metal-organic compounds
{μ-2-[4-(1,3-Benzothiazol-2-yl)phenyl]-2-azapropane-1,3-dithiolato-κ4S,S′:S,S′}bis[tricarbonyliron(I)]
aSchool of Materials Science and Engineering, Changchun University of Science and Technology, No. 7989 Weixing Road, Changchun 130022, People's Republic of China
*Correspondence e-mail: cust_gaoshang@yahoo.cn
The title compound, [Fe2(C15H12N2S3)(CO)6], was prepared as an azadithiolatodiiron model for the active site of [FeFe]-hydrogenase. The Fe2S2 core adopts a butterfly shape, with each metal having a pseudo square-pyramidal geometry. The N-substituted azadithiolate is μ2-κ4S,S′:S,S′-coordinated to the Fe(CO)3 moieties to form two fused six-membered rings with different conformations. The sum of the C—N—C angles around the N atom [356.85 (15)°] indicates a flattening of the trigonal–pyramidal geometry about the N atom and an increase in the degree of sp2-hybridization.
Related literature
For reviews of hydrogenases, see: Cammack (1999); Evans & Pickett (2003). For the synthesis and structures of models for the active site of Fe-only hydrogenases, see: Lawrence et al. (2001); Song et al. (2005); Liu & Xiao (2011); Yin et al. (2011); For structures of Fe-only hydrogenases, see: Nicolet et al. (1999); Peters et al. (1998).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2005); cell SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812003753/mw2048sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812003753/mw2048Isup2.hkl
All reactions and operations related to the title compound were carried out under a dry, prepurified nitrogen atmosphere with standard Schlenk techniques. All solvents were dried and distilled prior to use according to standard methods. The starting material N,N'-bis(chloromethyl)-(4-benzothiazole)-phenylamine was prepared in 50% yield from 4-benzothiazole-phenylamine (Lawrence et al., 2001). A degassed solution of (µ-S2)Fe2(CO)6 (1.38 g, 4.0 mmol) in 30 ml dry THF was cooled to 195 K. LiEt3BH (1 M solution in THF, 8.0 ml, 8.0 mmol) was dropped into the above solution by syringe over 30 min. N,N'-bis(chloromethyl)-(4-benzothiazole)-phenylamine (2.6 g, 8.0 mmol) was added to the resulting dark green solution causing an immediate change in color to dark red. The mixture was stirred for 2 h at 195 K and another 1 h at room temperature. The solvent was removed on a rotary evaporator and the crude product was purified by
(silica, 20% dichloromethane in hexane as eluent) to give a red solid (1.37 g, 57%). Recrystallization from a CH2Cl2/hexane solution afforded crystals of the title compound suitable for X-ray study.The H atoms attached to C were placed in geometrically calculated positions (C—H = 0.93–0.97 Å) and refined as riding, with Uiso(H) = 1.2Ueq(C).
