organic compounds
N-(2,2-Dimethylpropanoyl)-N′-(2-methoxyphenyl)thiourea
aDepartment of Chemical Sciences, Faculty of Science and Technology, Universiti Malaysia Terengganu, 21030 Kuala Terengganu, Terengganu, Malaysia, and bDepartment of Chemical Sciences and Food Technology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43650 Bangi, Selangor, Malaysia
*Correspondence e-mail: mohdsukeri@umt.edu.my
In the title compound, C13H18N2O2S, the carbonylthiourea fragment is nearly planar with an r.m.s. deviation of 0.0096 Å. The dihedral angle between carbonylthiourea group and the benzene ring is 19.16 (16)°. There are two intramolecular N—H⋯O hydrogen bonds, which lead to two pseudo-six-membered rings. Weak intramolecular C—H⋯S hydrogen bonding also occurs.
Related literature
For related structures, see: Saeed & Flörke (2007); Yusof et al. (2008); Shoukat et al. (2007). For standard bond lengths, see: Allen et al. (1987).
Experimental
Crystal data
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Data collection: SMART (Bruker, 2000); cell SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PARST (Nardelli, 1995).
Supporting information
10.1107/S1600536812010914/bq2346sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812010914/bq2346Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812010914/bq2346Isup3.cml
To a stirring acetone solution (75 ml) of pivaloyl chloride (5.0 g, 0.04 mol) and ammonium thiocyanate (3.15 g, 0.04 mol), 2-methoxyaniline (0.49 g, 0.04 mol) in 40 ml of acetone was added dropwise. The solution mixture was refluxed for 1 h. The resulting solution was poured into a beaker containing some ice blocks. The white precipitate was filtered off and washed with distilled water and cold ethanol before being dried under vacuum. Good quality crystals were obtained by recrystallization from DMF.
H atoms on C were positioned geometrically with C—H 0.93, 0.96 Å, for aromatic and methyl H atoms, respectively, and constrained to ride on their parent atoms with Uiso(H)= xUeq(C) where x=1.5 for methyl H and x=1.2 for aromatic H atoms. The H atom attached to oxygen atoms were located from the Fourier difference map and refined isotropically.
The title compound is analogous to the previously reported, 1-(2-Nitrophenyl)-3-pivaloylthiourea (Saeed and Flörke, 2007) except that the nitro group is replace with methoxy group (Fig. 1). The bond lengths are in normal ranges (Allen et al., 1987) and comparable with other similar molecule reported (Yusof et al. 2008; Shoukat et al. 2007).
The carbonylthiourea (S1/N1/N2/O1/C4–C7) and phenyl fragments are essentially planar, with rms deviations of 0.0096 Å and 0.0064 Å, respectively. These two fragments inclined at each other at an angle of 19.16(0.16)°. There are two intramolecular hydrogen bonds, N2—H2A···O1 and N2—H2A···O2 leading to two pseudo-six membered rings. Weak C-H···S intramolecular H-bonding is also exist. There is no intermolecular hydrogen bond in the crystal structure.
For related structures, see: Saeed & Flörke (2007); Yusof et al. (2008); Shoukat et al. (2007). For standard bond lengths, see: Allen et al. (1987).
