metal-organic compounds
Bis(6-methoxy-1-methyl-2,3,4,9-tetrahydro-1H-β-carbolin-2-ium) tetrachloridozincate(II) dihydrate
aCentre for Drug Research, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
The 13H17N2O)2[ZnCl4]·2H2O, contains two tetrahydroharmine cations, one tetrachlorozincate(II) anion and two water molecules. In the cations, the two 1H-indole ring systems are essentially planar, with maximum deviations of 0.016 (2) and 0.018 (2) Å, and both tetrahydropyridinium rings show a half-chair conformation. The ZnII complex anion has a distorted tetrahedral geometry. In the crystal, intermolecular N—H⋯O, N—H⋯Cl, O—H⋯O, O—H⋯Cl and C—H⋯O hydrogen bonds link the components into a three-dimensional network. A π–π interaction with a centroid–centroid distance of 3.542 (14) Å is also observed.
of the title compound, (CRelated literature
For the biological activity of metal complexes with 6-methoxy-1-methyl-4,9-dihydro-3H-pyrido[3,4-b]indole, see: Al-Allaf et al. (1990); Herraiz et al. (2003). For structures of β-carboline and related compounds, see: Anlong et al. (2007); Larghi et al. (2005); Reimers et al. (1984); Wouters (1997); Ferretti et al. (2004). For a related tetrachloridozincate structure, see: Ma et al. (2009). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536812011130/is5085sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812011130/is5085Isup2.hkl
2M solution of hydrochloric acid in methanol was prepared by transferring 1.68 ml of 37% concentrated HCl acid into a 10 ml volumetric flask and was topped up to volume using methanol. The ZnCl2 (1 mmol, 136 mg) was weighed and 0.50 ml of 2M hydrochloric acid in methanol was added. Sonication was performed to aid dissolution. 6-methoxy-1-methyl-4,9-dihydro-3H-β-carboline (2.5 mmol, 540 mg) was weighed and 0.50 ml HPLC grade methanol was added. The solution was heated on water bath to facilitate dissolution. 0.50 ml of the ZnCl2 solution in 2M hydrochloric acid was then added to the 6-methoxy-1-methyl-4,9-dihydro-3H-β-carboline solution in methanol dropwise in a glass bottle. The side of the glass bottle was scratched with a small spatula and the bottle was kept in fridge at 4 °C for 5–7 days before yielding the colourless crystals of Bis(6-methoxy-1-methyl-4,9-dihydro-3H-β-carbolinium) tetrachloridozincatedihydrate which were filtered off, washed twice with acetone and air-dried. Crystals of the title compound, suitable to X-ray were selected directly from the samples as prepared.
O and N bound H atoms are located from a difference Fourier map and refined using a riding model. The remaining H atoms were positioned geometrically and refined using a riding model with C—H = 0.95–1.00 Å and Uiso(H) = 1.2 or 1.5Ueq(C-methyl). A rotating group model was applied to the methyl groups.
The metal complexes of the 6-methoxy-1-methyl-4,9-dihydro-3H-β-carboline and other carboline was previously reported to have biological activity (Al-Allaf et al., 1990). It is now well established that these classes of beta carboline may occur under mild conditions in foods from a Pictet Spengler condensation of indoleamines such as L-tryptophan and short aliphatic (Herraiz et al., 2003). Our present work intend to synthesize the titled compound and prepare it in salt form to investigate its safety and antiproliferative efficacy in cancer cell line.
The θ = 48.9 (4)°, φ = 24.3 (4)° for molecule A, and Q = 0.504 (3) Å, θ = 130.7 (3)°, φ = 206.6 (4)° for molecule B. The has extensive intermolecular N—H···C, N—H···O, O—H···Cl, O—H···O and C—H···O interactions (Table 1) that link the three components into a three-dimensional network (Fig. 2). A π–π interaction with a centroid-centroid distance of 3.542 (14) Å is observed (Cg1 = N1A—C11A, Cg2 = C1B—C6B, -x, y + 1, -z + 1/2).