Data collection: APEX2 (Bruker, 2005); cell
SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title compound with displacement ellipsoids drawn at the 30% probability level and H-atoms omitted. |
[Fe2(C15H12N2S3)(CO)6] | F(000) = 1200 |
Mr = 596.21 | Dx = 1.729 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 8061 reflections |
a = 13.8606 (12) Å | θ = 2.4–28.9° |
b = 7.6900 (7) Å | µ = 1.58 mm−1 |
c = 21.5052 (19) Å | T = 273 K |
β = 92.447 (1)° | Parallelepiped, red |
V = 2290.1 (4) Å3 | 0.45 × 0.22 × 0.10 mm |
Z = 4 |
Bruker APEXII CCD area-detector diffractometer | 4509 independent reflections |
Radiation source: fine-focus sealed tube | 4124 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
ϕ and ω scans | θmax = 26.0°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −17→17 |
Tmin = 0.536, Tmax = 0.858 | k = −9→7 |
12350 measured reflections | l = −23→26 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.023 | w = 1/[σ2(Fo2) + (0.0343P)2 + 0.6533P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.063 | (Δ/σ)max = 0.001 |
S = 1.04 | Δρmax = 0.28 e Å−3 |
4509 reflections | Δρmin = −0.23 e Å−3 |
307 parameters |
[Fe2(C15H12N2S3)(CO)6] | V = 2290.1 (4) Å3 |
Mr = 596.21 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 13.8606 (12) Å | µ = 1.58 mm−1 |
b = 7.6900 (7) Å | T = 273 K |
c = 21.5052 (19) Å | 0.45 × 0.22 × 0.10 mm |
β = 92.447 (1)° |
Bruker APEXII CCD area-detector diffractometer | 4509 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 4124 reflections with I > 2σ(I) |
Tmin = 0.536, Tmax = 0.858 | Rint = 0.020 |
12350 measured reflections |
R[F2 > 2σ(F2)] = 0.023 | 0 restraints |
wR(F2) = 0.063 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.28 e Å−3 |
4509 reflections | Δρmin = −0.23 e Å−3 |
307 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Fe2 | 0.110403 (16) | 0.28234 (3) | 0.149643 (10) | 0.03265 (8) | |
Fe1 | 0.139110 (16) | 0.58723 (3) | 0.114026 (11) | 0.03417 (8) | |
S1 | 0.25452 (3) | 0.37829 (6) | 0.116610 (19) | 0.03648 (10) | |
S2 | 0.11928 (3) | 0.51324 (5) | 0.214607 (19) | 0.03527 (10) | |
S3 | 0.30972 (4) | −0.29556 (7) | 0.43894 (2) | 0.04817 (13) | |
C15 | 0.37264 (11) | −0.2378 (2) | 0.37251 (8) | 0.0354 (4) | |
N1 | 0.30863 (11) | 0.3996 (2) | 0.24269 (7) | 0.0407 (3) | |
C9 | 0.31954 (11) | 0.2394 (2) | 0.27348 (8) | 0.0347 (4) | |
N2 | 0.43589 (10) | −0.3512 (2) | 0.35595 (7) | 0.0392 (3) | |
