metal-organic compounds
Tris(2,2′-bipyridine-κ2N,N′)cobalt(III) tris(oxalato-κ2O1,O2)ferrate(III) monohydrate
aDepartment of Inorganic Chemistry, Taras Shevchenko National University of Kyiv, 64 Volodymyrs'ka Street, Kyiv 01601, Ukraine, and bSTC `Institute for Single Crystals', National Academy of Sciences of Ukraine, 60 Lenina Avenue, Kharkiv 61001, Ukraine
*Correspondence e-mail: chigorin@mail.univ.kiev.ua
The title compound, [Co(C10H8N2)3][Fe(C2O4)3]·H2O, consists of two discrete tris(chelate) metal ions (CoIIIN6 and FeIIIO6 chromophores) and a water molecule. The structure is highly symmetrical; the CoIII and FeIII ions occupy positions with 3.2. The coordination polyhedra of the metal atoms have a nearly octahedral geometry with noticeable trigonal distortions. The Co—N and Fe—O bond lengths are equal by symmetry, viz. 1.981 (2) and 1.998 (4) Å, respectively. The cations and anions are arranged alternately along their threefold rotation axes parallel to [001], forming chains that are packed in a hexagonal manner. The water molecules occupy voids between the chains. The crystal under investigation was an inversion twin.
Related literature
For general background to direct synthesis, see: Makhankova (2011). For bond-valance sum calculation, see: Brown & Altermatt (1985) (http://www.iucr.org/resources/data/datasets/bond-valence-parameters ). For related structures, see: Chygorin et al. (2010); Coronado et al. (2000); Devi et al. (2003); Jun & Zhang (2010); Yanagi et al. (1981); Zhang et al. (2009). For measuring of trigonal distortion angles, see: Muetterties & Guggenberger (1974).
Experimental
Crystal data
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Data collection: CrysAlis CCD (Oxford Diffraction, 2009); cell CrysAlis RED (Oxford Diffraction, 2009); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL and PLATON (Spek, 2009); molecular graphics: SHELXTL; software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536812003224/br2188sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812003224/br2188Isup2.hkl
Cobalt powder (0.049 g, 0.83 mmol), (NH4)3[Fe(Ox)3].3H2O (0.355 g, 0.83 mmol), ethylenediamine dihydrochloride (0.221 g, 1.66 mmol), 2,2' – bipyridine (0.13 g, 0.83 mmol) and acetonitrile (15 ml) were heated to 323–333 K and stirred magnetically for 6 h resulting into a pale pink precepitate. After filtration the precepitate was recrystallized from hot water. Violet block crystals were obtained after two days. The compound is stable in air, it is sparingly soluble in water, methanol and dimethylsulfoxide.
All hydrogen atoms were located from difference Fourier map and refined within the riding model approximation with Uiso(H)= 1.5Ueq(C) for hydrogen atoms of the water molecule, and C—H = 0.93 (1)Å and Uiso(H)= 1.2Ueq(C) for aromatic hydrogen atoms.
