metal-organic compounds
Bis(μ-3-nitrophthalato-κ2O1:O2)bis[(thiourea-κS)zinc] dihydrate
aSchool of Environment and Chemical Engineering, and Key Laboratory of Hollow Fiber Membrane Materials and Membrane Process, Tianjin Polytechnic University, Tianjin 300387, People's Republic of China
*Correspondence e-mail: guomlin@yahoo.com
In the title complex, [Zn2(C8H3NO6)2(CH4N2S)4]·2H2O, the carboxylate groups of the 3-nitrophthalate ligands coordinate in a bis-monodentate mode to the ZnII cations. This results in the formation of a centrosymmetric dimer containing two ZnII cations with distorted tetrahedral geometries provided by the O atoms of two different 3-nitrophthalate dianions and the S atoms of two non-equivalent coordinated thiourea molecules. The exhibits N—H⋯O and O—H⋯O hydrogen bonds which link the dimers into a three-dimensional network.
Related literature
For the structures of similar bis[(μ2-homophthalato)bis(thiourea)zinc] complexes, see: Burrows et al. (2000). For other metal complexes of dicarboxylate dianions and thiourea, see: Burrows et al. (2004); Ke et al. (2002); Zhang et al. (2000).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku/MSC, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812004679/mw2049sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812004679/mw2049Isup2.hkl
Zinc oxide (0.21 g, 2.5 mmol) was added to a stirred solution of 3-nitrophthalic acid (0.53 g, 2.5 mmol) in boiling water (20.0 ml) over a period of 40 min following which thiourea (0.30 g, 4 mmol) was added to the solution. After filtration, slow evaporation over a period of a week at room temperature provided colorless needle crystals of (I).
The H atoms of the water molecule were found in difference Fourier maps. However, during
they were fixed at O–H distances of 0.85 Å and their Uiso values were set at 1.5 Ueq(O). The H atoms of C—H and N—H groups were treated as riding, with C–H = 0.93 Å, and Uiso (H) = 1.2 Ueq(C) and N–H = 0.90 Å, and Uiso (H) = 1.2 Ueq(N). The C10, N3, N4 unit shows a rotational disorder about the C10—S2 bond. A simple split-atom model for the two nitrogen atoms is used in of this structure. Each of the N atoms bonded to C10 is disordered over at least two sites. Refined occupancy factors for atoms N3/N3' and N4/N4' were 0.53 (3):0.47 (3).Data collection: CrystalClear (Rigaku/MSC, 2005); cell
