organic compounds
4-(4-Methoxyphenyl)naphtho[2,3-b]thiophene
aDepartment of Chemistry, Madras Christian College (Autonomous), Chennai 600 059, Tamil Nadu, India, and bDepartment of Chemistry, Sri Sairam Engineering College, Chennai 600 044, Tamil Nadu, India
*Correspondence e-mail: vasu_sbm@yahoo.com, rjkmcc@yahoo.com
In the title compound, C19H14OS, the naphthothiophene moiety is almost planar except for the S atom of the five-membered ring, which is situated 0.047 (6) Å out of the C4 plane (with an r.m.s. deviation of fitted atoms = 0.0009 Å). The dihedral angle between the naphthothiophene plane and the attached methoxyphenyl ring is 67.6 (2)°. In the crystal, a C—H⋯π interaction is observed between a methoxyphenyl C—H group and the outer benzene ring of the naphthothiophene moiety. The five-membered ring of the naphthothiophene moiety is disordered, with the S and opposite non-fused C atom approximately exchanging positions, with a site-occupancy factors of 0.808 (3) and 0.187 (3).
Related literature
For related thiophene structures, see: Labat & Halfpenny (2005); Thenmozhi et al. (2008). For related see: Jones et al. (1984); Palani et al. (2006). For biological activity of naphthothiophenes, see: Zuse et al. (2007, 2006); Dallemagne et al. (2003); Misra & Amin (1990).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2004); cell APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536812005697/im2353sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812005697/im2353Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812005697/im2353Isup3.cml
To a solution of (2-(acetoxy(4-methoxyphenyl)methyl)phenyl) (thiophen-2-yl)methylacetate (0.5 g, 1.12 mmol) in anhydrous dichloromethane (20 ml), BF3 × Et2O (40 mg) was added. The reaction mixture was then stirred at room temperature for 4 h under N2 atmosphere. Removal of the solvent followed by
(n-hexane/ethylacetate 98:2) led to the isolation of the product 4-(4-methoxyphenyl)naphtho[2,3-b]thiophene (yield: 56%). The product was recrystallized from chloroform and was obtained as a colourless crystals.As S1 and C2 are disordered,
