organic compounds
3,6-Dibromo-7-ethylamino-4-methyl-2H-chromen-2-one
aKey Laboratory of Fine Chemical Engineering, Changzhou University, Changzhou 213164, Jiangsu, People's Republic of China
*Correspondence e-mail: xht@cczu.edu.cn
In title compound, C12H11Br2NO2, the coumarin ring system is almost planar, the two rings being inclined to one another by 1.40 (15)°. There are two short intramolecular interactions (N—H⋯Br and C—H⋯Br) involving the Br atoms. In the crystal, molecules stack along the a-axis direction via π–π interactions; the centroid–centroid distances vary from 3.6484 (19) to 3.7942 (19) Å.
Related literature
For the synthesis of the title compound, see: Belluti et al. (2010). For geometrical details of a coumarin compound, see: Kruszynski et al. (2005).
Experimental
Crystal data
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Refinement
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Data collection: CAD-4 Software (Enraf–Nonius, 1985); cell CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S160053681201077X/su2385sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681201077X/su2385Isup2.hkl
Supporting information file. DOI: 10.1107/S160053681201077X/su2385Isup3.cml
The title compound was prepared by the method reported by (Belluti et al., 2010). To a suspension of 4-methyl-7-N,N-diethylamino coumarin (5 mmol, 1.61 g) and bromosuccinimide (6 mmol, 1.06 g) in carbon tetrachloride (50 ml), a catalytic amount of benzoyl peroxide was added. The reaction mixture was refluxed for 8 h, then the succinimide produced during the reaction was filtered off. The resulting mixture was washed with water, dried and the solvent was removed under reduced pressure. The pale yellow product obtained was recrystallized from ethanol, yielding colourless block-like crystals of the title compound on evaporating the solvent slowly at room temperature for about 5 days.
The NH H-atom was located in a difference electron-density map and was freely refined. The C-bound H-atoms were included in calculated positions and treated as riding atoms: C-H = 0.93, 0.97 and 0.96 Å for CH, CH2 and CH3 H-atoms, respectively, with Uiso(H) = k × Ueq(parent C-atom), where k = 1.5 for CH3 H-atoms and = 1.2 for other H-atoms.
The title compound is used as an important intermediate to synthesis fluorescent tracers, for example, it has been recognized as an effective protein tracer (Belluti et al., 2010). Herein we report on the
of the title compound, which is illustrated in Fig. 1.The coumarin ring system is almost planar with a dihedral angle involving rings (O2,C1-C5) and (C4-C9) of only 1.40 (2) °. This is normal for such coumarin compounds (Kruszynski et al., 2005). The bromine atoms are involved in short Br···H interactions (Table 1).
In the crystal, the molecules stack along the a axis direction (Fig. 2). There are a number of π–π interactions present: Cg1···Cg1i 3.7580 (19) Å; Cg2···Cg1i 3.6484(19 Å; Cg2···Cg2ii 3.7942 (19) Å [where Cg1 is the centroid of ring (O2,C1-C5); Cg2 is the centroid of ring (C4-C9); symmetry codes: (i) -x+1, -y+1, -z+1; (ii) -x+2, -y+1, -z+1].
For the synthesis of the title compound, see: Belluti et al. (2010). For geometrical details of a coumarin compound, see: Kruszynski et al. (2005).