C16 | 0.37529 (13) | −0.4878 (2) | 0.44399 (8) | 0.0410 (4) | |
C7 | 0.34275 (12) | 0.4258 (3) | 0.18192 (9) | 0.0432 (4) | |
H7A | 0.3992 | 0.3532 | 0.1772 | 0.052* | |
H7B | 0.3633 | 0.5459 | 0.1785 | 0.052* | |
C1 | 0.21836 (13) | 0.7719 (2) | 0.11426 (9) | 0.0434 (4) | |
C12 | 0.35215 (11) | −0.0756 (2) | 0.33922 (7) | 0.0345 (3) | |
C20 | 0.49798 (14) | −0.6393 (3) | 0.38954 (9) | 0.0463 (4) | |
H20A | 0.5398 | −0.6466 | 0.3570 | 0.056* | |
C11 | 0.28990 (12) | 0.0515 (2) | 0.36067 (8) | 0.0402 (4) | |
H11A | 0.2586 | 0.0321 | 0.3974 | 0.048* | |
C8 | 0.23726 (14) | 0.5242 (2) | 0.25908 (9) | 0.0432 (4) | |
H8A | 0.2640 | 0.6396 | 0.2538 | 0.052* | |
H8B | 0.2254 | 0.5101 | 0.3029 | 0.052* | |
C6 | 0.13012 (13) | 0.0967 (2) | 0.20065 (8) | 0.0415 (4) | |
C17 | 0.37132 (16) | −0.6217 (3) | 0.48743 (9) | 0.0529 (5) | |
H17A | 0.3293 | −0.6159 | 0.5200 | 0.063* | |
C3 | 0.02675 (14) | 0.7039 (3) | 0.11762 (9) | 0.0476 (4) | |
C19 | 0.49426 (15) | −0.7706 (3) | 0.43218 (10) | 0.0524 (5) | |
H19A | 0.5343 | −0.8668 | 0.4288 | 0.063* | |
C10 | 0.27360 (12) | 0.2049 (2) | 0.32888 (9) | 0.0412 (4) | |
H10A | 0.2315 | 0.2867 | 0.3444 | 0.049* | |
C18 | 0.43067 (16) | −0.7617 (3) | 0.48100 (10) | 0.0555 (5) | |
H18A | 0.4288 | −0.8526 | 0.5095 | 0.067* | |
C14 | 0.38064 (13) | 0.1106 (2) | 0.25110 (8) | 0.0401 (4) | |
H14A | 0.4110 | 0.1284 | 0.2139 | 0.048* | |
C2 | 0.12325 (13) | 0.5549 (3) | 0.03178 (9) | 0.0475 (4) | |
O6 | 0.13791 (12) | −0.0230 (2) | 0.23068 (7) | 0.0631 (4) | |
C21 | 0.43879 (12) | −0.4948 (2) | 0.39519 (8) | 0.0370 (4) | |
O4 | 0.09231 (14) | 0.0933 (2) | 0.03168 (8) | 0.0794 (5) | |
C13 | 0.39634 (12) | −0.0421 (2) | 0.28349 (8) | 0.0383 (4) | |
H13A | 0.4376 | −0.1251 | 0.2677 | 0.046* | |
C4 | 0.09890 (15) | 0.1660 (3) | 0.07745 (9) | 0.0479 (4) | |
O2 | 0.11222 (12) | 0.5315 (3) | −0.02042 (7) | 0.0755 (5) | |
O3 | −0.04242 (12) | 0.7811 (2) | 0.12089 (9) | 0.0775 (5) | |
O5 | −0.10051 (10) | 0.2857 (2) | 0.15324 (7) | 0.0628 (4) | |
C5 | −0.01899 (13) | 0.2869 (2) | 0.15329 (8) | 0.0417 (4) | |
O1 | 0.27005 (11) | 0.8864 (2) | 0.11324 (9) | 0.0698 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Fe2 | 0.03394 (13) | 0.03136 (14) | 0.03265 (13) | −0.00374 (9) | 0.00159 (9) | −0.00151 (9) |
Fe1 | 0.03240 (13) | 0.03442 (14) | 0.03560 (14) | −0.00048 (9) | 0.00050 (9) | 0.00395 (10) |
S1 | 0.0352 (2) | 0.0389 (2) | 0.0358 (2) | 0.00191 (17) | 0.00669 (16) | −0.00009 (17) |