value (Flack, 1983) of 0.57 (3) was obtained in the final calculation for enanthiopure chiral structure, that indicates presence of the both enanthiomers in the particular crystal examined. Futher full-matrix of the slightly improved the agreement index R (from 0.0676 to 0.0625). Content of the the major enanthiomer in the refined racemic twin structure is 57 (3)%. Several isolated electron density peaks were located during the which were believed to be a solvent molecule. Large displacement parameters were observed modeling the disordered oxygen atom. SQUEEZE procedure of PLATON (Spek, 2009) indicated a solvent cavity of volume 161 Å3 centered at (0,0,0), containing approximately 21 electron. In the final this contribution was removed from the intensity data that produced better results.Data collection: CrysAlis CCD (Oxford Diffraction, 2009); cell
CrysAlis RED (Oxford Diffraction, 2009); data reduction: CrysAlis RED (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: publCIF (Westrip, 2010).[Co(C10H8N2)3][Fe(C2O4)3]·H2O | Dx = 1.560 Mg m−3 |
Mr = 865.42 | Mo Kα radiation, λ = 0.71073 Å |
Hexagonal, P622 | Cell parameters from 1555 reflections |
Hall symbol: P 6 2 | θ = 3.1–32.0° |
a = 13.056 (2) Å | µ = 0.92 mm−1 |
c = 12.480 (3) Å | T = 293 K |
V = 1842.3 (7) Å3 | Block, violet |
Z = 2 | 0.60 × 0.40 × 0.20 mm |
F(000) = 882 |
Oxford Diffraction Xcalibur/Sapphire3 diffractometer | 1807 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1393 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.070 |
Detector resolution: 16.1827 pixels mm-1 | θmax = 30.0°, θmin = 3.1° |
ω scans | h = −18→18 |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009) | k = −18→17 |
Tmin = 0.608, Tmax = 0.838 | l = −17→17 |
17786 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.063 | H-atom parameters constrained |
wR(F2) = 0.155 | w = 1/[σ2(Fo2) + (0.0909P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
1807 reflections | Δρmax = 0.36 e Å−3 |
90 parameters | Δρmin = −0.83 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 699 Friedel pairs |
40 constraints | Absolute structure parameter: 0.57 (3) |
Primary atom site location: structure-invariant direct methods |
[Co(C10H8N2)3][Fe(C2O4)3]·H2O | Z = 2 |
Mr = 865.42 | Mo Kα radiation |
Hexagonal, P622 | µ = 0.92 mm−1 |
a = 13.056 (2) Å | T = 293 K |
c = 12.480 (3) Å | 0.60 × 0.40 × 0.20 mm |
V = 1842.3 (7) Å3 |
Oxford Diffraction Xcalibur/Sapphire3 diffractometer | 1807 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009) | 1393 reflections with I > 2σ(I) |
Tmin = 0.608, Tmax = 0.838 | Rint = 0.070 |
17786 measured reflections |
R[F2 > 2σ(F2)] = 0.063 | H-atom parameters constrained |
wR(F2) = 0.155 | Δρmax = 0.36 e Å−3 |
S = 1.04 | Δρmin = −0.83 e Å−3 |
1807 reflections | Absolute structure: Flack (1983), 699 Friedel pairs |
90 parameters | Absolute structure parameter: 0.57 (3) |
0 restraints |