Data collection: SMART (Bruker, 2000); cell
SAINT (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PARST (Nardelli, 1995).Fig. 1. The molecular structure of (I), with displacement ellipsoids drawn at the 50% probability level. Dashed lines show H-bondings. |
C13H18N2O2S | F(000) = 568 |
Mr = 266.35 | Dx = 1.259 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 770 reflections |
a = 5.9181 (10) Å | θ = 1.9–26.0° |
b = 13.492 (2) Å | µ = 0.23 mm−1 |
c = 17.592 (3) Å | T = 273 K |
V = 1404.7 (4) Å3 | Slab, colourless |
Z = 4 | 0.50 × 0.14 × 0.09 mm |
Bruker SMART APEX CCD area-detector diffractometer | 2763 independent reflections |
Radiation source: fine-focus sealed tube | 2227 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.045 |
Detector resolution: 83.66 pixels mm-1 | θmax = 26.0°, θmin = 1.9° |
ω scan | h = −7→6 |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | k = −16→16 |
Tmin = 0.895, Tmax = 0.980 | l = −20→21 |
8711 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.068 | H-atom parameters constrained |
wR(F2) = 0.147 | w = 1/[σ2(Fo2) + (0.0655P)2 + 0.2181P] where P = (Fo2 + 2Fc2)/3 |
S = 1.13 | (Δ/σ)max < 0.001 |
2763 reflections | Δρmax = 0.32 e Å−3 |
163 parameters | Δρmin = −0.18 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 1141 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.63 (15) |
C13H18N2O2S | V = 1404.7 (4) Å3 |
Mr = 266.35 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 5.9181 (10) Å | µ = 0.23 mm−1 |
b = 13.492 (2) Å | T = 273 K |
c = 17.592 (3) Å | 0.50 × 0.14 × 0.09 mm |
Bruker SMART APEX CCD area-detector diffractometer | 2763 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | 2227 reflections with I > 2σ(I) |
Tmin = 0.895, Tmax = 0.980 | Rint = 0.045 |
8711 measured reflections |
R[F2 > 2σ(F2)] = 0.068 | H-atom parameters constrained |
wR(F2) = 0.147 | Δρmax = 0.32 e Å−3 |
S = 1.13 | Δρmin = −0.18 e Å−3 |
2763 reflections | Absolute structure: Flack (1983), 1141 Friedel pairs |
163 parameters | Absolute structure parameter: 0.63 (15) |
0 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.1312 (2) | 0.79180 (7) | 0.57763 (7) | 0.0693 (4) | |
O1 | 0.3640 (5) | 0.47260 (17) | 0.56305 (13) | 0.0559 (7) | |
O2 | 0.7537 (5) | 0.5571 (2) | 0.67865 (15) | 0.0662 (8) | |
C6 | 0.2391 (6) | 0.6781 (2) | 0.58348 (19) | 0.0442 (8) | |
N2 | 0.3935 (5) | 0.6446 (2) | 0.63138 (15) | 0.0453 (7) | |
H2A | 0.4306 | 0.5836 | 0.6243 | 0.054* | |
N1 | 0.1602 (5) | 0.60835 (18) | 0.53095 (15) | 0.0427 (7) | |
H1A | 0.0573 | 0.6290 | 0.5003 | 0.051* | |
C5 | 0.2250 (6) | 0.5112 (2) | 0.52178 (18) | 0.0384 (8) | |
C8 | 0.7025 (7) | 0.6429 (3) | 0.71748 (19) | 0.0474 (9) | |
C9 | 0.8272 (8) | 0.6805 (3) | 0.7766 (2) | 0.0623 (11) | |
