organic compounds
4-(Dimethoxymethyl)phenyl 2,3,4,6-tetra-O-acetyl-β-D-glucopyranoside
aMolecular Sciences Institute, School of Chemistry, University of the Witwatersrand, PO Wits 2050, Johannesburg, South Africa
*Correspondence e-mail: Helder.Marques@wits.ac.za
The enantiomerically pure title compound, C23H30O12, crystallizes in the P212121. The O-acetylated-glucopyranoside moiety adopts a chair conformation. Numerous C—H⋯O interactions as well as a C—H⋯π interaction are present in the crystal structure.
Related literature
For similar compounds, see: Bin et al. (2008); Ansari et al. (2006). For the use of sugars as water-solubilizing agents in macrocycle chemistry, see: Sol et al. (1997); Maillard et al. (1993); Oulmi et al. (1995). For the role of sugars in biological systems, especially proteins, see: Floyd et al. (2009).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and SCHAKAL99 (Keller, 1999); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Supporting information
10.1107/S160053681201121X/mw2057sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681201121X/mw2057Isup2.hkl
The title compound was synthesized from p-hydroxybenzaldehyde and 2,3,4,6-tetra-O-acetyl-α-D-glucopyranosyl bromide in the presence of NaOH. The product was purified by and recrystallized from acidified methanol to yield colourless plate-like crystals.
All H atoms were positioned geometrically, and allowed to ride on their parent atoms. Hydrogen bond lengths were set as follows: C—H = 0.95 Å (Aromatic C—H), 1.00 Å (Methine C—H) 0.99 Å (CH2) or 0.98 Å (CH3). Isotropic displacement parameters for these atoms were set as 1.2 times Ueq of the parent atom for CH and CH2, and 1.5 times Ueq of the parent atom for CH3.
Glycosylation is common in nature, with a large proportion of all proteins bearing sugar residues (Floyd et al., 2009). The title compound was synthesized as a precursor to a biomimetic model for vitamin B12a (aquacobalamin) as sugars can play a useful role in the solubilizing of large organic systems, such as glycosylated
(Sol et al., 1997; Maillard et al., 1993; Oulmi et al., 1995).For similar compounds, see: Bin et al. (2008); Ansari et al. (2006). For the use of sugars as water-solubilizing agents in macrocycle chemistry, see: Sol et al. (1997); Maillard et al. (1993); Oulmi et al. (1995). For the role of sugars in biological systems, especially proteins, see: Floyd et al. (2009).
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and SCHAKAL99 (Keller, 1999); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).Fig. 1. The molecular structure of (I). Displacement ellipsoids are drawn at the 50% probability level. | |