CrystalClear (Rigaku/MSC, 2005); data reduction: CrystalClear (Rigaku/MSC, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. A view of the structure of (I) showing the atom-numbering scheme and coordination environment for Zn atom; displacement ellipsoids were drawn at the 50% probability level [Symmetry codes: (i) -x + 1, -y + 1, -z + 1]. Only the major component of the disorder is shown. | |
Fig. 2. The packing diagram of (I) showing the hydrogen-bonding interactions. For clarity, the minor components have been omitted. |
[Zn2(C8H3NO6)2(CH4N2S)4]·2H2O | F(000) = 904 |
Mr = 889.49 | Dx = 1.791 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 6473 reflections |
a = 7.661 (3) Å | θ = 1.8–27.9° |
b = 18.999 (7) Å | µ = 1.79 mm−1 |
c = 11.732 (4) Å | T = 294 K |
β = 104.960 (6)° | Needle, colorless |
V = 1649.7 (11) Å3 | 0.20 × 0.10 × 0.08 mm |
Z = 2 |
Rigaku Saturn CCD area-detector diffractometer | 3905 independent reflections |
Radiation source: rotating anode | 3018 reflections with I > 2σ(I) |
Confocal monochromator | Rint = 0.030 |
Detector resolution: 28.571 pixels mm-1 | θmax = 27.9°, θmin = 2.1° |
ω scans | h = −10→9 |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) | k = −24→24 |
Tmin = 0.803, Tmax = 0.885 | l = −15→15 |
13709 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.024 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.064 | H-atom parameters constrained |
S = 1.00 | w = 1/[σ2(Fo2) + (0.034P)2] where P = (Fo2 + 2Fc2)/3 |
3905 reflections | (Δ/σ)max = 0.001 |
245 parameters | Δρmax = 0.35 e Å−3 |
19 restraints | Δρmin = −0.50 e Å−3 |
[Zn2(C8H3NO6)2(CH4N2S)4]·2H2O | V = 1649.7 (11) Å3 |
Mr = 889.49 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.661 (3) Å | µ = 1.79 mm−1 |
b = 18.999 (7) Å | T = 294 K |
c = 11.732 (4) Å | 0.20 × 0.10 × 0.08 mm |
β = 104.960 (6)° |
Rigaku Saturn CCD area-detector diffractometer | 3905 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) | 3018 reflections with I > 2σ(I) |
Tmin = 0.803, Tmax = 0.885 | Rint = 0.030 |
13709 measured reflections |
R[F2 > 2σ(F2)] = 0.024 | 19 restraints |
wR(F2) = 0.064 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.35 e Å−3 |
3905 reflections | Δρmin = −0.50 e Å−3 |
245 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Zn1 | 0.26375 (3) | 0.465538 (10) | 0.296748 (17) | 0.01321 (7) | |
S1 | 0.38057 (7) | 0.46840 (2) | 0.13467 (4) | 0.02084 (11) | |
S2 | −0.04728 (6) | 0.45989 (2) | 0.25699 (4) | 0.01749 (11) | |
O1 | 0.55143 (16) | 0.59210 (7) | 0.30902 (11) | 0.0204 (3) | |
O2 | 0.31823 (16) | 0.55754 (6) | 0.37813 (10) | 0.0161 (3) | |
O3 | 0.61945 (17) | 0.59897 (6) | 0.57337 (11) | 0.0174 (3) | |
O4 | 0.69068 (19) | 0.69389 (7) | 0.68684 (11) | 0.0275 (3) | |
