organic compounds
N-(2-Iodophenyl)benzenecarboximidamide
aCollege of Biological and Environmental Engineering, Zhejiang University of Technology, Hangzhou 310014, People's Republic of China, and bZhejiang SiXian Pharmaceutical Co. Ltd, ShaoXing 312065, People's Republic of China
*Correspondence e-mail: yuguangw@zjut.edu.cn
The title compound, C13H11IN2, crystallizes with two independent molecules (A and B) in the The two aromatic rings are inclined to one another by 73.3 (2)° in molecule A, and by 74.4 (1)° in molecule B. In molecule A, the iodophenyl and the phenyl rings are inlclined to the N=C—N plane by 88.0 (4) and 19.0 (4)°, respectively. In molecule B the corresponding angles are 85.0 (4) and 20.7 (4)°, respectively. In the crystal, the two molecules are not parallel but have a dihedral angle between the iodophenyl rings of 8.6 (1)°, and 44.5 (2)° between the phenyl rings. The A and B molecules are linked vvia N—H⋯N hydrogen bonds to form –A–B–A–B– chains propagating along direction [100].
Related literature
For the application of et al. (2010); Bhosale et al. (2010); Deng & Mani (2010); Wang et al. (2011); Ohta et al. (2010). For details of the synthetic procedure to yield the title compound, see: Ma et al. (2011); Cortes-Salva et al. (2011).
in the synthesis of see: AttanasiExperimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S160053681200596X/im2355sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681200596X/im2355Isup2.hkl
Supporting information file. DOI: 10.1107/S160053681200596X/im2355Isup3.cml
The title compound was produced according to a methodology already described in the literature (Ma et al. 2011, Cortes-Salva et al. 2011): A round bottom flask (100 mL in volume) was charged with NaH (60% in mineral oil) (360 mg, 15.0 mmol, 60%, 1.5 equiv). Under a stream of nitrogen, DMSO (10 mL) was added, and the resulting suspension was cooled with an ice-water bath prior to the addition of the 2-iodo-phenylamine (11.0 mmol, 1.1 equiv) and benzonitrile (10.0 mmol). The mixture was kept at 0 ° for 50 min and then stirred at room temperature until the starting material was consumed as monitored by TLC analysis. Ice-water (50 mL) was added while maintaining vigorous stirring. When the amidine precipitated upon addition of water, the solid was filtered off and dissolved in EtOAc (20 mL). The aqueous layer was extracted with EtOAc (3 × 20 mL). The extracts were combined and washed with water (2 × 50 mL). The organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by δ = 7.88-7.86 (m, 2H), 7.47-7.05 (m, 5H), 7.47-7.05 (m, 2H), 4.86 (s, 2H)). The title compound was recrystallized from CH2Cl2 at room temperature to give the desired crystals suitable for single-crystal X-ray diffraction.
(yield: 75%; m.p. 389-391 K; MS (EI, 70V): 322 (M+); 1H NMR (CDCl3, 400 MHz):All H atoms were positioned geometrically and constrained to ride on their parent atoms (N—H = 0.86 Å and Uiso(H) = 1.2Ueq(N); C—H = 0.93 and 0.97 Å for aromatic and methylene H atoms with Uiso(H) = 1.2Ueq(C), respectively.
