metal-organic compounds
Bis[[aqua(1H-imidazo[4,5-f][1,10]phenanthroline-κ2N6,N7)cadmium]bis(μ-pyridine-2,3-dicarboxylato)-κ3N,O2:O3;κ3O3:N,O2]
aCollege of Chemistry and Materials Science, Fujian Normal University, Fuzhou, Fujian 350007, People's Republic of China
*Correspondence e-mail: shenlin@fjnu.edu.cn
In the title compound, [Cd2(C7H3NO4)2(C13H8N4)2(H2O)2], the CdII ion is six-coordinated by two N atoms from a 1H-imidazo[4,5-f][1,10]phenanthroline (IP) ligand, one N atom and one O atom from a pyridine-2,3-dicarboxylate (pdc) ligand, one O atom from another pdc ligand and one water molecule in a distorted octahedral geometry. Two CdII ions are bridged by a pair of pdc ligands, forming a centrosymmetric dinuclear structure. Neighboring dinuclear units are linked by the coordinated water molecules through O—H⋯N and O—H⋯O hydrogen bonds, forming a layer parallel to (011). The layers are further linked into a three-dimensional network through N—H⋯O hydrogen bonds. π–π interactions between the IP ligands further stabilize the supramolecular structure [centroid–centroid distances = 3.579 (3), 3.686 (3), 3.710 (3), 3.766 (3) and 3.841 (3) Å].
Related literature
For general background to metal–organic coordination polymers, see: Wang, Chen, Gao et al. (2010); Wang et al. (2011). For related structures, see: Liu et al. (2009, 2011); Wang, Chen, Wang et al. (2010).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2002); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 1999); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S160053681200579X/hy2513sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681200579X/hy2513Isup2.hkl
A mixture of CdCl2.2.5H2O (0.3 mmol), H2pdc (0.3 mmol) and IP(0.3 mmol) in 8 ml distilled water was placed in a 18 ml Teflon-lined Parr acid digestion bomb and heated for 3 d at 433 K under autogenous pressure. Slow cooling of the reaction mixture to room temperature gave colorless prism crystals (yield: 30% based on Cd).
The water H atoms were located in a difference Fourier map and fixed in
with O—H = 0.84 Å and Uiso(H) = 1.2Ueq(O). Other H atoms were placed geometrically and refined as riding, with C—H = 0.93 and N—H = 0.86 Å and with Uiso(H) = 1.2Ueq(C, N).Data collection: CrystalClear (Rigaku, 2002); cell
CrystalClear (Rigaku, 2002); data reduction: CrystalClear (Rigaku, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 1999); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).[Cd2(C7H3NO4)2(C13H8N4)2(H2O)2] | Z = 1 |
Mr = 1031.51 | F(000) = 512 |
Triclinic, P1 | Dx = 1.899 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.474 (4) Å | Cell parameters from 2480 reflections |
