organic compounds
3-Acetyl-1-(3-chlorophenyl)thiourea
aDepartment of Chemistry, Government College University, Lahore, Pakistan, bUniversity of Sargodha, Department of Physics, Sargodha, Pakistan, and cDepartment of Chemistry, University of Gujrat, Gujrat, Pakistan
*Correspondence e-mail: dmntahir_uos@yahoo.com
In the title compound, C9H9ClN2OS, the 3-chlorophenyl and acetylthiourea fragments are oriented at a dihedral angle of 62.68 (5)°. An intramolecular N—H⋯O hydrogen bond generates an S(6) ring motif. Molecules are linked into dimers via a cyclic R22(8) motif of N—H⋯S hydrogen bonds. These dimers are further connected through C—H⋯S interactions, completing an R22(12) motif, into chains along [010].
Related literature
For related structures, see: Shahwar et al. (2012a,b).; For graph-set notation, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON.
Supporting information
10.1107/S1600536812012147/gk2470sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812012147/gk2470Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812012147/gk2470Isup3.cml
The title compound was synthesized by adding (0.1 mol, 7.13 ml) of acetylchloride dropwise to a stirred solution of KSCN (0.11 mol) in dry acetone (50 ml), followed by slow addition of 3-chloroaniline (0.1 mol) in dry acetone (25 ml). The mixture was refluxed for 5–10 min, then poured on ice cooled water, which resulted in crude precipitate. Recrystallization of the precipitate from ethyl acetate yielded colorless rods (m.p. 374 K).
The H atoms were positioned geometrically (C—H = 0.93–0.96 Å, N—H = 0.86 Å) and refined as riding with Uiso(H) = xUeq(C, N), where x = 1.5 for methyl groups and x = 1.2 for other H atoms.
The title compound (Fig. 1) has been synthesized as a continuation of our work to find new enzyme inhibitors.
The crystal structures of N-(2-methylphenylcarbamothioyl)acetamide (Shahwar et al., 2012a) and N-(phenylcarbamothioyl)acetamide (Shahwar et al., 2012b) have been reported which are related to the title compound.
In the title compound, the 3-chlorophenyl group A (C1–C6/Cl1) and the N-carbamothioylacetamide moiety B (N1/C7/S1/N2/C8/O1/C9) are planar with r. m. s. deviation of 0.0055 Å and 0.0060 Å, respectively. The dihedral angle between A/B is 62.68 (5)°. There exist intramolecular H–bonding of N—H···O type (Table 1, Fig. 1) with S(6) ring motif (Bernstein et al., 1995). The molecules are dimerized due to N—H···S type of hydrogen bonds with R22(8) ring motifs (Table 1, Fig. 2). The dimers are interlinked due to C—H···S H–bondings (Table 1, Fig. 2) and complete R22(12) ring motifs.