Fig. 2. Weak hydrogen bonding in the strucuture of (I). Four of the five C—H···O interactions listed in Table 1 are shown, while the location of the C—H···π interactions is indicated with a #. |
C23H30O12 | F(000) = 1056 |
Mr = 498.47 | Dx = 1.304 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 3488 reflections |
a = 7.9004 (2) Å | θ = 2.3–24.0° |
b = 10.9961 (3) Å | µ = 0.11 mm−1 |
c = 29.2289 (8) Å | T = 173 K |
V = 2539.22 (12) Å3 | Plate, colourless |
Z = 4 | 0.45 × 0.32 × 0.10 mm |
Bruker APEXII CCD diffractometer | 2644 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.053 |
Graphite monochromator | θmax = 28.0°, θmin = 2.0° |
φ and ω scans | h = −10→10 |
13406 measured reflections | k = −10→14 |
3493 independent reflections | l = −38→37 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 0.97 | w = 1/[σ2(Fo2) + (0.0567P)2] where P = (Fo2 + 2Fc2)/3 |
3493 reflections | (Δ/σ)max = 0.001 |
322 parameters | Δρmax = 0.25 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C23H30O12 | V = 2539.22 (12) Å3 |
Mr = 498.47 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 7.9004 (2) Å | µ = 0.11 mm−1 |
b = 10.9961 (3) Å | T = 173 K |
c = 29.2289 (8) Å | 0.45 × 0.32 × 0.10 mm |
Bruker APEXII CCD diffractometer | 2644 reflections with I > 2σ(I) |
13406 measured reflections | Rint = 0.053 |
3493 independent reflections |
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 0.97 | Δρmax = 0.25 e Å−3 |
3493 reflections | Δρmin = −0.20 e Å−3 |
322 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R- factor wR and goodness of fit S are based on F2; conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.0801 (3) | 0.3057 (2) | 0.12632 (8) | 0.0238 (5) | |
H1 | 0.0113 | 0.2457 | 0.1086 | 0.029* | |
C2 | 0.2410 (3) | 0.3384 (2) | 0.10042 (8) | 0.0219 (5) | |
H2 | 0.3164 | 0.3905 | 0.1197 | 0.026* | |
C3 | 0.1944 (3) | 0.4037 (2) | 0.05649 (8) | 0.0225 (5) | |
H3 | 0.1373 | 0.3461 | 0.0350 | 0.027* | |
C4 | 0.0790 (3) | 0.5105 (2) | 0.06664 (8) | 0.0236 (5) | |
H4 | 0.1420 | 0.5753 | 0.0836 | 0.028* | |
C5 | −0.0749 (3) | 0.4686 (2) | 0.09422 (8) | 0.0254 (5) | |
H5 | −0.1399 | 0.4077 | 0.0759 | 0.031* | |
C6 | −0.1907 (3) | 0.5704 (2) | 0.10783 (9) | 0.0313 (6) | |
H6A | −0.2358 | 0.6113 | 0.0802 | 0.038* | |
H6B | −0.2873 | 0.5381 | 0.1257 | 0.038* | |
C7 | 0.0063 (3) | 0.1934 (2) | 0.19310 (8) | 0.0266 (5) | |
C8 | 0.0622 (4) | 0.1381 (2) | 0.23282 (9) | 0.0355 (7) | |
H8 | 0.1776 | 0.1437 | 0.2417 | 0.043* | |
C9 | −0.0526 (4) | 0.0745 (3) | 0.25957 (9) | 0.0389 (7) | |
H9 | −0.0149 | 0.0360 | 0.2868 | 0.047* | |
C10 | −0.2229 (4) | 0.0663 (2) | 0.24709 (9) | 0.0349 (6) | |
C11 | −0.2725 (4) | 0.1186 (2) | 0.20664 (10) | 0.0353 (6) | |
H11 | −0.3865 | 0.1100 | 0.1968 | 0.042* | |