is carried out with a second component for the thiophene ring with atoms C2', C1', S1' located near S1, C1 and C2, respectively. Disordered pairs of the same sites were restrained to have same thermal parameter. The distance C3—S1' was restrained to be 1.70 Å. Similarily, distances C1—C2' and C2'—C12 were restrained to be around 1.4 Å and 1.52 Å during the The two components were assigned variable occupancy factors during with the sum of their occupancies restrained as 1 resulting in a refined s.o.f. ratio of 81% and 19%. H atoms were constrained as riding atoms with d(C—H) = 0.93 Å and Uiso(H) = 1.2Ueq(C) for aromatic CH groups and 0.96 Å and Uiso(H) = 1.5Ueq(C) for the methyl group.Data collection: APEX2 (Bruker, 2004); cell
APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. ORTEP plot of the title compound with thermal ellipsoids drawn at the 40% probability level. | |
Fig. 2. Molecular packing diagram. C—H···π interactions are shown as dotted lines. |
C19H14OS | F(000) = 608 |
Mr = 290.36 | Dx = 1.328 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 4322 reflections |
a = 9.2961 (5) Å | θ = 2.7–24.5° |
b = 15.9931 (7) Å | µ = 0.22 mm−1 |
c = 10.0896 (6) Å | T = 293 K |
β = 104.580 (3)° | Block, pale yellow |
V = 1451.75 (13) Å3 | 0.30 × 0.20 × 0.20 mm |
Z = 4 |
Bruker Kappa APEXII CCD diffractometer | 2553 independent reflections |
Radiation source: fine-focus sealed tube | 2223 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
ω and ϕ scans | θmax = 25.0°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | h = −11→11 |
Tmin = 0.912, Tmax = 0.961 | k = −19→19 |
15008 measured reflections | l = −11→11 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.054 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.150 | H-atom parameters constrained |
S = 1.11 | w = 1/[σ2(Fo2) + (0.0618P)2 + 1.0365P] where P = (Fo2 + 2Fc2)/3 |
2553 reflections | (Δ/σ)max < 0.001 |
196 parameters | Δρmax = 0.33 e Å−3 |
4 restraints | Δρmin = −0.35 e Å−3 |
C19H14OS | V = 1451.75 (13) Å3 |
Mr = 290.36 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 9.2961 (5) Å | µ = 0.22 mm−1 |
b = 15.9931 (7) Å | T = 293 K |
c = 10.0896 (6) Å | 0.30 × 0.20 × 0.20 mm |
β = 104.580 (3)° |
Bruker Kappa APEXII CCD diffractometer | 2553 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | 2223 reflections with I > 2σ(I) |
Tmin = 0.912, Tmax = 0.961 | Rint = 0.024 |
15008 measured reflections |
R[F2 > 2σ(F2)] = 0.054 | 4 restraints |
wR(F2) = 0.150 | H-atom parameters constrained |
S = 1.11 | Δρmax = 0.33 e Å−3 |
2553 reflections | Δρmin = −0.35 e Å−3 |
196 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.5082 (5) | −0.0475 (3) | 0.6960 (6) | 0.0644 (14) | 0.808 (3) |
H1 | 0.4432 | −0.0894 | 0.7079 | 0.077* | 0.808 (3) |
C2 | 0.6679 (6) | −0.0682 (3) | 0.6871 (5) | 0.0614 (3) | 0.808 (3) |
