organic compounds
N′-[(1E,2E)-3,7-Dimethylocta-2,6-dien-1-ylidene]pyridine-4-carbohydrazide
aDepartment of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, PO Box 2457, Riyadh 11451, Saudi Arabia, and bX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title compound, C16H21N3O, the molecule adopts an E conformation about the central C=N double bond. The 2-methylpent-2-ene group is disordered over two sets of sites, with a refined occupancy ratio of 0.785 (8):0.215 (8). The dihedral angle between the essentially planar [the r.m.s. value for the major component is 0.021 (7) and its maximum deviation is 0.025 (4) Å; the r.m.s. value for the minor component is 0.03 (4) and its maximum deviation is 0.05 (3) Å] major and minor components of the 2-methylbut-2-ene group is 35.9 (13)°. In the crystal, C—H⋯O and N—H⋯O hydrogen bonds link the molecules, with the same O atom acting as the acceptor. This results in C11(4) and C11(5) [001] chains.
Related literature
For details and the biological activity of isoniazide, see: Janin (2007); Maccari et al. (2005); Slayden & Barry (2000); Hearn et al. (2009); Tripathi et al. (2011). For related structures, see: Naveenkumar et al. (2010); Jiang et al. (2009); Khan et al. (2009). For hydrogen-bond motifs, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536812009075/lh5421sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812009075/lh5421Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812009075/lh5421Isup3.cml
The title compound was prepared by the reaction of citral, 3,7-dimethylocta- 2,6-dienal (0.15 g, 1 mmol) with isoniazid (0.14 g, 1 mmol) in ETOH/H2O (3:1, v/v, 10 mL). After stirring for 3 h at room temperature, the resulting mixture was concentrated under reduced pressure. The residue washed with cold ethyl alcohol and then with ethyl ether to afford the title compound. Colorless blocks of the latter compound suitable for X-ray
were recrystallized from ETOH by the slow evaporation of the solvent at room temperature.Atom H1N3 was located from a difference Fourier maps and refined freely [N–H = 0.873 (18) Å]. The remaining H atoms were positioned geometrically [C–H = 0.93–0.97 Å] and were refined using a riding model, with Uiso(H) = 1.2 or 1.5 Ueq(C). A rotating group model was applied to the methyl groups. The 2-methylpent-2-ene group is disordered over two sets of sites, with a refined occupancy ratio of 0.785 (8):0.215 (8).
In the search of new compounds, isoniazid derivatives have been found to possess potential tuberculostatic activity (Janin, 2007; Maccari et al., 2005; Slayden & Barry, 2000; Hearn et al., 2009; Tripathi et al., 2011). The crystal structures of (E)-N'- (2-Benzyloxybenzylidene)isonicotinohydrazide methanol solvate monohydrate (Naveenkumar et al., 2010), N'-(1-Phenylethylidene)isonicotino hydrazide (Jiang et al., 2009) and N'-(4-Bromophenylsulfonyl) isonicotinohydrazide (Khan et al., 2009) have been reported in the literature. Here, we present the
of the title compound, (I).The ═N2 double bond. The 2-methylpent-2-ene group is disordered over two sets of sites, with a refined occupancy ratio of 0.785 (8):0.215 (8). The dihedral angles between the major and minor components of the 2-methylbut-2-ene (C11–C15:C11A–C15A) group is 35.9 (13)°.
of the title compound is shown in Fig. 1. The molecule adopts an E configuration about the central C7In the crystal, Fig. 2, the adjacent molecules are connected via bifurcated N—H···O and C—H···O hydrogen bonds (Table 1), generating R12(7) ring motifs (Bernstein et al., 1995), resulting in supramolecular [001] chains.