C12 | −0.1597 (4) | 0.1839 (2) | 0.17970 (9) | 0.0339 (6) | |
H12 | −0.1971 | 0.2217 | 0.1523 | 0.041* | |
C13 | −0.3436 (4) | −0.0023 (3) | 0.27751 (10) | 0.0439 (7) | |
H13 | −0.3008 | −0.0875 | 0.2804 | 0.053* | |
C14 | −0.4138 (6) | 0.1676 (3) | 0.32407 (12) | 0.0660 (11) | |
H14A | −0.3371 | 0.2205 | 0.3068 | 0.099* | |
H14B | −0.4181 | 0.1944 | 0.3560 | 0.099* | |
H14C | −0.5274 | 0.1718 | 0.3107 | 0.099* | |
C15 | −0.6115 (6) | −0.0935 (3) | 0.27581 (13) | 0.0679 (11) | |
H15A | −0.5587 | −0.1741 | 0.2746 | 0.102* | |
H15B | −0.7182 | −0.0950 | 0.2587 | 0.102* | |
H15C | −0.6340 | −0.0716 | 0.3077 | 0.102* | |
C16 | 0.4919 (4) | 0.2178 (2) | 0.09375 (8) | 0.0284 (6) | |
C17 | 0.5515 (4) | 0.0911 (2) | 0.08455 (10) | 0.0428 (7) | |
H17A | 0.6752 | 0.0882 | 0.0865 | 0.064* | |
H17B | 0.5154 | 0.0662 | 0.0539 | 0.064* | |
H17C | 0.5027 | 0.0357 | 0.1073 | 0.064* | |
C18 | 0.4204 (3) | 0.3879 (2) | 0.00160 (8) | 0.0268 (5) | |
C19 | 0.5757 (4) | 0.4516 (2) | −0.01518 (10) | 0.0395 (7) | |
H19A | 0.6324 | 0.4009 | −0.0381 | 0.059* | |
H19B | 0.6527 | 0.4660 | 0.0106 | 0.059* | |
H19C | 0.5438 | 0.5296 | −0.0289 | 0.059* | |
C20 | 0.0206 (4) | 0.6785 (2) | 0.01657 (9) | 0.0329 (6) | |
C21 | −0.0371 (5) | 0.7100 (3) | −0.03023 (10) | 0.0481 (8) | |
H21A | −0.0692 | 0.7960 | −0.0313 | 0.072* | |
H21B | −0.1350 | 0.6597 | −0.0383 | 0.072* | |
H21C | 0.0548 | 0.6951 | −0.0520 | 0.072* | |
C22 | −0.1382 (4) | 0.7733 (3) | 0.13249 (11) | 0.0464 (8) | |
C23 | −0.0184 (5) | 0.8508 (3) | 0.15844 (13) | 0.0651 (11) | |
H23A | 0.0782 | 0.8716 | 0.1389 | 0.098* | |
H23B | 0.0216 | 0.8066 | 0.1855 | 0.098* | |
H23C | −0.0759 | 0.9255 | 0.1681 | 0.098* | |
O1 | −0.0151 (2) | 0.41192 (14) | 0.13529 (5) | 0.0264 (4) | |
O2 | 0.1293 (2) | 0.25639 (15) | 0.16843 (5) | 0.0283 (4) | |
O3 | 0.3219 (2) | 0.22387 (14) | 0.09025 (5) | 0.0257 (4) | |
O4 | 0.5794 (3) | 0.30351 (17) | 0.10281 (7) | 0.0401 (5) | |
O5 | 0.3456 (2) | 0.45309 (14) | 0.03546 (5) | 0.0249 (4) | |
O6 | 0.3683 (3) | 0.29251 (16) | −0.01228 (6) | 0.0401 (5) | |
O7 | 0.0199 (2) | 0.55613 (14) | 0.02296 (5) | 0.0280 (4) | |
O8 | 0.0625 (3) | 0.74887 (16) | 0.04572 (7) | 0.0538 (6) | |
O9 | −0.0958 (3) | 0.65541 (15) | 0.13508 (6) | 0.0370 (5) | |
O10 | −0.2594 (4) | 0.8089 (2) | 0.11206 (10) | 0.0741 (8) | |
O11 | −0.3548 (3) | 0.0473 (2) | 0.32214 (7) | 0.0566 (6) | |
O12 | −0.5013 (3) | −0.00697 (19) | 0.25616 (7) | 0.0510 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0264 (13) | 0.0235 (11) | 0.0216 (12) | −0.0017 (11) | −0.0011 (11) | −0.0001 (9) |
C2 | 0.0204 (12) | 0.0216 (11) | 0.0235 (12) | 0.0004 (10) | 0.0008 (10) | −0.0046 (9) |
C3 | 0.0225 (12) | 0.0197 (11) | 0.0253 (12) | −0.0027 (10) | 0.0022 (11) | −0.0003 (9) |
