metal-organic compounds
Bis[N-(2-hydroxyethyl)-N-methyldithiocarbamato-κS][2,4,6-tris(pyridin-2-yl)-1,3,5-triazine-κ3N1,N2,N6]zinc dioxane sesquisolvate
aDepartment of Chemistry, The University of Texas at San Antonio, One UTSA Circle, San Antonio, Texas 78249-0698, USA, bChemical Abstracts Service, 2540 Olentangy River Road, Columbus, Ohio 43202, USA, and cDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
The 4H8NOS2)2(C18H12N6)]·1.5C4H8O2, comprises a Zn-containing molecule and one and a half dioxane molecules as one of the solvent molecules is located about a crystallographic inversion centre. The approximately square-pyramidal N3S2 donor set is defined by two monodentate dithiocarbamate ligands and two pyridine and one triazine N atom from the tridentate triazine ligand. Molecules are connected into a supramolecular array via O—H⋯S and O—H⋯N hydrogen bonds. These stack along the b axis and the solvent molecules reside in the channels thus formed.
of the title compound, [Zn(CRelated literature
For background on structural studies on hydroxyl-substituted dithiocarbamate ligands, see: Benson et al. (2007); Poplaukhin & Tiekink (2010). For the coordination modes of triazine molecules, see: Therrin (2011). For additional structural analysis, see: Addison et al. (1984); Spek (2009).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S160053681200671X/lh5418sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681200671X/lh5418Isup2.hkl
The title compound was prepared by dissolving zinc(II) bis[N-(2-hydroxyethyl)-N-methyldithiocarbamato-κS]zinc(II) (Benson et al., 2007; 0.5 mmol, 184 mg) and 2,4,6-tris(pyridin-2-yl)-1,3,5-triazine (0.5 mmol, 160 mg) into a methanol/ethanol solution. The solution made an abrupt colour change from yellow to red. Suitable X-ray quality crystals were grown by liquid diffusion of dioxane into the methanol/ethanol solution.
C-bound H-atoms were placed in calculated positions (C—H 0.95–0.99 Å) and were included in the
in the riding model approximation with Uiso(H) set to 1.2–1.5Ueq(C). The O-bound H-atoms were located in a difference Fourier map and refined with an O—H restraint of 0.84±0.01 Å, and with Uiso(H) = 1.5Ueq(O). The maximum and minimum residual electron density peaks of 1.54 and 1.08 e Å-3, respectively, were located 0.92 Å and 0.96 Å from the Zn atom.Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); cell
CrystalClear (Molecular Structure Corporation & Rigaku, 2005); data reduction: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).[Zn(C4H8NOS2)2(C18H12N6)]·1.5C4H8O2 | Z = 2 |
Mr = 810.33 | F(000) = 844 |
Triclinic, P1 | Dx = 1.502 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71069 Å |
a = 11.863 (10) Å | Cell parameters from 7249 reflections |
b = 13.019 (11) Å | θ = 2.1–40.5° |
c = 13.199 (11) Å | µ = 0.97 mm−1 |
α = 107.214 (12)° | T = 98 K |
β = 105.780 (15)° | Prism, red |
γ = 100.892 (11)° | 0.40 × 0.30 × 0.05 mm |
V = 1792 (3) Å3 |
Rigaku AFC12/SATURN724 diffractometer | 6940 independent reflections |
Radiation source: fine-focus sealed tube | 5803 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.067 |
ω scans | θmax = 26.0°, θmin = 2.1° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −13→14 |
Tmin = 0.539, Tmax = 1 | k = −16→15 |
