21 | 0.0534 | −0.0549 | 0.2683 | 0.072* | |
C22 | 0.06186 (10) | 0.4169 (5) | 0.17386 (16) | 0.0605 (7) | |
C23 | 0.10223 (10) | 0.5292 (8) | 0.14949 (18) | 0.0817 (9) | |
H23A | 0.1275 | 0.4909 | 0.1862 | 0.123* | |
H23B | 0.0987 | 0.7084 | 0.1452 | 0.123* | |
H23C | 0.1065 | 0.4606 | 0.1014 | 0.123* | |
C24 | 0.02076 (11) | 0.4703 (10) | 0.1193 (2) | 0.0961 (12) | |
H24A | −0.0043 | 0.3961 | 0.1377 | 0.144* | |
H24B | 0.0238 | 0.4000 | 0.0708 | 0.144* | |
H24C | 0.0166 | 0.6489 | 0.1145 | 0.144* | |
C25 | 0.05565 (8) | 0.3204 (5) | 0.29936 (14) | 0.0545 (6) | |
H25 | 0.0260 | 0.2961 | 0.3132 | 0.065* | |
C26 | 0.09055 (9) | 0.3618 (6) | 0.36827 (14) | 0.0633 (7) | |
H26 | 0.0942 | 0.5405 | 0.3812 | 0.076* | |
C27 | 0.06435 (14) | 0.3616 (13) | 0.48528 (18) | 0.1196 (19) | |
H27A | 0.0569 | 0.2525 | 0.5244 | 0.179* | |
H27B | 0.0387 | 0.4561 | 0.4644 | 0.179* | |
H27C | 0.0873 | 0.4752 | 0.5062 | 0.179* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0660 (11) | 0.0826 (16) | 0.0778 (12) | −0.0040 (12) | −0.0015 (9) | −0.0167 (13) |
O2 | 0.0851 (13) | 0.0624 (13) | 0.0865 (13) | 0.0135 (11) | 0.0260 (11) | −0.0062 (11) |
O3 | 0.161 (2) | 0.0603 (14) | 0.0740 (14) | 0.0439 (16) | 0.0026 (15) | 0.0019 (12) |
O4 | 0.0904 (13) | 0.0398 (10) | 0.0644 (11) | 0.0097 (10) | 0.0062 (9) | −0.0033 (9) |
O5 | 0.0779 (14) | 0.226 (4) | 0.0636 (13) | 0.002 (2) | 0.0151 (11) | 0.017 (2) |
O6 | 0.0872 (15) | 0.380 (8) | 0.0505 (11) | −0.064 (3) | −0.0020 (10) | 0.015 (3) |
O7 | 0.0725 (14) | 0.258 (5) | 0.0744 (14) | −0.031 (2) | −0.0014 (11) | −0.008 (3) |
O8 | 0.0669 (12) | 0.0758 (15) | 0.0943 (15) | 0.0146 (11) | 0.0079 (10) | −0.0080 (13) |
O9 | 0.151 (2) | 0.0438 (12) | 0.0662 (13) | 0.0104 (14) | 0.0109 (13) | −0.0066 (10) |
O10 | 0.1105 (16) | 0.0384 (10) | 0.0670 (11) | 0.0061 (11) | 0.0227 (11) | 0.0008 (9) |
O11 | 0.0892 (13) | 0.113 (2) | 0.0667 (12) | −0.0176 (15) | 0.0283 (11) | 0.0105 (14) |
N1 | 0.0554 (12) | 0.155 (3) | 0.0552 (13) | −0.0049 (18) | 0.0080 (10) | −0.0127 (19) |
N2 | 0.0527 (12) | 0.166 (4) | 0.0640 (14) | 0.0023 (19) | 0.0037 (11) | 0.018 (2) |
C1 | 0.079 (2) | 0.126 (4) | 0.091 (2) | −0.011 (2) | −0.0100 (17) | 0.020 (3) |
C2 | 0.0650 (14) | 0.0552 (16) | 0.0605 (14) | −0.0068 (13) | 0.0073 (11) | −0.0038 (13) |
C3 | 0.0695 (15) | 0.0435 (14) | 0.0632 (15) | −0.0036 (12) | 0.0179 (12) | −0.0056 (12) |
C4 | 0.109 (2) | 0.0485 (16) | 0.0623 (16) | 0.0191 (17) | 0.0128 (16) | 0.0015 (14) |
C5 | 0.144 (3) | 0.113 (3) | 0.0684 (19) | −0.011 (3) | 0.028 (2) | 0.000 (2) |