C4 | 0.0265 (13) | 0.0213 (11) | 0.0230 (12) | 0.0000 (11) | 0.0013 (11) | −0.0005 (9) |
C5 | 0.0247 (13) | 0.0257 (11) | 0.0259 (12) | 0.0010 (10) | −0.0008 (11) | 0.0006 (9) |
C6 | 0.0295 (15) | 0.0337 (13) | 0.0309 (14) | 0.0078 (12) | 0.0020 (12) | −0.0011 (11) |
C7 | 0.0297 (14) | 0.0253 (11) | 0.0248 (12) | 0.0009 (11) | 0.0044 (11) | 0.0003 (10) |
C8 | 0.0360 (16) | 0.0430 (15) | 0.0276 (14) | −0.0015 (13) | −0.0046 (13) | 0.0055 (11) |
C9 | 0.046 (2) | 0.0437 (16) | 0.0270 (14) | 0.0015 (14) | −0.0033 (13) | 0.0115 (12) |
C10 | 0.0400 (17) | 0.0347 (14) | 0.0299 (14) | 0.0026 (13) | 0.0057 (13) | 0.0056 (11) |
C11 | 0.0287 (14) | 0.0391 (14) | 0.0382 (16) | 0.0037 (12) | 0.0046 (13) | 0.0074 (12) |
C12 | 0.0332 (16) | 0.0394 (14) | 0.0290 (14) | 0.0050 (13) | 0.0043 (12) | 0.0097 (11) |
C13 | 0.0493 (19) | 0.0431 (16) | 0.0393 (17) | 0.0007 (15) | 0.0052 (15) | 0.0149 (13) |
C14 | 0.074 (3) | 0.065 (2) | 0.059 (2) | −0.012 (2) | 0.029 (2) | −0.0096 (17) |
C15 | 0.076 (3) | 0.062 (2) | 0.066 (2) | −0.023 (2) | 0.017 (2) | 0.0088 (18) |
C16 | 0.0278 (14) | 0.0338 (13) | 0.0237 (13) | 0.0067 (12) | −0.0010 (11) | 0.0011 (10) |
C17 | 0.0434 (18) | 0.0376 (14) | 0.0474 (17) | 0.0151 (14) | 0.0015 (15) | −0.0033 (13) |
C18 | 0.0295 (13) | 0.0244 (11) | 0.0265 (13) | 0.0036 (11) | 0.0040 (12) | 0.0005 (9) |
C19 | 0.0407 (16) | 0.0323 (13) | 0.0455 (16) | 0.0004 (13) | 0.0207 (15) | −0.0010 (12) |
C20 | 0.0327 (15) | 0.0252 (12) | 0.0409 (15) | 0.0023 (11) | 0.0092 (13) | 0.0066 (11) |
C21 | 0.067 (2) | 0.0324 (14) | 0.0452 (17) | 0.0067 (15) | 0.0005 (17) | 0.0119 (13) |
C22 | 0.052 (2) | 0.0367 (15) | 0.0510 (18) | 0.0163 (15) | 0.0011 (17) | −0.0032 (14) |
C23 | 0.077 (3) | 0.0392 (16) | 0.079 (3) | 0.0126 (19) | −0.018 (2) | −0.0202 (17) |
O1 | 0.0287 (10) | 0.0289 (8) | 0.0217 (8) | 0.0038 (7) | 0.0024 (8) | 0.0015 (7) |
O2 | 0.0272 (10) | 0.0340 (9) | 0.0236 (9) | −0.0010 (8) | 0.0008 (8) | 0.0046 (7) |
O3 | 0.0257 (10) | 0.0223 (8) | 0.0291 (9) | 0.0039 (7) | −0.0011 (8) | −0.0021 (7) |
O4 | 0.0261 (10) | 0.0378 (10) | 0.0564 (13) | 0.0012 (9) | −0.0027 (10) | −0.0023 (9) |
O5 | 0.0251 (9) | 0.0213 (7) | 0.0283 (9) | −0.0018 (7) | 0.0070 (8) | −0.0022 (7) |
O6 | 0.0433 (12) | 0.0332 (10) | 0.0439 (11) | −0.0046 (9) | 0.0128 (10) | −0.0138 (8) |
O7 | 0.0336 (10) | 0.0221 (8) | 0.0283 (9) | 0.0029 (7) | −0.0002 (8) | 0.0025 (7) |
O8 | 0.0837 (18) | 0.0234 (9) | 0.0542 (13) | −0.0053 (11) | −0.0061 (13) | 0.0034 (9) |
O9 | 0.0466 (12) | 0.0302 (9) | 0.0343 (10) | 0.0134 (9) | −0.0038 (10) | −0.0072 (7) |
O10 | 0.0699 (18) | 0.0433 (12) | 0.109 (2) | 0.0250 (13) | −0.0303 (16) | −0.0047 (13) |
