organic compounds
6-Methyl-3-phenyl-2-sulfanylidene-1,2,3,4-tetrahydroquinazolin-4-one
aDepartment of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, Riyadh 11451, Saudi Arabia, bDepartment of Organic Chemistry, Faculty of Pharmacy, Al-Azhar University, Cairo 11884, Egypt, cDepartment of Medicinal Chemistry, Faculty of Pharmacy, University of Mansoura, Mansoura 35516, Egypt, dDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia, and eChemistry Department, Faculty of Science, King Abdulaziz University, PO Box 80203 Jeddah, Saudi Arabia
*Correspondence e-mail: edward.tiekink@gmail.com
The title compound, C15H12N2OS, exists as the thione tautomer in the solid state. The phenyl group is almost perpendicular [dihedral angle = 87.96 (5)°] to the fused ring system (r.m.s. deviation = 0.036 Å for 13 ring and exocyclic non-H atoms). In the crystal, centrosymmetric dimers, sustained by pairs of N—H⋯S hydrogen bonds, are connected into layers parallel to (-101) by C—H⋯O and C—H⋯S interactions.
Related literature
For recent studies on synthesis, drug discovery and crystal structures of quinazoline-4(3H)-one derivatives, see: El-Azab & El-Tahir (2012); El-Azab et al. (2011, 2010). For the antimicrobial activity of the title compound, see: Al-Omar et al. (2004). For the structures of related compounds, see: Bowman et al. (2007); Hashim et al. (2010).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2011); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536812007301/qm2054sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812007301/qm2054Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812007301/qm2054Isup3.cml
A mixture of 2-amino-5-methylbenzoic acid (1.51 g m, 10 mmol) and phenyl isothiocyanate (1.35 g m, 10 mmol) in absolute ethanol (30 ml) containing triethylamine (1.1 mg, 10 mmol) was refluxed for 3 h. The reaction mixture was allowed to cool, the solvent was removed under reduced pressure, and the solid obtained was dried and recrystallized from EtOH. Yield 90%; M.pt: 340–342 K; 1H NMR (500 MHz, DMSO-d6): δ 12.98 (s, 1H, exchangeable), 7.75 (s, 1H), 7.60 (d, 1H, J=8.0 Hz), 7.48 (t, 2H, J=7.0, 7.5 Hz), 7.41 (d, 1H, J=7.0 Hz), 7.36 (d, 1H, J=8.0 Hz), 7.26 (d, 2H, J=8.0 Hz), 2.37 (s, 3H). 13C NMR (DMSO-d6): δ 176.0, 160.2, 139.8, 138.1, 137.1, 134.4, 129.5, 129.3, 128.5, 127.2, 116.5, 116.2, 20.9.
Carbon-bound H-atoms were placed in calculated positions [C—H = 0.95 to 0.98 Å, Uiso(H) = 1.2 to 1.5Ueq(C)] and were included in the
in the riding model approximation. The N—H atom was located in a difference Fourier map, and was refined with distance restraint of N—H = 0.88±0.01 Å; the Uiso value was refined.Data collection: CrysAlis PRO (Agilent, 2011); cell
CrysAlis PRO (Agilent, 2011); data reduction: CrysAlis PRO (Agilent, 2011); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).C15H12N2OS | F(000) = 560 |
Mr = 268.33 | Dx = 1.422 Mg m−3 |