Data collection: SMART (Bruker, 2004); cell
SMART (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. View of the two symmetry independent molecules of the title compound showing the atom numbering scheme and thermal ellipsoids at the 50% probability level. |
C13H11IN2 | Z = 4 |
Mr = 322.14 | F(000) = 624 |
Triclinic, P1 | Dx = 1.677 Mg m−3 |
Hall symbol: -P 1 | Melting point = 389–391 K |
a = 10.411 (3) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.024 (3) Å | Cell parameters from 5918 reflections |
c = 11.534 (3) Å | θ = 0.0–0.0° |
α = 95.501 (3)° | µ = 2.49 mm−1 |
β = 95.065 (3)° | T = 296 K |
γ = 102.986 (3)° | Block, colourless |
V = 1275.7 (6) Å3 | 0.49 × 0.44 × 0.30 mm |
CCD area-detector diffractometer | 4716 independent reflections |
Radiation source: fine-focus sealed tube | 4076 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.013 |
ϕ and ω scans | θmax = 25.5°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −12→12 |
Tmin = 0.376, Tmax = 0.523 | k = −13→13 |
9707 measured reflections | l = −13→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.079 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0273P)2 + 1.8412P] where P = (Fo2 + 2Fc2)/3 |
4716 reflections | (Δ/σ)max = 0.001 |
289 parameters | Δρmax = 0.94 e Å−3 |
0 restraints | Δρmin = −1.34 e Å−3 |
C13H11IN2 | γ = 102.986 (3)° |
Mr = 322.14 | V = 1275.7 (6) Å3 |
Triclinic, P1 | Z = 4 |
a = 10.411 (3) Å | Mo Kα radiation |
b = 11.024 (3) Å | µ = 2.49 mm−1 |
c = 11.534 (3) Å | T = 296 K |
α = 95.501 (3)° | 0.49 × 0.44 × 0.30 mm |
β = 95.065 (3)° |
CCD area-detector diffractometer | 4716 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 4076 reflections with I > 2σ(I) |
Tmin = 0.376, Tmax = 0.523 | Rint = 0.013 |
9707 measured reflections |
R[F2 > 2σ(F2)] = 0.033 | 0 restraints |
wR(F2) = 0.079 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.94 e Å−3 |
4716 reflections | Δρmin = −1.34 e Å−3 |
289 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.1631 (3) | 0.3372 (3) | 0.1714 (3) | 0.0462 (7) | |
C2 | 0.1131 (3) | 0.2143 (3) | 0.1182 (3) | 0.0409 (7) | |
C3 | 0.0759 (3) | 0.1972 (3) | −0.0023 (3) | 0.0530 (8) | |
H3 | 0.0421 | 0.1164 | −0.0402 | 0.064* | |
C4 | 0.0882 (5) | 0.2975 (4) | −0.0663 (4) | 0.0728 (11) | |
H4 | 0.0639 | 0.2838 | −0.1469 | 0.087* | |
C5 | 0.1365 (5) | 0.4185 (4) | −0.0115 (4) | 0.0751 (12) | |
H5 | 0.1441 | 0.4862 | −0.0549 | 0.090* | |
C6 | 0.1731 (4) | 0.4381 (4) | 0.1069 (4) | 0.0629 (10) | |
H6 | 0.2048 | 0.5194 | 0.1442 | 0.075* | |
C7 | 0.1828 (3) | 0.0559 (3) | 0.2085 (3) | 0.0390 (6) | |
C8 | 0.1576 (3) | −0.0507 (3) | 0.2811 (3) | 0.0397 (6) | |