H9A | 0.9588 | 0.6489 | 0.7924 | 0.075* | |
C4 | 0.1096 (6) | 0.4544 (2) | 0.45732 (18) | 0.0445 (8) | |
C7 | 0.5083 (7) | 0.6910 (2) | 0.69201 (17) | 0.0434 (9) | |
C3 | 0.2134 (8) | 0.3508 (3) | 0.4531 (2) | 0.0682 (12) | |
H3A | 0.1901 | 0.3171 | 0.5005 | 0.102* | |
H3B | 0.3724 | 0.3562 | 0.4432 | 0.102* | |
H3C | 0.1427 | 0.3140 | 0.4128 | 0.102* | |
C2 | 0.1488 (9) | 0.5089 (3) | 0.3823 (2) | 0.0726 (13) | |
H2B | 0.0831 | 0.5738 | 0.3850 | 0.109* | |
H2C | 0.0798 | 0.4724 | 0.3416 | 0.109* | |
H2D | 0.3082 | 0.5146 | 0.3731 | 0.109* | |
C12 | 0.4381 (8) | 0.7757 (3) | 0.7293 (2) | 0.0599 (12) | |
H12A | 0.3061 | 0.8075 | 0.7142 | 0.072* | |
C11 | 0.5629 (10) | 0.8133 (3) | 0.7888 (2) | 0.0731 (15) | |
H11A | 0.5165 | 0.8711 | 0.8129 | 0.088* | |
C10 | 0.7544 (9) | 0.7660 (3) | 0.8125 (2) | 0.0714 (14) | |
H10A | 0.8365 | 0.7915 | 0.8532 | 0.086* | |
C13 | 0.9241 (8) | 0.4949 (3) | 0.7089 (2) | 0.0744 (13) | |
H13A | 0.9422 | 0.4379 | 0.6769 | 0.112* | |
H13B | 0.8817 | 0.4740 | 0.7591 | 0.112* | |
H13C | 1.0642 | 0.5307 | 0.7113 | 0.112* | |
C1 | −0.1417 (7) | 0.4454 (3) | 0.4742 (3) | 0.0734 (12) | |
H1B | −0.2072 | 0.5103 | 0.4777 | 0.110* | |
H1C | −0.1626 | 0.4110 | 0.5215 | 0.110* | |
H1D | −0.2141 | 0.4090 | 0.4341 | 0.110* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0848 (8) | 0.0424 (5) | 0.0806 (7) | 0.0145 (6) | −0.0263 (7) | −0.0102 (5) |
O1 | 0.0650 (17) | 0.0465 (13) | 0.0562 (14) | 0.0105 (13) | −0.0175 (14) | −0.0061 (11) |
O2 | 0.068 (2) | 0.0701 (18) | 0.0609 (15) | 0.0127 (16) | −0.0192 (15) | −0.0080 (14) |
C6 | 0.045 (2) | 0.0429 (18) | 0.0448 (18) | −0.0036 (16) | 0.0009 (18) | 0.0016 (15) |
N2 | 0.0535 (19) | 0.0360 (14) | 0.0465 (16) | 0.0025 (14) | −0.0089 (15) | −0.0053 (12) |
N1 | 0.0445 (17) | 0.0396 (15) | 0.0440 (15) | 0.0033 (13) | −0.0109 (14) | −0.0057 (12) |
C5 | 0.0366 (19) | 0.0403 (17) | 0.0385 (17) | −0.0044 (15) | 0.0033 (15) | 0.0015 (14) |
C8 | 0.054 (2) | 0.048 (2) | 0.0405 (18) | −0.0111 (18) | −0.0028 (17) | 0.0069 (16) |
C9 | 0.061 (3) | 0.074 (3) | 0.051 (2) | −0.020 (2) | −0.010 (2) | 0.008 (2) |
C4 | 0.039 (2) | 0.0484 (19) | 0.0462 (19) | −0.0020 (17) | 0.0003 (16) | −0.0068 (15) |
C7 | 0.057 (2) | 0.0386 (18) | 0.0351 (18) | −0.0119 (18) | −0.0021 (17) | 0.0025 (14) |
C3 | 0.074 (3) | 0.057 (2) | 0.074 (3) | 0.002 (2) | −0.016 (2) | −0.027 (2) |
C2 | 0.100 (4) | 0.078 (3) | 0.039 (2) | −0.011 (3) | −0.004 (2) | −0.0070 (19) |
C12 | 0.085 (3) | 0.050 (2) | 0.045 (2) | −0.007 (2) | −0.003 (2) | −0.0055 (17) |
C11 | 0.119 (5) | 0.050 (2) | 0.050 (2) | −0.015 (3) | −0.002 (3) | −0.0072 (18) |
C10 | 0.100 (4) | 0.068 (3) | 0.046 (2) | −0.041 (3) | −0.016 (3) | 0.000 (2) |
C13 | 0.063 (3) | 0.088 (3) | 0.073 (3) | 0.012 (2) | −0.007 (2) | 0.008 (2) |