S2 | 0.0368 (2) | 0.0348 (2) | 0.0344 (2) | 0.00106 (17) | 0.00365 (16) | −0.00375 (16) |
S3 | 0.0525 (3) | 0.0520 (3) | 0.0413 (2) | 0.0123 (2) | 0.0164 (2) | 0.0083 (2) |
C15 | 0.0308 (8) | 0.0442 (10) | 0.0313 (8) | −0.0017 (7) | 0.0010 (6) | −0.0003 (7) |
N1 | 0.0400 (8) | 0.0405 (8) | 0.0412 (8) | 0.0023 (6) | −0.0049 (6) | 0.0018 (6) |
C9 | 0.0299 (8) | 0.0394 (9) | 0.0343 (8) | −0.0017 (7) | −0.0050 (6) | −0.0006 (7) |
N2 | 0.0357 (7) | 0.0432 (8) | 0.0392 (8) | 0.0021 (6) | 0.0062 (6) | 0.0036 (6) |
C16 | 0.0427 (9) | 0.0442 (10) | 0.0362 (9) | 0.0011 (8) | 0.0029 (7) | 0.0023 (8) |
C7 | 0.0328 (9) | 0.0457 (10) | 0.0507 (11) | −0.0039 (7) | −0.0031 (7) | 0.0118 (8) |
C1 | 0.0371 (9) | 0.0390 (10) | 0.0544 (11) | 0.0054 (8) | 0.0040 (8) | 0.0045 (8) |
C12 | 0.0309 (8) | 0.0393 (9) | 0.0332 (8) | −0.0012 (7) | −0.0008 (6) | −0.0012 (7) |
C20 | 0.0431 (10) | 0.0481 (11) | 0.0482 (11) | 0.0048 (8) | 0.0056 (8) | 0.0013 (9) |
C11 | 0.0360 (9) | 0.0483 (10) | 0.0367 (9) | 0.0004 (8) | 0.0079 (7) | 0.0013 (8) |
C8 | 0.0514 (10) | 0.0359 (9) | 0.0413 (9) | 0.0009 (8) | −0.0120 (8) | −0.0048 (8) |
C6 | 0.0448 (10) | 0.0385 (10) | 0.0408 (9) | −0.0051 (8) | −0.0030 (7) | −0.0046 (8) |
C17 | 0.0657 (13) | 0.0521 (12) | 0.0416 (10) | 0.0038 (10) | 0.0120 (9) | 0.0083 (9) |
C3 | 0.0434 (10) | 0.0473 (11) | 0.0520 (11) | 0.0016 (9) | 0.0009 (8) | 0.0083 (9) |
C19 | 0.0548 (12) | 0.0462 (11) | 0.0559 (12) | 0.0107 (9) | 0.0002 (9) | 0.0026 (9) |
C10 | 0.0344 (9) | 0.0442 (10) | 0.0454 (10) | 0.0055 (7) | 0.0057 (7) | −0.0019 (8) |
C18 | 0.0711 (14) | 0.0467 (12) | 0.0484 (12) | 0.0032 (10) | 0.0003 (10) | 0.0122 (9) |
C14 | 0.0429 (9) | 0.0455 (10) | 0.0323 (8) | 0.0001 (8) | 0.0061 (7) | −0.0010 (7) |
C2 | 0.0416 (10) | 0.0589 (12) | 0.0418 (11) | −0.0057 (9) | −0.0003 (8) | 0.0099 (9) |
O6 | 0.0816 (11) | 0.0460 (8) | 0.0606 (9) | −0.0110 (8) | −0.0084 (8) | 0.0136 (7) |
C21 | 0.0344 (8) | 0.0397 (9) | 0.0367 (9) | −0.0017 (7) | −0.0002 (7) | 0.0016 (7) |
O4 | 0.1012 (14) | 0.0845 (13) | 0.0520 (9) | −0.0165 (10) | −0.0026 (9) | −0.0272 (9) |
C13 | 0.0372 (9) | 0.0414 (9) | 0.0366 (9) | 0.0056 (7) | 0.0049 (7) | −0.0019 (7) |
C4 | 0.0543 (11) | 0.0443 (11) | 0.0449 (11) | −0.0076 (9) | −0.0002 (8) | −0.0045 (9) |
O2 | 0.0719 (11) | 0.1161 (15) | 0.0383 (9) | −0.0164 (10) | −0.0014 (7) | 0.0050 (9) |
O3 | 0.0480 (9) | 0.0859 (13) | 0.0990 (14) | 0.0244 (9) | 0.0068 (8) | 0.0107 (10) |