C9 | 0.0539 (3) | −0.0646 (3) | 0.3501 (3) | 0.0510 (8) | |
H9 | 0.0006 | −0.0073 | 0.3512 | 0.061* | |
C10 | 0.0289 (4) | −0.1629 (4) | 0.4170 (3) | 0.0618 (10) | |
H10 | −0.0416 | −0.1715 | 0.4622 | 0.074* | |
C11 | 0.1071 (4) | −0.2484 (4) | 0.4176 (4) | 0.0633 (10) | |
H11 | 0.0905 | −0.3138 | 0.4636 | 0.076* | |
C12 | 0.2095 (4) | −0.2359 (4) | 0.3499 (4) | 0.0707 (11) | |
H12 | 0.2628 | −0.2933 | 0.3497 | 0.085* | |
C13 | 0.2346 (4) | −0.1383 (4) | 0.2812 (4) | 0.0620 (10) | |
H13 | 0.3039 | −0.1315 | 0.2347 | 0.074* | |
C14 | 0.4353 (3) | 1.2019 (3) | 0.7427 (3) | 0.0515 (8) | |
C15 | 0.4541 (3) | 1.1218 (3) | 0.8267 (3) | 0.0405 (7) | |
C16 | 0.5055 (3) | 1.1761 (3) | 0.9409 (3) | 0.0529 (8) | |
H16 | 0.5201 | 1.1250 | 0.9978 | 0.063* | |
C17 | 0.5348 (4) | 1.3047 (4) | 0.9701 (4) | 0.0737 (12) | |
H17 | 0.5680 | 1.3395 | 1.0466 | 0.088* | |
C18 | 0.5148 (5) | 1.3808 (4) | 0.8862 (5) | 0.0827 (14) | |
H18 | 0.5349 | 1.4673 | 0.9060 | 0.099* | |
C19 | 0.4654 (4) | 1.3303 (4) | 0.7728 (5) | 0.0722 (12) | |
H19 | 0.4522 | 1.3826 | 0.7164 | 0.087* | |
C20 | 0.3135 (3) | 0.9233 (3) | 0.7895 (3) | 0.0398 (7) | |
C21 | 0.2872 (3) | 0.7878 (3) | 0.7459 (3) | 0.0418 (7) | |
C22 | 0.3741 (4) | 0.7450 (4) | 0.6769 (3) | 0.0574 (9) | |
H22 | 0.4484 | 0.8012 | 0.6586 | 0.069* | |
C23 | 0.3509 (4) | 0.6196 (4) | 0.6351 (4) | 0.0738 (12) | |
H23 | 0.4107 | 0.5915 | 0.5900 | 0.089* | |
C24 | 0.2400 (4) | 0.5355 (4) | 0.6594 (4) | 0.0672 (11) | |
H24 | 0.2248 | 0.4511 | 0.6309 | 0.081* | |
C25 | 0.1529 (4) | 0.5765 (4) | 0.7255 (4) | 0.0629 (10) | |
H25 | 0.0772 | 0.5202 | 0.7411 | 0.075* | |
C26 | 0.1762 (4) | 0.7017 (3) | 0.7698 (3) | 0.0550 (8) | |
H26 | 0.1168 | 0.7283 | 0.8162 | 0.066* | |
I1 | 0.22107 (3) | 0.37212 (3) | 0.35229 (2) | 0.07680 (12) | |
I2 | 0.36281 (3) | 1.12543 (3) | 0.56938 (2) | 0.08108 (12) | |
N1 | 0.0885 (2) | 0.1116 (2) | 0.1848 (2) | 0.0423 (6) | |
N2 | 0.3033 (3) | 0.0867 (3) | 0.1700 (3) | 0.0553 (8) | |
H2A | 0.3209 | 0.1467 | 0.1271 | 0.066* | |
H2B | 0.3624 | 0.0464 | 0.1884 | 0.066* | |
N3 | 0.4332 (2) | 0.9910 (2) | 0.7956 (2) | 0.0410 (6) | |
N4 | 0.2101 (3) | 0.9688 (3) | 0.8219 (3) | 0.0557 (7) | |
H4A | 0.2222 | 1.0466 | 0.8482 | 0.067* | |
H4B | 0.1323 | 0.9198 | 0.8161 | 0.067* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0438 (17) | 0.0485 (18) | 0.0445 (17) | 0.0066 (14) | 0.0000 (14) | 0.0103 (14) |
C2 | 0.0277 (14) | 0.0447 (17) | 0.0514 (18) | 0.0095 (12) | 0.0051 (12) | 0.0091 (14) |
C3 | 0.052 (2) | 0.051 (2) | 0.054 (2) | 0.0092 (16) | 0.0055 (16) | 0.0035 (16) |
C4 | 0.087 (3) | 0.081 (3) | 0.046 (2) | 0.011 (2) | −0.002 (2) | 0.016 (2) |