C6 | 0.108 (3) | 0.093 (3) | 0.099 (2) | 0.008 (3) | −0.016 (2) | −0.001 (2) |
C7 | 0.095 (2) | 0.0382 (14) | 0.0783 (18) | 0.0023 (14) | 0.0306 (16) | −0.0018 (13) |
C8 | 0.0619 (14) | 0.078 (2) | 0.0587 (15) | −0.0090 (15) | 0.0121 (11) | −0.0092 (15) |
C9 | 0.0644 (16) | 0.137 (4) | 0.0619 (17) | −0.011 (2) | 0.0087 (14) | −0.027 (2) |
C10 | 0.0701 (18) | 0.158 (4) | 0.079 (2) | −0.004 (2) | 0.0204 (16) | −0.047 (3) |
C11 | 0.0517 (13) | 0.111 (3) | 0.0517 (14) | 0.0174 (17) | 0.0039 (11) | −0.0067 (16) |
C12 | 0.0699 (17) | 0.131 (4) | 0.0655 (17) | 0.020 (2) | 0.0112 (14) | 0.006 (2) |
C13 | 0.0747 (19) | 0.190 (5) | 0.0553 (16) | 0.020 (3) | 0.0050 (15) | 0.004 (3) |
C14 | 0.0730 (19) | 0.190 (5) | 0.0662 (19) | 0.016 (3) | −0.0017 (16) | −0.041 (3) |
C15 | 0.0607 (16) | 0.138 (4) | 0.085 (2) | 0.015 (2) | 0.0037 (15) | −0.026 (3) |
C16 | 0.0495 (13) | 0.116 (3) | 0.0612 (15) | 0.0206 (17) | 0.0051 (11) | −0.0022 (18) |
C17 | 0.0542 (15) | 0.222 (6) | 0.0568 (16) | −0.004 (3) | 0.0049 (13) | 0.004 (3) |
C18 | 0.0664 (18) | 0.176 (5) | 0.108 (3) | 0.025 (3) | 0.0119 (18) | 0.061 (3) |
C19 | 0.0643 (17) | 0.161 (5) | 0.076 (2) | −0.003 (2) | 0.0099 (16) | 0.036 (3) |
C20 | 0.0533 (13) | 0.094 (2) | 0.0590 (14) | −0.0128 (16) | 0.0066 (11) | 0.0080 (16) |
C21 | 0.0638 (15) | 0.0421 (14) | 0.0735 (17) | −0.0030 (12) | 0.0042 (13) | 0.0028 (13) |
C22 | 0.0768 (16) | 0.0463 (15) | 0.0579 (14) | 0.0066 (13) | 0.0084 (12) | −0.0020 (12) |
C23 | 0.0849 (19) | 0.085 (2) | 0.0790 (19) | 0.0100 (19) | 0.0228 (16) | 0.0095 (19) |
C24 | 0.084 (2) | 0.107 (3) | 0.092 (2) | 0.002 (2) | −0.0052 (17) | 0.009 (2) |
C25 | 0.0579 (13) | 0.0434 (14) | 0.0628 (14) | −0.0035 (11) | 0.0108 (11) | 0.0028 (11) |
C26 | 0.0664 (14) | 0.0660 (18) | 0.0590 (14) | −0.0146 (14) | 0.0148 (11) | −0.0018 (14) |
C27 | 0.117 (3) | 0.187 (6) | 0.0603 (18) | 0.040 (4) | 0.0316 (19) | 0.019 (3) |
O1—C1 | 1.389 (5) | C6—H6C | 0.9600 |
O1—C2 | 1.420 (3) | C7—H7A | 0.9800 |
O2—C7 | 1.390 (4) | C8—C9 | 1.502 (4) |
O2—C8 | 1.439 (4) | C8—H8 | 0.9800 |
O3—C4 | 1.404 (4) | C9—C10 | 1.520 (5) |
O3—C7 | 1.409 (4) | C9—H9 | 0.9800 |
O4—C3 | 1.412 (3) | C10—H10A | 0.9700 |
O4—C4 | 1.420 (3) | C10—H10B | 0.9700 |
O5—C9 | 1.420 (6) | C11—C12 | 1.377 (4) |
O5—H5 | 0.8200 | C11—C16 | 1.381 (5) |
O6—C17 | 1.225 (3) | C12—C13 | 1.372 (5) |
O7—C19 | 1.404 (7) | C12—H12 | 0.9300 |
O7—H7 | 0.8200 | C13—C14 | 1.365 (8) |
O8—C21 | 1.401 (3) | C13—H13 | 0.9300 |
O8—C20 | 1.432 (4) | C14—C15 | 1.377 (6) |