O5 | 0.0376 (8) | 0.0841 (11) | 0.0664 (10) | −0.0050 (7) | 0.0000 (6) | 0.0041 (8) |
C5 | 0.0431 (10) | 0.0420 (10) | 0.0398 (9) | −0.0055 (8) | −0.0008 (7) | 0.0014 (8) |
O1 | 0.0516 (9) | 0.0480 (9) | 0.1105 (14) | −0.0123 (7) | 0.0129 (9) | 0.0029 (9) |
Fe2—C4 | 1.793 (2) | C7—H7B | 0.9700 |
Fe2—C5 | 1.7989 (19) | C1—O1 | 1.136 (2) |
Fe2—C6 | 1.8140 (19) | C12—C13 | 1.393 (2) |
Fe2—S2 | 2.2594 (5) | C12—C11 | 1.395 (2) |
Fe2—S1 | 2.2717 (5) | C20—C19 | 1.366 (3) |
Fe2—Fe1 | 2.5036 (4) | C20—C21 | 1.389 (3) |
Fe1—C2 | 1.790 (2) | C20—H20A | 0.9300 |
Fe1—C1 | 1.7954 (19) | C11—C10 | 1.377 (3) |
Fe1—C3 | 1.802 (2) | C11—H11A | 0.9300 |
Fe1—S2 | 2.2647 (5) | C8—H8A | 0.9700 |
Fe1—S1 | 2.2663 (5) | C8—H8B | 0.9700 |
S1—C7 | 1.8589 (18) | C6—O6 | 1.127 (2) |
S2—C8 | 1.8607 (18) | C17—C18 | 1.366 (3) |
S3—C16 | 1.7360 (19) | C17—H17A | 0.9300 |
S3—C15 | 1.7622 (17) | C3—O3 | 1.133 (2) |
C15—N2 | 1.298 (2) | C19—C18 | 1.401 (3) |
C15—C12 | 1.460 (2) | C19—H19A | 0.9300 |
N1—C9 | 1.404 (2) | C10—H10A | 0.9300 |
N1—C7 | 1.423 (2) | C18—H18A | 0.9300 |
N1—C8 | 1.432 (2) | C14—C13 | 1.378 (2) |
C9—C10 | 1.400 (2) | C14—H14A | 0.9300 |
C9—C14 | 1.402 (2) | C2—O2 | 1.141 (2) |
N2—C21 | 1.389 (2) | O4—C4 | 1.133 (2) |
C16—C17 | 1.393 (3) | C13—H13A | 0.9300 |
C16—C21 | 1.399 (2) | O5—C5 | 1.130 (2) |
C7—H7A | 0.9700 | ||
C4—Fe2—C5 | 89.75 (9) | C21—C16—S3 | 109.31 (13) |
C4—Fe2—C6 | 97.84 (9) | N1—C7—S1 | 115.61 (12) |
C5—Fe2—C6 | 96.54 (8) | N1—C7—H7A | 108.4 |
C4—Fe2—S2 | 158.12 (7) | S1—C7—H7A | 108.4 |
C5—Fe2—S2 | 89.18 (6) | N1—C7—H7B | 108.4 |
C6—Fe2—S2 | 103.99 (6) | S1—C7—H7B | 108.4 |
C4—Fe2—S1 | 86.46 (6) | H7A—C7—H7B | 107.4 |
C5—Fe2—S1 | 154.01 (6) | O1—C1—Fe1 | 178.08 (19) |
C6—Fe2—S1 | 109.45 (6) | C13—C12—C11 | 117.11 (16) |
S2—Fe2—S1 | 84.991 (17) | C13—C12—C15 | 119.76 (15) |
C4—Fe2—Fe1 | 102.22 (7) | C11—C12—C15 | 123.13 (15) |
C5—Fe2—Fe1 | 99.59 (6) | C19—C20—C21 | 119.52 (18) |
C6—Fe2—Fe1 | 154.19 (6) | C19—C20—H20A | 120.2 |
S2—Fe2—Fe1 | 56.499 (14) | C21—C20—H20A | 120.2 |
S1—Fe2—Fe1 | 56.412 (13) | C10—C11—C12 | 121.78 (16) |
C2—Fe1—C1 | 99.31 (9) | C10—C11—H11A | 119.1 |
C2—Fe1—C3 | 92.38 (9) | C12—C11—H11A | 119.1 |
C1—Fe1—C3 | 97.81 (9) | N1—C8—S2 | 116.38 (12) |
C2—Fe1—S2 | 153.38 (7) | N1—C8—H8A | 108.2 |
C1—Fe1—S2 | 107.17 (7) | S2—C8—H8A | 108.2 |
C3—Fe1—S2 | 86.77 (6) | N1—C8—H8B | 108.2 |
C2—Fe1—S1 | 89.01 (7) | S2—C8—H8B | 108.2 |