of I contains two tetrahydroharmine cations, one zinc tetrachloride anion and two water molecules (Fig. 1). In these tetrahydroharmine cations, the maximum deviations for the two 1H-indole planes are 0.016 (2) and 0.018 (2) Å, respectively, for molecules A and B. The tetrahydropyridinium rings in both molecules show a half-chair conformation with the puckering parameters Q = 0.488 (3) Å,For the biological activity of metal complexes with 6- methoxy-1-methyl-4,9-dihydro-3H-pyrido[3,4-b]indole, see: Al-Allaf et al. (1990); Herraiz et al. (2003). For structures of β-carboline and related compounds, see: Anlong et al. (2007); Larghi et al. (2005); Reimers et al. (1984); Wouters (1997); Ferretti et al. (2004). For a related tetrachloridozincate structure, see: Ma et al. (2009). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, showing 50% probability displacement ellipsoids. Hydrogen atoms are shown as spheres of arbitrary radius. | |
Fig. 2. A crystal packing diagram of the title compound. Dashed lines indicate hydrogen bonds. H atoms not involved in the hydrogen bond interactions have been omitted for clarity. |
(C13H17N2O)2[ZnCl4]·2H2O | F(000) = 1408 |
Mr = 677.77 | Dx = 1.504 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 6348 reflections |
a = 7.3319 (1) Å | θ = 2.4–30.0° |
b = 18.5135 (3) Å | µ = 1.22 mm−1 |
c = 22.0578 (3) Å | T = 100 K |
β = 91.516 (1)° | Block, colourless |
V = 2993.06 (8) Å3 | 0.39 × 0.17 × 0.11 mm |
Z = 4 |
Bruker SMART APEXII CCD area-detector diffractometer | 8753 independent reflections |
Radiation source: fine-focus sealed tube | 6404 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.060 |
φ and ω scans | θmax = 30.1°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −10→10 |
Tmin = 0.648, Tmax = 0.876 | k = −25→26 |
33557 measured reflections | l = −29→31 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.098 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.034P)2 + 2.4492P] where P = (Fo2 + 2Fc2)/3 |
8753 reflections | (Δ/σ)max = 0.001 |
356 parameters | Δρmax = 0.70 e Å−3 |
0 restraints | Δρmin = −0.42 e Å−3 |
(C13H17N2O)2[ZnCl4]·2H2O | V = 2993.06 (8) Å3 |
Mr = 677.77 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.3319 (1) Å | µ = 1.22 mm−1 |
b = 18.5135 (3) Å | T = 100 K |
c = 22.0578 (3) Å | 0.39 × 0.17 × 0.11 mm |
β = 91.516 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 8753 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 6404 reflections with I > 2σ(I) |
Tmin = 0.648, Tmax = 0.876 | Rint = 0.060 |
33557 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.098 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.70 e Å−3 |
8753 reflections | Δρmin = −0.42 e Å−3 |
356 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.26573 (4) | 0.962442 (15) | 0.338408 (12) | 0.01473 (7) | |
Cl1 | −0.01952 (8) | 0.92451 (3) | 0.36215 (3) | 0.01755 (12) | |
Cl2 | 0.24649 (10) | 0.99951 (4) | 0.24105 (3) | 0.02531 (15) | |
Cl3 | 0.34993 (9) | 1.05252 (3) | 0.40340 (3) | 0.02075 (13) | |
Cl4 | 0.47209 (9) | 0.87115 (3) | 0.34904 (3) | 0.02156 (13) | |
O1A | 0.0570 (3) | 0.33708 (9) | 0.60925 (7) | 0.0208 (4) | |