Experimental. CrysAlis RED, Oxford Diffraction Ltd., 2009. Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Co1 | 0.3333 | 0.6667 | 0.5000 | 0.0271 (3) | |
Fe1 | 0.6667 | 0.3333 | 0.0000 | 0.0908 (6) | |
N1 | 0.4659 (2) | 0.6789 (2) | 0.41309 (19) | 0.0281 (5) | |
C1 | 0.5760 (2) | 0.7591 (2) | 0.4502 (2) | 0.0276 (6) | |
O1 | 0.6801 (4) | 0.4676 (4) | 0.0877 (3) | 0.1027 (14) | |
O2 | 0.7734 (6) | 0.6631 (5) | 0.0909 (4) | 0.1201 (18) | |
C2 | 0.6771 (3) | 0.7820 (3) | 0.3950 (3) | 0.0408 (8) | |
H2 | 0.7512 | 0.8352 | 0.4226 | 0.049* | |
C3 | 0.6678 (3) | 0.7257 (3) | 0.2986 (3) | 0.0459 (8) | |
H3 | 0.7352 | 0.7418 | 0.2600 | 0.055* | |
C4 | 0.5576 (3) | 0.6457 (3) | 0.2611 (3) | 0.0412 (8) | |
H4 | 0.5490 | 0.6067 | 0.1965 | 0.049* | |
C5 | 0.4604 (3) | 0.6239 (3) | 0.3201 (3) | 0.0376 (7) | |
H5 | 0.3863 | 0.5680 | 0.2946 | 0.045* | |
C6 | 0.7526 (6) | 0.5702 (7) | 0.0527 (4) | 0.0870 (17) | |
O1W | 1.0000 | 1.0000 | 0.4677 (4) | 0.0314 (14) | |
H1W | 0.9438 | 1.0000 | 0.5000 | 0.047* | 0.667 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.0289 (3) | 0.0289 (3) | 0.0235 (5) | 0.01447 (16) | 0.000 | 0.000 |
Fe1 | 0.1181 (10) | 0.1181 (10) | 0.0361 (8) | 0.0591 (5) | 0.000 | 0.000 |
N1 | 0.0325 (13) | 0.0270 (12) | 0.0280 (12) | 0.0171 (11) | −0.0004 (10) | −0.0020 (10) |
C1 | 0.0258 (12) | 0.0267 (13) | 0.0329 (16) | 0.0149 (10) | 0.0018 (12) | 0.0013 (11) |
O1 | 0.115 (3) | 0.129 (4) | 0.0414 (19) | 0.045 (3) | 0.028 (2) | 0.003 (2) |
O2 | 0.189 (5) | 0.152 (4) | 0.076 (3) | 0.127 (4) | 0.030 (3) | 0.002 (3) |
C2 | 0.0328 (16) | 0.0451 (18) | 0.0421 (19) | 0.0176 (15) | 0.0077 (15) | 0.0008 (15) |
C3 | 0.0467 (18) | 0.060 (2) | 0.043 (2) | 0.0359 (18) | 0.0151 (17) | 0.0067 (16) |
C4 | 0.0469 (18) | 0.045 (2) | 0.0368 (18) | 0.0272 (16) | 0.0051 (14) | −0.0044 (15) |
C5 | 0.0422 (17) | 0.0409 (17) | 0.0317 (17) | 0.0223 (14) | 0.0002 (13) | −0.0082 (13) |
C6 | 0.121 (5) | 0.125 (5) | 0.038 (3) | 0.079 (4) | 0.016 (3) | 0.001 (3) |
O1W | 0.0168 (10) | 0.0168 (10) | 0.060 (4) | 0.0084 (5) | 0.000 | 0.000 |
Co1—N1i | 1.981 (2) | C1—C2 | 1.383 (4) |
Co1—N1ii | 1.981 (2) | C1—C1iii | 1.454 (6) |
Co1—N1iii | 1.981 (2) | O1—C6 | 1.270 (7) |
Co1—N1iv | 1.981 (2) | O2—C6 | 1.201 (7) |
Co1—N1 | 1.981 (2) | C2—C3 | 1.384 (5) |
Co1—N1v | 1.981 (2) | C2—H2 | 0.9300 |
Fe1—O1vi | 1.998 (4) | C3—C4 | 1.370 (5) |
Fe1—O1vii | 1.998 (4) | C3—H3 | 0.9300 |
Fe1—O1viii | 1.998 (4) | C4—C5 | 1.368 (4) |
Fe1—O1ix | 1.998 (4) | C4—H4 | 0.9300 |
Fe1—O1x | 1.998 (4) | C5—H5 | 0.9300 |
Fe1—O1 | 1.998 (4) | C6—C6viii | 1.566 (9) |
N1—C5 | 1.348 (4) | O1W—O1Wxi | 0.807 (9) |
N1—C1 | 1.368 (4) | O1W—H1W | 0.8376 |
N1i—Co1—N1ii | 81.59 (13) | O1viii—Fe1—O1 | 81.1 (2) |
N1i—Co1—N1iii | 93.20 (13) | O1ix—Fe1—O1 | 92.87 (17) |
N1ii—Co1—N1iii | 92.88 (9) | O1x—Fe1—O1 | 93.8 (3) |
N1i—Co1—N1iv | 92.88 (9) | C5—N1—C1 | 117.1 (3) |
N1ii—Co1—N1iv | 93.20 (13) | C5—N1—Co1 | 128.1 (2) |
N1iii—Co1—N1iv | 171.98 (13) | C1—N1—Co1 | 114.69 (19) |
N1i—Co1—N1 | 92.88 (9) | N1—C1—C2 | 121.4 (3) |