C1—Fe1—S1 | 97.45 (6) | H8A—C8—H8B | 107.3 |
C3—Fe1—S1 | 164.24 (7) | O6—C6—Fe2 | 176.05 (17) |
S2—Fe1—S1 | 84.996 (17) | C18—C17—C16 | 118.27 (19) |
C2—Fe1—Fe2 | 99.09 (7) | C18—C17—H17A | 120.9 |
C1—Fe1—Fe2 | 147.69 (6) | C16—C17—H17A | 120.9 |
C3—Fe1—Fe2 | 107.70 (6) | O3—C3—Fe1 | 177.9 (2) |
S2—Fe1—Fe2 | 56.300 (13) | C20—C19—C18 | 120.66 (19) |
S1—Fe1—Fe2 | 56.619 (14) | C20—C19—H19A | 119.7 |
C7—S1—Fe1 | 108.66 (6) | C18—C19—H19A | 119.7 |
C7—S1—Fe2 | 112.74 (6) | C11—C10—C9 | 120.92 (16) |
Fe1—S1—Fe2 | 66.969 (15) | C11—C10—H10A | 119.5 |
C8—S2—Fe2 | 112.15 (6) | C9—C10—H10A | 119.5 |
C8—S2—Fe1 | 109.86 (7) | C17—C18—C19 | 121.02 (19) |
Fe2—S2—Fe1 | 67.201 (15) | C17—C18—H18A | 119.5 |
C16—S3—C15 | 89.40 (8) | C19—C18—H18A | 119.5 |
N2—C15—C12 | 124.02 (15) | C13—C14—C9 | 120.90 (16) |
N2—C15—S3 | 114.61 (13) | C13—C14—H14A | 119.6 |
C12—C15—S3 | 121.36 (12) | C9—C14—H14A | 119.6 |
C9—N1—C7 | 121.62 (15) | O2—C2—Fe1 | 178.7 (2) |
C9—N1—C8 | 122.20 (15) | N2—C21—C20 | 125.75 (16) |
C7—N1—C8 | 113.03 (15) | N2—C21—C16 | 114.95 (16) |
C10—C9—C14 | 117.48 (16) | C20—C21—C16 | 119.31 (17) |
C10—C9—N1 | 121.61 (16) | C14—C13—C12 | 121.78 (16) |
C14—C9—N1 | 120.86 (16) | C14—C13—H13A | 119.1 |
C15—N2—C21 | 111.73 (15) | C12—C13—H13A | 119.1 |
C17—C16—C21 | 121.22 (18) | O4—C4—Fe2 | 179.4 (2) |
C17—C16—S3 | 129.47 (15) | O5—C5—Fe2 | 176.98 (18) |
C4—Fe2—Fe1—C2 | 5.43 (9) | C3—Fe1—S2—C8 | −139.75 (9) |
C5—Fe2—Fe1—C2 | −86.40 (9) | S1—Fe1—S2—C8 | 53.70 (6) |
C6—Fe2—Fe1—C2 | 145.66 (15) | Fe2—Fe1—S2—C8 | 106.44 (6) |
S2—Fe2—Fe1—C2 | −168.97 (6) | C2—Fe1—S2—Fe2 | 24.94 (15) |
S1—Fe2—Fe1—C2 | 82.74 (6) | C1—Fe1—S2—Fe2 | −149.00 (6) |
C4—Fe2—Fe1—C1 | −118.59 (14) | C3—Fe1—S2—Fe2 | 113.81 (7) |
C5—Fe2—Fe1—C1 | 149.58 (13) | S1—Fe1—S2—Fe2 | −52.736 (15) |
C6—Fe2—Fe1—C1 | 21.64 (19) | C16—S3—C15—N2 | 0.16 (14) |
S2—Fe2—Fe1—C1 | 67.01 (12) | C16—S3—C15—C12 | 179.08 (14) |
S1—Fe2—Fe1—C1 | −41.28 (12) | C7—N1—C9—C10 | −170.21 (16) |
C4—Fe2—Fe1—C3 | 100.90 (10) | C8—N1—C9—C10 | −11.7 (2) |
C5—Fe2—Fe1—C3 | 9.07 (9) | C7—N1—C9—C14 | 12.7 (2) |
C6—Fe2—Fe1—C3 | −118.87 (16) | C8—N1—C9—C14 | 171.20 (16) |
S2—Fe2—Fe1—C3 | −73.50 (7) | C12—C15—N2—C21 | −178.63 (15) |
S1—Fe2—Fe1—C3 | 178.20 (7) | S3—C15—N2—C21 | 0.26 (19) |
C4—Fe2—Fe1—S2 | 174.40 (7) | C15—S3—C16—C17 | 179.4 (2) |
C5—Fe2—Fe1—S2 | 82.57 (6) | C15—S3—C16—C21 | −0.52 (14) |
C6—Fe2—Fe1—S2 | −45.37 (14) | C9—N1—C7—S1 | 90.84 (17) |