O9—C21 | 1.389 (4) | C14—H14 | 0.9300 |
O9—C22 | 1.416 (4) | C15—C16 | 1.374 (5) |
O10—C25 | 1.407 (3) | C15—H15 | 0.9300 |
O10—C22 | 1.426 (3) | C18—C19 | 1.539 (6) |
O11—C27 | 1.386 (5) | C18—H18A | 0.9700 |
O11—C26 | 1.410 (3) | C18—H18B | 0.9700 |
N1—C17 | 1.367 (6) | C19—C20 | 1.511 (4) |
N1—C11 | 1.392 (3) | C19—H19 | 0.9800 |
N1—C10 | 1.452 (5) | C20—C26 | 1.521 (4) |
N2—C17 | 1.360 (6) | C20—H20 | 0.9800 |
N2—C16 | 1.400 (4) | C21—C25 | 1.514 (4) |
N2—C18 | 1.452 (6) | C21—H21 | 0.9800 |
C1—H1A | 0.9600 | C22—C23 | 1.491 (5) |
C1—H1B | 0.9600 | C22—C24 | 1.502 (4) |
C1—H1C | 0.9600 | C23—H23A | 0.9600 |
C2—C8 | 1.512 (4) | C23—H23B | 0.9600 |
C2—C3 | 1.518 (4) | C23—H23C | 0.9600 |
C2—H2 | 0.9800 | C24—H24A | 0.9600 |
C3—C7 | 1.529 (4) | C24—H24B | 0.9600 |
C3—H3 | 0.9800 | C24—H24C | 0.9600 |
C4—C6 | 1.502 (5) | C25—C26 | 1.525 (4) |
C4—C5 | 1.511 (5) | C25—H25 | 0.9800 |
C5—H5A | 0.9600 | C26—H26 | 0.9800 |
C5—H5B | 0.9600 | C27—H27A | 0.9600 |
C5—H5C | 0.9600 | C27—H27B | 0.9600 |
C6—H6A | 0.9600 | C27—H27C | 0.9600 |
C6—H6B | 0.9600 | ||
C1—O1—C2 | 113.3 (3) | C13—C12—C11 | 116.5 (4) |
C7—O2—C8 | 108.6 (2) | C13—C12—H12 | 121.8 |
C4—O3—C7 | 109.1 (3) | C11—C12—H12 | 121.8 |
C3—O4—C4 | 108.8 (2) | C12—C13—C14 | 122.0 (4) |
C9—O5—H5 | 109.5 | C12—C13—H13 | 119.0 |
C19—O7—H7 | 109.5 | C14—C13—H13 | 119.0 |
C21—O8—C20 | 110.4 (2) | C15—C14—C13 | 121.8 (4) |
C21—O9—C22 | 110.6 (2) | C15—C14—H14 | 119.1 |
C25—O10—C22 | 111.0 (2) | C13—C14—H14 | 119.1 |
C27—O11—C26 | 114.0 (4) | C14—C15—C16 | 116.6 (4) |
C17—N1—C11 | 109.2 (3) | C14—C15—H15 | 121.7 |
C17—N1—C10 | 122.1 (3) | C16—C15—H15 | 121.7 |
C11—N1—C10 | 128.6 (3) | C15—C16—C11 | 121.3 (3) |
C17—N2—C16 | 109.2 (3) | C15—C16—N2 | 131.8 (4) |
C17—N2—C18 | 123.1 (3) | C11—C16—N2 | 106.9 (3) |
C16—N2—C18 | 127.7 (4) | O6—C17—N2 | 126.6 (5) |
O1—C1—H1A | 109.5 | O6—C17—N1 | 125.9 (5) |
O1—C1—H1B | 109.5 | N2—C17—N1 | 107.5 (3) |
H1A—C1—H1B | 109.5 | N2—C18—C19 | 112.7 (5) |
O1—C1—H1C | 109.5 | N2—C18—H18A | 109.1 |
H1A—C1—H1C | 109.5 | C19—C18—H18A | 109.1 |
H1B—C1—H1C | 109.5 | N2—C18—H18B | 109.1 |
O1—C2—C8 | 110.9 (2) | C19—C18—H18B | 109.1 |
O1—C2—C3 | 109.0 (2) | H18A—C18—H18B | 107.8 |
C8—C2—C3 | 101.6 (2) | O7—C19—C20 | 105.7 (4) |
O1—C2—H2 | 111.6 | O7—C19—C18 | 113.1 (3) |
C8—C2—H2 | 111.6 | C20—C19—C18 | 112.4 (3) |
C3—C2—H2 | 111.6 | O7—C19—H19 | 108.5 |
O4—C3—C2 | 110.6 (2) | C20—C19—H19 | 108.5 |
O4—C3—C7 | 103.3 (2) | C18—C19—H19 | 108.5 |
C2—C3—C7 | 104.7 (2) | O8—C20—C19 | 108.9 (3) |