b = 10.214 (5) Å | θ = 3.2–27.5° |
c = 12.641 (7) Å | µ = 1.26 mm−1 |
α = 80.333 (6)° | T = 293 K |
β = 72.974 (5)° | Prism, colorless |
γ = 80.170 (5)° | 0.20 × 0.20 × 0.15 mm |
V = 902.0 (8) Å3 |
Rigaku Mercury CCD diffractometer | 3028 independent reflections |
Radiation source: fine-focus sealed tube | 2814 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
Detector resolution: 14.6306 pixels mm-1 | θmax = 25.0°, θmin = 2.0° |
ω scans | h = −8→8 |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2002) | k = −12→12 |
Tmin = 0.710, Tmax = 1.000 | l = −15→13 |
5733 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.084 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0501P)2 + 0.6574P] where P = (Fo2 + 2Fc2)/3 |
3028 reflections | (Δ/σ)max < 0.001 |
280 parameters | Δρmax = 0.51 e Å−3 |
0 restraints | Δρmin = −0.47 e Å−3 |
[Cd2(C7H3NO4)2(C13H8N4)2(H2O)2] | γ = 80.170 (5)° |
Mr = 1031.51 | V = 902.0 (8) Å3 |
Triclinic, P1 | Z = 1 |
a = 7.474 (4) Å | Mo Kα radiation |
b = 10.214 (5) Å | µ = 1.26 mm−1 |
c = 12.641 (7) Å | T = 293 K |
α = 80.333 (6)° | 0.20 × 0.20 × 0.15 mm |
β = 72.974 (5)° |
Rigaku Mercury CCD diffractometer | 3028 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2002) | 2814 reflections with I > 2σ(I) |
Tmin = 0.710, Tmax = 1.000 | Rint = 0.022 |
5733 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.084 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.51 e Å−3 |
3028 reflections | Δρmin = −0.47 e Å−3 |
280 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.26858 (4) | 0.16248 (2) | 0.30239 (2) | 0.02641 (12) | |
N1 | 0.2719 (4) | 0.3800 (3) | 0.2016 (2) | 0.0242 (6) | |
N2 | 0.2600 (4) | 0.1574 (3) | 0.1127 (3) | 0.0294 (7) | |
N3 | 0.2066 (5) | 0.4622 (3) | −0.2285 (3) | 0.0344 (8) | |
H3A | 0.1959 | 0.4151 | −0.2761 | 0.041* | |
N4 | 0.2306 (5) | 0.6433 (3) | −0.1566 (3) | 0.0322 (7) | |
N5 | 0.2571 (4) | −0.0638 (3) | 0.3757 (3) | 0.0268 (7) | |
O1 | −0.0331 (3) | 0.1178 (2) | 0.3352 (2) | 0.0305 (6) | |
O2 | −0.1954 (4) | −0.0475 (3) | 0.3424 (3) | 0.0467 (8) | |
O3 | −0.2560 (4) | −0.2618 (3) | 0.5495 (2) | 0.0339 (6) | |
O4 | −0.1475 (4) | −0.3605 (3) | 0.3967 (2) | 0.0416 (7) | |
O5 | 0.5869 (4) | 0.1286 (3) | 0.2421 (2) | 0.0368 (7) | |
H5B | 0.6524 | 0.0746 | 0.2781 | 0.044* | |
H5C | 0.6230 | 0.2047 | 0.2285 | 0.044* | |
C1 | 0.2593 (5) | 0.3962 (3) | 0.0950 (3) | 0.0213 (7) | |
C2 | 0.2494 (5) | 0.2759 (4) | 0.0488 (3) | 0.0246 (8) | |
C3 | 0.2495 (7) | 0.0489 (4) | 0.0717 (4) | 0.0420 (10) | |
H3B | 0.2560 | −0.0331 | 0.1162 | 0.050* | |
C4 | 0.2294 (7) | 0.0509 (5) | −0.0348 (4) | 0.0483 (12) | |
H4A | 0.2227 | −0.0281 | −0.0600 | 0.058* | |