For details and the biological activity of isoniazide, see: Janin (2007); Maccari et al. (2005); Slayden & Barry (2000); Hearn et al. (2009); Tripathi et al. (2011). For related structures, see: Naveenkumar et al. (2010); Jiang et al. (2009); Khan et al. (2009). For hydrogen-bond motifs, see: Bernstein et al. (1995).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C16H21N3O | F(000) = 584 |
Mr = 271.36 | Dx = 1.109 Mg m−3 |
Monoclinic, P21/c | Cu Kα radiation, λ = 1.54178 Å |
Hall symbol: -P 2ybc | Cell parameters from 1053 reflections |
a = 17.5415 (8) Å | θ = 11.3–69.5° |
b = 12.0708 (6) Å | µ = 0.56 mm−1 |
c = 7.8430 (4) Å | T = 296 K |
β = 101.854 (3)° | Block, colourless |
V = 1625.26 (14) Å3 | 0.90 × 0.27 × 0.17 mm |
Z = 4 |
Bruker SMART APEXII CCD area-detector diffractometer | 2978 independent reflections |
Radiation source: fine-focus sealed tube | 2376 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
φ and ω scans | θmax = 69.7°, θmin = 5.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −16→21 |
Tmin = 0.633, Tmax = 0.912 | k = −14→14 |
16548 measured reflections | l = −9→7 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.049 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.154 | w = 1/[σ2(Fo2) + (0.0826P)2 + 0.2272P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max < 0.001 |
2978 reflections | Δρmax = 0.13 e Å−3 |
239 parameters | Δρmin = −0.14 e Å−3 |
12 restraints | Extinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0032 (6) |
C16H21N3O | V = 1625.26 (14) Å3 |
Mr = 271.36 | Z = 4 |
Monoclinic, P21/c | Cu Kα radiation |
a = 17.5415 (8) Å | µ = 0.56 mm−1 |
b = 12.0708 (6) Å | T = 296 K |
c = 7.8430 (4) Å | 0.90 × 0.27 × 0.17 mm |
β = 101.854 (3)° |
Bruker SMART APEXII CCD area-detector diffractometer | 2978 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 2376 reflections with I > 2σ(I) |
Tmin = 0.633, Tmax = 0.912 | Rint = 0.027 |
16548 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 12 restraints |
wR(F2) = 0.154 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.13 e Å−3 |
2978 reflections | Δρmin = −0.14 e Å−3 |
239 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.30512 (6) | 0.61845 (10) | 0.31148 (14) | 0.0640 (3) | |
N1 | 0.06078 (9) | 0.62725 (17) | 0.5444 (3) | 0.0897 (5) | |
N2 | 0.40983 (7) | 0.76093 (12) | 0.49025 (19) | 0.0656 (4) | |
N3 | 0.33659 (7) | 0.74425 (12) | 0.52777 (18) | 0.0602 (4) | |
C1 | 0.09771 (12) | 0.54801 (19) | 0.4767 (3) | 0.0905 (7) | |
H1A | 0.0724 | 0.4805 | 0.4511 | 0.109* | |