O4—C3—H3 | 112.6 | O8—C20—C26 | 105.2 (2) |
C2—C3—H3 | 112.6 | C19—C20—C26 | 114.8 (2) |
C7—C3—H3 | 112.6 | O8—C20—H20 | 109.2 |
O3—C4—O4 | 105.2 (2) | C19—C20—H20 | 109.2 |
O3—C4—C6 | 108.5 (3) | C26—C20—H20 | 109.2 |
O4—C4—C6 | 108.4 (3) | O9—C21—O8 | 113.2 (3) |
O3—C4—C5 | 111.1 (3) | O9—C21—C25 | 105.5 (2) |
O4—C4—C5 | 109.8 (3) | O8—C21—C25 | 107.3 (2) |
C6—C4—C5 | 113.4 (3) | O9—C21—H21 | 110.2 |
C4—C5—H5A | 109.5 | O8—C21—H21 | 110.2 |
C4—C5—H5B | 109.5 | C25—C21—H21 | 110.2 |
H5A—C5—H5B | 109.5 | O9—C22—O10 | 105.6 (2) |
C4—C5—H5C | 109.5 | O9—C22—C23 | 111.1 (3) |
H5A—C5—H5C | 109.5 | O10—C22—C23 | 108.8 (2) |
H5B—C5—H5C | 109.5 | O9—C22—C24 | 109.3 (3) |
C4—C6—H6A | 109.5 | O10—C22—C24 | 109.3 (3) |
C4—C6—H6B | 109.5 | C23—C22—C24 | 112.6 (3) |
H6A—C6—H6B | 109.5 | C22—C23—H23A | 109.5 |
C4—C6—H6C | 109.5 | C22—C23—H23B | 109.5 |
H6A—C6—H6C | 109.5 | H23A—C23—H23B | 109.5 |
H6B—C6—H6C | 109.5 | C22—C23—H23C | 109.5 |
O2—C7—O3 | 110.2 (3) | H23A—C23—H23C | 109.5 |
O2—C7—C3 | 107.3 (2) | H23B—C23—H23C | 109.5 |
O3—C7—C3 | 105.8 (2) | C22—C24—H24A | 109.5 |
O2—C7—H7A | 111.1 | C22—C24—H24B | 109.5 |
O3—C7—H7A | 111.1 | H24A—C24—H24B | 109.5 |
C3—C7—H7A | 111.1 | C22—C24—H24C | 109.5 |
O2—C8—C9 | 107.0 (3) | H24A—C24—H24C | 109.5 |
O2—C8—C2 | 104.6 (2) | H24B—C24—H24C | 109.5 |
C9—C8—C2 | 116.6 (2) | O10—C25—C21 | 103.75 (19) |
O2—C8—H8 | 109.4 | O10—C25—C26 | 110.9 (2) |
C9—C8—H8 | 109.4 | C21—C25—C26 | 104.8 (2) |
C2—C8—H8 | 109.4 | O10—C25—H25 | 112.3 |
O5—C9—C8 | 106.4 (4) | C21—C25—H25 | 112.3 |
O5—C9—C10 | 112.1 (3) | C26—C25—H25 | 112.3 |
C8—C9—C10 | 112.7 (3) | O11—C26—C20 | 110.3 (3) |
O5—C9—H9 | 108.5 | O11—C26—C25 | 108.6 (2) |
C8—C9—H9 | 108.5 | C20—C26—C25 | 101.5 (2) |
C10—C9—H9 | 108.5 | O11—C26—H26 | 112.0 |
N1—C10—C9 | 113.5 (4) | C20—C26—H26 | 112.0 |
N1—C10—H10A | 108.9 | C25—C26—H26 | 112.0 |
C9—C10—H10A | 108.9 | O11—C27—H27A | 109.5 |
N1—C10—H10B | 108.9 | O11—C27—H27B | 109.5 |
C9—C10—H10B | 108.9 | H27A—C27—H27B | 109.5 |
H10A—C10—H10B | 107.7 | O11—C27—H27C | 109.5 |
C12—C11—C16 | 121.7 (3) | H27A—C27—H27C | 109.5 |
C12—C11—N1 | 131.1 (4) | H27B—C27—H27C | 109.5 |
C16—C11—N1 | 107.2 (3) | ||
C1—O1—C2—C8 | 139.7 (3) | N1—C11—C16—N2 | 0.4 (4) |
C1—O1—C2—C3 | −109.3 (3) | C17—N2—C16—C15 | 178.7 (4) |
C4—O4—C3—C2 | 133.8 (2) | C18—N2—C16—C15 | 0.5 (7) |
C4—O4—C3—C7 | 22.3 (3) | C17—N2—C16—C11 | −1.0 (4) |
O1—C2—C3—O4 | 156.9 (2) | C18—N2—C16—C11 | −179.3 (4) |
C8—C2—C3—O4 | −86.0 (3) | C16—N2—C17—O6 | −178.3 (6) |