Monoclinic, P21/n | Cu Kα radiation, λ = 1.54184 Å |
Hall symbol: -P 2yn | Cell parameters from 2386 reflections |
a = 12.7770 (3) Å | θ = 3.5–76.4° |
b = 5.1384 (1) Å | µ = 2.23 mm−1 |
c = 19.0973 (4) Å | T = 100 K |
β = 91.814 (2)° | Prism, colourless |
V = 1253.17 (5) Å3 | 0.35 × 0.15 × 0.05 mm |
Z = 4 |
Agilent SuperNova Dual diffractometer with an Atlas detector | 2576 independent reflections |
Radiation source: SuperNova (Cu) X-ray Source | 2348 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.016 |
Detector resolution: 10.4041 pixels mm-1 | θmax = 76.6°, θmin = 4.1° |
ω scan | h = −15→16 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | k = −5→6 |
Tmin = 0.967, Tmax = 0.998 | l = −14→24 |
4636 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.098 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0613P)2 + 0.3083P] where P = (Fo2 + 2Fc2)/3 |
2576 reflections | (Δ/σ)max = 0.001 |
177 parameters | Δρmax = 0.25 e Å−3 |
0 restraints | Δρmin = −0.25 e Å−3 |
C15H12N2OS | V = 1253.17 (5) Å3 |
Mr = 268.33 | Z = 4 |
Monoclinic, P21/n | Cu Kα radiation |
a = 12.7770 (3) Å | µ = 2.23 mm−1 |
b = 5.1384 (1) Å | T = 100 K |
c = 19.0973 (4) Å | 0.35 × 0.15 × 0.05 mm |
β = 91.814 (2)° |
Agilent SuperNova Dual diffractometer with an Atlas detector | 2576 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | 2348 reflections with I > 2σ(I) |
Tmin = 0.967, Tmax = 0.998 | Rint = 0.016 |
4636 measured reflections |
R[F2 > 2σ(F2)] = 0.033 | 0 restraints |
wR(F2) = 0.098 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.25 e Å−3 |
2576 reflections | Δρmin = −0.25 e Å−3 |
177 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.56616 (3) | 0.52832 (7) | 0.394981 (16) | 0.01717 (12) | |
O1 | 0.35822 (8) | −0.1192 (2) | 0.25706 (5) | 0.0181 (2) | |
N1 | 0.45653 (9) | 0.1596 (2) | 0.32532 (6) | 0.0149 (2) | |
H1n | 0.4357 (15) | 0.305 (4) | 0.4827 (11) | 0.029 (5)* | |
N2 | 0.42228 (9) | 0.2138 (2) | 0.44293 (6) | 0.0161 (2) | |
C1 | 0.37571 (11) | −0.0266 (3) | 0.31493 (7) | 0.0150 (3) | |
C2 | 0.31942 (10) | −0.0982 (3) | 0.37768 (7) | 0.0156 (3) | |
C3 | 0.24261 (10) | −0.2920 (3) | 0.37432 (7) | 0.0173 (3) | |
H3 | 0.2250 | −0.3722 | 0.3307 | 0.021* | |
C4 | 0.19179 (11) | −0.3686 (3) | 0.43408 (7) | 0.0182 (3) | |
C5 | 0.22073 (11) | −0.2484 (3) | 0.49797 (7) | 0.0195 (3) | |
H5 | 0.1871 | −0.3001 | 0.5394 | 0.023* | |
C6 | 0.29690 (11) | −0.0568 (3) | 0.50213 (7) | 0.0179 (3) | |
H6 | 0.3156 | 0.0210 | 0.5459 | 0.021* | |
C7 | 0.34592 (11) | 0.0206 (3) | 0.44129 (7) | 0.0156 (3) | |
C9 | 0.47714 (10) | 0.2888 (3) | 0.38744 (7) | 0.0149 (3) | |
C8 | 0.10873 (12) | −0.5770 (3) | 0.42997 (8) | 0.0229 (3) | |
H8A | 0.1314 | −0.7176 | 0.3993 | 0.034* | |
H8B | 0.0432 | −0.5024 | 0.4110 | 0.034* | |
H8C | 0.0976 | −0.6465 | 0.4769 | 0.034* | |
C10 | 0.52338 (10) | 0.2014 (3) | 0.26589 (7) | 0.0154 (3) | |
C11 | 0.60838 (11) | 0.0364 (3) | 0.25902 (8) | 0.0188 (3) | |