S1—Fe2—Fe1—S2 | −108.29 (2) | C8—N1—C7—S1 | −69.50 (18) |
C4—Fe2—Fe1—S1 | −77.30 (7) | Fe1—S1—C7—N1 | 71.07 (14) |
C5—Fe2—Fe1—S1 | −169.14 (6) | Fe2—S1—C7—N1 | −1.10 (16) |
C6—Fe2—Fe1—S1 | 62.93 (14) | N2—C15—C12—C13 | 5.1 (2) |
S2—Fe2—Fe1—S1 | 108.29 (2) | S3—C15—C12—C13 | −173.67 (13) |
C2—Fe1—S1—C7 | 150.98 (9) | N2—C15—C12—C11 | −174.37 (17) |
C1—Fe1—S1—C7 | 51.72 (9) | S3—C15—C12—C11 | 6.8 (2) |
C3—Fe1—S1—C7 | −113.8 (3) | C13—C12—C11—C10 | −0.9 (3) |
S2—Fe1—S1—C7 | −54.99 (6) | C15—C12—C11—C10 | 178.58 (16) |
Fe2—Fe1—S1—C7 | −107.45 (6) | C9—N1—C8—S2 | −93.06 (18) |
C2—Fe1—S1—Fe2 | −101.57 (6) | C7—N1—C8—S2 | 67.16 (18) |
C1—Fe1—S1—Fe2 | 159.17 (7) | Fe2—S2—C8—N1 | 5.80 (16) |
C3—Fe1—S1—Fe2 | −6.3 (2) | Fe1—S2—C8—N1 | −66.87 (15) |
S2—Fe1—S1—Fe2 | 52.460 (15) | C21—C16—C17—C18 | −0.5 (3) |
C4—Fe2—S1—C7 | −151.33 (10) | S3—C16—C17—C18 | 179.55 (17) |
C5—Fe2—S1—C7 | 126.56 (15) | C21—C20—C19—C18 | 0.7 (3) |
C6—Fe2—S1—C7 | −54.26 (9) | C12—C11—C10—C9 | −0.2 (3) |
S2—Fe2—S1—C7 | 48.83 (7) | C14—C9—C10—C11 | 1.4 (3) |
Fe1—Fe2—S1—C7 | 101.47 (7) | N1—C9—C10—C11 | −175.78 (16) |
C4—Fe2—S1—Fe1 | 107.20 (7) | C16—C17—C18—C19 | 0.2 (3) |
C5—Fe2—S1—Fe1 | 25.09 (14) | C20—C19—C18—C17 | −0.4 (3) |
C6—Fe2—S1—Fe1 | −155.72 (6) | C10—C9—C14—C13 | −1.6 (3) |
S2—Fe2—S1—Fe1 | −52.634 (16) | N1—C9—C14—C13 | 175.70 (16) |
C4—Fe2—S2—C8 | −117.92 (19) | C15—N2—C21—C20 | 179.26 (17) |
C5—Fe2—S2—C8 | 154.81 (9) | C15—N2—C21—C16 | −0.7 (2) |
C6—Fe2—S2—C8 | 58.28 (9) | C19—C20—C21—N2 | 179.07 (18) |
S1—Fe2—S2—C8 | −50.54 (7) | C19—C20—C21—C16 | −1.0 (3) |
Fe1—Fe2—S2—C8 | −103.10 (7) | C17—C16—C21—N2 | −179.15 (18) |
C4—Fe2—S2—Fe1 | −14.81 (18) | S3—C16—C21—N2 | 0.79 (19) |
C5—Fe2—S2—Fe1 | −102.08 (6) | C17—C16—C21—C20 | 0.9 (3) |
C6—Fe2—S2—Fe1 | 161.38 (6) | S3—C16—C21—C20 | −179.16 (14) |
S1—Fe2—S2—Fe1 | 52.558 (15) | C9—C14—C13—C12 | 0.4 (3) |
C2—Fe1—S2—C8 | 131.37 (16) | C11—C12—C13—C14 | 0.8 (3) |
C1—Fe1—S2—C8 | −42.57 (9) | C15—C12—C13—C14 | −178.70 (16) |
Experimental details
Crystal data | |
Chemical formula | [Fe2(C15H12N2S3)(CO)6] |
Mr | 596.21 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 273 |
a, b, c (Å) | 13.8606 (12), 7.6900 (7), 21.5052 (19) |
β (°) | 92.447 (1) |
V (Å3) | 2290.1 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.58 |
Crystal size (mm) | 0.45 × 0.22 × 0.10 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.536, 0.858 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12350, 4509, 4124 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.023, 0.063, 1.04 |