11537 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.085 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.222 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.12 | w = 1/[σ2(Fo2) + (0.1081P)2 + 2.961P] where P = (Fo2 + 2Fc2)/3 |
6940 reflections | (Δ/σ)max < 0.001 |
459 parameters | Δρmax = 1.54 e Å−3 |
2 restraints | Δρmin = −1.08 e Å−3 |
[Zn(C4H8NOS2)2(C18H12N6)]·1.5C4H8O2 | γ = 100.892 (11)° |
Mr = 810.33 | V = 1792 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 11.863 (10) Å | Mo Kα radiation |
b = 13.019 (11) Å | µ = 0.97 mm−1 |
c = 13.199 (11) Å | T = 98 K |
α = 107.214 (12)° | 0.40 × 0.30 × 0.05 mm |
β = 105.780 (15)° |
Rigaku AFC12/SATURN724 diffractometer | 6940 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 5803 reflections with I > 2σ(I) |
Tmin = 0.539, Tmax = 1 | Rint = 0.067 |
11537 measured reflections |
R[F2 > 2σ(F2)] = 0.085 | 2 restraints |
wR(F2) = 0.222 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.12 | Δρmax = 1.54 e Å−3 |
6940 reflections | Δρmin = −1.08 e Å−3 |
459 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn | 0.32652 (5) | 0.25219 (5) | 0.17902 (5) | 0.0214 (2) | |
S1 | 0.11993 (12) | 0.16780 (12) | 0.14083 (11) | 0.0249 (3) | |
S2 | 0.25672 (12) | 0.18343 (12) | 0.37341 (12) | 0.0258 (3) | |
S3 | 0.30899 (11) | 0.26302 (11) | −0.00035 (11) | 0.0235 (3) | |
S4 | 0.58474 (12) | 0.35416 (12) | 0.10628 (11) | 0.0255 (3) | |
O1 | −0.1375 (4) | 0.1443 (4) | 0.3793 (4) | 0.0365 (10) | |
H1O | −0.154 (7) | 0.203 (4) | 0.409 (6) | 0.055* | |
O2 | 0.2186 (4) | 0.2066 (5) | −0.3764 (4) | 0.0436 (11) | |
H2O | 0.243 (8) | 0.229 (7) | −0.422 (6) | 0.065* | |
N1 | 0.0198 (4) | 0.0710 (4) | 0.2576 (4) | 0.0227 (9) | |
N2 | 0.4548 (4) | 0.3517 (4) | −0.0923 (4) | 0.0235 (9) | |
N3 | 0.4988 (4) | 0.3147 (4) | 0.3053 (4) | 0.0217 (9) | |
N4 | 0.6911 (4) | 0.2907 (4) | 0.3819 (4) | 0.0232 (9) | |
N5 | 0.6605 (4) | 0.4724 (4) | 0.4388 (4) | 0.0223 (9) | |
N6 | 0.4064 (4) | 0.1104 (4) | 0.1621 (4) | 0.0222 (9) | |
N7 | 0.3506 (4) | 0.4350 (4) | 0.2704 (4) | 0.0206 (9) | |
N8 | 0.9181 (4) | 0.3772 (4) | 0.5458 (4) | 0.0273 (10) | |
C1 | 0.1241 (5) | 0.1345 (4) | 0.2602 (4) | 0.0227 (11) | |
C2 | −0.0933 (5) | 0.0332 (5) | 0.1600 (5) | 0.0298 (12) | |
H2A | −0.0774 | −0.0020 | 0.0907 | 0.045* | |
H2B | −0.1225 | 0.0978 | 0.1555 | 0.045* | |
H2C | −0.1557 | −0.0216 | 0.1683 | 0.045* | |
C3 | 0.0098 (5) | 0.0464 (4) | 0.3564 (5) | 0.0243 (11) | |
H3A | 0.0884 | 0.0376 | 0.3975 | 0.029* | |
H3B | −0.0544 | −0.0260 | 0.3305 | 0.029* | |
C4 | −0.0215 (5) | 0.1375 (5) | 0.4374 (5) | 0.0286 (12) | |
H4A | −0.0237 | 0.1186 | 0.5043 | 0.034* | |
H4B | 0.0414 | 0.2107 | 0.4636 | 0.034* | |
C5 | 0.4525 (5) | 0.3262 (4) | −0.0006 (5) | 0.0242 (11) | |
C6 | 0.5716 (5) | 0.4002 (5) | −0.1017 (5) | 0.0278 (12) | |
H6A | 0.6225 | 0.4632 | −0.0311 | 0.042* | |
H6B | 0.5564 | 0.4271 | −0.1646 | 0.042* | |
H6C | 0.6141 | 0.3427 | −0.1155 | 0.042* | |
C7 | 0.3460 (5) | 0.3288 (5) | −0.1898 (5) | 0.0259 (11) | |
H7A | 0.3554 | 0.3924 | −0.2164 | 0.031* | |
H7B | 0.2737 | 0.3241 | −0.1658 | 0.031* | |
C8 | 0.3233 (5) | 0.2221 (5) | −0.2863 (5) | 0.0319 (13) | |
H8A | 0.3949 | 0.2260 | −0.3114 | 0.038* | |
H8B | 0.3119 | 0.1576 | −0.2612 | 0.038* | |
C9 | 0.5757 (5) | 0.2521 (4) | 0.3114 (4) | 0.0214 (10) | |