N1A | 0.2953 (3) | 0.22751 (11) | 0.39336 (9) | 0.0168 (4) | |
H1NA | 0.3328 | 0.1841 | 0.3806 | 0.020* | |
N2A | 0.2749 (3) | 0.35932 (11) | 0.26700 (9) | 0.0206 (5) | |
H2NA | 0.3187 | 0.3633 | 0.2343 | 0.025* | |
H3NA | 0.1567 | 0.3510 | 0.2614 | 0.025* | |
C1A | 0.2379 (3) | 0.24608 (13) | 0.45051 (11) | 0.0155 (5) | |
C2A | 0.2228 (3) | 0.20436 (13) | 0.50269 (11) | 0.0176 (5) | |
H2AA | 0.2534 | 0.1545 | 0.5027 | 0.021* | |
C3A | 0.1624 (3) | 0.23764 (13) | 0.55412 (11) | 0.0183 (5) | |
H3AA | 0.1514 | 0.2104 | 0.5904 | 0.022* | |
C4A | 0.1165 (3) | 0.31170 (13) | 0.55381 (11) | 0.0161 (5) | |
C5A | 0.1324 (3) | 0.35399 (13) | 0.50265 (11) | 0.0159 (5) | |
H5AA | 0.1023 | 0.4039 | 0.5031 | 0.019* | |
C6A | 0.1949 (3) | 0.32041 (12) | 0.44983 (10) | 0.0144 (5) | |
C7A | 0.2315 (3) | 0.34639 (13) | 0.39013 (11) | 0.0158 (5) | |
C8A | 0.2124 (4) | 0.42097 (13) | 0.36420 (11) | 0.0185 (5) | |
H8AA | 0.2649 | 0.4567 | 0.3932 | 0.022* | |
H8AB | 0.0817 | 0.4325 | 0.3573 | 0.022* | |
C9A | 0.3114 (4) | 0.42501 (14) | 0.30467 (12) | 0.0238 (6) | |
H9AA | 0.2706 | 0.4685 | 0.2819 | 0.029* | |
H9AB | 0.4442 | 0.4295 | 0.3131 | 0.029* | |
C10A | 0.3524 (4) | 0.29054 (14) | 0.29338 (11) | 0.0207 (5) | |
H10A | 0.4886 | 0.2933 | 0.2932 | 0.025* | |
C11A | 0.2923 (3) | 0.28910 (13) | 0.35792 (11) | 0.0171 (5) | |
C12A | 0.0208 (4) | 0.41291 (14) | 0.61312 (12) | 0.0230 (5) | |
H12A | −0.0174 | 0.4248 | 0.6542 | 0.034* | |
H12B | −0.0766 | 0.4259 | 0.5838 | 0.034* | |
H12C | 0.1316 | 0.4400 | 0.6040 | 0.034* | |
C13A | 0.2905 (4) | 0.22674 (15) | 0.25513 (12) | 0.0269 (6) | |
H13A | 0.3437 | 0.1823 | 0.2720 | 0.040* | |
H13B | 0.3306 | 0.2333 | 0.2135 | 0.040* | |
H13C | 0.1571 | 0.2234 | 0.2552 | 0.040* | |
O1B | 0.4468 (3) | 0.92386 (9) | −0.07206 (8) | 0.0229 (4) | |
N1B | 0.2155 (3) | 0.76370 (11) | 0.12185 (9) | 0.0168 (4) | |
H1NB | 0.1594 | 0.7771 | 0.1571 | 0.020* | |
N2B | 0.2106 (3) | 0.56588 (11) | 0.09296 (9) | 0.0180 (4) | |
H2NB | 0.1558 | 0.5268 | 0.1035 | 0.022* | |
H3NB | 0.3344 | 0.5618 | 0.0984 | 0.022* | |
C1B | 0.2720 (3) | 0.81144 (13) | 0.07788 (11) | 0.0159 (5) | |
C2B | 0.2923 (3) | 0.88670 (13) | 0.07965 (11) | 0.0191 (5) | |
H2BA | 0.2675 | 0.9133 | 0.1153 | 0.023* | |
C3B | 0.3491 (3) | 0.92074 (13) | 0.02824 (12) | 0.0205 (5) | |
H3BA | 0.3615 | 0.9718 | 0.0282 | 0.025* | |
C4B | 0.3893 (3) | 0.88144 (13) | −0.02451 (11) | 0.0184 (5) | |
C5B | 0.3702 (3) | 0.80745 (13) | −0.02703 (11) | 0.0164 (5) | |
H5BA | 0.3975 | 0.7813 | −0.0627 | 0.020* | |
C6B | 0.3089 (3) | 0.77191 (12) | 0.02494 (11) | 0.0147 (5) | |
C7B | 0.2684 (3) | 0.69762 (12) | 0.03832 (10) | 0.0142 (4) | |
C8B | 0.2740 (4) | 0.63242 (12) | −0.00178 (11) | 0.0169 (5) | |
H8BA | 0.4020 | 0.6169 | −0.0066 | 0.020* | |
H8BB | 0.2218 | 0.6443 | −0.0424 | 0.020* | |
C9B | 0.1652 (4) | 0.57181 (13) | 0.02624 (11) | 0.0183 (5) | |
H9BA | 0.0331 | 0.5814 | 0.0202 | 0.022* | |
H9BB | 0.1937 | 0.5256 | 0.0060 | 0.022* | |
C10B | 0.1468 (4) | 0.62980 (13) | 0.12931 (11) | 0.0185 (5) | |
H10B | 0.0104 | 0.6301 | 0.1288 | 0.022* | |
C11B | 0.2120 (3) | 0.69530 (12) | 0.09674 (11) | 0.0151 (5) | |