O5 | 0.06166 (18) | 0.73729 (7) | 0.13145 (11) | 0.0259 (3) | |
O6 | 0.18545 (19) | 0.63506 (7) | 0.17013 (12) | 0.0265 (3) | |
N1 | 0.2512 (2) | 0.41575 (8) | −0.07518 (13) | 0.0231 (4) | |
H1A | 0.3054 | 0.4533 | −0.0982 | 0.028* | |
H1B | 0.1905 | 0.3849 | −0.1292 | 0.028* | |
N2 | 0.1825 (2) | 0.35129 (8) | 0.07208 (13) | 0.0197 (3) | |
H2A | 0.1903 | 0.3450 | 0.1493 | 0.024* | |
H2B | 0.1214 | 0.3201 | 0.0188 | 0.024* | |
N3 | −0.0126 (14) | 0.3943 (6) | 0.4644 (9) | 0.0311 (18) | 0.53 (3) |
H3A | 0.0835 | 0.3710 | 0.4527 | 0.037* | 0.53 (3) |
H3B | −0.0499 | 0.3863 | 0.5300 | 0.037* | 0.53 (3) |
N4 | −0.2513 (9) | 0.4699 (6) | 0.4019 (7) | 0.0212 (14) | 0.53 (3) |
H4A | −0.3110 | 0.4987 | 0.3440 | 0.025* | 0.53 (3) |
H4B | −0.2931 | 0.4628 | 0.4660 | 0.025* | 0.53 (3) |
N3' | 0.0236 (16) | 0.4119 (6) | 0.4809 (8) | 0.0223 (17) | 0.47 (3) |
H3'A | 0.1369 | 0.4041 | 0.4753 | 0.027* | 0.47 (3) |
H3'B | −0.0070 | 0.4010 | 0.5478 | 0.027* | 0.47 (3) |
N4' | −0.2637 (8) | 0.4451 (9) | 0.3977 (8) | 0.0306 (19) | 0.47 (3) |
H4'A | −0.3495 | 0.4646 | 0.3389 | 0.037* | 0.47 (3) |
H4'B | −0.2890 | 0.4336 | 0.4661 | 0.037* | 0.47 (3) |
N5 | 0.1667 (2) | 0.69621 (8) | 0.19691 (13) | 0.0187 (3) | |
C1 | 0.4272 (2) | 0.60353 (9) | 0.35579 (15) | 0.0139 (4) | |
C2 | 0.3923 (2) | 0.67846 (9) | 0.38999 (15) | 0.0121 (3) | |
C3 | 0.2711 (2) | 0.72277 (9) | 0.31257 (15) | 0.0149 (4) | |
C4 | 0.2396 (2) | 0.79171 (9) | 0.33902 (17) | 0.0191 (4) | |
H4 | 0.1577 | 0.8191 | 0.2847 | 0.023* | |
C5 | 0.3301 (2) | 0.81947 (9) | 0.44617 (16) | 0.0198 (4) | |
H5 | 0.3125 | 0.8661 | 0.4646 | 0.024* | |
C6 | 0.4482 (2) | 0.77666 (9) | 0.52632 (16) | 0.0164 (4) | |
H6 | 0.5074 | 0.7948 | 0.5997 | 0.020* | |
C7 | 0.4805 (2) | 0.70735 (9) | 0.49987 (15) | 0.0134 (4) | |
C8 | 0.6076 (2) | 0.66467 (9) | 0.59491 (15) | 0.0148 (4) | |
C9 | 0.2607 (2) | 0.40643 (9) | 0.03736 (16) | 0.0173 (4) | |
C10 | −0.1008 (2) | 0.43850 (10) | 0.38726 (16) | 0.0185 (4) | |
O7 | 0.83935 (17) | 0.67482 (7) | 0.28846 (11) | 0.0237 (3) | |
H7A | 0.7478 | 0.6517 | 0.2960 | 0.036* | |
H7B | 0.8098 | 0.7152 | 0.2584 | 0.036* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.01454 (11) | 0.01171 (11) | 0.01271 (12) | −0.00086 (7) | 0.00228 (8) | −0.00136 (8) |
S1 | 0.0248 (2) | 0.0223 (3) | 0.0178 (2) | −0.00789 (18) | 0.0096 (2) | −0.00637 (19) |
S2 | 0.0157 (2) | 0.0219 (2) | 0.0154 (2) | −0.00093 (17) | 0.00484 (18) | 0.00302 (18) |
O1 | 0.0182 (6) | 0.0195 (7) | 0.0255 (7) | −0.0014 (5) | 0.0091 (6) | −0.0084 (5) |
O2 | 0.0224 (7) | 0.0112 (6) | 0.0149 (7) | −0.0049 (5) | 0.0050 (6) | −0.0018 (5) |