C5 | 0.2197 (6) | 0.1693 (4) | −0.1011 (3) | 0.0379 (10) | |
H5A | 0.2065 | 0.1721 | −0.1723 | 0.045* | |
C6 | 0.2298 (5) | 0.2876 (4) | −0.0618 (3) | 0.0255 (8) | |
C7 | 0.2241 (5) | 0.4174 (4) | −0.1214 (3) | 0.0266 (8) | |
C8 | 0.2397 (5) | 0.5300 (4) | −0.0796 (3) | 0.0251 (8) | |
C9 | 0.2572 (5) | 0.5218 (4) | 0.0316 (3) | 0.0241 (8) | |
C10 | 0.2717 (5) | 0.6327 (4) | 0.0795 (3) | 0.0291 (8) | |
H10A | 0.2711 | 0.7176 | 0.0389 | 0.035* | |
C11 | 0.2865 (6) | 0.6147 (4) | 0.1857 (3) | 0.0338 (9) | |
H11A | 0.2974 | 0.6867 | 0.2186 | 0.041* | |
C12 | 0.2849 (5) | 0.4865 (4) | 0.2443 (3) | 0.0304 (8) | |
H12A | 0.2935 | 0.4752 | 0.3173 | 0.036* | |
C13 | 0.2101 (6) | 0.5969 (4) | −0.2415 (4) | 0.0382 (10) | |
H13A | 0.1987 | 0.6517 | −0.3064 | 0.046* | |
C14 | 0.0898 (5) | −0.1061 (3) | 0.3911 (3) | 0.0223 (7) | |
C15 | 0.0544 (5) | −0.2352 (3) | 0.4378 (3) | 0.0231 (7) | |
C16 | 0.2012 (5) | −0.3232 (4) | 0.4680 (3) | 0.0270 (8) | |
H16A | 0.1830 | −0.4108 | 0.4990 | 0.032* | |
C17 | 0.3719 (5) | −0.2801 (4) | 0.4519 (3) | 0.0346 (9) | |
H17A | 0.4706 | −0.3379 | 0.4717 | 0.042* | |
C18 | 0.3952 (5) | −0.1499 (4) | 0.4060 (3) | 0.0342 (9) | |
H18A | 0.5111 | −0.1207 | 0.3957 | 0.041* | |
C19 | −0.0594 (5) | −0.0030 (4) | 0.3535 (3) | 0.0248 (8) | |
C20 | −0.1331 (5) | −0.2867 (3) | 0.4612 (3) | 0.0251 (8) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.03043 (17) | 0.02316 (17) | 0.02730 (19) | −0.00802 (11) | −0.01124 (12) | 0.00299 (12) |
N1 | 0.0313 (16) | 0.0207 (15) | 0.0204 (16) | −0.0054 (13) | −0.0088 (13) | 0.0032 (13) |
N2 | 0.0404 (18) | 0.0206 (15) | 0.0279 (18) | −0.0083 (14) | −0.0117 (14) | 0.0034 (14) |
N3 | 0.0405 (19) | 0.041 (2) | 0.0244 (17) | −0.0069 (15) | −0.0158 (15) | 0.0023 (15) |
N4 | 0.0382 (18) | 0.0333 (18) | 0.0243 (18) | −0.0107 (15) | −0.0082 (14) | 0.0041 (15) |
N5 | 0.0254 (15) | 0.0240 (16) | 0.0310 (18) | −0.0077 (13) | −0.0098 (13) | 0.0053 (14) |
O1 | 0.0305 (14) | 0.0234 (14) | 0.0375 (16) | −0.0064 (11) | −0.0130 (12) | 0.0063 (12) |
O2 | 0.0381 (16) | 0.0333 (16) | 0.076 (2) | −0.0140 (13) | −0.0342 (16) | 0.0161 (16) |
O3 | 0.0323 (14) | 0.0474 (17) | 0.0247 (15) | −0.0164 (12) | −0.0064 (12) | −0.0027 (13) |
O4 | 0.0490 (17) | 0.0441 (17) | 0.0419 (18) | −0.0124 (14) | −0.0175 (14) | −0.0179 (15) |
O5 | 0.0304 (14) | 0.0301 (14) | 0.0506 (18) | −0.0043 (12) | −0.0175 (13) | 0.0048 (13) |
C1 | 0.0225 (17) | 0.0208 (17) | 0.0184 (18) | −0.0057 (14) | −0.0036 (13) | 0.0032 (14) |
C2 | 0.0218 (17) | 0.0294 (19) | 0.0225 (19) | −0.0063 (15) | −0.0048 (14) | −0.0023 (16) |
C3 | 0.066 (3) | 0.023 (2) | 0.039 (3) | −0.010 (2) | −0.015 (2) | −0.0001 (19) |
C4 | 0.078 (3) | 0.035 (2) | 0.039 (3) | −0.015 (2) | −0.018 (2) | −0.012 (2) |