C12B | 0.4831 (4) | 0.88787 (15) | −0.12753 (11) | 0.0237 (6) | |
H12D | 0.5254 | 0.9230 | −0.1572 | 0.036* | |
H12E | 0.3713 | 0.8647 | −0.1431 | 0.036* | |
H12F | 0.5775 | 0.8512 | −0.1204 | 0.036* | |
C13B | 0.2165 (4) | 0.62126 (15) | 0.19426 (11) | 0.0264 (6) | |
H13D | 0.1824 | 0.6638 | 0.2179 | 0.040* | |
H13E | 0.3497 | 0.6165 | 0.1949 | 0.040* | |
H13F | 0.1626 | 0.5780 | 0.2120 | 0.040* | |
O1WA | 0.8196 (3) | 0.25435 (10) | 0.67829 (9) | 0.0288 (4) | |
H1WA | 0.7555 | 0.2236 | 0.6529 | 0.043* | |
H2WA | 0.9016 | 0.2780 | 0.6552 | 0.043* | |
O1WB | 0.1004 (3) | 0.83525 (10) | 0.22985 (8) | 0.0238 (4) | |
H1WB | 0.1204 | 0.8048 | 0.2610 | 0.036* | |
H2WB | 0.1576 | 0.8790 | 0.2333 | 0.036* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.01490 (14) | 0.01365 (13) | 0.01579 (13) | −0.00034 (11) | 0.00312 (10) | −0.00027 (11) |
Cl1 | 0.0148 (3) | 0.0147 (3) | 0.0234 (3) | −0.0003 (2) | 0.0051 (2) | −0.0018 (2) |
Cl2 | 0.0292 (4) | 0.0285 (3) | 0.0183 (3) | 0.0008 (3) | 0.0031 (3) | 0.0068 (2) |
Cl3 | 0.0213 (3) | 0.0158 (3) | 0.0253 (3) | −0.0025 (2) | 0.0016 (2) | −0.0045 (2) |
Cl4 | 0.0188 (3) | 0.0236 (3) | 0.0227 (3) | 0.0068 (2) | 0.0071 (2) | 0.0033 (2) |
O1A | 0.0264 (10) | 0.0188 (9) | 0.0174 (8) | −0.0001 (7) | 0.0028 (7) | −0.0022 (7) |
N1A | 0.0194 (11) | 0.0140 (9) | 0.0170 (10) | 0.0017 (8) | 0.0025 (8) | −0.0022 (8) |
N2A | 0.0198 (11) | 0.0235 (11) | 0.0187 (10) | −0.0003 (9) | 0.0060 (9) | 0.0052 (9) |
C1A | 0.0131 (11) | 0.0148 (11) | 0.0188 (11) | −0.0012 (9) | 0.0022 (9) | −0.0009 (9) |
C2A | 0.0180 (12) | 0.0133 (11) | 0.0216 (12) | −0.0014 (9) | 0.0001 (10) | 0.0007 (9) |
C3A | 0.0169 (12) | 0.0197 (12) | 0.0181 (12) | −0.0028 (10) | −0.0003 (10) | 0.0027 (9) |
C4A | 0.0126 (11) | 0.0198 (12) | 0.0159 (11) | −0.0026 (9) | −0.0003 (9) | −0.0039 (9) |
C5A | 0.0131 (11) | 0.0149 (11) | 0.0197 (11) | 0.0003 (9) | −0.0002 (9) | −0.0014 (9) |
C6A | 0.0131 (11) | 0.0138 (11) | 0.0162 (11) | −0.0006 (9) | −0.0002 (9) | 0.0003 (9) |
C7A | 0.0133 (11) | 0.0157 (11) | 0.0184 (11) | 0.0000 (9) | 0.0014 (9) | 0.0007 (9) |
C8A | 0.0209 (13) | 0.0146 (11) | 0.0201 (12) | 0.0002 (10) | 0.0027 (10) | 0.0033 (9) |
C9A | 0.0276 (15) | 0.0175 (12) | 0.0265 (13) | −0.0042 (11) | 0.0062 (11) | 0.0026 (10) |
C10A | 0.0208 (13) | 0.0217 (12) | 0.0199 (12) | 0.0037 (10) | 0.0057 (10) | 0.0012 (10) |
C11A | 0.0167 (12) | 0.0175 (11) | 0.0169 (11) | −0.0006 (9) | 0.0003 (9) | 0.0019 (9) |
C12A | 0.0260 (14) | 0.0220 (13) | 0.0210 (12) | 0.0003 (11) | 0.0016 (11) | −0.0061 (10) |
C13A | 0.0337 (16) | 0.0270 (14) | 0.0200 (13) | 0.0043 (12) | 0.0016 (11) | −0.0026 (11) |
O1B | 0.0268 (10) | 0.0170 (9) | 0.0251 (9) | −0.0034 (8) | 0.0033 (8) | 0.0067 (7) |
N1B | 0.0173 (11) | 0.0159 (10) | 0.0174 (10) | −0.0013 (8) | 0.0049 (8) | −0.0034 (8) |
N2B | 0.0201 (11) | 0.0141 (9) | 0.0202 (10) | −0.0042 (8) | 0.0044 (8) | 0.0002 (8) |
C1B | 0.0120 (11) | 0.0157 (11) | 0.0199 (12) | −0.0002 (9) | −0.0003 (9) | −0.0020 (9) |
C2B | 0.0174 (12) | 0.0161 (11) | 0.0239 (13) | 0.0016 (9) | −0.0003 (10) | −0.0051 (10) |
C3B | 0.0171 (13) | 0.0143 (11) | 0.0299 (13) | 0.0005 (9) | −0.0020 (10) | 0.0014 (10) |