H11 | 0.6233 | −0.0942 | 0.2931 | 0.023* | |
C12 | 0.67148 (12) | 0.0652 (3) | 0.20130 (8) | 0.0208 (3) | |
H12 | 0.7303 | −0.0452 | 0.1959 | 0.025* | |
C13 | 0.64818 (11) | 0.2554 (3) | 0.15178 (7) | 0.0208 (3) | |
H13 | 0.6910 | 0.2746 | 0.1124 | 0.025* | |
C14 | 0.56249 (12) | 0.4182 (3) | 0.15946 (7) | 0.0217 (3) | |
H14 | 0.5471 | 0.5485 | 0.1254 | 0.026* | |
C15 | 0.49894 (11) | 0.3912 (3) | 0.21705 (7) | 0.0193 (3) | |
H15 | 0.4400 | 0.5013 | 0.2225 | 0.023* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0194 (2) | 0.01951 (19) | 0.01264 (19) | −0.00399 (12) | 0.00160 (13) | −0.00051 (12) |
O1 | 0.0211 (5) | 0.0210 (5) | 0.0122 (5) | −0.0004 (4) | −0.0006 (4) | −0.0024 (4) |
N1 | 0.0169 (5) | 0.0178 (6) | 0.0102 (5) | −0.0002 (4) | 0.0019 (4) | −0.0005 (4) |
N2 | 0.0189 (6) | 0.0194 (6) | 0.0101 (5) | −0.0025 (5) | 0.0016 (4) | −0.0016 (5) |
C1 | 0.0154 (6) | 0.0161 (6) | 0.0136 (6) | 0.0029 (5) | −0.0003 (5) | 0.0006 (5) |
C2 | 0.0156 (6) | 0.0179 (6) | 0.0132 (6) | 0.0015 (5) | 0.0007 (5) | 0.0012 (5) |
C3 | 0.0168 (6) | 0.0197 (7) | 0.0153 (6) | 0.0001 (5) | −0.0004 (5) | −0.0009 (5) |
C4 | 0.0158 (6) | 0.0190 (7) | 0.0199 (7) | 0.0012 (5) | 0.0008 (5) | 0.0013 (5) |
C5 | 0.0193 (6) | 0.0229 (7) | 0.0165 (6) | 0.0013 (5) | 0.0052 (5) | 0.0029 (6) |
C6 | 0.0201 (7) | 0.0212 (7) | 0.0125 (6) | 0.0008 (5) | 0.0023 (5) | −0.0002 (5) |
C7 | 0.0145 (6) | 0.0176 (6) | 0.0145 (6) | 0.0011 (5) | 0.0005 (5) | 0.0002 (5) |
C9 | 0.0155 (6) | 0.0163 (6) | 0.0129 (6) | 0.0015 (5) | 0.0002 (5) | 0.0004 (5) |
C8 | 0.0198 (7) | 0.0245 (7) | 0.0245 (7) | −0.0038 (6) | 0.0032 (6) | 0.0017 (6) |
C10 | 0.0176 (6) | 0.0183 (6) | 0.0103 (6) | −0.0027 (5) | 0.0026 (5) | −0.0021 (5) |
C11 | 0.0199 (7) | 0.0199 (7) | 0.0166 (7) | 0.0013 (5) | 0.0024 (5) | 0.0032 (5) |
C12 | 0.0187 (7) | 0.0225 (7) | 0.0213 (7) | 0.0011 (6) | 0.0056 (6) | −0.0005 (6) |
C13 | 0.0230 (7) | 0.0249 (7) | 0.0148 (6) | −0.0055 (6) | 0.0060 (5) | −0.0011 (6) |
C14 | 0.0283 (8) | 0.0220 (7) | 0.0148 (7) | −0.0007 (6) | 0.0024 (6) | 0.0051 (6) |
C15 | 0.0226 (7) | 0.0192 (7) | 0.0161 (6) | 0.0025 (6) | 0.0024 (5) | −0.0008 (6) |
S1—C9 | 1.6788 (14) | C6—C7 | 1.3953 (19) |
O1—C1 | 1.2175 (17) | C6—H6 | 0.9500 |
N1—C9 | 1.3776 (17) | C8—H8A | 0.9800 |
N1—C1 | 1.4171 (18) | C8—H8B | 0.9800 |
N1—C10 | 1.4578 (16) | C8—H8C | 0.9800 |
N2—C9 | 1.3454 (17) | C10—C15 | 1.379 (2) |
N2—C7 | 1.3913 (18) | C10—C11 | 1.388 (2) |
N2—H1n | 0.91 (2) | C11—C12 | 1.3940 (19) |
C1—C2 | 1.4639 (18) | C11—H11 | 0.9500 |
C2—C7 | 1.3918 (19) | C12—C13 | 1.386 (2) |
C2—C3 | 1.398 (2) | C12—H12 | 0.9500 |
C3—C4 | 1.3877 (19) | C13—C14 | 1.389 (2) |
C3—H3 | 0.9500 | C13—H13 | 0.9500 |
C4—C5 | 1.406 (2) | C14—C15 | 1.3945 (19) |
C4—C8 | 1.508 (2) | C14—H14 | 0.9500 |
C5—C6 | 1.385 (2) | C15—H15 | 0.9500 |
C5—H5 | 0.9500 | ||
C9—N1—C1 | 124.38 (11) | N2—C9—N1 | 116.73 (12) |