Data collection: CAD-4 Software (Enraf–Nonius, 1985); cell
CAD-4 Software (Enraf–Nonius, 1985); data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C12H11Br2NO2 | Z = 2 |
Mr = 361.04 | F(000) = 352 |
Triclinic, P1 | Dx = 1.903 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.5795 (9) Å | Cell parameters from 1771 reflections |
b = 7.6839 (9) Å | θ = 2.7–26.5° |
c = 11.2610 (14) Å | µ = 6.42 mm−1 |
α = 93.628 (2)° | T = 293 K |
β = 98.288 (3)° | Block, colourless |
γ = 102.626 (3)° | 0.20 × 0.18 × 0.15 mm |
V = 630.24 (13) Å3 |
Enraf–Nonius CAD-4 diffractometer | 1928 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.023 |
Graphite monochromator | θmax = 25.5°, θmin = 1.8° |
ω/2θ scans | h = −9→8 |
Absorption correction: ψ scan (North et al., 1968) | k = −8→9 |
Tmin = 0.360, Tmax = 0.446 | l = −11→13 |
3658 measured reflections | 3 standard reflections every 200 reflections |
2314 independent reflections | intensity decay: 1% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.097 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | w = 1/[σ2(Fo2) + (0.0633P)2 + 0.0665P] where P = (Fo2 + 2Fc2)/3 |
2314 reflections | (Δ/σ)max = 0.001 |
160 parameters | Δρmax = 0.51 e Å−3 |
1 restraint | Δρmin = −0.42 e Å−3 |
C12H11Br2NO2 | γ = 102.626 (3)° |
Mr = 361.04 | V = 630.24 (13) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.5795 (9) Å | Mo Kα radiation |
b = 7.6839 (9) Å | µ = 6.42 mm−1 |
c = 11.2610 (14) Å | T = 293 K |
α = 93.628 (2)° | 0.20 × 0.18 × 0.15 mm |
β = 98.288 (3)° |
Enraf–Nonius CAD-4 diffractometer | 1928 reflections with I > 2σ(I) |
Absorption correction: ψ scan (North et al., 1968) | Rint = 0.023 |
Tmin = 0.360, Tmax = 0.446 | 3 standard reflections every 200 reflections |
3658 measured reflections | intensity decay: 1% |
2314 independent reflections |
R[F2 > 2σ(F2)] = 0.031 | 1 restraint |
wR(F2) = 0.097 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | Δρmax = 0.51 e Å−3 |
2314 reflections | Δρmin = −0.42 e Å−3 |
160 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.93608 (5) | 0.72412 (5) | 0.21480 (3) | 0.05088 (16) | |
Br2 | 0.64459 (6) | 0.54212 (6) | 0.87739 (3) | 0.05501 (16) | |
O1 | 0.5330 (4) | 0.1746 (4) | 0.7375 (2) | 0.0561 (7) | |
O2 | 0.6172 (3) | 0.2336 (3) | 0.5627 (2) | 0.0410 (6) | |
N1 | 0.7998 (4) | 0.3167 (4) | 0.1806 (3) | 0.0403 (7) | |
C1 | 0.6005 (5) | 0.2886 (5) | 0.6787 (3) | 0.0414 (8) | |
C2 | 0.6637 (5) | 0.4800 (5) | 0.7146 (3) | 0.0388 (7) | |
C3 | 0.7310 (4) | 0.6008 (4) | 0.6420 (3) | 0.0358 (7) | |
C4 | 0.7489 (4) | 0.5355 (4) | 0.5224 (3) | 0.0335 (7) | |
C5 | 0.6917 (4) | 0.3514 (4) | 0.4864 (3) | 0.0334 (7) | |
C6 | 0.7056 (4) | 0.2766 (4) | 0.3743 (3) | 0.0352 (7) | |
H6 | 0.6655 | 0.1534 | 0.3547 | 0.042* | |
C7 | 0.7792 (4) | 0.3845 (4) | 0.2908 (3) | 0.0331 (7) | |