C5 | 0.048 (2) | 0.042 (2) | 0.028 (2) | −0.011 (2) | −0.0103 (18) | −0.0083 (19) |
C6 | 0.0297 (19) | 0.031 (2) | 0.0188 (19) | −0.0092 (16) | −0.0079 (15) | −0.0032 (16) |
C7 | 0.0263 (18) | 0.037 (2) | 0.0177 (19) | −0.0069 (16) | −0.0080 (15) | −0.0006 (17) |
C8 | 0.0274 (18) | 0.0268 (19) | 0.0191 (19) | −0.0081 (15) | −0.0055 (14) | 0.0061 (16) |
C9 | 0.0230 (17) | 0.0259 (18) | 0.024 (2) | −0.0058 (14) | −0.0084 (15) | 0.0010 (16) |
C10 | 0.037 (2) | 0.0213 (18) | 0.028 (2) | −0.0056 (16) | −0.0095 (17) | 0.0016 (16) |
C11 | 0.048 (2) | 0.027 (2) | 0.028 (2) | −0.0107 (18) | −0.0090 (18) | −0.0086 (18) |
C12 | 0.043 (2) | 0.0273 (19) | 0.024 (2) | −0.0056 (17) | −0.0148 (17) | −0.0013 (16) |
C13 | 0.042 (2) | 0.041 (2) | 0.030 (2) | −0.0084 (19) | −0.0175 (19) | 0.0169 (19) |
C14 | 0.0243 (17) | 0.0233 (17) | 0.0188 (18) | −0.0049 (14) | −0.0054 (14) | 0.0001 (15) |
C15 | 0.0287 (18) | 0.0220 (17) | 0.0210 (19) | −0.0059 (14) | −0.0090 (15) | −0.0028 (15) |
C16 | 0.034 (2) | 0.0204 (18) | 0.027 (2) | −0.0039 (15) | −0.0114 (16) | 0.0024 (16) |
C17 | 0.028 (2) | 0.032 (2) | 0.042 (2) | 0.0004 (17) | −0.0141 (17) | 0.0034 (19) |
C18 | 0.0234 (19) | 0.037 (2) | 0.042 (2) | −0.0077 (16) | −0.0137 (17) | 0.0089 (19) |
C19 | 0.0256 (18) | 0.0250 (19) | 0.0243 (19) | −0.0073 (15) | −0.0087 (15) | 0.0029 (16) |
C20 | 0.0299 (19) | 0.0200 (17) | 0.028 (2) | −0.0065 (15) | −0.0141 (16) | 0.0035 (16) |
Cd1—O3i | 2.246 (3) | C3—C4 | 1.394 (6) |
Cd1—O5 | 2.260 (3) | C3—H3B | 0.9300 |
Cd1—O1 | 2.281 (3) | C4—C5 | 1.355 (6) |
Cd1—N5 | 2.347 (3) | C4—H4A | 0.9300 |
Cd1—N1 | 2.369 (3) | C5—C6 | 1.402 (5) |
Cd1—N2 | 2.427 (3) | C5—H5A | 0.9300 |
N1—C12 | 1.322 (5) | C6—C7 | 1.411 (5) |
N1—C1 | 1.359 (4) | C7—C8 | 1.378 (5) |
N2—C3 | 1.323 (5) | C8—C9 | 1.437 (5) |
N2—C2 | 1.342 (5) | C9—C10 | 1.404 (5) |
N3—C13 | 1.361 (5) | C10—C11 | 1.358 (5) |
N3—C7 | 1.391 (5) | C10—H10A | 0.9300 |
N3—H3A | 0.8600 | C11—C12 | 1.392 (6) |
N4—C13 | 1.300 (5) | C11—H11A | 0.9300 |
N4—C8 | 1.387 (5) | C12—H12A | 0.9300 |
N5—C18 | 1.340 (5) | C13—H13A | 0.9300 |
N5—C14 | 1.342 (4) | C14—C15 | 1.387 (5) |
O1—C19 | 1.255 (4) | C14—C19 | 1.523 (5) |
O2—C19 | 1.234 (4) | C15—C16 | 1.397 (5) |
O3—C20 | 1.253 (5) | C15—C20 | 1.512 (5) |
O4—C20 | 1.237 (4) | C16—C17 | 1.368 (5) |
O5—H5B | 0.8400 | C16—H16A | 0.9300 |
O5—H5C | 0.8400 | C17—C18 | 1.377 (6) |
C1—C9 | 1.394 (5) | C17—H17A | 0.9300 |
C1—C2 | 1.466 (5) | C18—H18A | 0.9300 |
C2—C6 | 1.432 (5) | ||
O3i—Cd1—O5 | 95.63 (10) | C6—C5—H5A | 120.1 |
O3i—Cd1—O1 | 103.29 (9) | C5—C6—C7 | 126.2 (3) |
O5—Cd1—O1 | 157.08 (10) | C5—C6—C2 | 117.1 (4) |
O3i—Cd1—N5 | 103.40 (11) | C7—C6—C2 | 116.7 (3) |