H2 | 0.7162 | −0.1196 | 0.6943 | 0.074* | 0.808 (3) |
S1 | 0.45408 (12) | 0.05754 (8) | 0.68296 (10) | 0.0614 (3) | 0.808 (3) |
C1' | 0.461 (3) | −0.0280 (15) | 0.677 (3) | 0.0644 (14) | 0.187 (3) |
H1' | 0.3766 | −0.0550 | 0.6898 | 0.077* | 0.187 (3) |
C2' | 0.4755 (15) | 0.0563 (14) | 0.646 (3) | 0.0614 (3) | 0.187 (3) |
H2' | 0.3939 | 0.0917 | 0.6199 | 0.074* | 0.187 (3) |
S1' | 0.6213 (5) | −0.0676 (3) | 0.6865 (5) | 0.0614 (3) | 0.187 (3) |
C3 | 0.7222 (3) | 0.01533 (15) | 0.6642 (3) | 0.0490 (6) | |
C4 | 0.8635 (3) | 0.02564 (16) | 0.6515 (3) | 0.0515 (6) | |
H4 | 0.9258 | −0.0204 | 0.6564 | 0.062* | |
C5 | 0.9148 (3) | 0.10577 (17) | 0.6308 (2) | 0.0461 (6) | |
C6 | 1.0633 (3) | 0.1195 (2) | 0.6226 (3) | 0.0605 (8) | |
H6 | 1.1268 | 0.0741 | 0.6279 | 0.073* | |
C7 | 1.1118 (3) | 0.1930 (2) | 0.6081 (3) | 0.0631 (8) | |
H7 | 1.2106 | 0.1997 | 0.6059 | 0.076* | |
C8 | 1.0209 (3) | 0.2633 (2) | 0.5954 (3) | 0.0630 (8) | |
H8 | 1.0603 | 0.3153 | 0.5833 | 0.076* | |
C9 | 0.8833 (3) | 0.25843 (16) | 0.6001 (2) | 0.0452 (6) | |
H9 | 0.8252 | 0.3064 | 0.5910 | 0.054* | |
C10 | 0.8187 (3) | 0.17623 (15) | 0.6198 (2) | 0.0407 (5) | |
C11 | 0.6717 (3) | 0.16559 (15) | 0.6331 (2) | 0.0409 (5) | |
C12 | 0.6285 (3) | 0.08554 (15) | 0.6572 (2) | 0.0437 (6) | |
C13 | 0.5697 (2) | 0.23754 (15) | 0.6292 (2) | 0.0409 (5) | |
C14 | 0.5147 (3) | 0.28478 (16) | 0.5126 (3) | 0.0484 (6) | |
H14 | 0.5416 | 0.2712 | 0.4325 | 0.058* | |
C15 | 0.4202 (3) | 0.35206 (17) | 0.5124 (3) | 0.0490 (6) | |
H15 | 0.3842 | 0.3830 | 0.4328 | 0.059* | |
C16 | 0.3800 (3) | 0.37276 (15) | 0.6307 (2) | 0.0426 (6) | |
C17 | 0.4321 (3) | 0.32557 (16) | 0.7474 (3) | 0.0461 (6) | |
H17 | 0.4038 | 0.3387 | 0.8269 | 0.055* | |
C18 | 0.5258 (3) | 0.25921 (16) | 0.7463 (2) | 0.0457 (6) | |
H18 | 0.5606 | 0.2281 | 0.8259 | 0.055* | |
C19 | 0.2441 (4) | 0.4937 (2) | 0.5322 (3) | 0.0717 (9) | |
H19A | 0.3303 | 0.5160 | 0.5086 | 0.107* | |
H19B | 0.1878 | 0.5385 | 0.5576 | 0.107* | |
H19C | 0.1838 | 0.4645 | 0.4548 | 0.107* | |
O1 | 0.2893 (2) | 0.43755 (11) | 0.64381 (19) | 0.0548 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.057 (4) | 0.077 (3) | 0.056 (3) | −0.031 (2) | 0.010 (3) | 0.005 (2) |
C2 | 0.0525 (6) | 0.0696 (6) | 0.0625 (7) | −0.0089 (4) | 0.0150 (4) | 0.0068 (5) |
S1 | 0.0525 (6) | 0.0696 (6) | 0.0625 (7) | −0.0089 (4) | 0.0150 (4) | 0.0068 (5) |
C1' | 0.057 (4) | 0.077 (3) | 0.056 (3) | −0.031 (2) | 0.010 (3) | 0.005 (2) |