C2 | 0.17110 (10) | 0.55920 (16) | 0.4418 (3) | 0.0746 (5) | |
H2A | 0.1942 | 0.5007 | 0.3941 | 0.090* | |
C3 | 0.20985 (8) | 0.65855 (13) | 0.47852 (19) | 0.0558 (4) | |
C4 | 0.17217 (9) | 0.74139 (15) | 0.5489 (2) | 0.0686 (5) | |
H4A | 0.1959 | 0.8099 | 0.5756 | 0.082* | |
C5 | 0.09864 (10) | 0.72159 (19) | 0.5792 (3) | 0.0822 (6) | |
H5A | 0.0742 | 0.7785 | 0.6274 | 0.099* | |
C6 | 0.28809 (8) | 0.67137 (13) | 0.43211 (19) | 0.0534 (4) | |
C7 | 0.45447 (9) | 0.82229 (15) | 0.6011 (2) | 0.0645 (4) | |
H7A | 0.4366 | 0.8509 | 0.6957 | 0.077* | |
C8 | 0.53221 (10) | 0.84735 (17) | 0.5801 (3) | 0.0746 (5) | |
H8A | 0.5485 | 0.8169 | 0.4846 | 0.089* | |
C9 | 0.58251 (11) | 0.91090 (18) | 0.6876 (3) | 0.0837 (6) | |
C10 | 0.66541 (16) | 0.9344 (4) | 0.6696 (6) | 0.0871 (10) | 0.785 (8) |
H10A | 0.6713 | 1.0139 | 0.6600 | 0.105* | 0.785 (8) |
H10B | 0.7002 | 0.9109 | 0.7762 | 0.105* | 0.785 (8) |
C11 | 0.69190 (18) | 0.8806 (3) | 0.5187 (5) | 0.0900 (11) | 0.785 (8) |
H11A | 0.6929 | 0.8008 | 0.5341 | 0.108* | 0.785 (8) |
H11B | 0.6550 | 0.8975 | 0.4118 | 0.108* | 0.785 (8) |
C12 | 0.77113 (18) | 0.9196 (3) | 0.5033 (6) | 0.0828 (10) | 0.785 (8) |
H12A | 0.7710 | 0.9863 | 0.4439 | 0.099* | 0.785 (8) |
C13 | 0.8396 (4) | 0.8782 (5) | 0.5571 (15) | 0.0811 (19) | 0.785 (8) |
C14 | 0.9134 (3) | 0.9352 (6) | 0.5393 (11) | 0.1003 (15) | 0.785 (8) |
H14A | 0.9011 | 1.0045 | 0.4798 | 0.150* | 0.785 (8) |
H14B | 0.9416 | 0.8891 | 0.4739 | 0.150* | 0.785 (8) |
H14C | 0.9448 | 0.9486 | 0.6529 | 0.150* | 0.785 (8) |
C15 | 0.8582 (5) | 0.7702 (6) | 0.6537 (11) | 0.162 (3) | 0.785 (8) |
H15A | 0.8121 | 0.7420 | 0.6863 | 0.242* | 0.785 (8) |
H15B | 0.8977 | 0.7823 | 0.7564 | 0.242* | 0.785 (8) |
H15C | 0.8766 | 0.7175 | 0.5797 | 0.242* | 0.785 (8) |
C10A | 0.6475 (6) | 0.9475 (14) | 0.5992 (19) | 0.0871 (10) | 0.215 (8) |
H10C | 0.6314 | 0.9371 | 0.4743 | 0.105* | 0.215 (8) |
H10D | 0.6577 | 1.0258 | 0.6210 | 0.105* | 0.215 (8) |
C11A | 0.7184 (8) | 0.8848 (17) | 0.663 (4) | 0.169 (13) | 0.215 (8) |
H11C | 0.7112 | 0.8104 | 0.6156 | 0.203* | 0.215 (8) |
H11D | 0.7257 | 0.8787 | 0.7887 | 0.203* | 0.215 (8) |
C12A | 0.7911 (7) | 0.9321 (12) | 0.620 (4) | 0.123 (7) | 0.215 (8) |
H12B | 0.7971 | 1.0081 | 0.6089 | 0.148* | 0.215 (8) |
C13A | 0.8464 (13) | 0.8625 (17) | 0.599 (5) | 0.080 (8) | 0.215 (8) |
C14A | 0.9212 (14) | 0.901 (3) | 0.562 (6) | 0.170 (16) | 0.215 (8) |
H14D | 0.9258 | 0.9793 | 0.5797 | 0.255* | 0.215 (8) |
H14E | 0.9232 | 0.8837 | 0.4434 | 0.255* | 0.215 (8) |
H14F | 0.9633 | 0.8641 | 0.6388 | 0.255* | 0.215 (8) |