O5—Cd1—N5 | 91.49 (10) | C8—C7—N3 | 105.3 (3) |
O1—Cd1—N5 | 71.77 (9) | C8—C7—C6 | 123.7 (3) |
O3i—Cd1—N1 | 86.07 (11) | N3—C7—C6 | 130.9 (3) |
O5—Cd1—N1 | 89.37 (10) | C7—C8—N4 | 111.1 (3) |
O1—Cd1—N1 | 104.56 (10) | C7—C8—C9 | 120.9 (3) |
N5—Cd1—N1 | 170.36 (10) | N4—C8—C9 | 127.9 (3) |
O3i—Cd1—N2 | 154.99 (11) | C1—C9—C10 | 118.6 (3) |
O5—Cd1—N2 | 88.28 (11) | C1—C9—C8 | 117.7 (3) |
O1—Cd1—N2 | 80.06 (10) | C10—C9—C8 | 123.7 (3) |
N5—Cd1—N2 | 101.17 (10) | C11—C10—C9 | 119.3 (4) |
N1—Cd1—N2 | 69.25 (10) | C11—C10—H10A | 120.4 |
C12—N1—C1 | 118.5 (3) | C9—C10—H10A | 120.4 |
C12—N1—Cd1 | 123.0 (2) | C10—C11—C12 | 118.9 (3) |
C1—N1—Cd1 | 118.4 (2) | C10—C11—H11A | 120.6 |
C3—N2—C2 | 118.3 (3) | C12—C11—H11A | 120.6 |
C3—N2—Cd1 | 124.9 (3) | N1—C12—C11 | 123.3 (3) |
C2—N2—Cd1 | 116.6 (2) | N1—C12—H12A | 118.3 |
C13—N3—C7 | 105.0 (3) | C11—C12—H12A | 118.3 |
C13—N3—H3A | 127.5 | N4—C13—N3 | 115.2 (4) |
C7—N3—H3A | 127.5 | N4—C13—H13A | 122.4 |
C13—N4—C8 | 103.3 (3) | N3—C13—H13A | 122.4 |
C18—N5—C14 | 118.7 (3) | N5—C14—C15 | 122.5 (3) |
C18—N5—Cd1 | 126.9 (2) | N5—C14—C19 | 115.6 (3) |
C14—N5—Cd1 | 114.3 (2) | C15—C14—C19 | 121.9 (3) |
C19—O1—Cd1 | 117.3 (2) | C14—C15—C16 | 117.7 (3) |
C20—O3—Cd1i | 135.5 (2) | C14—C15—C20 | 124.8 (3) |
Cd1—O5—H5B | 122.1 | C16—C15—C20 | 117.5 (3) |
Cd1—O5—H5C | 106.4 | C17—C16—C15 | 119.8 (3) |
H5B—O5—H5C | 110.6 | C17—C16—H16A | 120.1 |
N1—C1—C9 | 121.4 (3) | C15—C16—H16A | 120.1 |
N1—C1—C2 | 117.3 (3) | C16—C17—C18 | 119.0 (4) |
C9—C1—C2 | 121.2 (3) | C16—C17—H17A | 120.5 |
N2—C2—C6 | 122.1 (3) | C18—C17—H17A | 120.5 |
N2—C2—C1 | 118.2 (3) | N5—C18—C17 | 122.4 (3) |
C6—C2—C1 | 119.7 (3) | N5—C18—H18A | 118.8 |
N2—C3—C4 | 123.5 (4) | C17—C18—H18A | 118.8 |
N2—C3—H3B | 118.2 | O2—C19—O1 | 125.9 (3) |
C4—C3—H3B | 118.2 | O2—C19—C14 | 116.0 (3) |
C5—C4—C3 | 119.2 (4) | O1—C19—C14 | 118.0 (3) |
C5—C4—H4A | 120.4 | O4—C20—O3 | 124.7 (3) |
C3—C4—H4A | 120.4 | O4—C20—C15 | 117.2 (3) |
C4—C5—C6 | 119.8 (4) | O3—C20—C15 | 117.7 (3) |
C4—C5—H5A | 120.1 |
Symmetry code: (i) −x, −y, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O4ii | 0.86 | 1.86 | 2.691 (5) | 164 |
O5—H5B···O2iii | 0.84 | 1.80 | 2.633 (5) | 174 |
O5—H5C···N4iv | 0.84 | 1.99 | 2.799 (5) | 161 |
Symmetry codes: (ii) −x, −y, −z; (iii) x+1, y, z; (iv) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | [Cd2(C7H3NO4)2(C13H8N4)2(H2O)2] |
Mr | 1031.51 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 7.474 (4), 10.214 (5), 12.641 (7) |
α, β, γ (°) | 80.333 (6), 72.974 (5), 80.170 (5) |
V (Å3) | 902.0 (8) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 1.26 |
Crystal size (mm) | 0.20 × 0.20 × 0.15 |