C5 | 0.099 (3) | 0.062 (3) | 0.062 (3) | 0.008 (2) | −0.002 (2) | 0.031 (2) |
C6 | 0.073 (3) | 0.045 (2) | 0.064 (2) | 0.0025 (18) | −0.0007 (19) | 0.0133 (17) |
C7 | 0.0287 (14) | 0.0407 (16) | 0.0466 (17) | 0.0072 (12) | 0.0035 (12) | 0.0039 (13) |
C8 | 0.0328 (15) | 0.0406 (16) | 0.0446 (16) | 0.0085 (12) | 0.0006 (12) | 0.0045 (13) |
C9 | 0.0469 (18) | 0.058 (2) | 0.054 (2) | 0.0196 (16) | 0.0124 (15) | 0.0139 (16) |
C10 | 0.061 (2) | 0.073 (3) | 0.059 (2) | 0.0195 (19) | 0.0191 (18) | 0.0226 (19) |
C11 | 0.065 (2) | 0.056 (2) | 0.070 (2) | 0.0094 (18) | 0.0055 (19) | 0.0256 (19) |
C12 | 0.067 (3) | 0.059 (2) | 0.099 (3) | 0.029 (2) | 0.018 (2) | 0.029 (2) |
C13 | 0.051 (2) | 0.058 (2) | 0.089 (3) | 0.0241 (17) | 0.025 (2) | 0.026 (2) |
C14 | 0.0382 (17) | 0.061 (2) | 0.061 (2) | 0.0172 (15) | 0.0088 (15) | 0.0187 (17) |
C15 | 0.0266 (14) | 0.0473 (17) | 0.0510 (18) | 0.0126 (12) | 0.0080 (12) | 0.0098 (14) |
C16 | 0.0467 (19) | 0.057 (2) | 0.056 (2) | 0.0135 (16) | 0.0076 (15) | 0.0082 (16) |
C17 | 0.072 (3) | 0.064 (3) | 0.079 (3) | 0.013 (2) | 0.006 (2) | −0.011 (2) |
C18 | 0.084 (3) | 0.048 (2) | 0.116 (4) | 0.016 (2) | 0.018 (3) | 0.003 (3) |
C19 | 0.070 (3) | 0.058 (2) | 0.101 (4) | 0.027 (2) | 0.019 (2) | 0.035 (2) |
C20 | 0.0318 (15) | 0.0501 (17) | 0.0403 (16) | 0.0131 (13) | 0.0038 (12) | 0.0112 (13) |
C21 | 0.0349 (15) | 0.0503 (18) | 0.0403 (16) | 0.0104 (13) | 0.0004 (12) | 0.0083 (13) |
C22 | 0.0440 (19) | 0.061 (2) | 0.063 (2) | 0.0069 (16) | 0.0094 (16) | −0.0031 (18) |
C23 | 0.070 (3) | 0.068 (3) | 0.080 (3) | 0.019 (2) | 0.016 (2) | −0.015 (2) |
C24 | 0.078 (3) | 0.051 (2) | 0.066 (2) | 0.012 (2) | −0.006 (2) | −0.0013 (18) |
C25 | 0.065 (2) | 0.052 (2) | 0.068 (2) | 0.0018 (18) | 0.0057 (19) | 0.0139 (18) |
C26 | 0.0496 (19) | 0.055 (2) | 0.062 (2) | 0.0105 (16) | 0.0150 (16) | 0.0140 (17) |
I1 | 0.0951 (2) | 0.07203 (19) | 0.05011 (16) | −0.00014 (15) | −0.01240 (14) | 0.00788 (12) |
I2 | 0.0750 (2) | 0.1171 (3) | 0.05523 (17) | 0.02581 (17) | 0.00003 (13) | 0.02980 (16) |
N1 | 0.0307 (12) | 0.0415 (14) | 0.0573 (16) | 0.0094 (10) | 0.0078 (11) | 0.0137 (12) |
N2 | 0.0334 (14) | 0.0629 (18) | 0.079 (2) | 0.0186 (13) | 0.0168 (13) | 0.0303 (16) |
N3 | 0.0281 (12) | 0.0465 (15) | 0.0505 (15) | 0.0117 (11) | 0.0052 (11) | 0.0094 (12) |
N4 | 0.0317 (14) | 0.0513 (16) | 0.084 (2) | 0.0090 (12) | 0.0151 (14) | 0.0037 (15) |
C1—C6 | 1.386 (5) | C14—I2 | 2.098 (4) |
C1—C2 | 1.396 (5) | C15—C16 | 1.400 (5) |
C1—I1 | 2.094 (3) | C15—N3 | 1.415 (4) |
C2—C3 | 1.392 (5) | C16—C17 | 1.382 (5) |
C2—N1 | 1.417 (4) | C16—H16 | 0.9300 |
C3—C4 | 1.376 (5) | C17—C18 | 1.373 (7) |
C3—H3 | 0.9300 | C17—H17 | 0.9300 |