C10 | 0.7283 (5) | 0.4012 (4) | 0.4461 (4) | 0.0226 (11) | |
C11 | 0.5469 (5) | 0.4246 (4) | 0.3676 (4) | 0.0203 (10) | |
C12 | 0.5231 (5) | 0.1356 (4) | 0.2277 (4) | 0.0207 (10) | |
C13 | 0.3513 (5) | 0.0074 (4) | 0.0824 (4) | 0.0240 (11) | |
H13 | 0.2675 | −0.0110 | 0.0376 | 0.029* | |
C14 | 0.4121 (5) | −0.0733 (5) | 0.0630 (5) | 0.0306 (12) | |
H14 | 0.3713 | −0.1455 | 0.0052 | 0.037* | |
C15 | 0.5332 (5) | −0.0466 (5) | 0.1295 (5) | 0.0299 (12) | |
H15 | 0.5773 | −0.1001 | 0.1168 | 0.036* | |
C16 | 0.5909 (5) | 0.0594 (5) | 0.2156 (5) | 0.0266 (11) | |
H16 | 0.6734 | 0.0787 | 0.2641 | 0.032* | |
C17 | 0.4612 (5) | 0.4928 (4) | 0.3488 (4) | 0.0208 (10) | |
C18 | 0.2691 (5) | 0.4911 (5) | 0.2475 (5) | 0.0244 (11) | |
H18 | 0.1908 | 0.4512 | 0.1907 | 0.029* | |
C19 | 0.2962 (5) | 0.6065 (5) | 0.3048 (5) | 0.0263 (11) | |
H19 | 0.2370 | 0.6444 | 0.2871 | 0.032* | |
C20 | 0.4107 (5) | 0.6656 (5) | 0.3879 (5) | 0.0274 (12) | |
H20 | 0.4301 | 0.7439 | 0.4293 | 0.033* | |
C21 | 0.4961 (5) | 0.6073 (5) | 0.4091 (5) | 0.0257 (11) | |
H21 | 0.5761 | 0.6452 | 0.4635 | 0.031* | |
C22 | 0.8523 (5) | 0.4487 (5) | 0.5334 (5) | 0.0252 (11) | |
C23 | 1.0287 (5) | 0.4190 (5) | 0.6270 (5) | 0.0311 (13) | |
H23 | 1.0770 | 0.3695 | 0.6352 | 0.037* | |
C24 | 1.0766 (5) | 0.5305 (5) | 0.6997 (5) | 0.0313 (13) | |
H24 | 1.1547 | 0.5561 | 0.7577 | 0.038* | |
C25 | 1.0089 (5) | 0.6035 (6) | 0.6864 (6) | 0.0361 (14) | |
H25 | 1.0403 | 0.6807 | 0.7344 | 0.043* | |
C26 | 0.8950 (5) | 0.5636 (5) | 0.6028 (5) | 0.0277 (12) | |
H26 | 0.8464 | 0.6124 | 0.5921 | 0.033* | |
O3 | −0.0197 (4) | 0.6269 (4) | −0.0009 (4) | 0.0421 (11) | |
O4 | 0.1276 (4) | 0.7852 (4) | 0.2186 (4) | 0.0417 (11) | |
C27 | 0.1087 (7) | 0.6711 (7) | 0.0298 (7) | 0.055 (2) | |
H27A | 0.1282 | 0.6750 | −0.0375 | 0.066* | |
H27B | 0.1504 | 0.6206 | 0.0578 | 0.066* | |
C28 | 0.1554 (8) | 0.7883 (7) | 0.1218 (7) | 0.058 (2) | |
H28A | 0.2452 | 0.8175 | 0.1427 | 0.070* | |
H28B | 0.1170 | 0.8398 | 0.0925 | 0.070* | |
C29 | −0.0024 (6) | 0.7421 (6) | 0.1860 (6) | 0.0411 (15) | |
H29A | −0.0424 | 0.7930 | 0.1571 | 0.049* | |
H29B | −0.0235 | 0.7391 | 0.2528 | 0.049* | |
C30 | −0.0481 (6) | 0.6276 (6) | 0.0968 (6) | 0.0377 (14) | |
H30A | −0.0111 | 0.5762 | 0.1275 | 0.045* | |
H30B | −0.1381 | 0.5994 | 0.0755 | 0.045* | |
O5 | 0.5355 (5) | 0.0717 (4) | 0.4454 (4) | 0.0447 (11) | |
C31 | 0.6229 (6) | 0.0446 (6) | 0.5217 (6) | 0.0406 (15) | |
H31A | 0.6998 | 0.1075 | 0.5588 | 0.049* | |
H31B | 0.6414 | −0.0231 | 0.4798 | 0.049* | |
C32 | 0.4249 (6) | −0.0228 (6) | 0.3903 (6) | 0.0392 (15) | |
H32A | 0.4432 | −0.0904 | 0.3480 | 0.047* | |
H32B | 0.3624 | −0.0058 | 0.3360 | 0.047* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn | 0.0220 (3) | 0.0205 (3) | 0.0169 (3) | 0.0061 (2) | 0.0055 (2) | 0.0016 (2) |
S1 | 0.0243 (6) | 0.0279 (7) | 0.0193 (7) | 0.0064 (5) | 0.0074 (5) | 0.0052 (5) |
S2 | 0.0231 (6) | 0.0283 (7) | 0.0184 (7) | 0.0056 (5) | 0.0034 (5) | 0.0026 (5) |
S3 | 0.0229 (6) | 0.0249 (6) | 0.0196 (7) | 0.0050 (5) | 0.0074 (5) | 0.0048 (5) |
S4 | 0.0253 (6) | 0.0282 (7) | 0.0194 (7) | 0.0069 (5) | 0.0069 (5) | 0.0051 (6) |
O1 | 0.031 (2) | 0.042 (2) | 0.027 (2) | 0.0203 (19) | 0.0060 (18) | −0.0025 (19) |
O2 | 0.036 (2) | 0.065 (3) | 0.025 (2) | 0.015 (2) | 0.0059 (19) | 0.013 (2) |