O1—C2—C3—C7 | −92.5 (3) | C18—N2—C17—O6 | 0.0 (9) |
C8—C2—C3—C7 | 24.6 (3) | C16—N2—C17—N1 | 1.3 (5) |
C7—O3—C4—O4 | 24.3 (4) | C18—N2—C17—N1 | 179.6 (4) |
C7—O3—C4—C6 | 140.1 (3) | C11—N1—C17—O6 | 178.6 (6) |
C7—O3—C4—C5 | −94.5 (3) | C10—N1—C17—O6 | 0.8 (8) |
C3—O4—C4—O3 | −29.5 (3) | C11—N1—C17—N2 | −1.0 (5) |
C3—O4—C4—C6 | −145.4 (3) | C10—N1—C17—N2 | −178.8 (4) |
C3—O4—C4—C5 | 90.1 (3) | C17—N2—C18—C19 | 82.3 (5) |
C8—O2—C7—O3 | 96.9 (3) | C16—N2—C18—C19 | −99.7 (5) |
C8—O2—C7—C3 | −17.9 (3) | N2—C18—C19—O7 | −54.2 (4) |
C4—O3—C7—O2 | −126.3 (3) | N2—C18—C19—C20 | 65.3 (5) |
C4—O3—C7—C3 | −10.5 (3) | C21—O8—C20—C19 | 149.5 (2) |
O4—C3—C7—O2 | 110.5 (3) | C21—O8—C20—C26 | 25.9 (3) |
C2—C3—C7—O2 | −5.3 (3) | O7—C19—C20—O8 | −176.7 (2) |
O4—C3—C7—O3 | −7.2 (3) | C18—C19—C20—O8 | 59.5 (5) |
C2—C3—C7—O3 | −123.0 (3) | O7—C19—C20—C26 | −59.0 (4) |
C7—O2—C8—C9 | 158.6 (2) | C18—C19—C20—C26 | 177.2 (4) |
C7—O2—C8—C2 | 34.3 (3) | C22—O9—C21—O8 | −99.7 (3) |
O1—C2—C8—O2 | 80.2 (3) | C22—O9—C21—C25 | 17.3 (4) |
C3—C2—C8—O2 | −35.5 (3) | C20—O8—C21—O9 | 108.5 (3) |
O1—C2—C8—C9 | −37.8 (4) | C20—O8—C21—C25 | −7.5 (3) |
C3—C2—C8—C9 | −153.5 (3) | C21—O9—C22—O10 | −9.3 (4) |
O2—C8—C9—O5 | −174.1 (2) | C21—O9—C22—C23 | 108.4 (3) |
C2—C8—C9—O5 | −57.4 (4) | C21—O9—C22—C24 | −126.8 (3) |
O2—C8—C9—C10 | 62.8 (4) | C25—O10—C22—O9 | −3.4 (3) |
C2—C8—C9—C10 | 179.4 (4) | C25—O10—C22—C23 | −122.7 (3) |
C17—N1—C10—C9 | 85.0 (4) | C25—O10—C22—C24 | 114.0 (3) |
C11—N1—C10—C9 | −92.3 (5) | C22—O10—C25—C21 | 13.4 (3) |
O5—C9—C10—N1 | −50.1 (4) | C22—O10—C25—C26 | 125.3 (2) |
C8—C9—C10—N1 | 69.8 (5) | O9—C21—C25—O10 | −18.4 (3) |
C17—N1—C11—C12 | −179.2 (4) | O8—C21—C25—O10 | 102.5 (3) |
C10—N1—C11—C12 | −1.6 (7) | O9—C21—C25—C26 | −134.8 (2) |
C17—N1—C11—C16 | 0.4 (4) | O8—C21—C25—C26 | −13.8 (3) |
C10—N1—C11—C16 | 178.0 (4) | C27—O11—C26—C20 | 141.0 (3) |
C16—C11—C12—C13 | 0.1 (6) | C27—O11—C26—C25 | −108.6 (3) |
N1—C11—C12—C13 | 179.7 (4) | O8—C20—C26—O11 | 82.3 (3) |
C11—C12—C13—C14 | −0.7 (7) | C19—C20—C26—O11 | −37.4 (4) |
C12—C13—C14—C15 | 0.9 (8) | O8—C20—C26—C25 | −32.7 (3) |
C13—C14—C15—C16 | −0.5 (7) | C19—C20—C26—C25 | −152.4 (3) |
C14—C15—C16—C11 | −0.1 (6) | O10—C25—C26—O11 | 160.3 (2) |
C14—C15—C16—N2 | −179.8 (4) | C21—C25—C26—O11 | −88.4 (3) |
C12—C11—C16—C15 | 0.3 (5) | O10—C25—C26—C20 | −83.4 (3) |
N1—C11—C16—C15 | −179.4 (3) | C21—C25—C26—C20 | 27.9 (3) |
C12—C11—C16—N2 | −180.0 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5···O6 | 0.82 | 2.22 | 2.981 (3) | 155 |