C4—C5 | 1.383 (6) | C18—C19 | 1.378 (7) |
C4—H4 | 0.9300 | C18—H18 | 0.9300 |
C5—C6 | 1.368 (6) | C19—H19 | 0.9300 |
C5—H5 | 0.9300 | C20—N3 | 1.293 (4) |
C6—H6 | 0.9300 | C20—N4 | 1.352 (4) |
C7—N1 | 1.294 (4) | C20—C21 | 1.485 (4) |
C7—N2 | 1.349 (4) | C21—C22 | 1.387 (5) |
C7—C8 | 1.496 (4) | C21—C26 | 1.388 (5) |
C8—C13 | 1.387 (5) | C22—C23 | 1.381 (6) |
C8—C9 | 1.386 (4) | C22—H22 | 0.9300 |
C9—C10 | 1.381 (5) | C23—C24 | 1.378 (6) |
C9—H9 | 0.9300 | C23—H23 | 0.9300 |
C10—C11 | 1.377 (5) | C24—C25 | 1.360 (6) |
C10—H10 | 0.9300 | C24—H24 | 0.9300 |
C11—C12 | 1.367 (6) | C25—C26 | 1.384 (5) |
C11—H11 | 0.9300 | C25—H25 | 0.9300 |
C12—C13 | 1.389 (5) | C26—H26 | 0.9300 |
C12—H12 | 0.9300 | N2—H2A | 0.8600 |
C13—H13 | 0.9300 | N2—H2B | 0.8600 |
C14—C19 | 1.382 (6) | N4—H4A | 0.8600 |
C14—C15 | 1.401 (5) | N4—H4B | 0.8600 |
C6—C1—C2 | 121.2 (3) | C16—C15—N3 | 120.5 (3) |
C6—C1—I1 | 118.7 (3) | C14—C15—N3 | 121.4 (3) |
C2—C1—I1 | 120.1 (2) | C17—C16—C15 | 120.9 (4) |
C3—C2—C1 | 117.4 (3) | C17—C16—H16 | 119.5 |
C3—C2—N1 | 120.7 (3) | C15—C16—H16 | 119.5 |
C1—C2—N1 | 121.7 (3) | C18—C17—C16 | 119.8 (4) |
C4—C3—C2 | 121.2 (3) | C18—C17—H17 | 120.1 |
C4—C3—H3 | 119.4 | C16—C17—H17 | 120.1 |
C2—C3—H3 | 119.4 | C17—C18—C19 | 120.6 (4) |
C3—C4—C5 | 120.4 (4) | C17—C18—H18 | 119.7 |
C3—C4—H4 | 119.8 | C19—C18—H18 | 119.7 |
C5—C4—H4 | 119.8 | C18—C19—C14 | 120.0 (4) |
C6—C5—C4 | 119.6 (4) | C18—C19—H19 | 120.0 |
C6—C5—H5 | 120.2 | C14—C19—H19 | 120.0 |
C4—C5—H5 | 120.2 | N3—C20—N4 | 123.5 (3) |
C5—C6—C1 | 120.2 (4) | N3—C20—C21 | 118.8 (3) |
C5—C6—H6 | 119.9 | N4—C20—C21 | 117.7 (3) |
C1—C6—H6 | 119.9 | C22—C21—C26 | 118.2 (3) |
N1—C7—N2 | 123.9 (3) | C22—C21—C20 | 119.5 (3) |
N1—C7—C8 | 118.7 (3) | C26—C21—C20 | 122.2 (3) |
N2—C7—C8 | 117.4 (3) | C23—C22—C21 | 120.4 (4) |
C13—C8—C9 | 118.1 (3) | C23—C22—H22 | 119.8 |
C13—C8—C7 | 121.9 (3) | C21—C22—H22 | 119.8 |
C9—C8—C7 | 120.0 (3) | C24—C23—C22 | 120.6 (4) |
C10—C9—C8 | 120.7 (3) | C24—C23—H23 | 119.7 |
C10—C9—H9 | 119.7 | C22—C23—H23 | 119.7 |
C8—C9—H9 | 119.7 | C25—C24—C23 | 119.6 (4) |
C11—C10—C9 | 120.7 (3) | C25—C24—H24 | 120.2 |
C11—C10—H10 | 119.6 | C23—C24—H24 | 120.2 |
C9—C10—H10 | 119.6 | C24—C25—C26 | 120.4 (4) |
C12—C11—C10 | 119.2 (4) | C24—C25—H25 | 119.8 |
C12—C11—H11 | 120.4 | C26—C25—H25 | 119.8 |
C10—C11—H11 | 120.4 | C25—C26—C21 | 120.8 (3) |
C11—C12—C13 | 120.5 (4) | C25—C26—H26 | 119.6 |
C11—C12—H12 | 119.8 | C21—C26—H26 | 119.6 |
C13—C12—H12 | 119.8 | C7—N1—C2 | 118.8 (2) |
C8—C13—C12 | 120.8 (3) | C7—N2—H2A | 120.0 |
C8—C13—H13 | 119.6 | C7—N2—H2B | 120.0 |
C12—C13—H13 | 119.6 | H2A—N2—H2B | 120.0 |
C19—C14—C15 | 120.7 (4) | C20—N3—C15 | 117.9 (2) |