C15A | 0.8294 (13) | 0.7391 (13) | 0.588 (4) | 0.137 (8) | 0.215 (8) |
H15D | 0.7743 | 0.7273 | 0.5742 | 0.206* | 0.215 (8) |
H15E | 0.8562 | 0.7036 | 0.6925 | 0.206* | 0.215 (8) |
H15F | 0.8468 | 0.7084 | 0.4895 | 0.206* | 0.215 (8) |
C16 | 0.56438 (16) | 0.9641 (3) | 0.8453 (4) | 0.1287 (12) | |
H16A | 0.5169 | 0.9337 | 0.8683 | 0.193* | |
H16B | 0.5584 | 1.0424 | 0.8265 | 0.193* | |
H16C | 0.6061 | 0.9505 | 0.9432 | 0.193* | |
H1N3 | 0.3250 (10) | 0.7786 (15) | 0.617 (2) | 0.063 (5)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0566 (6) | 0.0690 (7) | 0.0683 (7) | −0.0046 (5) | 0.0170 (5) | −0.0065 (5) |
N1 | 0.0508 (8) | 0.1053 (13) | 0.1165 (14) | −0.0154 (8) | 0.0259 (8) | −0.0068 (10) |
N2 | 0.0505 (7) | 0.0773 (9) | 0.0744 (8) | −0.0136 (6) | 0.0255 (6) | −0.0094 (7) |
N3 | 0.0465 (7) | 0.0721 (9) | 0.0658 (8) | −0.0116 (6) | 0.0201 (6) | −0.0093 (6) |
C1 | 0.0625 (10) | 0.0804 (13) | 0.1331 (18) | −0.0218 (10) | 0.0307 (11) | −0.0046 (12) |
C2 | 0.0580 (9) | 0.0658 (10) | 0.1026 (13) | −0.0102 (8) | 0.0223 (9) | −0.0010 (9) |
C3 | 0.0449 (7) | 0.0622 (9) | 0.0593 (8) | −0.0041 (6) | 0.0088 (6) | 0.0055 (7) |
C4 | 0.0483 (8) | 0.0737 (11) | 0.0836 (11) | −0.0076 (7) | 0.0132 (7) | −0.0115 (8) |
C5 | 0.0489 (9) | 0.0978 (14) | 0.1012 (14) | −0.0048 (9) | 0.0183 (9) | −0.0194 (11) |
C6 | 0.0462 (7) | 0.0559 (8) | 0.0584 (8) | −0.0027 (6) | 0.0113 (6) | 0.0051 (6) |
C7 | 0.0512 (8) | 0.0720 (10) | 0.0741 (10) | −0.0121 (7) | 0.0217 (7) | −0.0097 (8) |
C8 | 0.0554 (9) | 0.0845 (12) | 0.0895 (12) | −0.0165 (8) | 0.0281 (8) | −0.0174 (9) |
C9 | 0.0561 (10) | 0.0823 (13) | 0.1158 (15) | −0.0172 (9) | 0.0251 (10) | −0.0202 (11) |
C10 | 0.0477 (14) | 0.0936 (18) | 0.117 (3) | −0.0193 (15) | 0.0097 (16) | −0.015 (2) |
C11 | 0.0575 (16) | 0.111 (2) | 0.107 (2) | −0.0183 (15) | 0.0294 (15) | −0.0033 (18) |
C12 | 0.0540 (15) | 0.0843 (19) | 0.113 (2) | −0.0069 (13) | 0.0249 (15) | 0.0191 (18) |
C13 | 0.078 (3) | 0.077 (3) | 0.093 (4) | 0.007 (2) | 0.026 (2) | 0.018 (3) |
C14 | 0.0549 (18) | 0.110 (4) | 0.140 (3) | 0.004 (2) | 0.030 (2) | 0.001 (3) |
C15 | 0.162 (6) | 0.127 (5) | 0.209 (7) | 0.022 (4) | 0.068 (5) | 0.075 (5) |
C10A | 0.0477 (14) | 0.0936 (18) | 0.117 (3) | −0.0193 (15) | 0.0097 (16) | −0.015 (2) |
C11A | 0.081 (9) | 0.146 (15) | 0.29 (3) | 0.031 (9) | 0.064 (14) | 0.12 (2) |
C12A | 0.064 (7) | 0.086 (8) | 0.22 (2) | −0.013 (6) | 0.039 (11) | 0.026 (12) |
C13A | 0.072 (8) | 0.069 (9) | 0.11 (2) | 0.023 (6) | 0.037 (10) | 0.034 (8) |
C14A | 0.095 (14) | 0.12 (2) | 0.28 (4) | 0.012 (12) | 0.001 (16) | −0.03 (2) |