No. of reflections | 4509 |
No. of parameters | 307 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.28, −0.23 |
Computer programs: APEX2 (Bruker, 2005), SAINT-Plus (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
The authors thank the Scientific and Technological Development Project of Jilin Province (grant No. 201101103) and the National Natural Science Foundation of China (grant No. 61106050) for financial support.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Recently [FeFe]-hydrogenases ([FeFe]Hases) have received more attention than other types of hydrogenases due to their much higher efficiency in hydrogen production (Cammack, 1999; Evans & Pickett, 2003). Crystallographic and IR spectroscopy studies revealed the active site of [FeFe]Hases (so-called H-cluster) to contain a butterfly Fe2S2 subunit (Peters et al., 1998) and a variety of transition metal sulfides have been prepared as models of the diiron subunit of the H-cluster (Song et al., 2005; Yin et al., 2011; Liu & Xiao, 2011). We have synthesized the title compound as a structural model for the active site of [FeFe]Hases and report its crystal structure.
In the title compound, the Fe2S2 core adopts a butterfly framework with each metal having a pseudo square-pyramidal geometry. The length of the Fe—Fe bond [2.5036 (4) Å] is slightly shorter than those in the structures of natural enzymes (ca 2.6 Å) (Peters et al., 1998; Nicolet et al., 1999). The structure features two fused six-membered rings: Fe1—S1—C7—N1—C8—S2 which adopts a chair conformation and Fe2—S1—C7—N1—C8—S2 which adopts a boat conformation. The sum of the C—N—C angles around N1 atom is 356.85 (15)° implying a noticeable flattening of the trigonal pyramidal geometry about N1 and an increase in the degree of p-π conjugation between the substituted phenyl ring and the p-orbital of the bridging N atom. The distance of N1 from the plane defined by C7, C8 and C9 is 0.146 (2) Å and the dihedral angle between this plane and the mean plane of the adjacent phenyl ring is 2.5 (1)°. The substituted phenyl ring attached to N1 lies in an axial position relative to the metalloheterocycle and slants towards the Fe2(CO)3 unit. As a result, the C1—Fe1—Fe2 angle is enlarged by ca 7° compared with the C6—Fe2—Fe1 angle.
The molecular structure of the title compound is shown in Fig.1.