N1ii—Co1—N1 | 171.98 (13) | N1—C1—C1iii | 114.47 (16) |
N1iii—Co1—N1 | 81.59 (13) | C2—C1—C1iii | 124.1 (2) |
N1iv—Co1—N1 | 92.88 (9) | C6—O1—Fe1 | 115.4 (3) |
N1i—Co1—N1v | 171.98 (13) | C1—C2—C3 | 119.8 (3) |
N1ii—Co1—N1v | 92.88 (9) | C1—C2—H2 | 120.1 |
N1iii—Co1—N1v | 92.88 (9) | C3—C2—H2 | 120.1 |
N1iv—Co1—N1v | 81.59 (13) | C4—C3—C2 | 118.8 (3) |
N1—Co1—N1v | 93.20 (13) | C4—C3—H3 | 120.6 |
O1vi—Fe1—O1vii | 81.1 (2) | C2—C3—H3 | 120.6 |
O1vi—Fe1—O1viii | 93.8 (3) | C5—C4—C3 | 119.1 (3) |
O1vii—Fe1—O1viii | 92.87 (17) | C5—C4—H4 | 120.5 |
O1vi—Fe1—O1ix | 92.87 (17) | C3—C4—H4 | 120.5 |
O1vii—Fe1—O1ix | 93.8 (3) | N1—C5—C4 | 123.7 (3) |
O1viii—Fe1—O1ix | 171.3 (2) | N1—C5—H5 | 118.1 |
O1vi—Fe1—O1x | 171.3 (2) | C4—C5—H5 | 118.1 |
O1vii—Fe1—O1x | 92.87 (17) | O2—C6—O1 | 127.0 (5) |
O1viii—Fe1—O1x | 92.87 (17) | O2—C6—C6viii | 119.0 (4) |
O1ix—Fe1—O1x | 81.1 (2) | O1—C6—C6viii | 114.0 (3) |
O1vi—Fe1—O1 | 92.87 (17) | O1Wxi—O1W—H1W | 61.2 |
O1vii—Fe1—O1 | 171.3 (2) | ||
N1i—Co1—N1—C5 | −83.9 (2) | O1viii—Fe1—O1—C6 | 0.1 (3) |
N1iii—Co1—N1—C5 | −176.7 (3) | O1ix—Fe1—O1—C6 | −173.5 (4) |
N1iv—Co1—N1—C5 | 9.1 (3) | O1x—Fe1—O1—C6 | −92.2 (4) |
N1v—Co1—N1—C5 | 90.9 (3) | N1—C1—C2—C3 | 1.8 (5) |
N1i—Co1—N1—C1 | 91.8 (2) | C1iii—C1—C2—C3 | −177.6 (3) |
N1iii—Co1—N1—C1 | −1.05 (14) | C1—C2—C3—C4 | −1.5 (5) |
N1iv—Co1—N1—C1 | −175.22 (19) | C2—C3—C4—C5 | −0.1 (5) |
N1v—Co1—N1—C1 | −93.5 (2) | C1—N1—C5—C4 | −1.3 (5) |
C5—N1—C1—C2 | −0.4 (4) | Co1—N1—C5—C4 | 174.3 (2) |
Co1—N1—C1—C2 | −176.6 (2) | C3—C4—C5—N1 | 1.6 (5) |
C5—N1—C1—C1iii | 179.0 (3) | Fe1—O1—C6—O2 | 178.4 (5) |
Co1—N1—C1—C1iii | 2.9 (4) | Fe1—O1—C6—C6viii | −0.2 (8) |
O1vi—Fe1—O1—C6 | 93.5 (5) |
Symmetry codes: (i) −y+1, x−y+1, z; (ii) −x+y, y, −z+1; (iii) x, x−y+1, −z+1; (iv) −x+y, −x+1, z; (v) −y+1, −x+1, −z+1; (vi) −x+y+1, −x+1, z; (vii) x, x−y, −z; (viii) −x+y+1, y, −z; (ix) −y+1, x−y, z; (x) −y+1, −x+1, −z; (xi) −y+2, −x+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Co(C10H8N2)3][Fe(C2O4)3]·H2O |
Mr | 865.42 |
Crystal system, space group | Hexagonal, P622 |
Temperature (K) | 293 |
a, c (Å) | 13.056 (2), 12.480 (3) |
V (Å3) | 1842.3 (7) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.92 |
Crystal size (mm) | 0.60 × 0.40 × 0.20 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur/Sapphire3 diffractometer |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2009) |
Tmin, Tmax | 0.608, 0.838 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 17786, 1807, 1393 |
Rint | 0.070 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.063, 0.155, 1.04 |
No. of reflections | 1807 |
No. of parameters | 90 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.36, −0.83 |
Absolute structure | Flack (1983), 699 Friedel pairs |
Absolute structure parameter | 0.57 (3) |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2009), CrysAlis RED (Oxford Diffraction, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009), publCIF (Westrip, 2010).