C2' | 0.0525 (6) | 0.0696 (6) | 0.0625 (7) | −0.0089 (4) | 0.0150 (4) | 0.0068 (5) |
S1' | 0.0525 (6) | 0.0696 (6) | 0.0625 (7) | −0.0089 (4) | 0.0150 (4) | 0.0068 (5) |
C3 | 0.0631 (16) | 0.0428 (14) | 0.0391 (13) | 0.0014 (12) | 0.0091 (11) | 0.0000 (10) |
C4 | 0.0606 (16) | 0.0466 (14) | 0.0472 (14) | 0.0126 (12) | 0.0137 (12) | 0.0023 (12) |
C5 | 0.0438 (13) | 0.0570 (15) | 0.0371 (13) | 0.0057 (11) | 0.0094 (10) | −0.0017 (11) |
C6 | 0.0478 (15) | 0.080 (2) | 0.0544 (17) | 0.0155 (15) | 0.0140 (12) | 0.0006 (15) |
C7 | 0.0409 (14) | 0.084 (2) | 0.0650 (18) | −0.0075 (14) | 0.0153 (13) | −0.0171 (16) |
C8 | 0.074 (2) | 0.0624 (18) | 0.0568 (17) | −0.0210 (15) | 0.0235 (15) | −0.0096 (14) |
C9 | 0.0533 (15) | 0.0466 (14) | 0.0373 (12) | 0.0071 (11) | 0.0145 (11) | −0.0074 (10) |
C10 | 0.0422 (12) | 0.0470 (13) | 0.0331 (11) | −0.0018 (10) | 0.0096 (9) | −0.0044 (10) |
C11 | 0.0443 (13) | 0.0436 (13) | 0.0341 (12) | 0.0007 (10) | 0.0085 (10) | −0.0003 (10) |
C12 | 0.0447 (13) | 0.0463 (14) | 0.0378 (12) | −0.0039 (11) | 0.0062 (10) | 0.0018 (10) |
C13 | 0.0390 (12) | 0.0432 (13) | 0.0406 (13) | −0.0014 (10) | 0.0101 (10) | 0.0012 (10) |
C14 | 0.0562 (15) | 0.0538 (15) | 0.0377 (13) | 0.0060 (12) | 0.0165 (11) | 0.0018 (11) |
C15 | 0.0533 (14) | 0.0518 (15) | 0.0405 (13) | 0.0071 (12) | 0.0091 (11) | 0.0084 (11) |
C16 | 0.0380 (12) | 0.0423 (13) | 0.0470 (14) | −0.0008 (10) | 0.0100 (10) | −0.0010 (11) |
C17 | 0.0497 (14) | 0.0503 (14) | 0.0408 (13) | 0.0018 (11) | 0.0162 (11) | −0.0008 (11) |
C18 | 0.0496 (14) | 0.0489 (14) | 0.0383 (13) | 0.0030 (11) | 0.0105 (11) | 0.0062 (11) |
C19 | 0.081 (2) | 0.0627 (19) | 0.073 (2) | 0.0271 (16) | 0.0225 (17) | 0.0152 (16) |
O1 | 0.0584 (11) | 0.0520 (11) | 0.0562 (11) | 0.0144 (9) | 0.0185 (9) | 0.0041 (9) |
C1—C2 | 1.545 (6) | C8—C9 | 1.294 (4) |
C1—S1 | 1.749 (5) | C8—H8 | 0.9300 |
C1—H1 | 0.9300 | C9—C10 | 1.479 (3) |
C2—C3 | 1.468 (5) | C9—H9 | 0.9300 |
C2—H2 | 0.9300 | C10—C11 | 1.417 (3) |
S1—C12 | 1.764 (3) | C11—C12 | 1.381 (3) |
C1'—C2' | 1.399 (10) | C11—C13 | 1.486 (3) |
C1'—S1' | 1.60 (3) | C13—C14 | 1.384 (3) |
C1'—H1' | 0.9300 | C13—C18 | 1.387 (3) |
C2'—C12 | 1.474 (10) | C14—C15 | 1.389 (4) |
C2'—H2' | 0.9300 | C14—H14 | 0.9300 |
S1'—C3 | 1.673 (5) | C15—C16 | 1.378 (4) |
C3—C4 | 1.362 (4) | C15—H15 | 0.9300 |
C3—C12 | 1.412 (4) | C16—O1 | 1.363 (3) |
C4—C5 | 1.401 (4) | C16—C17 | 1.379 (3) |
C4—H4 | 0.9300 | C17—C18 | 1.375 (3) |
C5—C6 | 1.420 (4) | C17—H17 | 0.9300 |
C5—C10 | 1.425 (3) | C18—H18 | 0.9300 |