O11 | 0.0628 (16) | 0.0706 (15) | 0.0365 (12) | −0.0076 (14) | 0.0116 (11) | 0.0106 (11) |
O12 | 0.0476 (13) | 0.0543 (13) | 0.0511 (13) | −0.0148 (12) | 0.0048 (11) | 0.0135 (10) |
C1—O2 | 1.400 (3) | C13—H13 | 1.0000 |
C1—O1 | 1.414 (3) | C14—O11 | 1.404 (4) |
C1—C2 | 1.522 (3) | C14—H14A | 0.9800 |
C1—H1 | 1.0000 | C14—H14B | 0.9800 |
C2—O3 | 1.444 (3) | C14—H14C | 0.9800 |
C2—C3 | 1.516 (3) | C15—O12 | 1.412 (4) |
C2—H2 | 1.0000 | C15—H15A | 0.9800 |
C3—O5 | 1.449 (3) | C15—H15B | 0.9800 |
C3—C4 | 1.516 (3) | C15—H15C | 0.9800 |
C3—H3 | 1.0000 | C16—O4 | 1.198 (3) |
C4—O7 | 1.449 (3) | C16—O3 | 1.348 (3) |
C4—C5 | 1.530 (3) | C16—C17 | 1.495 (3) |
C4—H4 | 1.0000 | C17—H17A | 0.9800 |
C5—O1 | 1.433 (3) | C17—H17B | 0.9800 |
C5—C6 | 1.500 (3) | C17—H17C | 0.9800 |
C5—H5 | 1.0000 | C18—O6 | 1.198 (3) |
C6—O9 | 1.439 (3) | C18—O5 | 1.357 (3) |
C6—H6A | 0.9900 | C18—C19 | 1.495 (4) |
C6—H6B | 0.9900 | C19—H19A | 0.9800 |
C7—C12 | 1.373 (4) | C19—H19B | 0.9800 |
C7—C8 | 1.383 (4) | C19—H19C | 0.9800 |
C7—O2 | 1.394 (3) | C20—O8 | 1.198 (3) |
C8—C9 | 1.387 (4) | C20—O7 | 1.359 (3) |
C8—H8 | 0.9500 | C20—C21 | 1.483 (4) |
C9—C10 | 1.397 (4) | C21—H21A | 0.9800 |
C9—H9 | 0.9500 | C21—H21B | 0.9800 |
C10—C11 | 1.372 (4) | C21—H21C | 0.9800 |
C10—C13 | 1.506 (4) | C22—O10 | 1.195 (4) |
C11—C12 | 1.390 (4) | C22—O9 | 1.341 (3) |
C11—H11 | 0.9500 | C22—C23 | 1.482 (5) |
C12—H12 | 0.9500 | C23—H23A | 0.9800 |
C13—O12 | 1.395 (4) | C23—H23B | 0.9800 |
C13—O11 | 1.417 (4) | C23—H23C | 0.9800 |
O2—C1—O1 | 107.73 (17) | O11—C13—H13 | 107.8 |
O2—C1—C2 | 107.29 (19) | C10—C13—H13 | 107.8 |
O1—C1—C2 | 109.94 (18) | O11—C14—H14A | 109.5 |
O2—C1—H1 | 110.6 | O11—C14—H14B | 109.5 |
O1—C1—H1 | 110.6 | H14A—C14—H14B | 109.5 |
C2—C1—H1 | 110.6 | O11—C14—H14C | 109.5 |
O3—C2—C3 | 110.26 (18) | H14A—C14—H14C | 109.5 |
O3—C2—C1 | 105.40 (17) | H14B—C14—H14C | 109.5 |
C3—C2—C1 | 109.29 (19) | O12—C15—H15A | 109.5 |
O3—C2—H2 | 110.6 | O12—C15—H15B | 109.5 |
C3—C2—H2 | 110.6 | H15A—C15—H15B | 109.5 |
C1—C2—H2 | 110.6 | O12—C15—H15C | 109.5 |
O5—C3—C4 | 106.76 (17) | H15A—C15—H15C | 109.5 |
O5—C3—C2 | 109.66 (19) | H15B—C15—H15C | 109.5 |
C4—C3—C2 | 110.31 (18) | O4—C16—O3 | 123.5 (2) |
O5—C3—H3 | 110.0 | O4—C16—C17 | 126.2 (3) |
C4—C3—H3 | 110.0 | O3—C16—C17 | 110.2 (2) |
C2—C3—H3 | 110.0 | C16—C17—H17A | 109.5 |
O7—C4—C3 | 106.83 (17) | C16—C17—H17B | 109.5 |
O7—C4—C5 | 108.2 (2) | H17A—C17—H17B | 109.5 |
C3—C4—C5 | 110.31 (18) | C16—C17—H17C | 109.5 |
O7—C4—H4 | 110.5 | H17A—C17—H17C | 109.5 |
C3—C4—H4 | 110.5 | H17B—C17—H17C | 109.5 |
C5—C4—H4 | 110.5 | O6—C18—O5 | 124.0 (2) |
O1—C5—C6 | 107.67 (18) | O6—C18—C19 | 125.5 (2) |
O1—C5—C4 | 108.10 (19) | O5—C18—C19 | 110.4 (2) |
C6—C5—C4 | 113.56 (19) | C18—C19—H19A | 109.5 |