C15A | 0.121 (14) | 0.070 (9) | 0.20 (2) | 0.029 (9) | −0.008 (12) | −0.009 (10) |
C16 | 0.0951 (17) | 0.160 (3) | 0.137 (2) | −0.0471 (18) | 0.0378 (15) | −0.071 (2) |
O1—C6 | 1.2283 (18) | C12—C13 | 1.290 (7) |
N1—C5 | 1.318 (3) | C12—H12A | 0.9300 |
N1—C1 | 1.326 (3) | C13—C14 | 1.497 (6) |
N2—C7 | 1.280 (2) | C13—C15 | 1.510 (7) |
N2—N3 | 1.3903 (17) | C14—H14A | 0.9600 |
N3—C6 | 1.341 (2) | C14—H14B | 0.9600 |
N3—H1N3 | 0.873 (18) | C14—H14C | 0.9600 |
C1—C2 | 1.377 (2) | C15—H15A | 0.9600 |
C1—H1A | 0.9300 | C15—H15B | 0.9600 |
C2—C3 | 1.379 (2) | C15—H15C | 0.9600 |
C2—H2A | 0.9300 | C10A—C11A | 1.454 (14) |
C3—C4 | 1.375 (2) | C10A—H10C | 0.9700 |
C3—C6 | 1.4985 (18) | C10A—H10D | 0.9700 |
C4—C5 | 1.380 (2) | C11A—C12A | 1.497 (13) |
C4—H4A | 0.9300 | C11A—H11C | 0.9700 |
C5—H5A | 0.9300 | C11A—H11D | 0.9700 |
C7—C8 | 1.439 (2) | C12A—C13A | 1.320 (16) |
C7—H7A | 0.9300 | C12A—H12B | 0.9300 |
C8—C9 | 1.331 (3) | C13A—C14A | 1.474 (16) |
C8—H8A | 0.9300 | C13A—C15A | 1.518 (17) |
C9—C16 | 1.485 (3) | C14A—H14D | 0.9600 |
C9—C10 | 1.516 (2) | C14A—H14E | 0.9600 |
C9—C10A | 1.517 (3) | C14A—H14F | 0.9600 |
C10—C11 | 1.505 (4) | C15A—H15D | 0.9600 |
C10—H10A | 0.9700 | C15A—H15E | 0.9600 |
C10—H10B | 0.9700 | C15A—H15F | 0.9600 |
C11—C12 | 1.496 (4) | C16—H16A | 0.9600 |
C11—H11A | 0.9700 | C16—H16B | 0.9600 |
C11—H11B | 0.9700 | C16—H16C | 0.9600 |
C5—N1—C1 | 116.07 (15) | C12—C13—C15 | 126.1 (5) |
C7—N2—N3 | 113.78 (13) | C14—C13—C15 | 110.0 (6) |
C6—N3—N2 | 118.96 (13) | C13—C14—H14A | 109.5 |
C6—N3—H1N3 | 122.3 (12) | C13—C14—H14B | 109.5 |
N2—N3—H1N3 | 118.6 (12) | H14A—C14—H14B | 109.5 |
N1—C1—C2 | 124.24 (18) | C13—C14—H14C | 109.5 |
N1—C1—H1A | 117.9 | H14A—C14—H14C | 109.5 |
C2—C1—H1A | 117.9 | H14B—C14—H14C | 109.5 |
C1—C2—C3 | 118.98 (18) | C13—C15—H15A | 109.5 |
C1—C2—H2A | 120.5 | C13—C15—H15B | 109.5 |
C3—C2—H2A | 120.5 | H15A—C15—H15B | 109.5 |
C4—C3—C2 | 117.33 (14) | C13—C15—H15C | 109.5 |
C4—C3—C6 | 124.20 (14) | H15A—C15—H15C | 109.5 |
C2—C3—C6 | 118.40 (15) | H15B—C15—H15C | 109.5 |
C3—C4—C5 | 119.13 (17) | C11A—C10A—C9 | 111.1 (10) |
C3—C4—H4A | 120.4 | C11A—C10A—H10C | 109.4 |
C5—C4—H4A | 120.4 | C9—C10A—H10C | 109.4 |
N1—C5—C4 | 124.25 (18) | C11A—C10A—H10D | 109.4 |
N1—C5—H5A | 117.9 | C9—C10A—H10D | 109.4 |
C4—C5—H5A | 117.9 | H10C—C10A—H10D | 108.0 |
O1—C6—N3 | 123.05 (13) | C10A—C11A—C12A | 115.6 (10) |
O1—C6—C3 | 120.88 (13) | C10A—C11A—H11C | 108.4 |
N3—C6—C3 | 116.06 (13) | C12A—C11A—H11C | 108.4 |
N2—C7—C8 | 120.42 (15) | C10A—C11A—H11D | 108.4 |