C6—C7 | 1.281 (4) | C19—O1 | 1.419 (3) |
C6—H6 | 0.9300 | C19—H19A | 0.9600 |
C7—C8 | 1.392 (4) | C19—H19B | 0.9600 |
C7—H7 | 0.9300 | C19—H19C | 0.9600 |
C2—C1—S1 | 117.7 (4) | C11—C10—C5 | 119.9 (2) |
C2—C1—H1 | 121.2 | C11—C10—C9 | 123.6 (2) |
S1—C1—H1 | 121.2 | C5—C10—C9 | 116.4 (2) |
C3—C2—C1 | 100.8 (4) | C12—C11—C10 | 117.3 (2) |
C3—C2—H2 | 129.6 | C12—C11—C13 | 120.7 (2) |
C1—C2—H2 | 129.6 | C10—C11—C13 | 122.0 (2) |
C1—S1—C12 | 89.8 (2) | C11—C12—C3 | 122.9 (2) |
C2'—C1'—S1' | 105 (2) | C11—C12—C2' | 126.8 (10) |
C2'—C1'—H1' | 127.7 | C3—C12—C2' | 108.8 (10) |
S1'—C1'—H1' | 127.7 | C11—C12—S1 | 125.5 (2) |
C1'—C2'—C12 | 115.9 (19) | C3—C12—S1 | 111.67 (19) |
C1'—C2'—H2' | 122.1 | C2'—C12—S1 | 13.0 (10) |
C12—C2'—H2' | 122.1 | C14—C13—C18 | 117.6 (2) |
C1'—S1'—C3 | 103.0 (9) | C14—C13—C11 | 122.8 (2) |
C4—C3—C12 | 119.8 (2) | C18—C13—C11 | 119.6 (2) |
C4—C3—C2 | 120.3 (3) | C13—C14—C15 | 121.5 (2) |
C12—C3—C2 | 120.0 (3) | C13—C14—H14 | 119.2 |
C4—C3—S1' | 134.1 (3) | C15—C14—H14 | 119.2 |
C12—C3—S1' | 106.1 (3) | C16—C15—C14 | 119.6 (2) |
C2—C3—S1' | 13.9 (3) | C16—C15—H15 | 120.2 |
C3—C4—C5 | 119.8 (2) | C14—C15—H15 | 120.2 |
C3—C4—H4 | 120.1 | O1—C16—C15 | 125.2 (2) |
C5—C4—H4 | 120.1 | O1—C16—C17 | 115.2 (2) |
C4—C5—C6 | 121.5 (3) | C15—C16—C17 | 119.6 (2) |
C4—C5—C10 | 120.3 (2) | C18—C17—C16 | 120.2 (2) |
C6—C5—C10 | 118.2 (3) | C18—C17—H17 | 119.9 |
C7—C6—C5 | 121.6 (3) | C16—C17—H17 | 119.9 |
C7—C6—H6 | 119.2 | C17—C18—C13 | 121.5 (2) |
C5—C6—H6 | 119.2 | C17—C18—H18 | 119.3 |
C6—C7—C8 | 121.9 (3) | C13—C18—H18 | 119.3 |
C6—C7—H7 | 119.1 | O1—C19—H19A | 109.5 |
C8—C7—H7 | 119.1 | O1—C19—H19B | 109.5 |
C9—C8—C7 | 122.1 (3) | H19A—C19—H19B | 109.5 |
C9—C8—H8 | 119.0 | O1—C19—H19C | 109.5 |
C7—C8—H8 | 119.0 | H19A—C19—H19C | 109.5 |
C8—C9—C10 | 119.8 (2) | H19B—C19—H19C | 109.5 |
C8—C9—H9 | 120.1 | C16—O1—C19 | 118.1 (2) |
C10—C9—H9 | 120.1 | ||
S1—C1—C2—C3 | −1.9 (5) | C10—C11—C12—S1 | 177.76 (18) |
C2—C1—S1—C12 | 2.4 (4) | C13—C11—C12—S1 | 1.0 (3) |
S1'—C1'—C2'—C12 | −11 (3) | C4—C3—C12—C11 | 2.2 (4) |
C2'—C1'—S1'—C3 | 4 (2) | C2—C3—C12—C11 | −178.7 (3) |
C1—C2—C3—C4 | 179.4 (3) | S1'—C3—C12—C11 | −177.1 (3) |
C1—C2—C3—C12 | 0.2 (4) | C4—C3—C12—C2' | 168.8 (11) |
C1—C2—C3—S1' | −5.9 (12) | C2—C3—C12—C2' | −12.0 (11) |
C1'—S1'—C3—C4 | −174.8 (13) | S1'—C3—C12—C2' | −10.5 (11) |
C1'—S1'—C3—C12 | 4.3 (13) | C4—C3—C12—S1 | −177.7 (2) |
C1'—S1'—C3—C2 | 179 (2) | C2—C3—C12—S1 | 1.4 (3) |