C19—C14—I2 | 119.9 (3) | C20—N4—H4A | 120.0 |
C15—C14—I2 | 119.4 (3) | C20—N4—H4B | 120.0 |
C16—C15—C14 | 118.0 (3) | H4A—N4—H4B | 120.0 |
C6—C1—C2—C3 | 1.1 (5) | C14—C15—C16—C17 | 1.0 (5) |
I1—C1—C2—C3 | 179.8 (2) | N3—C15—C16—C17 | 175.5 (3) |
C6—C1—C2—N1 | −172.8 (3) | C15—C16—C17—C18 | −0.7 (6) |
I1—C1—C2—N1 | 5.9 (4) | C16—C17—C18—C19 | 0.2 (7) |
C1—C2—C3—C4 | 0.1 (5) | C17—C18—C19—C14 | 0.1 (7) |
N1—C2—C3—C4 | 174.0 (3) | C15—C14—C19—C18 | 0.2 (6) |
C2—C3—C4—C5 | −0.9 (6) | I2—C14—C19—C18 | −179.0 (3) |
C3—C4—C5—C6 | 0.5 (7) | N3—C20—C21—C22 | −22.0 (4) |
C4—C5—C6—C1 | 0.7 (7) | N4—C20—C21—C22 | 158.7 (3) |
C2—C1—C6—C5 | −1.5 (6) | N3—C20—C21—C26 | 159.4 (3) |
I1—C1—C6—C5 | 179.8 (3) | N4—C20—C21—C26 | −20.0 (5) |
N1—C7—C8—C13 | 160.1 (3) | C26—C21—C22—C23 | −1.0 (5) |
N2—C7—C8—C13 | −19.0 (5) | C20—C21—C22—C23 | −179.7 (4) |
N1—C7—C8—C9 | −19.3 (4) | C21—C22—C23—C24 | 1.2 (7) |
N2—C7—C8—C9 | 161.7 (3) | C22—C23—C24—C25 | −0.2 (7) |
C13—C8—C9—C10 | 0.2 (5) | C23—C24—C25—C26 | −1.0 (6) |
C7—C8—C9—C10 | 179.6 (3) | C24—C25—C26—C21 | 1.3 (6) |
C8—C9—C10—C11 | 0.6 (6) | C22—C21—C26—C25 | −0.2 (5) |
C9—C10—C11—C12 | −0.8 (6) | C20—C21—C26—C25 | 178.4 (3) |
C10—C11—C12—C13 | 0.0 (7) | N2—C7—N1—C2 | −2.4 (5) |
C9—C8—C13—C12 | −1.0 (6) | C8—C7—N1—C2 | 178.6 (3) |
C7—C8—C13—C12 | 179.7 (4) | C3—C2—N1—C7 | 96.8 (4) |
C11—C12—C13—C8 | 0.9 (7) | C1—C2—N1—C7 | −89.5 (4) |
C19—C14—C15—C16 | −0.7 (5) | N4—C20—N3—C15 | −6.6 (5) |
I2—C14—C15—C16 | 178.6 (2) | C21—C20—N3—C15 | 174.1 (3) |
C19—C14—C15—N3 | −175.2 (3) | C16—C15—N3—C20 | 101.4 (3) |
I2—C14—C15—N3 | 4.0 (4) | C14—C15—N3—C20 | −84.2 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2B···N3i | 0.86 | 2.25 | 3.057 (4) | 156 |
N4—H4B···N1ii | 0.86 | 2.24 | 3.027 (4) | 151 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C13H11IN2 |
Mr | 322.14 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 10.411 (3), 11.024 (3), 11.534 (3) |
α, β, γ (°) | 95.501 (3), 95.065 (3), 102.986 (3) |
V (Å3) | 1275.7 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 2.49 |
Crystal size (mm) | 0.49 × 0.44 × 0.30 |
Data collection | |
Diffractometer | CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.376, 0.523 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9707, 4716, 4076 |
Rint | 0.013 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.033, 0.079, 1.04 |
No. of reflections | 4716 |
No. of parameters | 289 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.94, −1.34 |
Computer programs: SMART (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2B···N3i | 0.86 | 2.25 | 3.057 (4) | 156.0 |