N1 | 0.023 (2) | 0.022 (2) | 0.019 (2) | 0.0065 (17) | 0.0078 (18) | 0.0016 (18) |
N2 | 0.028 (2) | 0.026 (2) | 0.015 (2) | 0.0092 (19) | 0.0071 (18) | 0.0063 (19) |
N3 | 0.024 (2) | 0.018 (2) | 0.020 (2) | 0.0056 (17) | 0.0103 (18) | 0.0004 (18) |
N4 | 0.026 (2) | 0.025 (2) | 0.017 (2) | 0.0108 (18) | 0.0096 (18) | 0.0023 (19) |
N5 | 0.023 (2) | 0.021 (2) | 0.022 (2) | 0.0050 (18) | 0.0103 (18) | 0.0042 (18) |
N6 | 0.028 (2) | 0.025 (2) | 0.015 (2) | 0.0104 (18) | 0.0086 (18) | 0.0084 (18) |
N7 | 0.024 (2) | 0.021 (2) | 0.017 (2) | 0.0063 (17) | 0.0095 (17) | 0.0036 (18) |
N8 | 0.027 (2) | 0.034 (3) | 0.018 (2) | 0.010 (2) | 0.0082 (19) | 0.005 (2) |
C1 | 0.026 (2) | 0.020 (2) | 0.019 (3) | 0.014 (2) | 0.007 (2) | −0.002 (2) |
C2 | 0.026 (3) | 0.035 (3) | 0.019 (3) | 0.005 (2) | 0.005 (2) | 0.001 (2) |
C3 | 0.027 (3) | 0.025 (3) | 0.024 (3) | 0.011 (2) | 0.013 (2) | 0.008 (2) |
C4 | 0.029 (3) | 0.032 (3) | 0.020 (3) | 0.011 (2) | 0.006 (2) | 0.004 (2) |
C5 | 0.031 (3) | 0.019 (2) | 0.020 (3) | 0.010 (2) | 0.011 (2) | 0.000 (2) |
C6 | 0.023 (3) | 0.036 (3) | 0.025 (3) | 0.007 (2) | 0.011 (2) | 0.011 (3) |
C7 | 0.026 (3) | 0.034 (3) | 0.020 (3) | 0.010 (2) | 0.010 (2) | 0.011 (2) |
C8 | 0.037 (3) | 0.037 (3) | 0.022 (3) | 0.016 (3) | 0.009 (2) | 0.009 (3) |
C9 | 0.024 (2) | 0.024 (3) | 0.012 (2) | 0.007 (2) | 0.006 (2) | 0.002 (2) |
C10 | 0.023 (2) | 0.025 (3) | 0.017 (3) | 0.005 (2) | 0.011 (2) | 0.001 (2) |
C11 | 0.024 (2) | 0.019 (2) | 0.016 (3) | 0.005 (2) | 0.010 (2) | 0.001 (2) |
C12 | 0.026 (2) | 0.021 (2) | 0.013 (2) | 0.010 (2) | 0.008 (2) | 0.002 (2) |
C13 | 0.025 (2) | 0.023 (3) | 0.017 (3) | 0.006 (2) | 0.005 (2) | 0.000 (2) |
C14 | 0.041 (3) | 0.024 (3) | 0.027 (3) | 0.013 (2) | 0.013 (3) | 0.007 (2) |
C15 | 0.039 (3) | 0.026 (3) | 0.027 (3) | 0.016 (2) | 0.015 (3) | 0.006 (2) |
C16 | 0.032 (3) | 0.024 (3) | 0.020 (3) | 0.010 (2) | 0.006 (2) | 0.002 (2) |
C17 | 0.027 (3) | 0.016 (2) | 0.020 (3) | 0.009 (2) | 0.012 (2) | 0.005 (2) |
C18 | 0.027 (3) | 0.024 (3) | 0.022 (3) | 0.010 (2) | 0.012 (2) | 0.004 (2) |
C19 | 0.029 (3) | 0.028 (3) | 0.028 (3) | 0.014 (2) | 0.017 (2) | 0.010 (2) |
C20 | 0.034 (3) | 0.025 (3) | 0.026 (3) | 0.010 (2) | 0.016 (2) | 0.008 (2) |
C21 | 0.025 (3) | 0.024 (3) | 0.022 (3) | 0.003 (2) | 0.007 (2) | 0.004 (2) |
C22 | 0.025 (3) | 0.029 (3) | 0.022 (3) | 0.007 (2) | 0.010 (2) | 0.009 (2) |
C23 | 0.028 (3) | 0.042 (3) | 0.026 (3) | 0.015 (3) | 0.014 (2) | 0.010 (3) |
C24 | 0.020 (2) | 0.045 (3) | 0.017 (3) | 0.004 (2) | 0.001 (2) | 0.004 (3) |
C25 | 0.034 (3) | 0.036 (3) | 0.031 (3) | 0.004 (3) | 0.011 (3) | 0.006 (3) |
C26 | 0.029 (3) | 0.029 (3) | 0.020 (3) | 0.006 (2) | 0.009 (2) | 0.005 (2) |
O3 | 0.036 (2) | 0.049 (3) | 0.027 (2) | 0.007 (2) | 0.0007 (19) | 0.007 (2) |
O4 | 0.041 (2) | 0.047 (3) | 0.032 (3) | 0.011 (2) | 0.009 (2) | 0.012 (2) |
C27 | 0.050 (4) | 0.069 (5) | 0.041 (4) | 0.001 (4) | 0.022 (4) | 0.016 (4) |
C28 | 0.056 (5) | 0.064 (5) | 0.042 (4) | −0.005 (4) | 0.017 (4) | 0.017 (4) |
C29 | 0.038 (3) | 0.041 (4) | 0.047 (4) | 0.019 (3) | 0.018 (3) | 0.013 (3) |
C30 | 0.036 (3) | 0.038 (3) | 0.043 (4) | 0.017 (3) | 0.015 (3) | 0.013 (3) |
O5 | 0.059 (3) | 0.037 (2) | 0.032 (3) | 0.011 (2) | 0.012 (2) | 0.009 (2) |