O3 | 0.0208 (6) | 0.0130 (6) | 0.0164 (7) | 0.0030 (5) | 0.0009 (6) | −0.0008 (5) |
O4 | 0.0386 (8) | 0.0150 (7) | 0.0194 (7) | −0.0019 (6) | −0.0098 (6) | −0.0017 (5) |
O5 | 0.0258 (7) | 0.0248 (8) | 0.0217 (7) | 0.0036 (6) | −0.0035 (6) | 0.0052 (6) |
O6 | 0.0362 (8) | 0.0194 (7) | 0.0201 (7) | 0.0019 (6) | 0.0005 (6) | −0.0040 (6) |
N1 | 0.0316 (9) | 0.0216 (9) | 0.0154 (8) | −0.0012 (7) | 0.0050 (7) | −0.0003 (6) |
N2 | 0.0248 (8) | 0.0211 (8) | 0.0117 (8) | −0.0058 (6) | 0.0019 (7) | −0.0046 (6) |
N3 | 0.031 (3) | 0.030 (3) | 0.035 (3) | 0.010 (3) | 0.014 (2) | 0.015 (3) |
N4 | 0.024 (2) | 0.021 (3) | 0.024 (2) | −0.0007 (18) | 0.0156 (18) | 0.004 (2) |
N3' | 0.038 (4) | 0.019 (3) | 0.015 (3) | 0.003 (3) | 0.017 (3) | 0.004 (2) |
N4' | 0.016 (2) | 0.054 (5) | 0.021 (2) | −0.014 (3) | 0.0036 (18) | 0.010 (3) |
N5 | 0.0186 (8) | 0.0204 (9) | 0.0166 (8) | −0.0025 (6) | 0.0033 (7) | 0.0021 (6) |
C1 | 0.0146 (8) | 0.0140 (9) | 0.0108 (9) | −0.0005 (6) | −0.0011 (7) | −0.0004 (6) |
C2 | 0.0119 (8) | 0.0105 (8) | 0.0158 (9) | −0.0018 (6) | 0.0072 (7) | −0.0004 (6) |
C3 | 0.0153 (8) | 0.0156 (9) | 0.0135 (9) | −0.0025 (7) | 0.0034 (7) | 0.0003 (7) |
C4 | 0.0184 (9) | 0.0168 (9) | 0.0212 (10) | 0.0036 (7) | 0.0033 (8) | 0.0050 (7) |
C5 | 0.0232 (9) | 0.0113 (9) | 0.0253 (10) | 0.0020 (7) | 0.0070 (8) | −0.0012 (7) |
C6 | 0.0169 (8) | 0.0141 (9) | 0.0186 (9) | −0.0013 (7) | 0.0050 (8) | −0.0021 (7) |
C7 | 0.0124 (8) | 0.0126 (9) | 0.0157 (9) | −0.0009 (6) | 0.0044 (7) | 0.0010 (7) |
C8 | 0.0153 (8) | 0.0131 (9) | 0.0164 (9) | −0.0021 (6) | 0.0047 (8) | 0.0006 (7) |
C9 | 0.0166 (9) | 0.0184 (10) | 0.0164 (9) | 0.0040 (7) | 0.0032 (8) | −0.0018 (7) |
C10 | 0.0225 (9) | 0.0170 (9) | 0.0163 (10) | −0.0086 (7) | 0.0054 (8) | −0.0047 (7) |
O7 | 0.0227 (7) | 0.0188 (7) | 0.0303 (8) | 0.0006 (5) | 0.0083 (6) | 0.0061 (6) |
Zn1—O3i | 1.9801 (13) | N4—H4'A | 0.9136 |
Zn1—O2 | 1.9839 (13) | N4—H4'B | 1.1135 |
Zn1—S1 | 2.3018 (8) | N3'—C10 | 1.353 (8) |
Zn1—S2 | 2.3093 (10) | N3'—H3A | 1.0006 |
S1—C9 | 1.7295 (18) | N3'—H3B | 1.0258 |
S2—C10 | 1.730 (2) | N3'—H3'A | 0.9000 |
O1—C1 | 1.234 (2) | N3'—H3'B | 0.8999 |
O2—C1 | 1.282 (2) | N4'—C10 | 1.291 (6) |
O3—C8 | 1.281 (2) | N4'—H4A | 1.2029 |
O3—Zn1i | 1.9801 (13) | N4'—H4B | 0.9480 |
O4—C8 | 1.234 (2) | N4'—H4'A | 0.9001 |
O5—N5 | 1.2359 (19) | N4'—H4'B | 0.9000 |
O6—N5 | 1.222 (2) | N5—C3 | 1.475 (2) |
N1—C9 | 1.315 (2) | C1—C2 | 1.521 (2) |
N1—H1A | 0.9000 | C2—C3 | 1.400 (2) |
N1—H1B | 0.9000 | C2—C7 | 1.403 (2) |
N2—C9 | 1.322 (2) | C3—C4 | 1.382 (3) |