C12—C3—C4—C5 | −0.3 (4) | S1'—C3—C12—S1 | 3.0 (3) |
C2—C3—C4—C5 | −179.4 (3) | C1'—C2'—C12—C11 | −179.4 (19) |
S1'—C3—C4—C5 | 178.8 (3) | C1'—C2'—C12—C3 | 15 (3) |
C3—C4—C5—C6 | 177.4 (2) | C1'—C2'—C12—S1 | −90 (5) |
C3—C4—C5—C10 | −1.5 (4) | C1—S1—C12—C11 | 178.0 (3) |
C4—C5—C6—C7 | −177.8 (3) | C1—S1—C12—C3 | −2.1 (3) |
C10—C5—C6—C7 | 1.2 (4) | C1—S1—C12—C2' | 78 (4) |
C5—C6—C7—C8 | −1.9 (5) | C12—C11—C13—C14 | −116.0 (3) |
C6—C7—C8—C9 | 1.2 (5) | C10—C11—C13—C14 | 67.3 (3) |
C7—C8—C9—C10 | 0.2 (4) | C12—C11—C13—C18 | 63.7 (3) |
C4—C5—C10—C11 | 1.5 (3) | C10—C11—C13—C18 | −112.9 (3) |
C6—C5—C10—C11 | −177.4 (2) | C18—C13—C14—C15 | 0.7 (4) |
C4—C5—C10—C9 | 179.2 (2) | C11—C13—C14—C15 | −179.6 (2) |
C6—C5—C10—C9 | 0.2 (3) | C13—C14—C15—C16 | 0.1 (4) |
C8—C9—C10—C11 | 176.7 (2) | C14—C15—C16—O1 | 179.5 (2) |
C8—C9—C10—C5 | −0.9 (3) | C14—C15—C16—C17 | −1.1 (4) |
C5—C10—C11—C12 | 0.3 (3) | O1—C16—C17—C18 | −179.3 (2) |
C9—C10—C11—C12 | −177.2 (2) | C15—C16—C17—C18 | 1.2 (4) |
C5—C10—C11—C13 | 177.0 (2) | C16—C17—C18—C13 | −0.4 (4) |
C9—C10—C11—C13 | −0.5 (3) | C14—C13—C18—C17 | −0.5 (4) |
C10—C11—C12—C3 | −2.1 (3) | C11—C13—C18—C17 | 179.7 (2) |
C13—C11—C12—C3 | −178.9 (2) | C15—C16—O1—C19 | −6.8 (4) |
C10—C11—C12—C2' | −166.3 (12) | C17—C16—O1—C19 | 173.7 (3) |
C13—C11—C12—C2' | 17.0 (13) |
D—H···A | D—H | H···A | D···A | D—H···A |
C17—H17···Cgi | 0.93 | 2.82 | 3.621 (3) | 145 |
Symmetry code: (i) x−1/2, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C19H14OS |
Mr | 290.36 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 9.2961 (5), 15.9931 (7), 10.0896 (6) |
β (°) | 104.580 (3) |
V (Å3) | 1451.75 (13) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.22 |
Crystal size (mm) | 0.30 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2004) |
Tmin, Tmax | 0.912, 0.961 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15008, 2553, 2223 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.054, 0.150, 1.11 |
No. of reflections | 2553 |
No. of parameters | 196 |
No. of restraints | 4 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.33, −0.35 |
Computer programs: APEX2 (Bruker, 2004), APEX2 and SAINT (Bruker, 2004), SAINT and XPREP (Bruker, 2004), SIR92 (Altomare et al., 1993), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C17—H17···Cgi | 0.93 | 2.822 | 3.621 (3) | 145 |
Symmetry code: (i) x−1/2, −y+1/2, z+1/2. |
Acknowledgements
The authors are grateful to the SAIF, IIT, Madras, Chennai, for the X-ray data collection.