C31 | 0.037 (3) | 0.038 (3) | 0.042 (4) | 0.014 (3) | 0.010 (3) | 0.010 (3) |
C32 | 0.045 (4) | 0.035 (3) | 0.026 (3) | 0.016 (3) | 0.002 (3) | 0.004 (3) |
Zn—S1 | 2.335 (2) | C10—C22 | 1.478 (7) |
Zn—S3 | 2.368 (2) | C11—C17 | 1.490 (7) |
Zn—N3 | 2.082 (5) | C12—C16 | 1.390 (7) |
Zn—N6 | 2.211 (5) | C13—C14 | 1.385 (8) |
Zn—N7 | 2.249 (5) | C13—H13 | 0.9500 |
S1—C1 | 1.744 (6) | C14—C15 | 1.378 (8) |
S2—C1 | 1.701 (5) | C14—H14 | 0.9500 |
S3—C5 | 1.746 (6) | C15—C16 | 1.399 (8) |
S4—C5 | 1.692 (6) | C15—H15 | 0.9500 |
O1—C4 | 1.415 (7) | C16—H16 | 0.9500 |
O1—H1O | 0.840 (10) | C17—C21 | 1.382 (7) |
O2—C8 | 1.399 (7) | C18—C19 | 1.394 (8) |
O2—H2O | 0.840 (10) | C18—H18 | 0.9500 |
N1—C1 | 1.338 (7) | C19—C20 | 1.391 (8) |
N1—C2 | 1.461 (7) | C19—H19 | 0.9500 |
N1—C3 | 1.461 (7) | C20—C21 | 1.394 (8) |
N2—C5 | 1.352 (7) | C20—H20 | 0.9500 |
N2—C7 | 1.461 (7) | C21—H21 | 0.9500 |
N2—C6 | 1.464 (7) | C22—C26 | 1.407 (8) |
N3—C11 | 1.337 (7) | C23—C24 | 1.386 (9) |
N3—C9 | 1.335 (7) | C23—H23 | 0.9500 |
N4—C9 | 1.327 (7) | C24—C25 | 1.374 (9) |
N4—C10 | 1.348 (7) | C24—H24 | 0.9500 |
N5—C11 | 1.317 (7) | C25—C26 | 1.378 (8) |
N5—C10 | 1.345 (7) | C25—H25 | 0.9500 |
N6—C12 | 1.335 (7) | C26—H26 | 0.9500 |
N6—C13 | 1.339 (7) | O3—C27 | 1.417 (8) |
N7—C17 | 1.336 (7) | O3—C30 | 1.417 (8) |
N7—C18 | 1.341 (7) | O4—C28 | 1.413 (9) |
N8—C23 | 1.336 (7) | O4—C29 | 1.431 (8) |
N8—C22 | 1.342 (7) | C27—C28 | 1.525 (11) |
C2—H2A | 0.9800 | C27—H27A | 0.9900 |
C2—H2B | 0.9800 | C27—H27B | 0.9900 |
C2—H2C | 0.9800 | C28—H28A | 0.9900 |
C3—C4 | 1.523 (7) | C28—H28B | 0.9900 |
C3—H3A | 0.9900 | C29—C30 | 1.487 (9) |
C3—H3B | 0.9900 | C29—H29A | 0.9900 |
C4—H4A | 0.9900 | C29—H29B | 0.9900 |
C4—H4B | 0.9900 | C30—H30A | 0.9900 |
C6—H6A | 0.9800 | C30—H30B | 0.9900 |
C6—H6B | 0.9800 | O5—C31 | 1.413 (8) |
C6—H6C | 0.9800 | O5—C32 | 1.451 (8) |
C7—C8 | 1.500 (8) | C31—C32i | 1.498 (10) |
C7—H7A | 0.9900 | C31—H31A | 0.9900 |
C7—H7B | 0.9900 | C31—H31B | 0.9900 |
C8—H8A | 0.9900 | C32—C31i | 1.498 (10) |
C8—H8B | 0.9900 | C32—H32A | 0.9900 |
C9—C12 | 1.479 (7) | C32—H32B | 0.9900 |
N3—Zn—N6 | 73.74 (17) | N6—C12—C9 | 114.7 (4) |
N3—Zn—N7 | 73.82 (16) | C16—C12—C9 | 122.7 (5) |
N6—Zn—N7 | 147.55 (17) | N6—C13—C14 | 122.3 (5) |
N3—Zn—S1 | 143.15 (13) | N6—C13—H13 | 118.8 |
N6—Zn—S1 | 103.52 (13) | C14—C13—H13 | 118.8 |
N7—Zn—S1 | 102.90 (12) | C15—C14—C13 | 118.5 (5) |
N3—Zn—S3 | 118.69 (13) | C15—C14—H14 | 120.7 |
N6—Zn—S3 | 97.83 (12) | C13—C14—H14 | 120.7 |
N7—Zn—S3 | 96.73 (12) | C14—C15—C16 | 119.8 (5) |
S1—Zn—S3 | 98.16 (5) | C14—C15—H15 | 120.1 |
C1—S1—Zn | 102.41 (18) | C16—C15—H15 | 120.1 |
C5—S3—Zn | 110.22 (19) | C12—C16—C15 | 117.6 (5) |
C4—O1—H1O | 116 (6) | C12—C16—H16 | 121.2 |
C8—O2—H2O | 106 (6) | C15—C16—H16 | 121.2 |
C1—N1—C2 | 121.4 (5) | N7—C17—C21 | 123.8 (5) |
C1—N1—C3 | 121.7 (4) | N7—C17—C11 | 114.9 (4) |
C2—N1—C3 | 116.5 (4) | C21—C17—C11 | 121.3 (5) |
C5—N2—C7 | 124.2 (4) | N7—C18—C19 | 121.7 (5) |
C5—N2—C6 | 120.4 (4) | N7—C18—H18 | 119.1 |
C7—N2—C6 | 115.3 (4) | C19—C18—H18 | 119.1 |
C11—N3—C9 | 116.3 (4) | C20—C19—C18 | 119.5 (5) |
C11—N3—Zn | 121.2 (4) | C20—C19—H19 | 120.2 |
C9—N3—Zn | 121.1 (3) | C18—C19—H19 | 120.2 |
C9—N4—C10 | 114.9 (4) | C19—C20—C21 | 118.4 (5) |
C11—N5—C10 | 114.6 (4) | C19—C20—H20 | 120.8 |