N2—H2A | 0.9000 | C4—C5 | 1.374 (3) |
N2—H2B | 0.9001 | C4—H4 | 0.9300 |
N3—C10 | 1.290 (7) | C5—C6 | 1.387 (2) |
N3—H3A | 0.9000 | C5—H5 | 0.9300 |
N3—H3B | 0.8999 | C6—C7 | 1.390 (2) |
N3—H3'A | 1.1353 | C6—H6 | 0.9300 |
N3—H3'B | 0.9767 | C7—C8 | 1.513 (2) |
N4—C10 | 1.348 (6) | O7—H7A | 0.8510 |
N4—H4A | 0.8999 | O7—H7B | 0.8508 |
N4—H4B | 0.9000 | ||
O3i—Zn1—O2 | 100.25 (5) | H4B—N4'—H4'A | 102.4 |
O3i—Zn1—S1 | 117.10 (4) | C10—N4'—H4'B | 119.8 |
O2—Zn1—S1 | 107.36 (4) | H4A—N4'—H4'B | 124.7 |
O3i—Zn1—S2 | 111.37 (4) | H4'A—N4'—H4'B | 120.0 |
O2—Zn1—S2 | 102.48 (4) | O6—N5—O5 | 122.81 (15) |
S1—Zn1—S2 | 115.80 (2) | O6—N5—C3 | 119.35 (14) |
C9—S1—Zn1 | 106.01 (7) | O5—N5—C3 | 117.84 (15) |
C10—S2—Zn1 | 107.45 (6) | O1—C1—O2 | 126.07 (16) |
C1—O2—Zn1 | 124.72 (12) | O1—C1—C2 | 119.37 (15) |
C8—O3—Zn1i | 119.48 (11) | O2—C1—C2 | 114.56 (15) |
C9—N1—H1A | 119.8 | C3—C2—C7 | 116.24 (15) |
C9—N1—H1B | 120.2 | C3—C2—C1 | 121.59 (15) |
H1A—N1—H1B | 120.0 | C7—C2—C1 | 122.16 (14) |
C9—N2—H2A | 119.8 | C4—C3—C2 | 123.32 (16) |
C9—N2—H2B | 120.2 | C4—C3—N5 | 116.51 (15) |
H2A—N2—H2B | 120.0 | C2—C3—N5 | 120.16 (15) |
C10—N3—H3A | 120.9 | C5—C4—C3 | 119.54 (16) |
C10—N3—H3B | 119.0 | C5—C4—H4 | 120.2 |
H3A—N3—H3B | 120.0 | C3—C4—H4 | 120.2 |
C10—N3—H3'A | 107.6 | C4—C5—C6 | 118.80 (17) |
H3B—N3—H3'A | 117.8 | C4—C5—H5 | 120.6 |
C10—N3—H3'B | 119.9 | C6—C5—H5 | 120.6 |
H3A—N3—H3'B | 113.0 | C5—C6—C7 | 121.77 (17) |
H3'A—N3—H3'B | 94.8 | C5—C6—H6 | 119.1 |
C10—N4—H4A | 117.3 | C7—C6—H6 | 119.1 |
C10—N4—H4B | 122.7 | C6—C7—C2 | 120.30 (16) |
H4A—N4—H4B | 120.0 | C6—C7—C8 | 117.45 (16) |
C10—N4—H4'A | 113.7 | C2—C7—C8 | 122.22 (15) |
H4B—N4—H4'A | 105.2 | O4—C8—O3 | 124.33 (16) |
C10—N4—H4'B | 101.0 | O4—C8—C7 | 119.46 (16) |
H4A—N4—H4'B | 135.9 | O3—C8—C7 | 116.20 (15) |
H4'A—N4—H4'B | 100.1 | N1—C9—N2 | 120.25 (17) |
C10—N3'—H3A | 108.0 | N1—C9—S1 | 116.95 (14) |
C10—N3'—H3B | 105.1 | N2—C9—S1 | 122.79 (14) |
H3A—N3'—H3B | 100.6 | N3—C10—N4' | 109.9 (6) |
C10—N3'—H3'A | 119.5 | N3—C10—N4 | 120.6 (6) |
H3B—N3'—H3'A | 130.1 | N4'—C10—N3' | 117.1 (6) |
C10—N3'—H3'B | 120.5 | N4—C10—N3' | 120.6 (6) |
H3A—N3'—H3'B | 110.8 | N3—C10—S2 | 124.9 (5) |
H3'A—N3'—H3'B | 120.0 | N4'—C10—S2 | 121.1 (4) |
C10—N4'—H4A | 101.6 | N4—C10—S2 | 114.5 (4) |
C10—N4'—H4B | 124.1 | N3'—C10—S2 | 121.8 (5) |
H4A—N4'—H4B | 92.1 | H7A—O7—H7B | 111.7 |
C10—N4'—H4'A | 120.0 | ||
O3i—Zn1—S1—C9 | 91.23 (8) | C2—C3—C4—C5 | 0.0 (3) |
O2—Zn1—S1—C9 | −157.10 (7) | N5—C3—C4—C5 | 178.91 (16) |
S2—Zn1—S1—C9 | −43.36 (7) | C3—C4—C5—C6 | −1.5 (3) |