For related structures, see: Shahwar et al. (2012a,b).; For graph-set notation, see: Bernstein et al. (1995).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).C9H9ClN2OS | F(000) = 944 |
Mr = 228.69 | Dx = 1.501 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 1464 reflections |
a = 28.3980 (14) Å | θ = 2.1–25.1° |
b = 4.1768 (2) Å | µ = 0.55 mm−1 |
c = 20.2635 (11) Å | T = 296 K |
β = 122.651 (2)° | Rod, colorless |
V = 2023.69 (18) Å3 | 0.35 × 0.22 × 0.22 mm |
Z = 8 |
Bruker Kappa APEXII CCD diffractometer | 1745 independent reflections |
Radiation source: fine-focus sealed tube | 1450 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
Detector resolution: 8.10 pixels mm-1 | θmax = 25.1°, θmin = 2.1° |
ω scans | h = −33→27 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −4→3 |
Tmin = 0.868, Tmax = 0.872 | l = −19→24 |
7045 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.109 | H-atom parameters constrained |
S = 1.11 | w = 1/[σ2(Fo2) + (0.0527P)2 + 1.9073P] where P = (Fo2 + 2Fc2)/3 |
1775 reflections | (Δ/σ)max < 0.001 |
128 parameters | Δρmax = 0.23 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
C9H9ClN2OS | V = 2023.69 (18) Å3 |
Mr = 228.69 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 28.3980 (14) Å | µ = 0.55 mm−1 |
b = 4.1768 (2) Å | T = 296 K |
c = 20.2635 (11) Å | 0.35 × 0.22 × 0.22 mm |
β = 122.651 (2)° |
Bruker Kappa APEXII CCD diffractometer | 1745 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 1450 reflections with I > 2σ(I) |
Tmin = 0.868, Tmax = 0.872 | Rint = 0.029 |
7045 measured reflections |
R[F2 > 2σ(F2)] = 0.034 | 0 restraints |
wR(F2) = 0.109 | H-atom parameters constrained |
S = 1.11 | Δρmax = 0.23 e Å−3 |
1775 reflections | Δρmin = −0.23 e Å−3 |
128 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.27943 (3) | 0.9289 (2) | 0.34233 (4) | 0.0593 (3) | |
S1 | 0.08011 (2) | 0.46913 (17) | 0.10724 (3) | 0.0436 (2) | |
O1 | −0.03091 (7) | 1.0496 (5) | 0.16023 (11) | 0.0610 (7) | |
N1 | 0.06728 (7) | 0.7792 (5) | 0.21108 (10) | 0.0383 (6) | |
N2 | −0.00930 (7) | 0.7704 (5) | 0.08375 (10) | 0.0353 (6) | |
C1 | 0.12315 (9) | 0.7158 (6) | 0.27507 (12) | 0.0334 (7) | |
C2 | 0.16843 (9) | 0.8388 (6) | 0.27522 (13) | 0.0375 (8) | |
C3 | 0.22127 (9) | 0.7785 (6) | 0.33950 (13) | 0.0375 (7) | |
C4 | 0.22942 (10) | 0.6054 (7) | 0.40248 (14) | 0.0461 (8) | |
C5 | 0.18373 (11) | 0.4900 (7) | 0.40138 (16) | 0.0520 (9) | |
C6 | 0.13025 (10) | 0.5409 (6) | 0.33725 (14) | 0.0422 (8) | |
C7 | 0.04606 (9) | 0.6845 (5) | 0.13794 (12) | 0.0328 (7) | |
C8 | −0.04474 (9) | 0.9441 (6) | 0.09596 (14) | 0.0395 (8) | |
C9 | −0.10196 (10) | 0.9910 (7) | 0.02487 (15) | 0.0480 (9) | |
H1 | 0.04591 | 0.88682 | 0.22087 | 0.0459* | |
H2 | −0.02292 | 0.70566 | 0.03650 | 0.0424* | |
H3 | 0.16340 | 0.95861 | 0.23319 | 0.0450* | |
H4 | 0.26537 | 0.56692 | 0.44526 | 0.0553* | |
H5 | 0.18883 | 0.37642 | 0.44424 | 0.0624* | |