C12—N6—C13 | 119.1 (5) | C21—C20—H20 | 120.8 |
C12—N6—Zn | 116.0 (3) | C17—C21—C20 | 118.2 (5) |
C13—N6—Zn | 124.4 (4) | C17—C21—H21 | 120.9 |
C17—N7—C18 | 118.3 (4) | C20—C21—H21 | 120.9 |
C17—N7—Zn | 115.2 (3) | N8—C22—C26 | 122.5 (5) |
C18—N7—Zn | 126.3 (4) | N8—C22—C10 | 117.2 (5) |
C23—N8—C22 | 117.5 (5) | C26—C22—C10 | 120.3 (5) |
N1—C1—S2 | 123.0 (4) | N8—C23—C24 | 123.5 (6) |
N1—C1—S1 | 117.0 (4) | N8—C23—H23 | 118.2 |
S2—C1—S1 | 119.9 (3) | C24—C23—H23 | 118.2 |
N1—C2—H2A | 109.5 | C25—C24—C23 | 118.7 (5) |
N1—C2—H2B | 109.5 | C25—C24—H24 | 120.6 |
H2A—C2—H2B | 109.5 | C23—C24—H24 | 120.6 |
N1—C2—H2C | 109.5 | C24—C25—C26 | 119.3 (6) |
H2A—C2—H2C | 109.5 | C24—C25—H25 | 120.4 |
H2B—C2—H2C | 109.5 | C26—C25—H25 | 120.4 |
N1—C3—C4 | 113.1 (4) | C25—C26—C22 | 118.4 (6) |
N1—C3—H3A | 109.0 | C25—C26—H26 | 120.8 |
C4—C3—H3A | 109.0 | C22—C26—H26 | 120.8 |
N1—C3—H3B | 109.0 | C27—O3—C30 | 109.4 (5) |
C4—C3—H3B | 109.0 | C28—O4—C29 | 108.4 (5) |
H3A—C3—H3B | 107.8 | O3—C27—C28 | 110.7 (7) |
O1—C4—C3 | 108.2 (4) | O3—C27—H27A | 109.5 |
O1—C4—H4A | 110.1 | C28—C27—H27A | 109.5 |
C3—C4—H4A | 110.1 | O3—C27—H27B | 109.5 |
O1—C4—H4B | 110.1 | C28—C27—H27B | 109.5 |
C3—C4—H4B | 110.1 | H27A—C27—H27B | 108.1 |
H4A—C4—H4B | 108.4 | O4—C28—C27 | 110.6 (6) |
N2—C5—S4 | 120.1 (4) | O4—C28—H28A | 109.5 |
N2—C5—S3 | 116.9 (4) | C27—C28—H28A | 109.5 |
S4—C5—S3 | 123.0 (3) | O4—C28—H28B | 109.5 |
N2—C6—H6A | 109.5 | C27—C28—H28B | 109.5 |
N2—C6—H6B | 109.5 | H28A—C28—H28B | 108.1 |
H6A—C6—H6B | 109.5 | O4—C29—C30 | 110.5 (5) |
N2—C6—H6C | 109.5 | O4—C29—H29A | 109.5 |
H6A—C6—H6C | 109.5 | C30—C29—H29A | 109.5 |
H6B—C6—H6C | 109.5 | O4—C29—H29B | 109.5 |
N2—C7—C8 | 113.2 (5) | C30—C29—H29B | 109.5 |
N2—C7—H7A | 108.9 | H29A—C29—H29B | 108.1 |
C8—C7—H7A | 108.9 | O3—C30—C29 | 112.0 (6) |
N2—C7—H7B | 108.9 | O3—C30—H30A | 109.2 |
C8—C7—H7B | 108.9 | C29—C30—H30A | 109.2 |
H7A—C7—H7B | 107.7 | O3—C30—H30B | 109.2 |
O2—C8—C7 | 109.8 (5) | C29—C30—H30B | 109.2 |
O2—C8—H8A | 109.7 | H30A—C30—H30B | 107.9 |
C7—C8—H8A | 109.7 | C31—O5—C32 | 108.4 (5) |
O2—C8—H8B | 109.7 | O5—C31—C32i | 110.3 (5) |
C7—C8—H8B | 109.7 | O5—C31—H31A | 109.6 |
H8A—C8—H8B | 108.2 | C32i—C31—H31A | 109.6 |
N4—C9—N3 | 123.9 (5) | O5—C31—H31B | 109.6 |
N4—C9—C12 | 122.0 (5) | C32i—C31—H31B | 109.6 |
N3—C9—C12 | 113.9 (4) | H31A—C31—H31B | 108.1 |
N5—C10—N4 | 125.1 (5) | O5—C32—C31i | 109.1 (5) |
N5—C10—C22 | 116.6 (5) | O5—C32—H32A | 109.9 |
N4—C10—C22 | 118.2 (5) | C31i—C32—H32A | 109.9 |
N5—C11—N3 | 124.8 (5) | O5—C32—H32B | 109.9 |
N5—C11—C17 | 120.9 (4) | C31i—C32—H32B | 109.9 |
N3—C11—C17 | 114.3 (4) | H32A—C32—H32B | 108.3 |
N6—C12—C16 | 122.6 (5) | ||
N3—Zn—S1—C1 | −10.2 (3) | C9—N4—C10—N5 | −3.5 (8) |
N6—Zn—S1—C1 | 70.6 (2) | C9—N4—C10—C22 | 175.0 (4) |
N7—Zn—S1—C1 | −90.3 (2) | C10—N5—C11—N3 | −0.2 (7) |
S3—Zn—S1—C1 | 170.79 (17) | C10—N5—C11—C17 | −179.0 (4) |
N3—Zn—S3—C5 | −0.1 (2) | C9—N3—C11—N5 | −4.9 (8) |
N6—Zn—S3—C5 | −75.8 (2) | Zn—N3—C11—N5 | −171.2 (4) |
N7—Zn—S3—C5 | 75.1 (2) | C9—N3—C11—C17 | 173.9 (4) |
S1—Zn—S3—C5 | 179.26 (19) | Zn—N3—C11—C17 | 7.6 (6) |
N6—Zn—N3—C11 | 171.7 (4) | C13—N6—C12—C16 | 0.9 (8) |
N7—Zn—N3—C11 | −7.3 (4) | Zn—N6—C12—C16 | −170.8 (4) |
S1—Zn—N3—C11 | −97.3 (4) | C13—N6—C12—C9 | 178.9 (5) |
S3—Zn—N3—C11 | 81.6 (4) | Zn—N6—C12—C9 | 7.1 (6) |