Acknowledgements
This work has been partially supported by the State Fund for Fundamental Research of Ukraine (Project 28.3/017). We also thank Viktoriya V. Dyakonenko for the single-crystal data collection.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Developing the direct synthesis approach (Makhankova, 2011) we have investigated the following system:
Co – (NH4)3[Fe(Ox)3].3H2O – bipy – 2 en.2HCl – CH3CN (in open air), where bipy = 2,2'-bipyridine, Ox = oxalate anion, en = ethylenediamine, aiming to prepare heterometallic (Co/Fe) mixed-ligand (bipy/en) complex. A pale pink precepitate that formed as a result of the reaction turned out to be a mixture with traces of undissolved cobalt powder. Recrystallization of the mixture from hot water allowed to isolate little amount of crystals of a new complex, [Co(bipy)3][Fe(Ox)3].H2O. Structure of the complex was determined by X-ray diffraction analysis.
The crystal structure of the title compound is highly symmetrical with two sets of complex ions. The asymmetric unit contains one sixth of a [Co(bipy)3]3+ cation and one sixth of a [Fe(Ox)3]3- anion (Fig. 1) with metal centers occupying positions with site symmetry 3.2. There are two sets of complex ions in the unit cell. All metal atoms are six coordinated (CoN6 and FeO6 chromophores). The Fe–O bond lengths are equal of 2.000 (4) Å and are typical for [Fe(Ox)3]3- (Chygorin et al., 2010, Coronado et al., 2000, Zhang et al., 2009) while the Co–N bond length value of 1.980 (2) Å is much larger than observed previously in [Co(bipy)3]3+ fragments (1.89 – 1.96 Å) (Devi et al., 2003, Jun & Zhang, 2010, Yanagi et al., 1981). Due to the rigidity of the bidentate bipyridine and oxalate ligand molecules both the cations and anions show a trigonal structure distortion Oh(D3d) → D3h which should be recognized by the cis angles ranging from 81.92 (14)° to 92.87 (14)° for N–Co–N and from 80.7 (2)° to 94.6 (3)° for O–Fe–O. Trans N–Co–N and O–Fe–O angles are of 172.44 (15)° and 170.3 (3)°, respectively. More comprehensive measure of trigonal distortion is dihedral angle criterion according to which dihedral angles should be all of 70.5° for a perfect octahedron or 3×0°, 3×120° and 6×90° for a trigonal prism (Muetterties & Guggenberger, 1974). In our case, corresponding angles sets are 3×64.5°, 3×78.9° and 6×69.6° for CoN6 and 3×62.1°, 3×80.7° and 6×70.0° for FeO6 defining polyhedra as being closer to D3d octahedra.
In the crystal cobalt and iron complex ions are arranged alternately along their C3-axes parallel to [001] direction forming chains (Fig. 2) with the closest Co···Fe separation of ca 6.2 Å. The chains are packed in a hexagonal manner (Fig. 3) and the water molecules occupy voids inside the hexagonal channels. Hydrogen atoms of water molecules are disordered to three positions accordingly to the symmetry of the channels.
The bond valence sum analysis applied to the appropriate bond lengths leads to the +3 oxidation states for both metals: 3.22 (Co) and 3.00 (Fe) using the bond valence parameters from http://www.iucr.org/resources/data/datasets/bond-valence-parameters.
It is worth noting that the described complex is the first known crystal structure with ratio [M(bipy)3]3+:[M(Ox)3]3- equal to 1:1.