N4—H4B···N1ii | 0.86 | 2.24 | 3.027 (4) | 151.3 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y+1, −z+1. |
Acknowledgements
The authors are grateful for the financial support of the Science and Technology Department of Zhejiang Province Foundation of China (project No. 2010 C32022) and the Zhejiang Province Natural Science Foundation of China (project No. Y4090410).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Benzamidines and their derivatives have attracted our attention because of their application in the synthesis of heterocyclic compounds (Attanasi et al. 2010, Bhosale et al. 2010, Deng & Mani et al. 20109, Wang et al. 2011, Ohta et al. 2010). We report here the crystal structure of the title compound (Fig. 1).
The asymmetric unit of the title compound contains two crystallographically independent molecules (A and B). Concerning the carbon atoms, molecule A is made up from C1 to C13 and molecule B is made up from C14 to C26. In both molecules the bond lengths and angles are generally within normal ranges. The bond lengths N1-C7 (1.293 (4) Å) and N3-C20 (1.293 (3) Å) displays double bond character, while the distances N2-C20 1.350 (5) Å and N4-C20 1.352 (5) Å are indicative of C–N single bonds. The two molecules are not parallel so that torsion angles of 8.6 (1)° between the two iodo-phenyl groups and 44.5 (2)° between both phenyl substituents, respectively, are observed. In molecule A, the planar benzene ring (C8-C13) and the iodine-substituted benzene ring (C1-C6) form a dihedral angle of 73.3 (2)°. The NH2 group is twisted away from the plane of the adjacent benzene ring with a dihedral angle between the N-C bond of the NH2 group and the plane of the adjacent phenyl ring of 18.5 (1)°. The amidine plane and both benzene rings are not coplanar showing dihedral angles of the amidine plane (N1/C7/N2) with respect to the iodine-substituted benzene ring (C1-C6) and the second benzene ring (C8-C13) of 88.2 (2)° and 51.0 (1)°, respectively. In molecule B, the planar benzene ring (C21-C26) and the iodine-substituted benzene ring (C14-C19) form a dihedral angle of 74.4 (1)°. The NH2 group also is twisted away from the plane of the adjacent benzene ring with a dihedral angle between the N-C bond of the NH2 group and the plane of the adjacent phenyl ring of 20.7 (2)°. The amidine plane in molecule B and both benzene rings are not coplanar showing dihedral angles of the amidine plane (N3/C20/N4) with respect to the iodine-substituted benzene ring (C14-C19) and the second benzene ring (C21-C26) of 95.1 (3)° and 20.7 (2)°, respectively. In the crystal structure intramolecular N—H···N (N2—H2B···N3 and N4—H4B···N1) hydrogen bonds exist (Table 1).