O3i—Zn1—S2—C10 | 29.72 (8) | C4—C5—C6—C7 | 1.7 (3) |
O2—Zn1—S2—C10 | −76.68 (8) | C5—C6—C7—C2 | −0.3 (3) |
S1—Zn1—S2—C10 | 166.81 (7) | C5—C6—C7—C8 | −178.29 (16) |
O3i—Zn1—O2—C1 | 110.95 (13) | C3—C2—C7—C6 | −1.1 (2) |
S1—Zn1—O2—C1 | −11.84 (13) | C1—C2—C7—C6 | 178.24 (16) |
S2—Zn1—O2—C1 | −134.26 (12) | C3—C2—C7—C8 | 176.76 (15) |
Zn1—O2—C1—O1 | −22.5 (2) | C1—C2—C7—C8 | −3.9 (2) |
Zn1—O2—C1—C2 | 156.42 (11) | Zn1i—O3—C8—O4 | 13.0 (2) |
O1—C1—C2—C3 | 91.4 (2) | Zn1i—O3—C8—C7 | −166.24 (11) |
O2—C1—C2—C3 | −87.6 (2) | C6—C7—C8—O4 | −6.8 (2) |
O1—C1—C2—C7 | −87.9 (2) | C2—C7—C8—O4 | 175.24 (17) |
O2—C1—C2—C7 | 93.14 (19) | C6—C7—C8—O3 | 172.46 (16) |
C7—C2—C3—C4 | 1.3 (3) | C2—C7—C8—O3 | −5.5 (2) |
C1—C2—C3—C4 | −178.07 (16) | Zn1—S1—C9—N1 | 154.73 (13) |
C7—C2—C3—N5 | −177.58 (15) | Zn1—S1—C9—N2 | −25.98 (16) |
C1—C2—C3—N5 | 3.1 (2) | Zn1—S2—C10—N3 | −38.9 (8) |
O6—N5—C3—C4 | −178.06 (17) | Zn1—S2—C10—N4' | 166.3 (9) |
O5—N5—C3—C4 | 1.2 (2) | Zn1—S2—C10—N4 | 143.9 (5) |
O6—N5—C3—C2 | 0.9 (2) | Zn1—S2—C10—N3' | −16.2 (6) |
O5—N5—C3—C2 | −179.85 (16) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O7—H7B···O4ii | 0.85 | 2.03 | 2.870 (2) | 169 |
O7—H7A···O1 | 0.85 | 1.92 | 2.769 (2) | 175 |
N4′—H4′B···O2iii | 0.90 | 1.91 | 2.768 (9) | 160 |
N4′—H4′A···O1iv | 0.90 | 2.54 | 3.182 (15) | 129 |
N3′—H3′B···O7i | 0.90 | 2.48 | 3.110 (8) | 128 |
N3′—H3′A···O3i | 0.90 | 2.09 | 2.971 (12) | 166 |
N4—H4B···O2iii | 0.90 | 1.93 | 2.807 (8) | 165 |
N4—H4A···O1iv | 0.90 | 2.05 | 2.830 (8) | 144 |
N3—H3B···O7i | 0.90 | 2.59 | 3.147 (8) | 121 |
N3—H3A···O3i | 0.90 | 2.44 | 3.159 (10) | 137 |
N2—H2B···O5v | 0.90 | 2.23 | 3.119 (2) | 168 |
N2—H2A···O4i | 0.90 | 2.04 | 2.874 (2) | 153 |
N1—H1B···O7vi | 0.90 | 2.15 | 2.968 (2) | 151 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, −y+3/2, z−1/2; (iii) −x, −y+1, −z+1; (iv) x−1, y, z; (v) −x, −y+1, −z; (vi) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | [Zn2(C8H3NO6)2(CH4N2S)4]·2H2O |
Mr | 889.49 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 294 |
a, b, c (Å) | 7.661 (3), 18.999 (7), 11.732 (4) |
β (°) | 104.960 (6) |
V (Å3) | 1649.7 (11) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.79 |
Crystal size (mm) | 0.20 × 0.10 × 0.08 |
Data collection | |
Diffractometer | Rigaku Saturn CCD area-detector diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku/MSC, 2005) |
Tmin, Tmax | 0.803, 0.885 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13709, 3905, 3018 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.658 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.024, 0.064, 1.00 |