O1—C5—H5 | 109.1 | C18—C19—H19B | 109.5 |
C6—C5—H5 | 109.1 | H19A—C19—H19B | 109.5 |
C4—C5—H5 | 109.1 | C18—C19—H19C | 109.5 |
O9—C6—C5 | 108.3 (2) | H19A—C19—H19C | 109.5 |
O9—C6—H6A | 110.0 | H19B—C19—H19C | 109.5 |
C5—C6—H6A | 110.0 | O8—C20—O7 | 122.9 (2) |
O9—C6—H6B | 110.0 | O8—C20—C21 | 126.2 (2) |
C5—C6—H6B | 110.0 | O7—C20—C21 | 110.9 (2) |
H6A—C6—H6B | 108.4 | C20—C21—H21A | 109.5 |
C12—C7—C8 | 120.7 (2) | C20—C21—H21B | 109.5 |
C12—C7—O2 | 123.8 (2) | H21A—C21—H21B | 109.5 |
C8—C7—O2 | 115.5 (2) | C20—C21—H21C | 109.5 |
C7—C8—C9 | 119.1 (3) | H21A—C21—H21C | 109.5 |
C7—C8—H8 | 120.5 | H21B—C21—H21C | 109.5 |
C9—C8—H8 | 120.5 | O10—C22—O9 | 123.0 (3) |
C8—C9—C10 | 121.0 (2) | O10—C22—C23 | 125.4 (3) |
C8—C9—H9 | 119.5 | O9—C22—C23 | 111.6 (3) |
C10—C9—H9 | 119.5 | C22—C23—H23A | 109.5 |
C11—C10—C9 | 118.2 (3) | C22—C23—H23B | 109.5 |
C11—C10—C13 | 122.5 (3) | H23A—C23—H23B | 109.5 |
C9—C10—C13 | 119.2 (2) | C22—C23—H23C | 109.5 |
C10—C11—C12 | 121.5 (3) | H23A—C23—H23C | 109.5 |
C10—C11—H11 | 119.3 | H23B—C23—H23C | 109.5 |
C12—C11—H11 | 119.3 | C1—O1—C5 | 112.28 (16) |
C7—C12—C11 | 119.4 (2) | C7—O2—C1 | 117.00 (19) |
C7—C12—H12 | 120.3 | C16—O3—C2 | 117.93 (19) |
C11—C12—H12 | 120.3 | C18—O5—C3 | 118.07 (18) |
O12—C13—O11 | 111.7 (3) | C20—O7—C4 | 117.55 (19) |
O12—C13—C10 | 108.7 (2) | C22—O9—C6 | 117.8 (2) |
O11—C13—C10 | 113.0 (2) | C14—O11—C13 | 114.9 (2) |
O12—C13—H13 | 107.8 | C13—O12—C15 | 113.2 (3) |
O2—C1—C2—O3 | 67.0 (2) | C11—C10—C13—O11 | −121.4 (3) |
O1—C1—C2—O3 | −176.06 (17) | C9—C10—C13—O11 | 60.5 (4) |
O2—C1—C2—C3 | −174.46 (17) | O2—C1—O1—C5 | −178.82 (18) |
O1—C1—C2—C3 | −57.6 (2) | C2—C1—O1—C5 | 64.6 (2) |
O3—C2—C3—O5 | −74.1 (2) | C6—C5—O1—C1 | 173.20 (19) |
C1—C2—C3—O5 | 170.47 (17) | C4—C5—O1—C1 | −63.7 (2) |
O3—C2—C3—C4 | 168.59 (18) | C12—C7—O2—C1 | −4.1 (3) |
C1—C2—C3—C4 | 53.2 (2) | C8—C7—O2—C1 | 175.4 (2) |
O5—C3—C4—O7 | 69.5 (2) | O1—C1—O2—C7 | 76.8 (2) |
C2—C3—C4—O7 | −171.43 (18) | C2—C1—O2—C7 | −164.91 (18) |
O5—C3—C4—C5 | −173.12 (18) | O4—C16—O3—C2 | −3.5 (4) |
C2—C3—C4—C5 | −54.0 (3) | C17—C16—O3—C2 | 176.82 (19) |
O7—C4—C5—O1 | 174.03 (16) | C3—C2—O3—C16 | 101.6 (2) |
C3—C4—C5—O1 | 57.5 (2) | C1—C2—O3—C16 | −140.5 (2) |
O7—C4—C5—C6 | −66.6 (2) | O6—C18—O5—C3 | 0.7 (3) |
C3—C4—C5—C6 | 176.9 (2) | C19—C18—O5—C3 | −178.8 (2) |
O1—C5—C6—O9 | 60.3 (2) | C4—C3—O5—C18 | −143.3 (2) |
C4—C5—C6—O9 | −59.4 (3) | C2—C3—O5—C18 | 97.2 (2) |
C12—C7—C8—C9 | −1.2 (4) | O8—C20—O7—C4 | −2.4 (4) |
O2—C7—C8—C9 | 179.4 (2) | C21—C20—O7—C4 | 177.8 (2) |
C7—C8—C9—C10 | −0.4 (4) | C3—C4—O7—C20 | −135.4 (2) |
C8—C9—C10—C11 | 2.7 (4) | C5—C4—O7—C20 | 105.8 (2) |
C8—C9—C10—C13 | −179.2 (3) | O10—C22—O9—C6 | 6.9 (5) |