C9—N1—C10 | 119.89 (11) | N2—C9—S1 | 120.73 (10) |
C1—N1—C10 | 115.66 (11) | N1—C9—S1 | 122.54 (10) |
C9—N2—C7 | 124.69 (12) | C4—C8—H8A | 109.5 |
C9—N2—H1n | 115.0 (13) | C4—C8—H8B | 109.5 |
C7—N2—H1n | 120.2 (13) | H8A—C8—H8B | 109.5 |
O1—C1—N1 | 120.20 (12) | C4—C8—H8C | 109.5 |
O1—C1—C2 | 124.34 (13) | H8A—C8—H8C | 109.5 |
N1—C1—C2 | 115.45 (12) | H8B—C8—H8C | 109.5 |
C7—C2—C3 | 120.25 (12) | C15—C10—C11 | 121.98 (12) |
C7—C2—C1 | 119.46 (13) | C15—C10—N1 | 120.36 (12) |
C3—C2—C1 | 120.24 (12) | C11—C10—N1 | 117.59 (12) |
C4—C3—C2 | 120.66 (13) | C10—C11—C12 | 118.93 (13) |
C4—C3—H3 | 119.7 | C10—C11—H11 | 120.5 |
C2—C3—H3 | 119.7 | C12—C11—H11 | 120.5 |
C3—C4—C5 | 118.17 (13) | C13—C12—C11 | 119.84 (14) |
C3—C4—C8 | 120.35 (13) | C13—C12—H12 | 120.1 |
C5—C4—C8 | 121.48 (13) | C11—C12—H12 | 120.1 |
C6—C5—C4 | 121.79 (13) | C12—C13—C14 | 120.37 (13) |
C6—C5—H5 | 119.1 | C12—C13—H13 | 119.8 |
C4—C5—H5 | 119.1 | C14—C13—H13 | 119.8 |
C5—C6—C7 | 119.22 (13) | C13—C14—C15 | 120.25 (13) |
C5—C6—H6 | 120.4 | C13—C14—H14 | 119.9 |
C7—C6—H6 | 120.4 | C15—C14—H14 | 119.9 |
N2—C7—C2 | 118.93 (12) | C10—C15—C14 | 118.62 (13) |
N2—C7—C6 | 121.17 (13) | C10—C15—H15 | 120.7 |
C2—C7—C6 | 119.90 (13) | C14—C15—H15 | 120.7 |
C9—N1—C1—O1 | 175.07 (13) | C5—C6—C7—N2 | 179.51 (13) |
C10—N1—C1—O1 | −7.96 (18) | C5—C6—C7—C2 | −1.2 (2) |
C9—N1—C1—C2 | −6.19 (19) | C7—N2—C9—N1 | −1.3 (2) |
C10—N1—C1—C2 | 170.77 (11) | C7—N2—C9—S1 | 178.88 (10) |
O1—C1—C2—C7 | −179.92 (13) | C1—N1—C9—N2 | 6.2 (2) |
N1—C1—C2—C7 | 1.40 (19) | C10—N1—C9—N2 | −170.65 (12) |
O1—C1—C2—C3 | 2.7 (2) | C1—N1—C9—S1 | −173.97 (10) |
N1—C1—C2—C3 | −176.00 (12) | C10—N1—C9—S1 | 9.18 (18) |
C7—C2—C3—C4 | 0.0 (2) | C9—N1—C10—C15 | −91.74 (16) |
C1—C2—C3—C4 | 177.40 (13) | C1—N1—C10—C15 | 91.15 (16) |
C2—C3—C4—C5 | −0.9 (2) | C9—N1—C10—C11 | 91.23 (16) |
C2—C3—C4—C8 | 179.76 (13) | C1—N1—C10—C11 | −85.88 (15) |
C3—C4—C5—C6 | 0.6 (2) | C15—C10—C11—C12 | 0.6 (2) |
C8—C4—C5—C6 | −179.97 (13) | N1—C10—C11—C12 | 177.61 (13) |
C4—C5—C6—C7 | 0.4 (2) | C10—C11—C12—C13 | −0.5 (2) |
C9—N2—C7—C2 | −3.2 (2) | C11—C12—C13—C14 | 0.2 (2) |
C9—N2—C7—C6 | 176.10 (13) | C12—C13—C14—C15 | −0.2 (2) |
C3—C2—C7—N2 | −179.69 (12) | C11—C10—C15—C14 | −0.6 (2) |
C1—C2—C7—N2 | 2.9 (2) | N1—C10—C15—C14 | −177.45 (13) |
C3—C2—C7—C6 | 1.0 (2) | C13—C14—C15—C10 | 0.3 (2) |
C1—C2—C7—C6 | −176.36 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1n···S1i | 0.91 (2) | 2.49 (2) | 3.3662 (12) | 163.6 (17) |
C3—H3···O1ii | 0.95 | 2.33 | 3.2522 (17) | 163 |
C11—H11···S1iii | 0.95 | 2.86 | 3.7333 (16) | 154 |
C15—H15···O1iv | 0.95 | 2.32 | 3.1988 (18) | 154 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1/2, y−1/2, −z+1/2; (iii) x, y−1, z; (iv) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | C15H12N2OS |
Mr | 268.33 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 100 |
a, b, c (Å) | 12.7770 (3), 5.1384 (1), 19.0973 (4) |
β (°) | 91.814 (2) |