C4B | 0.0135 (11) | 0.0170 (11) | 0.0246 (12) | −0.0021 (9) | −0.0004 (10) | 0.0056 (10) |
C5B | 0.0127 (11) | 0.0179 (11) | 0.0186 (11) | −0.0002 (9) | 0.0011 (9) | 0.0005 (9) |
C6B | 0.0108 (11) | 0.0143 (11) | 0.0190 (11) | 0.0012 (9) | −0.0001 (9) | 0.0005 (9) |
C7B | 0.0133 (11) | 0.0142 (11) | 0.0150 (11) | −0.0012 (9) | 0.0006 (9) | −0.0015 (9) |
C8B | 0.0200 (12) | 0.0158 (11) | 0.0150 (11) | −0.0025 (9) | 0.0030 (9) | −0.0004 (9) |
C9B | 0.0225 (13) | 0.0141 (11) | 0.0183 (12) | −0.0032 (10) | 0.0016 (10) | −0.0026 (9) |
C10B | 0.0199 (13) | 0.0173 (11) | 0.0185 (12) | −0.0032 (10) | 0.0051 (10) | −0.0022 (9) |
C11B | 0.0130 (11) | 0.0143 (11) | 0.0181 (11) | −0.0009 (9) | 0.0024 (9) | −0.0015 (9) |
C12B | 0.0234 (14) | 0.0252 (13) | 0.0225 (13) | −0.0031 (11) | 0.0013 (11) | 0.0082 (11) |
C13B | 0.0355 (16) | 0.0261 (14) | 0.0179 (12) | −0.0035 (12) | 0.0032 (11) | 0.0007 (10) |
O1WA | 0.0327 (12) | 0.0249 (10) | 0.0289 (10) | −0.0012 (9) | 0.0048 (9) | 0.0014 (8) |
O1WB | 0.0274 (10) | 0.0238 (9) | 0.0202 (9) | −0.0009 (8) | 0.0034 (8) | −0.0021 (7) |
Zn1—Cl2 | 2.2554 (7) | O1B—C4B | 1.385 (3) |
Zn1—Cl3 | 2.2739 (7) | O1B—C12B | 1.425 (3) |
Zn1—Cl4 | 2.2763 (7) | N1B—C11B | 1.382 (3) |
Zn1—Cl1 | 2.2802 (6) | N1B—C1B | 1.384 (3) |
O1A—C4A | 1.391 (3) | N1B—H1NB | 0.9238 |
O1A—C12A | 1.432 (3) | N2B—C9B | 1.504 (3) |
N1A—C11A | 1.382 (3) | N2B—C10B | 1.511 (3) |
N1A—C1A | 1.383 (3) | N2B—H2NB | 0.8624 |
N1A—H1NA | 0.8963 | N2B—H3NB | 0.9155 |
N2A—C9A | 1.493 (3) | C1B—C2B | 1.402 (3) |
N2A—C10A | 1.505 (3) | C1B—C6B | 1.410 (3) |
N2A—H2NA | 0.8004 | C2B—C3B | 1.372 (3) |
N2A—H3NA | 0.8857 | C2B—H2BA | 0.9500 |
C1A—C2A | 1.393 (3) | C3B—C4B | 1.410 (4) |
C1A—C6A | 1.412 (3) | C3B—H3BA | 0.9500 |
C2A—C3A | 1.375 (3) | C4B—C5B | 1.378 (3) |
C2A—H2AA | 0.9500 | C5B—C6B | 1.406 (3) |
C3A—C4A | 1.412 (3) | C5B—H5BA | 0.9500 |
C3A—H3AA | 0.9500 | C6B—C7B | 1.439 (3) |
C4A—C5A | 1.381 (3) | C7B—C11B | 1.364 (3) |
C5A—C6A | 1.408 (3) | C7B—C8B | 1.498 (3) |
C5A—H5AA | 0.9500 | C8B—C9B | 1.518 (3) |
C6A—C7A | 1.434 (3) | C8B—H8BA | 0.9900 |
C7A—C11A | 1.358 (3) | C8B—H8BB | 0.9900 |
C7A—C8A | 1.500 (3) | C9B—H9BA | 0.9900 |
C8A—C9A | 1.519 (3) | C9B—H9BB | 0.9900 |
C8A—H8AA | 0.9900 | C10B—C11B | 1.495 (3) |
C8A—H8AB | 0.9900 | C10B—C13B | 1.517 (4) |
C9A—H9AA | 0.9900 | C10B—H10B | 1.0000 |
C9A—H9AB | 0.9900 | C12B—H12D | 0.9800 |
C10A—C11A | 1.501 (3) | C12B—H12E | 0.9800 |
C10A—C13A | 1.514 (4) | C12B—H12F | 0.9800 |
C10A—H10A | 1.0000 | C13B—H13D | 0.9800 |
C12A—H12A | 0.9800 | C13B—H13E | 0.9800 |
C12A—H12B | 0.9800 | C13B—H13F | 0.9800 |
C12A—H12C | 0.9800 | O1WA—H1WA | 0.9187 |
C13A—H13A | 0.9800 | O1WA—H2WA | 0.9097 |
C13A—H13B | 0.9800 | O1WB—H1WB | 0.8973 |
C13A—H13C | 0.9800 | O1WB—H2WB | 0.9144 |
Cl2—Zn1—Cl3 | 112.72 (3) | H13A—C13A—H13C | 109.5 |
Cl2—Zn1—Cl4 | 110.40 (3) | H13B—C13A—H13C | 109.5 |
Cl3—Zn1—Cl4 | 108.12 (3) | C4B—O1B—C12B | 116.91 (19) |
Cl2—Zn1—Cl1 | 106.12 (3) | C11B—N1B—C1B | 107.89 (19) |
Cl3—Zn1—Cl1 | 108.45 (2) | C11B—N1B—H1NB | 125.4 |
Cl4—Zn1—Cl1 | 111.03 (2) | C1B—N1B—H1NB | 124.6 |
C4A—O1A—C12A | 116.52 (19) | C9B—N2B—C10B | 113.50 (19) |