N2—C7—H7A | 119.8 | C12A—C11A—H11D | 108.4 |
C8—C7—H7A | 119.8 | H11C—C11A—H11D | 107.5 |
C9—C8—C7 | 124.73 (17) | C13A—C12A—C11A | 117.9 (14) |
C9—C8—H8A | 117.6 | C13A—C12A—H12B | 121.0 |
C7—C8—H8A | 117.6 | C11A—C12A—H12B | 121.0 |
C8—C9—C16 | 123.28 (17) | C12A—C13A—C14A | 122.2 (17) |
C8—C9—C10 | 124.9 (2) | C12A—C13A—C15A | 119.4 (16) |
C16—C9—C10 | 111.7 (2) | C14A—C13A—C15A | 118.0 (18) |
C8—C9—C10A | 110.0 (7) | C13A—C14A—H14D | 109.5 |
C16—C9—C10A | 124.4 (7) | C13A—C14A—H14E | 109.5 |
C10—C9—C10A | 22.7 (5) | H14D—C14A—H14E | 109.5 |
C11—C10—C9 | 116.7 (3) | C13A—C14A—H14F | 109.5 |
C11—C10—H10A | 108.1 | H14D—C14A—H14F | 109.5 |
C9—C10—H10A | 108.1 | H14E—C14A—H14F | 109.5 |
C11—C10—H10B | 108.1 | C13A—C15A—H15D | 109.5 |
C9—C10—H10B | 108.1 | C13A—C15A—H15E | 109.5 |
H10A—C10—H10B | 107.3 | H15D—C15A—H15E | 109.5 |
C12—C11—C10 | 111.7 (3) | C13A—C15A—H15F | 109.5 |
C12—C11—H11A | 109.3 | H15D—C15A—H15F | 109.5 |
C10—C11—H11A | 109.3 | H15E—C15A—H15F | 109.5 |
C12—C11—H11B | 109.3 | C9—C16—H16A | 109.5 |
C10—C11—H11B | 109.3 | C9—C16—H16B | 109.5 |
H11A—C11—H11B | 107.9 | H16A—C16—H16B | 109.5 |
C13—C12—C11 | 132.1 (4) | C9—C16—H16C | 109.5 |
C13—C12—H12A | 113.9 | H16A—C16—H16C | 109.5 |
C11—C12—H12A | 113.9 | H16B—C16—H16C | 109.5 |
C12—C13—C14 | 123.8 (6) | ||
C7—N2—N3—C6 | −172.49 (15) | C7—C8—C9—C16 | 0.4 (4) |
C5—N1—C1—C2 | −0.2 (4) | C7—C8—C9—C10 | 177.8 (3) |
N1—C1—C2—C3 | 0.0 (4) | C7—C8—C9—C10A | −162.8 (6) |
C1—C2—C3—C4 | 0.0 (3) | C8—C9—C10—C11 | −0.3 (6) |
C1—C2—C3—C6 | −177.16 (18) | C16—C9—C10—C11 | 177.4 (4) |
C2—C3—C4—C5 | 0.1 (3) | C10A—C9—C10—C11 | −54.2 (19) |
C6—C3—C4—C5 | 177.14 (16) | C9—C10—C11—C12 | 173.7 (3) |
C1—N1—C5—C4 | 0.3 (3) | C10—C11—C12—C13 | 96.6 (9) |
C3—C4—C5—N1 | −0.3 (3) | C11—C12—C13—C14 | −175.3 (6) |
N2—N3—C6—O1 | −0.3 (2) | C11—C12—C13—C15 | 1.4 (15) |
N2—N3—C6—C3 | −179.34 (13) | C8—C9—C10A—C11A | −103 (2) |
C4—C3—C6—O1 | −149.52 (17) | C16—C9—C10A—C11A | 94 (2) |
C2—C3—C6—O1 | 27.5 (2) | C10—C9—C10A—C11A | 31.7 (18) |
C4—C3—C6—N3 | 29.5 (2) | C9—C10A—C11A—C12A | −165.1 (17) |
C2—C3—C6—N3 | −153.47 (16) | C10A—C11A—C12A—C13A | −149 (3) |
N3—N2—C7—C8 | −179.95 (16) | C11A—C12A—C13A—C14A | −178 (3) |
N2—C7—C8—C9 | 179.4 (2) | C11A—C12A—C13A—C15A | 10 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1N3···O1i | 0.873 (17) | 2.052 (17) | 2.9167 (18) | 170.8 (16) |
C4—H4A···O1i | 0.93 | 2.53 | 3.251 (2) | 135 |
Symmetry code: (i) x, −y+3/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C16H21N3O |
Mr | 271.36 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 296 |