H6 | 0.09947 | 0.45780 | 0.33622 | 0.0506* | |
H9A | −0.09942 | 1.10785 | −0.01390 | 0.0720* | |
H9B | −0.12438 | 1.10907 | 0.03877 | 0.0720* | |
H9C | −0.11887 | 0.78623 | 0.00402 | 0.0720* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0285 (4) | 0.0836 (6) | 0.0561 (5) | −0.0088 (3) | 0.0164 (3) | 0.0058 (4) |
S1 | 0.0301 (4) | 0.0600 (4) | 0.0331 (4) | 0.0091 (3) | 0.0120 (3) | −0.0070 (3) |
O1 | 0.0378 (11) | 0.0981 (16) | 0.0396 (11) | 0.0147 (10) | 0.0159 (9) | −0.0173 (10) |
N1 | 0.0223 (10) | 0.0590 (13) | 0.0290 (10) | 0.0031 (9) | 0.0109 (8) | −0.0061 (9) |
N2 | 0.0231 (9) | 0.0509 (12) | 0.0251 (10) | 0.0023 (8) | 0.0086 (8) | −0.0049 (8) |
C1 | 0.0248 (11) | 0.0434 (13) | 0.0262 (12) | 0.0014 (9) | 0.0099 (9) | −0.0051 (9) |
C2 | 0.0303 (13) | 0.0479 (14) | 0.0283 (12) | −0.0001 (10) | 0.0119 (10) | 0.0032 (10) |
C3 | 0.0250 (12) | 0.0480 (14) | 0.0334 (12) | −0.0038 (10) | 0.0117 (10) | −0.0051 (10) |
C4 | 0.0302 (13) | 0.0605 (16) | 0.0342 (14) | 0.0060 (11) | 0.0085 (11) | 0.0070 (12) |
C5 | 0.0439 (16) | 0.0684 (18) | 0.0374 (14) | 0.0033 (13) | 0.0178 (13) | 0.0173 (13) |
C6 | 0.0340 (14) | 0.0545 (15) | 0.0383 (14) | −0.0041 (11) | 0.0196 (11) | 0.0004 (11) |
C7 | 0.0242 (12) | 0.0400 (13) | 0.0298 (12) | −0.0014 (9) | 0.0116 (10) | −0.0003 (10) |
C8 | 0.0274 (13) | 0.0504 (15) | 0.0371 (14) | 0.0019 (10) | 0.0150 (11) | −0.0017 (11) |
C9 | 0.0304 (14) | 0.0653 (17) | 0.0412 (14) | 0.0124 (12) | 0.0146 (12) | −0.0002 (12) |
Cl1—C3 | 1.739 (3) | C3—C4 | 1.373 (4) |
S1—C7 | 1.667 (3) | C4—C5 | 1.373 (5) |
O1—C8 | 1.222 (3) | C5—C6 | 1.382 (4) |
N1—C1 | 1.431 (3) | C8—C9 | 1.493 (4) |
N1—C7 | 1.324 (3) | C2—H3 | 0.9300 |
N2—C7 | 1.394 (3) | C4—H4 | 0.9300 |
N2—C8 | 1.367 (4) | C5—H5 | 0.9300 |
N1—H1 | 0.8600 | C6—H6 | 0.9300 |
N2—H2 | 0.8600 | C9—H9A | 0.9600 |
C1—C6 | 1.374 (3) | C9—H9B | 0.9600 |
C1—C2 | 1.383 (4) | C9—H9C | 0.9600 |
C2—C3 | 1.379 (4) | ||
C1—N1—C7 | 124.9 (2) | N1—C7—N2 | 116.3 (2) |
C7—N2—C8 | 128.42 (19) | O1—C8—C9 | 122.5 (3) |
C1—N1—H1 | 118.00 | N2—C8—C9 | 114.8 (2) |
C7—N1—H1 | 118.00 | O1—C8—N2 | 122.7 (2) |
C7—N2—H2 | 116.00 | C1—C2—H3 | 121.00 |
C8—N2—H2 | 116.00 | C3—C2—H3 | 121.00 |
N1—C1—C2 | 120.5 (2) | C3—C4—H4 | 120.00 |
N1—C1—C6 | 118.1 (3) | C5—C4—H4 | 120.00 |
C2—C1—C6 | 121.3 (2) | C4—C5—H5 | 120.00 |
C1—C2—C3 | 118.1 (2) | C6—C5—H5 | 120.00 |
Cl1—C3—C4 | 118.6 (2) | C1—C6—H6 | 120.00 |
C2—C3—C4 | 121.7 (3) | C5—C6—H6 | 120.00 |
Cl1—C3—C2 | 119.68 (19) | C8—C9—H9A | 109.00 |
C3—C4—C5 | 119.1 (3) | C8—C9—H9B | 109.00 |
C4—C5—C6 | 120.7 (3) | C8—C9—H9C | 109.00 |
C1—C6—C5 | 119.2 (3) | H9A—C9—H9B | 109.00 |
S1—C7—N1 | 125.0 (2) | H9A—C9—H9C | 109.00 |
S1—C7—N2 | 118.65 (16) | H9B—C9—H9C | 109.00 |
C7—N1—C1—C2 | 63.5 (3) | C6—C1—C2—C3 | 0.6 (4) |
C7—N1—C1—C6 | −119.0 (3) | N1—C1—C6—C5 | −176.9 (2) |
C1—N1—C7—S1 | 1.1 (4) | C2—C1—C6—C5 | 0.6 (4) |