C11A—N1A—C1A | 108.04 (19) | C9B—N2B—H2NB | 103.4 |
C11A—N1A—H1NA | 124.2 | C10B—N2B—H2NB | 111.2 |
C1A—N1A—H1NA | 127.7 | C9B—N2B—H3NB | 109.1 |
C9A—N2A—C10A | 114.4 (2) | C10B—N2B—H3NB | 108.4 |
C9A—N2A—H2NA | 110.9 | H2NB—N2B—H3NB | 111.2 |
C10A—N2A—H2NA | 105.6 | N1B—C1B—C2B | 130.5 (2) |
C9A—N2A—H3NA | 112.3 | N1B—C1B—C6B | 108.4 (2) |
C10A—N2A—H3NA | 105.3 | C2B—C1B—C6B | 121.1 (2) |
H2NA—N2A—H3NA | 107.8 | C3B—C2B—C1B | 117.9 (2) |
N1A—C1A—C2A | 130.4 (2) | C3B—C2B—H2BA | 121.0 |
N1A—C1A—C6A | 107.8 (2) | C1B—C2B—H2BA | 121.0 |
C2A—C1A—C6A | 121.8 (2) | C2B—C3B—C4B | 121.3 (2) |
C3A—C2A—C1A | 117.9 (2) | C2B—C3B—H3BA | 119.3 |
C3A—C2A—H2AA | 121.1 | C4B—C3B—H3BA | 119.3 |
C1A—C2A—H2AA | 121.1 | C5B—C4B—O1B | 124.5 (2) |
C2A—C3A—C4A | 120.9 (2) | C5B—C4B—C3B | 121.5 (2) |
C2A—C3A—H3AA | 119.6 | O1B—C4B—C3B | 114.0 (2) |
C4A—C3A—H3AA | 119.6 | C4B—C5B—C6B | 117.8 (2) |
C5A—C4A—O1A | 124.2 (2) | C4B—C5B—H5BA | 121.1 |
C5A—C4A—C3A | 122.0 (2) | C6B—C5B—H5BA | 121.1 |
O1A—C4A—C3A | 113.8 (2) | C5B—C6B—C1B | 120.3 (2) |
C4A—C5A—C6A | 117.5 (2) | C5B—C6B—C7B | 133.4 (2) |
C4A—C5A—H5AA | 121.2 | C1B—C6B—C7B | 106.3 (2) |
C6A—C5A—H5AA | 121.2 | C11B—C7B—C6B | 107.0 (2) |
C5A—C6A—C1A | 119.9 (2) | C11B—C7B—C8B | 123.1 (2) |
C5A—C6A—C7A | 133.2 (2) | C6B—C7B—C8B | 129.8 (2) |
C1A—C6A—C7A | 106.8 (2) | C7B—C8B—C9B | 109.41 (19) |
C11A—C7A—C6A | 106.9 (2) | C7B—C8B—H8BA | 109.8 |
C11A—C7A—C8A | 123.2 (2) | C9B—C8B—H8BA | 109.8 |
C6A—C7A—C8A | 129.9 (2) | C7B—C8B—H8BB | 109.8 |
C7A—C8A—C9A | 109.5 (2) | C9B—C8B—H8BB | 109.8 |
C7A—C8A—H8AA | 109.8 | H8BA—C8B—H8BB | 108.2 |
C9A—C8A—H8AA | 109.8 | N2B—C9B—C8B | 110.3 (2) |
C7A—C8A—H8AB | 109.8 | N2B—C9B—H9BA | 109.6 |
C9A—C8A—H8AB | 109.8 | C8B—C9B—H9BA | 109.6 |
H8AA—C8A—H8AB | 108.2 | N2B—C9B—H9BB | 109.6 |
N2A—C9A—C8A | 111.0 (2) | C8B—C9B—H9BB | 109.6 |
N2A—C9A—H9AA | 109.4 | H9BA—C9B—H9BB | 108.1 |
C8A—C9A—H9AA | 109.4 | C11B—C10B—N2B | 105.84 (18) |
N2A—C9A—H9AB | 109.4 | C11B—C10B—C13B | 115.8 (2) |
C8A—C9A—H9AB | 109.4 | N2B—C10B—C13B | 108.6 (2) |
H9AA—C9A—H9AB | 108.0 | C11B—C10B—H10B | 108.8 |
C11A—C10A—N2A | 105.33 (19) | N2B—C10B—H10B | 108.8 |
C11A—C10A—C13A | 115.0 (2) | C13B—C10B—H10B | 108.8 |
N2A—C10A—C13A | 109.9 (2) | C7B—C11B—N1B | 110.3 (2) |
C11A—C10A—H10A | 108.8 | C7B—C11B—C10B | 126.0 (2) |
N2A—C10A—H10A | 108.8 | N1B—C11B—C10B | 123.6 (2) |
C13A—C10A—H10A | 108.8 | O1B—C12B—H12D | 109.5 |
C7A—C11A—N1A | 110.4 (2) | O1B—C12B—H12E | 109.5 |
C7A—C11A—C10A | 126.2 (2) | H12D—C12B—H12E | 109.5 |
N1A—C11A—C10A | 123.4 (2) | O1B—C12B—H12F | 109.5 |
O1A—C12A—H12A | 109.5 | H12D—C12B—H12F | 109.5 |
O1A—C12A—H12B | 109.5 | H12E—C12B—H12F | 109.5 |
H12A—C12A—H12B | 109.5 | C10B—C13B—H13D | 109.5 |
O1A—C12A—H12C | 109.5 | C10B—C13B—H13E | 109.5 |
H12A—C12A—H12C | 109.5 | H13D—C13B—H13E | 109.5 |
H12B—C12A—H12C | 109.5 | C10B—C13B—H13F | 109.5 |
C10A—C13A—H13A | 109.5 | H13D—C13B—H13F | 109.5 |
C10A—C13A—H13B | 109.5 | H13E—C13B—H13F | 109.5 |
H13A—C13A—H13B | 109.5 | H1WA—O1WA—H2WA | 107.0 |
C10A—C13A—H13C | 109.5 | H1WB—O1WB—H2WB | 115.3 |
C11A—N1A—C1A—C2A | −177.6 (3) | C11B—N1B—C1B—C2B | 177.7 (3) |