O7—H7···O6 | 0.82 | 2.30 | 2.946 (3) | 136 |
C7—H7A···O4i | 0.98 | 2.36 | 3.165 (4) | 139 |
C21—H21···O10ii | 0.98 | 2.32 | 3.103 (3) | 136 |
Symmetry codes: (i) x, y+1, z; (ii) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C27H38N2O11 |
Mr | 566.59 |
Crystal system, space group | Monoclinic, C2 |
Temperature (K) | 296 |
a, b, c (Å) | 30.5551 (8), 5.3132 (1), 17.8757 (5) |
β (°) | 98.267 (2) |
V (Å3) | 2871.88 (12) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.42 × 0.17 × 0.12 |
Data collection | |
Diffractometer | Bruker APEX DUO diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 30976, 3861, 2734 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.663 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.134, 1.01 |
No. of reflections | 3861 |
No. of parameters | 363 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.17, −0.16 |
Computer programs: APEX2 (Bruker, 2010), SAINT (Bruker, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5···O6 | 0.82 | 2.22 | 2.981 (3) | 155 |
O7—H7···O6 | 0.82 | 2.30 | 2.946 (3) | 136 |
C7—H7A···O4i | 0.98 | 2.36 | 3.165 (4) | 139 |
C21—H21···O10ii | 0.98 | 2.32 | 3.103 (3) | 136 |
Symmetry codes: (i) x, y+1, z; (ii) x, y−1, z. |
Acknowledgements
We thank Université Mohammed V-Agdal and the University of Malaya for supporting this study.
References
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191. CrossRef CAS Google Scholar
Bruker (2010). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Lakhrissi, L., Hassan, N., Lakhrissi, B., Massoui, M., Essassi, E. M., Ruso, J. M., Solans, C. & Rodriguez-Abreu, C. (2011). J. Surfact. Deterg. 14, 487–495. Web of Science CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
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Benzimidazolones are heterocyclic compounds having pharmaceutical properties; benzimidazolones with glycosidic units showed surface-active properties (Lakhrissi et al., 2011). Following our interest in benzimidazolone-based pharmaceutical compounds, we have synthesized the title compound (Scheme I) by the reaction of benzimidazol-2(3H)-one and 5,6-anhydro-1,2-O-isopropylidene-α-D-glucofuranose in the presence of potassium carbonate. The title compound (Scheme I) has all five-membered rings adopting envelope conformations (Fig. 1). The two units are related by a non-crystallographic two-fold rotation axis that passes through the carbonyl portion; the hydroxyl groups are hydrogen-bond donors to the carbonyl O atom (Table 1).