References
Altomare, A., Cascarano, G., Giacovazzo, C. & Guagliardi, A. (1993). J. Appl. Cryst. 26, 343–350. CrossRef Web of Science IUCr Journals Google Scholar
Bruker (2004). APEX2. and SAINT-Plus. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Dallemagne, P., Khanh, L. P., Alsaïdi, A., Varlet, I., Collot, V., Paillet, M., Bureau, R. & Rault, S. (2003). Bioorg. Med. Chem. 11, 1161–1167. Web of Science CrossRef PubMed CAS Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Jones, C. D., Jevnikar, M. G., Pike, A. J., Peters, M. K., Black, L. J., Thompson, A. R., Falcone, J. F. & Clemens, J. A. (1984). J. Med. Chem. 27, 1057–1066. CrossRef CAS PubMed Web of Science Google Scholar
Labat, G. & Halfpenny, J. (2005). Acta Cryst. E61, o2813–o2814. Web of Science CSD CrossRef IUCr Journals Google Scholar
Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470. Web of Science CrossRef CAS IUCr Journals Google Scholar
Misra, B. & Amin, S. (1990). Chem. Res. Toxicol. 3(2), 93–97. CrossRef Web of Science Google Scholar
Palani, K., Amaladass, P., Mohanakrishnan, A. K. & Ponnuswamy, M. N. (2006). Acta Cryst. E62, o49–o51. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Thenmozhi, S., SubbiahPandi, A., Ranjith, S., Clement, J. A. & MohanaKrishnan, A. K. (2008). Acta Cryst. E64, o2432. Web of Science CSD CrossRef IUCr Journals Google Scholar
Zuse, A., Schmidt, P., Baasner, S., Böhm, K. J., Müller, K., Gerlach, M., Günther, E. G., Unger, E. & Prinz, H. (2006). J. Med. Chem. 49, 7816–7825. Web of Science CrossRef PubMed CAS Google Scholar
Zuse, A., Schmidt, P., Baasner, S., Böhm, K. J., Müller, K., Gerlach, M., Günther, E. G., Unger, E. & Prinz, H. (2007). J. Med. Chem. 50, 6059–6066. Web of Science CrossRef PubMed CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Biological evaluation of benzo/naphtho thiophene heterocycles has shown them to act as potential antibiological agents. Naphtho[2,3-b]thiophene derivatives were found to exhibit antiproliferative activity related to inhibition of tubulin polymerization (Zuse et al. 2007, 2006). Five-membered heterocycles fused to cyclopenta[c]thiophene are investigated as new antitumor agents (Dallemagne et al. 2003). Benzo[b]naphtho[2,1-d]thiophene derivatives are found as potentially important metabolites (Misra & Amin, 1990).
Fig. 1 shows the ORTEP representation of the molecular structure of the title compound with atoms at the 40% probability level. The five membered ring of the naphtho-thiophene moiety is disordered with sulfur (S1) and carbon (C2) approximately exchanging positions. The two portions of the moiety were assigned variable occupancy factors during refinement with sum of their occupancies restrained as 1 resulting in a refined s.o.f. ratio of 81% and 19%. In the naphtho thiophene moiety, S1 of the five membered ring in the major component is observed 0.047 (6) Å out of the (C1–C4) plane (0.058 (7) Å for the minor component). The latter atoms show a r.m.s. deviation of 0.0009 Å or 0.009 Å for the major and minor component, respectively. The dihedral angle between the mean plane of the naphtho-thiophene moiety and the methoxy-phenyl ring is 67.6 (2)°. Fig. 2 shows the packing of molecules in the unit cell. There is a C—H···π interaction between H17 (symmcode: 1.5 - x, -0.5 + y, 1.5 - z) and the phenyl ring (C5–C10). The distance between the H atom and centroid of the phenyl ring is 2.822 Å. Except for this C—H···π interaction, the packing is featureless.