C11A—N1A—C1A—C6A | 1.2 (3) | C11B—N1B—C1B—C6B | −1.5 (3) |
N1A—C1A—C2A—C3A | 179.4 (2) | N1B—C1B—C2B—C3B | −179.1 (3) |
C6A—C1A—C2A—C3A | 0.7 (4) | C6B—C1B—C2B—C3B | 0.0 (4) |
C1A—C2A—C3A—C4A | 0.3 (4) | C1B—C2B—C3B—C4B | −1.2 (4) |
C12A—O1A—C4A—C5A | −3.6 (3) | C12B—O1B—C4B—C5B | 1.9 (4) |
C12A—O1A—C4A—C3A | 175.7 (2) | C12B—O1B—C4B—C3B | −177.7 (2) |
C2A—C3A—C4A—C5A | −1.0 (4) | C2B—C3B—C4B—C5B | 1.2 (4) |
C2A—C3A—C4A—O1A | 179.7 (2) | C2B—C3B—C4B—O1B | −179.3 (2) |
O1A—C4A—C5A—C6A | 179.9 (2) | O1B—C4B—C5B—C6B | −179.5 (2) |
C3A—C4A—C5A—C6A | 0.7 (4) | C3B—C4B—C5B—C6B | 0.0 (4) |
C4A—C5A—C6A—C1A | 0.2 (3) | C4B—C5B—C6B—C1B | −1.1 (4) |
C4A—C5A—C6A—C7A | −178.5 (3) | C4B—C5B—C6B—C7B | 177.8 (3) |
N1A—C1A—C6A—C5A | −179.9 (2) | N1B—C1B—C6B—C5B | −179.6 (2) |
C2A—C1A—C6A—C5A | −0.9 (4) | C2B—C1B—C6B—C5B | 1.1 (4) |
N1A—C1A—C6A—C7A | −0.9 (3) | N1B—C1B—C6B—C7B | 1.2 (3) |
C2A—C1A—C6A—C7A | 178.1 (2) | C2B—C1B—C6B—C7B | −178.1 (2) |
C5A—C6A—C7A—C11A | 179.1 (3) | C5B—C6B—C7B—C11B | −179.5 (3) |
C1A—C6A—C7A—C11A | 0.2 (3) | C1B—C6B—C7B—C11B | −0.4 (3) |
C5A—C6A—C7A—C8A | −0.5 (5) | C5B—C6B—C7B—C8B | −2.2 (5) |
C1A—C6A—C7A—C8A | −179.3 (2) | C1B—C6B—C7B—C8B | 176.8 (2) |
C11A—C7A—C8A—C9A | −13.4 (3) | C11B—C7B—C8B—C9B | 14.5 (3) |
C6A—C7A—C8A—C9A | 166.1 (3) | C6B—C7B—C8B—C9B | −162.4 (2) |
C10A—N2A—C9A—C8A | −66.4 (3) | C10B—N2B—C9B—C8B | 67.6 (3) |
C7A—C8A—C9A—N2A | 43.0 (3) | C7B—C8B—C9B—N2B | −45.0 (3) |
C9A—N2A—C10A—C11A | 49.5 (3) | C9B—N2B—C10B—C11B | −49.5 (3) |
C9A—N2A—C10A—C13A | 174.0 (2) | C9B—N2B—C10B—C13B | −174.4 (2) |
C6A—C7A—C11A—N1A | 0.5 (3) | C6B—C7B—C11B—N1B | −0.5 (3) |
C8A—C7A—C11A—N1A | −179.9 (2) | C8B—C7B—C11B—N1B | −178.0 (2) |
C6A—C7A—C11A—C10A | −178.3 (2) | C6B—C7B—C11B—C10B | 176.8 (2) |
C8A—C7A—C11A—C10A | 1.2 (4) | C8B—C7B—C11B—C10B | −0.7 (4) |
C1A—N1A—C11A—C7A | −1.1 (3) | C1B—N1B—C11B—C7B | 1.3 (3) |
C1A—N1A—C11A—C10A | 177.8 (2) | C1B—N1B—C11B—C10B | −176.1 (2) |
N2A—C10A—C11A—C7A | −18.0 (3) | N2B—C10B—C11B—C7B | 17.2 (3) |
C13A—C10A—C11A—C7A | −139.1 (3) | C13B—C10B—C11B—C7B | 137.5 (3) |
N2A—C10A—C11A—N1A | 163.3 (2) | N2B—C10B—C11B—N1B | −165.8 (2) |
C13A—C10A—C11A—N1A | 42.1 (4) | C13B—C10B—C11B—N1B | −45.5 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1A—H1NA···Cl3i | 0.90 | 2.49 | 3.271 (2) | 146 |
N2A—H2NA···Cl4ii | 0.80 | 2.43 | 3.208 (2) | 164 |
N2A—H3NA···O1WBiii | 0.89 | 1.92 | 2.790 (3) | 166 |
N1B—H1NB···O1WB | 0.92 | 1.99 | 2.872 (3) | 159 |
N2B—H2NB···Cl1iii | 0.86 | 2.28 | 3.141 (2) | 176 |
N2B—H3NB···Cl3ii | 0.92 | 2.32 | 3.231 (2) | 171 |
O1WA—H1WA···Cl4iv | 0.92 | 2.42 | 3.204 (2) | 143 |
O1WA—H2WA···O1Av | 0.91 | 1.89 | 2.799 (3) | 173 |
O1WB—H1WB···O1WAiv | 0.90 | 1.78 | 2.672 (3) | 175 |
O1WB—H2WB···Cl2 | 0.91 | 2.33 | 3.231 (2) | 169 |
C12B—H12E···O1WAvi | 0.98 | 2.58 | 3.487 (3) | 153 |
C3B—H3BA···O1Bvii | 0.95 | 2.56 | 3.373 (3) | 143 |
Symmetry codes: (i) x, y−1, z; (ii) −x+1, y−1/2, −z+1/2; (iii) −x, y−1/2, −z+1/2; (iv) −x+1, −y+1, −z+1; (v) x+1, y, z; (vi) −x+1, y+1/2, −z+1/2; (vii) −x+1, −y+2, −z. |
Experimental details
Crystal data | |
Chemical formula | (C13H17N2O)2[ZnCl4]·2H2O |