N6—Zn—N3—C9 | 6.1 (4) | N4—C9—C12—N6 | −179.2 (5) |
N7—Zn—N3—C9 | −172.9 (4) | N3—C9—C12—N6 | −2.2 (7) |
S1—Zn—N3—C9 | 97.1 (4) | N4—C9—C12—C16 | −1.2 (8) |
S3—Zn—N3—C9 | −84.0 (4) | N3—C9—C12—C16 | 175.8 (5) |
N3—Zn—N6—C12 | −7.1 (4) | C12—N6—C13—C14 | −2.0 (8) |
N7—Zn—N6—C12 | −5.3 (5) | Zn—N6—C13—C14 | 169.0 (4) |
S1—Zn—N6—C12 | −149.0 (3) | N6—C13—C14—C15 | 0.9 (9) |
S3—Zn—N6—C12 | 110.6 (4) | C13—C14—C15—C16 | 1.2 (9) |
N3—Zn—N6—C13 | −178.4 (4) | N6—C12—C16—C15 | 1.2 (8) |
N7—Zn—N6—C13 | −176.6 (4) | C9—C12—C16—C15 | −176.7 (5) |
S1—Zn—N6—C13 | 39.7 (4) | C14—C15—C16—C12 | −2.2 (8) |
S3—Zn—N6—C13 | −60.7 (4) | C18—N7—C17—C21 | 0.9 (8) |
N3—Zn—N7—C17 | 5.7 (3) | Zn—N7—C17—C21 | 176.0 (4) |
N6—Zn—N7—C17 | 3.9 (5) | C18—N7—C17—C11 | −178.9 (4) |
S1—Zn—N7—C17 | 147.7 (3) | Zn—N7—C17—C11 | −3.8 (5) |
S3—Zn—N7—C17 | −112.3 (3) | N5—C11—C17—N7 | 176.9 (5) |
N3—Zn—N7—C18 | −179.7 (4) | N3—C11—C17—N7 | −2.0 (7) |
N6—Zn—N7—C18 | 178.5 (4) | N5—C11—C17—C21 | −2.9 (8) |
S1—Zn—N7—C18 | −37.6 (4) | N3—C11—C17—C21 | 178.2 (5) |
S3—Zn—N7—C18 | 62.4 (4) | C17—N7—C18—C19 | −1.4 (8) |
C2—N1—C1—S2 | 178.2 (4) | Zn—N7—C18—C19 | −175.8 (4) |
C3—N1—C1—S2 | 5.0 (7) | N7—C18—C19—C20 | 0.1 (8) |
C2—N1—C1—S1 | −1.2 (6) | C18—C19—C20—C21 | 1.7 (8) |
C3—N1—C1—S1 | −174.4 (4) | N7—C17—C21—C20 | 0.8 (8) |
Zn—S1—C1—N1 | −171.5 (3) | C11—C17—C21—C20 | −179.4 (5) |
Zn—S1—C1—S2 | 9.0 (3) | C19—C20—C21—C17 | −2.1 (8) |
C1—N1—C3—C4 | 85.4 (6) | C23—N8—C22—C26 | −0.6 (8) |
C2—N1—C3—C4 | −88.1 (6) | C23—N8—C22—C10 | −178.0 (5) |
N1—C3—C4—O1 | 62.1 (6) | N5—C10—C22—N8 | 176.3 (5) |
C7—N2—C5—S4 | 178.7 (4) | N4—C10—C22—N8 | −2.4 (7) |
C6—N2—C5—S4 | 2.1 (7) | N5—C10—C22—C26 | −1.1 (7) |
C7—N2—C5—S3 | −0.7 (7) | N4—C10—C22—C26 | −179.8 (5) |
C6—N2—C5—S3 | −177.3 (4) | C22—N8—C23—C24 | 1.6 (8) |
Zn—S3—C5—N2 | −171.4 (3) | N8—C23—C24—C25 | −1.8 (9) |
Zn—S3—C5—S4 | 9.2 (4) | C23—C24—C25—C26 | 1.1 (9) |
C5—N2—C7—C8 | −97.2 (6) | C24—C25—C26—C22 | −0.2 (9) |
C6—N2—C7—C8 | 79.5 (6) | N8—C22—C26—C25 | 0.0 (8) |
N2—C7—C8—O2 | −179.5 (5) | C10—C22—C26—C25 | 177.2 (5) |
C10—N4—C9—N3 | −2.3 (7) | C30—O3—C27—C28 | −55.7 (8) |
C10—N4—C9—C12 | 174.4 (5) | C29—O4—C28—C27 | −58.8 (8) |
C11—N3—C9—N4 | 6.3 (8) | O3—C27—C28—O4 | 58.6 (9) |
Zn—N3—C9—N4 | 172.5 (4) | C28—O4—C29—C30 | 59.0 (8) |
C11—N3—C9—C12 | −170.7 (4) | C27—O3—C30—C29 | 56.7 (7) |
Zn—N3—C9—C12 | −4.4 (6) | O4—C29—C30—O3 | −58.9 (7) |
C11—N5—C10—N4 | 4.7 (7) | C32—O5—C31—C32i | −60.6 (7) |
C11—N5—C10—C22 | −173.9 (4) | C31—O5—C32—C31i | 59.8 (7) |
Symmetry code: (i) −x+1, −y, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O···N4ii | 0.84 (7) | 2.34 (8) | 3.038 (8) | 141 (7) |
O1—H1O···N8ii | 0.84 (7) | 2.27 (6) | 2.995 (8) | 146 (7) |
O2—H2O···S2iii | 0.84 (9) | 2.65 (8) | 3.387 (6) | 149 (8) |
Symmetry codes: (ii) x−1, y, z; (iii) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C4H8NOS2)2(C18H12N6)]·1.5C4H8O2 |
Mr | 810.33 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 98 |
a, b, c (Å) | 11.863 (10), 13.019 (11), 13.199 (11) |
α, β, γ (°) | 107.214 (12), 105.780 (15), 100.892 (11) |
V (Å3) | 1792 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.97 |
Crystal size (mm) | 0.40 × 0.30 × 0.05 |
Data collection | |