C1 | 0.051 (3) | 0.080 (3) | 0.090 (3) | −0.014 (2) | −0.002 (2) | −0.021 (2) |
S1—C6 | 1.665 (3) | C7—C12 | 1.382 (5) |
O1—C5 | 1.215 (4) | C3—H3A | 0.9600 |
O2—C8 | 1.378 (5) | C3—H3B | 0.9600 |
O2—C13 | 1.416 (5) | C3—H3C | 0.9600 |
C6—N2 | 1.323 (4) | C2—H2B | 0.9600 |
C6—N1 | 1.399 (4) | C2—H2C | 0.9600 |
N2—C7 | 1.411 (4) | C2—H2D | 0.9600 |
N2—H2A | 0.8600 | C12—C11 | 1.378 (6) |
N1—C5 | 1.375 (4) | C12—H12A | 0.9300 |
N1—H1A | 0.8600 | C11—C10 | 1.366 (7) |
C5—C4 | 1.530 (5) | C11—H11A | 0.9300 |
C8—C9 | 1.373 (5) | C10—H10A | 0.9300 |
C8—C7 | 1.394 (5) | C13—H13A | 0.9600 |
C9—C10 | 1.385 (6) | C13—H13B | 0.9600 |
C9—H9A | 0.9300 | C13—H13C | 0.9600 |
C4—C1 | 1.522 (5) | C1—H1B | 0.9600 |
C4—C2 | 1.529 (5) | C1—H1C | 0.9600 |
C4—C3 | 1.529 (5) | C1—H1D | 0.9600 |
C8—O2—C13 | 117.9 (3) | C4—C3—H3C | 109.5 |
N2—C6—N1 | 114.9 (3) | H3A—C3—H3C | 109.5 |
N2—C6—S1 | 128.3 (3) | H3B—C3—H3C | 109.5 |
N1—C6—S1 | 116.8 (3) | C4—C2—H2B | 109.5 |
C6—N2—C7 | 131.5 (3) | C4—C2—H2C | 109.5 |
C6—N2—H2A | 114.3 | H2B—C2—H2C | 109.5 |
C7—N2—H2A | 114.3 | C4—C2—H2D | 109.5 |
C5—N1—C6 | 128.7 (3) | H2B—C2—H2D | 109.5 |
C5—N1—H1A | 115.7 | H2C—C2—H2D | 109.5 |
C6—N1—H1A | 115.7 | C11—C12—C7 | 120.2 (4) |
O1—C5—N1 | 121.9 (3) | C11—C12—H12A | 119.9 |
O1—C5—C4 | 122.0 (3) | C7—C12—H12A | 119.9 |
N1—C5—C4 | 116.1 (3) | C10—C11—C12 | 120.4 (4) |
C9—C8—O2 | 124.6 (4) | C10—C11—H11A | 119.8 |
C9—C8—C7 | 121.0 (4) | C12—C11—H11A | 119.8 |
O2—C8—C7 | 114.4 (3) | C11—C10—C9 | 120.5 (4) |
C8—C9—C10 | 119.1 (4) | C11—C10—H10A | 119.7 |
C8—C9—H9A | 120.5 | C9—C10—H10A | 119.7 |
C10—C9—H9A | 120.5 | O2—C13—H13A | 109.5 |
C1—C4—C2 | 110.8 (4) | O2—C13—H13B | 109.5 |
C1—C4—C3 | 109.2 (3) | H13A—C13—H13B | 109.5 |
C2—C4—C3 | 109.6 (3) | O2—C13—H13C | 109.5 |
C1—C4—C5 | 109.4 (3) | H13A—C13—H13C | 109.5 |
C2—C4—C5 | 109.4 (3) | H13B—C13—H13C | 109.5 |
C3—C4—C5 | 108.4 (3) | C4—C1—H1B | 109.5 |
C12—C7—C8 | 118.7 (3) | C4—C1—H1C | 109.5 |
C12—C7—N2 | 125.5 (4) | H1B—C1—H1C | 109.5 |
C8—C7—N2 | 115.7 (3) | C4—C1—H1D | 109.5 |
C4—C3—H3A | 109.5 | H1B—C1—H1D | 109.5 |
C4—C3—H3B | 109.5 | H1C—C1—H1D | 109.5 |
H3A—C3—H3B | 109.5 | ||
N1—C6—N2—C7 | −178.8 (3) | O1—C5—C4—C3 | −4.2 (5) |
S1—C6—N2—C7 | 2.0 (6) | N1—C5—C4—C3 | 176.6 (3) |
N2—C6—N1—C5 | −1.5 (5) | C9—C8—C7—C12 | −2.3 (5) |
S1—C6—N1—C5 | 177.9 (3) | O2—C8—C7—C12 | 177.6 (3) |
C6—N1—C5—O1 | 2.2 (5) | C9—C8—C7—N2 | −179.4 (3) |
C6—N1—C5—C4 | −178.6 (3) | O2—C8—C7—N2 | 0.5 (4) |
C13—O2—C8—C9 | 10.6 (5) | C6—N2—C7—C12 | 19.9 (6) |
C13—O2—C8—C7 | −169.3 (3) | C6—N2—C7—C8 | −163.3 (3) |
O2—C8—C9—C10 | −178.1 (3) | C8—C7—C12—C11 | 2.2 (6) |
C7—C8—C9—C10 | 1.7 (5) | N2—C7—C12—C11 | 178.9 (3) |
O1—C5—C4—C1 | 114.7 (4) | C7—C12—C11—C10 | −1.4 (6) |