Mr | 677.77 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 7.3319 (1), 18.5135 (3), 22.0578 (3) |
β (°) | 91.516 (1) |
V (Å3) | 2993.06 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.22 |
Crystal size (mm) | 0.39 × 0.17 × 0.11 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.648, 0.876 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 33557, 8753, 6404 |
Rint | 0.060 |
(sin θ/λ)max (Å−1) | 0.705 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.098, 1.03 |
No. of reflections | 8753 |
No. of parameters | 356 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.70, −0.42 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1A—H1NA···Cl3i | 0.90 | 2.49 | 3.271 (2) | 146 |
N2A—H2NA···Cl4ii | 0.80 | 2.43 | 3.208 (2) | 164 |
N2A—H3NA···O1WBiii | 0.89 | 1.92 | 2.790 (3) | 166 |
N1B—H1NB···O1WB | 0.92 | 1.99 | 2.872 (3) | 159 |
N2B—H2NB···Cl1iii | 0.86 | 2.28 | 3.141 (2) | 176 |
N2B—H3NB···Cl3ii | 0.92 | 2.32 | 3.231 (2) | 171 |
O1WA—H1WA···Cl4iv | 0.92 | 2.42 | 3.204 (2) | 143 |
O1WA—H2WA···O1Av | 0.91 | 1.89 | 2.799 (3) | 173 |
O1WB—H1WB···O1WAiv | 0.90 | 1.78 | 2.672 (3) | 175 |
O1WB—H2WB···Cl2 | 0.91 | 2.33 | 3.231 (2) | 169 |
C12B—H12E···O1WAvi | 0.98 | 2.58 | 3.487 (3) | 153 |
C3B—H3BA···O1Bvii | 0.95 | 2.56 | 3.373 (3) | 143 |
Symmetry codes: (i) x, y−1, z; (ii) −x+1, y−1/2, −z+1/2; (iii) −x, y−1/2, −z+1/2; (iv) −x+1, −y+1, −z+1; (v) x+1, y, z; (vi) −x+1, y+1/2, −z+1/2; (vii) −x+1, −y+2, −z. |
Acknowledgements
This work was supported by USM Research University Grant No. 1001/CDADAH/815020 and the R&D Initiative Fund, Ministry of Science, Technology and Innovation, Malaysia (MOSTI). HKF also thanks Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The metal complexes of the 6-methoxy-1-methyl-4,9-dihydro-3H-β-carboline and other carboline alkaloids was previously reported to have biological activity (Al-Allaf et al., 1990). It is now well established that these classes of beta carboline alkaloids may occur under mild conditions in foods from a Pictet Spengler condensation of indoleamines such as L-tryptophan and short aliphatic aldehydes (Herraiz et al., 2003). Our present work intend to synthesize the titled compound and prepare it in salt form to investigate its safety and antiproliferative efficacy in cancer cell line.
The asymmetric unit of I contains two tetrahydroharmine cations, one zinc tetrachloride anion and two water molecules (Fig. 1). In these tetrahydroharmine cations, the maximum deviations for the two 1H-indole planes are 0.016 (2) and 0.018 (2) Å, respectively, for molecules A and B. The tetrahydropyridinium rings in both molecules show a half-chair conformation with the puckering parameters Q = 0.488 (3) Å, θ = 48.9 (4)°, φ = 24.3 (4)° for molecule A, and Q = 0.504 (3) Å, θ = 130.7 (3)°, φ = 206.6 (4)° for molecule B. The crystal structure has extensive intermolecular N—H···C, N—H···O, O—H···Cl, O—H···O and C—H···O interactions (Table 1) that link the three components into a three-dimensional network (Fig. 2). A π–π interaction with a centroid-centroid distance of 3.542 (14) Å is observed (Cg1 = N1A—C11A, Cg2 = C1B—C6B, -x, y + 1, -z + 1/2).