No. of reflections | 3905 |
No. of parameters | 245 |
No. of restraints | 19 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.35, −0.50 |
Computer programs: CrystalClear (Rigaku/MSC, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O7—H7B···O4i | 0.85 | 2.03 | 2.870 (2) | 169.1 |
O7—H7A···O1 | 0.85 | 1.92 | 2.769 (2) | 174.8 |
N4'—H4'B···O2ii | 0.90 | 1.91 | 2.768 (9) | 159.9 |
N4'—H4'A···O1iii | 0.90 | 2.54 | 3.182 (15) | 129.2 |
N3'—H3'B···O7iv | 0.90 | 2.48 | 3.110 (8) | 127.6 |
N3'—H3'A···O3iv | 0.90 | 2.09 | 2.971 (12) | 166.4 |
N4—H4B···O2ii | 0.90 | 1.93 | 2.807 (8) | 165.2 |
N4—H4A···O1iii | 0.90 | 2.05 | 2.830 (8) | 144.3 |
N3—H3B···O7iv | 0.90 | 2.59 | 3.147 (8) | 120.7 |
N3—H3A···O3iv | 0.90 | 2.44 | 3.159 (10) | 136.9 |
N2—H2B···O5v | 0.90 | 2.23 | 3.119 (2) | 168.0 |
N2—H2A···O4iv | 0.90 | 2.04 | 2.874 (2) | 153.2 |
N1—H1B···O7vi | 0.90 | 2.15 | 2.968 (2) | 151.2 |
Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) −x, −y+1, −z+1; (iii) x−1, y, z; (iv) −x+1, −y+1, −z+1; (v) −x, −y+1, −z; (vi) −x+1, −y+1, −z. |
Acknowledgements
The authors thank Tianjin Polytechnic University for financial support.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Thiourea as a ligand has an important role in the formation of metal co-ordination complexes with dicarboxylates because it contain hydrogen bond donors that may serve to link the chains through N–H···O hydrogen bonds (Burrows et al. (2000, 2004); Zhang et al. (2000); Ke et al. (2002)). We have used the 3-nitrophthalate dianion and thiourea as ligands and have obtained the title dimeric, four-coordinate 3-nitrophthalate-zinc complex, (I).
The asymmetric unit in the structure of (I) comprises one Zn atom, one complete 3-nitrophthate dianion and two non-equivalent thiourea molecules. The centrosymmetric dimer and is shown in Fig. 1 which displays the full coordination of the Zn atom.
A rotational disorder about the C10—S2 bond in the C10, N3, N4 unit is observed. Each of the two N atoms bonded to C10 was successfully refined using a split-site model (N3/N3' and N4/N4'), with occupancies of 0.53 (3) for N3 and N4, and 0.47 (3) for N3' and N4'.
The Zn atom shows a distorted tetrahedral coordination comprised of two O atoms from the carboxylate groups of two different 3-nitrophthalates and two S atoms of two non-equivalent coordinated thiourea molecules. The packing is stabilized by weak intra- and intermolecular N—H···O and O—H···O hydrogen bond.(see Table 1). A packing diagram is shown in Fig. 2.