N1—C5—C4—C1 | −64.5 (4) | C12—C11—C10—C9 | 0.8 (6) |
O1—C5—C4—C2 | −123.7 (4) | C8—C9—C10—C11 | −1.0 (6) |
N1—C5—C4—C2 | 57.1 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O1 | 0.86 | 1.89 | 2.619 (4) | 142 |
N2—H2A···O2 | 0.86 | 2.17 | 2.575 (4) | 109 |
C12—H12A···S1 | 0.93 | 2.62 | 3.235 (4) | 124 |
Experimental details
Crystal data | |
Chemical formula | C13H18N2O2S |
Mr | 266.35 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 273 |
a, b, c (Å) | 5.9181 (10), 13.492 (2), 17.592 (3) |
V (Å3) | 1404.7 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.23 |
Crystal size (mm) | 0.50 × 0.14 × 0.09 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2000) |
Tmin, Tmax | 0.895, 0.980 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8711, 2763, 2227 |
Rint | 0.045 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.068, 0.147, 1.13 |
No. of reflections | 2763 |
No. of parameters | 163 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.32, −0.18 |
Absolute structure | Flack (1983), 1141 Friedel pairs |
Absolute structure parameter | 0.63 (15) |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SHELXTL (Sheldrick, 2008) and PARST (Nardelli, 1995).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O1 | 0.86 | 1.89 | 2.619 (4) | 142 |
N2—H2A···O2 | 0.86 | 2.17 | 2.575 (4) | 109 |
C12—H12A···S1 | 0.93 | 2.62 | 3.235 (4) | 124 |
Acknowledgements
The authors wish to thank both Universiti Malaysia Terengganu and Universiti Kebangsaan Malaysia for the research facilities and the Ministry of Higher Education Malaysia for the research grant FRGS 59178.
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19. CSD CrossRef Web of Science Google Scholar
Bruker (2000). SADABS, SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Nardelli, M. (1995). J. Appl. Cryst. 28, 659. CrossRef IUCr Journals Google Scholar
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The title compound is analogous to the previously reported, 1-(2-Nitrophenyl)-3-pivaloylthiourea (Saeed and Flörke, 2007) except that the nitro group is replace with methoxy group (Fig. 1). The bond lengths are in normal ranges (Allen et al., 1987) and comparable with other similar molecule reported (Yusof et al. 2008; Shoukat et al. 2007).
The carbonylthiourea (S1/N1/N2/O1/C4–C7) and phenyl fragments are essentially planar, with rms deviations of 0.0096 Å and 0.0064 Å, respectively. These two fragments inclined at each other at an angle of 19.16(0.16)°. There are two intramolecular hydrogen bonds, N2—H2A···O1 and N2—H2A···O2 leading to two pseudo-six membered rings. Weak C-H···S intramolecular H-bonding is also exist. There is no intermolecular hydrogen bond in the crystal structure.