a, b, c (Å) | 17.5415 (8), 12.0708 (6), 7.8430 (4) |
β (°) | 101.854 (3) |
V (Å3) | 1625.26 (14) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 0.56 |
Crystal size (mm) | 0.90 × 0.27 × 0.17 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.633, 0.912 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16548, 2978, 2376 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.608 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.154, 1.03 |
No. of reflections | 2978 |
No. of parameters | 239 |
No. of restraints | 12 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.13, −0.14 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1N3···O1i | 0.873 (17) | 2.052 (17) | 2.9167 (18) | 170.8 (16) |
C4—H4A···O1i | 0.9300 | 2.5300 | 3.251 (2) | 135.00 |
Symmetry code: (i) x, −y+3/2, z+1/2. |
Footnotes
‡College of Pharmacy (Visiting Professor), King Saud University, PO Box 2457, Riyadh 11451, Saudi Arabia. Thomson Reuters ResearcherID: A-3561-2009.
Acknowledgements
MAB, HAA and HAG thank the Deanship of Scientific Research and the Research Center, College of Pharmacy, King Saud University. MH and HFK thank the Malaysian Government and Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160. MH also thanks Universiti Sains Malaysia for a post-doctoral research fellowship.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
In the search of new compounds, isoniazid derivatives have been found to possess potential tuberculostatic activity (Janin, 2007; Maccari et al., 2005; Slayden & Barry, 2000; Hearn et al., 2009; Tripathi et al., 2011). The crystal structures of (E)-N'- (2-Benzyloxybenzylidene)isonicotinohydrazide methanol solvate monohydrate (Naveenkumar et al., 2010), N'-(1-Phenylethylidene)isonicotino hydrazide (Jiang et al., 2009) and N'-(4-Bromophenylsulfonyl) isonicotinohydrazide (Khan et al., 2009) have been reported in the literature. Here, we present the crystal structure of the title compound, (I).
The asymmetric unit of the title compound is shown in Fig. 1. The molecule adopts an E configuration about the central C7═N2 double bond. The 2-methylpent-2-ene group is disordered over two sets of sites, with a refined occupancy ratio of 0.785 (8):0.215 (8). The dihedral angles between the major and minor components of the 2-methylbut-2-ene (C11–C15:C11A–C15A) group is 35.9 (13)°.
In the crystal, Fig. 2, the adjacent molecules are connected via bifurcated N—H···O and C—H···O hydrogen bonds (Table 1), generating R12(7) ring motifs (Bernstein et al., 1995), resulting in supramolecular [001] chains.