Data collection | |
Diffractometer | Rigaku Mercury CCD diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2002) |
Tmin, Tmax | 0.710, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5733, 3028, 2814 |
Rint | 0.022 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.084, 1.06 |
No. of reflections | 3028 |
No. of parameters | 280 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.51, −0.47 |
Computer programs: CrystalClear (Rigaku, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O4i | 0.86 | 1.86 | 2.691 (5) | 164 |
O5—H5B···O2ii | 0.84 | 1.80 | 2.633 (5) | 174 |
O5—H5C···N4iii | 0.84 | 1.99 | 2.799 (5) | 161 |
Symmetry codes: (i) −x, −y, −z; (ii) x+1, y, z; (iii) −x+1, −y+1, −z. |
Acknowledgements
This project was supported financially by the National Natural Science Foundation of China (grant No. 21171037) and the Natural Science Foundation of Fujian Province (grant No. 2008I0013).
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Metal organic frameworks (MOFs) have received much attention due to their intriguing structural diversity and tremendous potential applications in catalysis, optics, electrics, magnetism, and so on (Wang, Chen, Gao et al., 2010; Wang et al., 2011). When used to build supramolecular architectures, 1H-imidazol(4,5-f)(1,10-phenanthroline) (IP) may have profound influence on the final structrues of MOFs, owing to its excellent coordinating ability, large conjugated system and the presence of the N—H group (Liu et al., 2009, 2011; Wang, Chen, Wang et al., 2010). The title compound was prepared based on IP and pyridine-2,3-dicarboxylic acid (H2pdc) ligands.
The asymmetric unit of the title compound consists of one half of the dimeric complex, which lies about an inversion center. The CdII atom is six-coordinated by two N atoms from an IP ligand, one N atom and one O atom from a pdc ligand, one O atom from another pdc ligand and one O atom from an aqua group (Fig. 1). The two CdII atoms are bridged by a pair of pdc ligands, forming a centrosymmetric dinuclear structure.
It is noteworthy that various hydrogen bonds are observed in the title compound. (a) O—H···N and O—H···O hydrogen bonds involve the coordinated water molecule O5, the imidazole N4 and carboxylate O2 atoms (Table 1). These two hydrogen bonds connect neighboring dinuclear units, forming a layer. (b) An N—H···O hydrogen bond between the imine group N3—H3A and the carboxylate O4 atom (Table 1) extends the layers into a three-dimensional network (Fig. 2). The offset π–π interactions between the IP ligands, with centroid–centroid distances ranging from 3.579 (3) to 3.841 (3) Å, further stabilize the supramolecular structure.