C9—C10—C11—C12 | −3.5 (4) | C23—C22—O9—C6 | −173.9 (3) |
C13—C10—C11—C12 | 178.5 (3) | C5—C6—O9—C22 | 148.1 (2) |
C8—C7—C12—C11 | 0.4 (4) | O12—C13—O11—C14 | −61.7 (3) |
O2—C7—C12—C11 | 179.8 (2) | C10—C13—O11—C14 | 61.2 (4) |
C10—C11—C12—C7 | 2.0 (4) | O11—C13—O12—C15 | −69.5 (3) |
C11—C10—C13—O12 | 3.2 (4) | C10—C13—O12—C15 | 165.2 (3) |
C9—C10—C13—O12 | −174.9 (3) |
Cg is the centroid of the C7–C12 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···O11i | 1.00 | 2.44 | 3.347 (3) | 151 |
C12—H12···O4ii | 0.95 | 2.45 | 3.321 (3) | 152 |
C19—H19A···O3iii | 0.98 | 2.54 | 3.510 (3) | 171 |
C19—H19C···O8iv | 0.98 | 2.49 | 3.414 (3) | 157 |
C21—H21C···O10iv | 0.98 | 2.29 | 3.252 (4) | 168 |
C23—H23C···Cgv | 0.98 | 2.71 | 3.615 (4) | 153 |
Symmetry codes: (i) −x, y+1/2, −z+1/2; (ii) x−1, y, z; (iii) x+1/2, −y+1/2, −z; (iv) x+1/2, −y+3/2, −z; (v) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | C23H30O12 |
Mr | 498.47 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 173 |
a, b, c (Å) | 7.9004 (2), 10.9961 (3), 29.2289 (8) |
V (Å3) | 2539.22 (12) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.45 × 0.32 × 0.10 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13406, 3493, 2644 |
Rint | 0.053 |
(sin θ/λ)max (Å−1) | 0.661 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.102, 0.97 |
No. of reflections | 3493 |
No. of parameters | 322 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.25, −0.20 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and SCHAKAL99 (Keller, 1999), WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Cg is the centroid of the C7–C12 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···O11i | 1.00 | 2.44 | 3.347 (3) | 151 |
C12—H12···O4ii | 0.95 | 2.45 | 3.321 (3) | 152 |
C19—H19A···O3iii | 0.98 | 2.54 | 3.510 (3) | 171 |
C19—H19C···O8iv | 0.98 | 2.49 | 3.414 (3) | 157 |
C21—H21C···O10iv | 0.98 | 2.29 | 3.252 (4) | 168 |
C23—H23C···Cgv | 0.98 | 2.71 | 3.615 (4) | 153 |
Symmetry codes: (i) −x, y+1/2, −z+1/2; (ii) x−1, y, z; (iii) x+1/2, −y+1/2, −z; (iv) x+1/2, −y+3/2, −z; (v) x, y+1, z. |
Acknowledgements
This work was supported by the National Research Foundation, Pretoria (NRF, GUN 2053652), the South African Research Chairs Initiative and the University of the Witwatersrand.
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Glycosylation is common in nature, with a large proportion of all proteins bearing sugar residues (Floyd et al., 2009). The title compound was synthesized as a precursor to a biomimetic model for vitamin B12a (aquacobalamin) as sugars can play a useful role in the solubilizing of large organic systems, such as glycosylated porphyrins (Sol et al., 1997; Maillard et al., 1993; Oulmi et al., 1995).