V (Å3) | 1253.17 (5) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 2.23 |
Crystal size (mm) | 0.35 × 0.15 × 0.05 |
Data collection | |
Diffractometer | Agilent SuperNova Dual diffractometer with an Atlas detector |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2011) |
Tmin, Tmax | 0.967, 0.998 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4636, 2576, 2348 |
Rint | 0.016 |
(sin θ/λ)max (Å−1) | 0.631 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.033, 0.098, 1.06 |
No. of reflections | 2576 |
No. of parameters | 177 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.25, −0.25 |
Computer programs: CrysAlis PRO (Agilent, 2011), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1n···S1i | 0.91 (2) | 2.49 (2) | 3.3662 (12) | 163.6 (17) |
C3—H3···O1ii | 0.95 | 2.33 | 3.2522 (17) | 163 |
C11—H11···S1iii | 0.95 | 2.86 | 3.7333 (16) | 154 |
C15—H15···O1iv | 0.95 | 2.32 | 3.1988 (18) | 154 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1/2, y−1/2, −z+1/2; (iii) x, y−1, z; (iv) x, y+1, z. |
Footnotes
‡Additional correspondence author, e-mail: adelazaba@yahoo.com.
Acknowledgements
This work was supported by the Research Center of Pharmacy, King Saud University, Riyadh, Saudi Arabia. We also thank the Ministry of Higher Education (Malaysia) for funding structural studies through the High-Impact Research scheme (UM.C/HIR/MOHE/SC/12).
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Quinazoline-4(3H)-one derivatives are known for their various biological activities (El-Azab & El-Tahir, 2012; El-Azab et al. (2011, 2010). The title compound (I) has been investigated previously for its anti-microbial activity (Al-Omar et al., 2004). Herein, its crystal and molecular structure is described.
The key result of the crystal structure determination of (I), Fig. 1, is the confirmation that the compound exists as the thione tautomer in the solid-state. The non-hydrogen atoms comprising the fused ring system, including the exocyclic atoms, are co-planar with a r.m.s. deviation = 0.036 Å. The maximum deviations from the least-squares plane through these atoms are 0.038 (1) Å for the S1 atom and -0.085 (1) Å for N1, consistent with some pyramidal character for the latter atom. The phenyl group is almost perpendicular to the aforementioned plane: the dihedral angle = 87.96 (5)°.
The presence of the thione tautomer confirms the results of previous structure determinations on related compounds (Bowman et al., 2007; Hashim et al., 2010).
The key feature of the crystal packing is the formation of N—H···S hydrogen bonds between centrosymmetrically related molecules, Table 1. The dimeric aggregates thus formed are connected into layers parallel to (1 0 1) by C—H···O interactions, involving the bifurcated carbonyl-O atom, and C—H···S interactions, Fig. 2 and Table 1. Layers stack with no specific intermolecular interactions between them, Fig. 3.