C1—N1—C7—N2 | −179.9 (2) | C1—C2—C3—Cl1 | −179.9 (2) |
C8—N2—C7—S1 | 179.9 (2) | C1—C2—C3—C4 | −0.8 (4) |
C8—N2—C7—N1 | 0.8 (4) | Cl1—C3—C4—C5 | 179.0 (2) |
C7—N2—C8—O1 | −0.3 (4) | C2—C3—C4—C5 | −0.1 (4) |
C7—N2—C8—C9 | −179.5 (2) | C3—C4—C5—C6 | 1.3 (4) |
N1—C1—C2—C3 | 178.0 (2) | C4—C5—C6—C1 | −1.6 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.86 | 1.96 | 2.648 (3) | 136 |
N2—H2···S1i | 0.86 | 2.56 | 3.4095 (18) | 170 |
C9—H9A···S1ii | 0.96 | 2.85 | 3.799 (3) | 170 |
Symmetry codes: (i) −x, −y+1, −z; (ii) −x, −y+2, −z. |
Experimental details
Crystal data | |
Chemical formula | C9H9ClN2OS |
Mr | 228.69 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 296 |
a, b, c (Å) | 28.3980 (14), 4.1768 (2), 20.2635 (11) |
β (°) | 122.651 (2) |
V (Å3) | 2023.69 (18) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.55 |
Crystal size (mm) | 0.35 × 0.22 × 0.22 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.868, 0.872 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7045, 1745, 1450 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.597 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.109, 1.11 |
No. of reflections | 1775 |
No. of parameters | 128 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.23 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009), WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.86 | 1.96 | 2.648 (3) | 136 |
N2—H2···S1i | 0.86 | 2.56 | 3.4095 (18) | 170 |
C9—H9A···S1ii | 0.96 | 2.85 | 3.799 (3) | 170 |
Symmetry codes: (i) −x, −y+1, −z; (ii) −x, −y+2, −z. |
Acknowledgements
The authors acknowledge the provision of funds for the purchase of the diffractometer and encouragement by Dr Muhammad Akram Chaudhary, Vice Chancellor, University of Sargodha, Pakistan. The authors also acknowledge the technical support provided by Syed Muhammad Hussain Rizvi of Bana International, Karachi, Pakistan.
References
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
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The title compound (Fig. 1) has been synthesized as a continuation of our work to find new enzyme inhibitors.
The crystal structures of N-(2-methylphenylcarbamothioyl)acetamide (Shahwar et al., 2012a) and N-(phenylcarbamothioyl)acetamide (Shahwar et al., 2012b) have been reported which are related to the title compound.
In the title compound, the 3-chlorophenyl group A (C1–C6/Cl1) and the N-carbamothioylacetamide moiety B (N1/C7/S1/N2/C8/O1/C9) are planar with r. m. s. deviation of 0.0055 Å and 0.0060 Å, respectively. The dihedral angle between A/B is 62.68 (5)°. There exist intramolecular H–bonding of N—H···O type (Table 1, Fig. 1) with S(6) ring motif (Bernstein et al., 1995). The molecules are dimerized due to N—H···S type of hydrogen bonds with R22(8) ring motifs (Table 1, Fig. 2). The dimers are interlinked due to C—H···S H–bondings (Table 1, Fig. 2) and complete R22(12) ring motifs.