Diffractometer | Rigaku AFC12/SATURN724 diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.539, 1 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11537, 6940, 5803 |
Rint | 0.067 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.085, 0.222, 1.12 |
No. of reflections | 6940 |
No. of parameters | 459 |
No. of restraints | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 1.54, −1.08 |
Computer programs: CrystalClear (Molecular Structure Corporation & Rigaku, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
Zn—S1 | 2.335 (2) | S1—C1 | 1.744 (6) |
Zn—S3 | 2.368 (2) | S2—C1 | 1.701 (5) |
Zn—N3 | 2.082 (5) | S3—C5 | 1.746 (6) |
Zn—N6 | 2.211 (5) | S4—C5 | 1.692 (6) |
Zn—N7 | 2.249 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O···N4i | 0.84 (7) | 2.34 (8) | 3.038 (8) | 141 (7) |
O1—H1O···N8i | 0.84 (7) | 2.27 (6) | 2.995 (8) | 146 (7) |
O2—H2O···S2ii | 0.84 (9) | 2.65 (8) | 3.387 (6) | 149 (8) |
Symmetry codes: (i) x−1, y, z; (ii) x, y, z−1. |
Acknowledgements
We gratefully thank the Ministry of Higher Education (Malaysia) for funding structural studies through the High-Impact Research scheme (UM.C/HIR/MOHE/SC/12).
References
Addison, A. W., Rao, T. N., Reedijk, J., van Rijn, J. & Verschoor, G. C. (1984). J. Chem. Soc. Dalton Trans. pp. 1349–1356. CSD CrossRef Web of Science Google Scholar
Benson, R. E., Ellis, C. A., Lewis, C. E. & Tiekink, E. R. T. (2007). CrystEngComm, 9, 930–940. Web of Science CSD CrossRef CAS Google Scholar
Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan. Google Scholar
Molecular Structure Corporation & Rigaku (2005). CrystalClear. MSC, The Woodlands, Texas, USA, and Rigaku Corporation, Tokyo, Japan. Google Scholar
Poplaukhin, P. & Tiekink, E. R. T. (2010). CrystEngComm, 12, 1302—1306. Web of Science CSD CrossRef Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Therrin, B. (2011). J. Organomet. Chem. 696, 637–651. Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound, (I), was prepared in the context of previous crystal engineering studies of zinc dithiocarbamates (Benson et al., 2007; Poplaukhin & Tiekink, 2010).
The asymmetric unit of (I) comprises a Zn-containing molecule and one and half dioxane molecules as one dioxane molecule is located about a centre on inversion. The ZnII atom, Fig. 1, is coordinated by two monodentate dithiocarbamate ligands and three N donors from the 2,4,6-tris(pyridin-2-yl)-1,3,5-triazine molecule. The monodentate mode of coordination of the dithiocarbamate ligands is confirmed by the disparity in the C—S bond lengths, Table 1, with the shorter lengths associated with the formally thione C═S bonds. The Zn···S2 and Zn···S4 separations are 3.210 (3) and 3.590 (3) Å, respectively. The observed tridentate mode of coordination of the triazine molecule is often observed in its metal complexes (Therrin, 2011).
The resultant N3S2 donor set defines a square pyramid. This assignment is based on the value calculated for τ of 0.07 for the Zn atom, which compares to the τ values of 0.0 and 1.0 for ideal square pyramidal and trigonal bipyramidal geometries, respectively (Spek, 2009; Addison et al., 1984).
The presence of O—H···S and O—H···N hydrogen bonding leads to supramolecular layers in the ac plane, Fig. 2 and Table 2. The dioxane molecules occupy channels in the crystal structure as highlighted in Fig. 3.