C8 | 0.8355 (4) | 0.5712 (4) | 0.3261 (3) | 0.0355 (7) | |
C9 | 0.8197 (4) | 0.6442 (4) | 0.4371 (3) | 0.0358 (7) | |
H9 | 0.8565 | 0.7677 | 0.4561 | 0.043* | |
C10 | 0.7902 (5) | 0.7994 (5) | 0.6800 (3) | 0.0480 (9) | |
H10A | 0.7510 | 0.8247 | 0.7552 | 0.072* | |
H10B | 0.7361 | 0.8632 | 0.6195 | 0.072* | |
H10C | 0.9213 | 0.8366 | 0.6894 | 0.072* | |
C11 | 0.7252 (5) | 0.1281 (5) | 0.1345 (3) | 0.0442 (8) | |
H11A | 0.5925 | 0.1010 | 0.1252 | 0.053* | |
H11B | 0.7695 | 0.0515 | 0.1913 | 0.053* | |
C12 | 0.7831 (6) | 0.0925 (6) | 0.0148 (4) | 0.0589 (10) | |
H12A | 0.9142 | 0.1137 | 0.0251 | 0.088* | |
H12B | 0.7420 | 0.1709 | −0.0405 | 0.088* | |
H12C | 0.7300 | −0.0298 | −0.0166 | 0.088* | |
H1 | 0.848 (4) | 0.380 (4) | 0.128 (2) | 0.036 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0641 (3) | 0.0348 (2) | 0.0574 (3) | 0.00657 (16) | 0.02514 (19) | 0.01385 (16) |
Br2 | 0.0732 (3) | 0.0580 (3) | 0.0363 (2) | 0.0195 (2) | 0.01301 (18) | −0.00175 (17) |
O1 | 0.0735 (18) | 0.0491 (16) | 0.0446 (15) | 0.0014 (13) | 0.0231 (13) | 0.0100 (12) |
O2 | 0.0551 (14) | 0.0292 (11) | 0.0361 (13) | 0.0006 (10) | 0.0133 (11) | 0.0011 (9) |
N1 | 0.0510 (17) | 0.0316 (14) | 0.0416 (16) | 0.0079 (12) | 0.0197 (14) | 0.0049 (12) |
C1 | 0.0445 (18) | 0.0410 (19) | 0.0381 (19) | 0.0082 (15) | 0.0064 (15) | 0.0061 (15) |
C2 | 0.0437 (18) | 0.0423 (18) | 0.0297 (17) | 0.0106 (14) | 0.0041 (14) | −0.0011 (14) |
C3 | 0.0338 (16) | 0.0327 (16) | 0.0396 (18) | 0.0092 (13) | 0.0017 (14) | −0.0031 (13) |
C4 | 0.0334 (15) | 0.0308 (16) | 0.0348 (17) | 0.0063 (12) | 0.0039 (13) | 0.0004 (13) |
C5 | 0.0351 (16) | 0.0281 (15) | 0.0368 (17) | 0.0067 (12) | 0.0048 (13) | 0.0057 (13) |
C6 | 0.0406 (17) | 0.0258 (15) | 0.0386 (18) | 0.0070 (12) | 0.0067 (14) | 0.0013 (13) |
C7 | 0.0320 (15) | 0.0285 (15) | 0.0394 (18) | 0.0078 (12) | 0.0072 (13) | 0.0014 (13) |
C8 | 0.0366 (16) | 0.0303 (16) | 0.0389 (18) | 0.0045 (12) | 0.0067 (14) | 0.0089 (13) |
C9 | 0.0365 (16) | 0.0230 (14) | 0.0457 (19) | 0.0050 (12) | 0.0028 (14) | 0.0016 (13) |
C10 | 0.056 (2) | 0.0335 (18) | 0.050 (2) | 0.0035 (16) | 0.0098 (17) | −0.0084 (16) |
C11 | 0.051 (2) | 0.0350 (18) | 0.045 (2) | 0.0058 (15) | 0.0098 (16) | −0.0020 (15) |
C12 | 0.077 (3) | 0.052 (2) | 0.047 (2) | 0.013 (2) | 0.015 (2) | −0.0055 (18) |
Br1—C8 | 1.899 (3) | C6—C7 | 1.390 (5) |
Br2—C2 | 1.899 (3) | C6—H6 | 0.9300 |
O1—C1 | 1.200 (4) | C7—C8 | 1.418 (4) |
O2—C5 | 1.375 (4) | C8—C9 | 1.369 (5) |
O2—C1 | 1.379 (4) | C9—H9 | 0.9300 |
N1—C7 | 1.358 (4) | C10—H10A | 0.9600 |
N1—C11 | 1.467 (4) | C10—H10B | 0.9600 |
N1—H1 | 0.857 (5) | C10—H10C | 0.9600 |
C1—C2 | 1.455 (5) | C11—C12 | 1.503 (5) |
C2—C3 | 1.342 (5) | C11—H11A | 0.9700 |
C3—C4 | 1.443 (5) | C11—H11B | 0.9700 |
C3—C10 | 1.508 (4) | C12—H12A | 0.9600 |
C4—C9 | 1.401 (5) | C12—H12B | 0.9600 |
C4—C5 | 1.401 (4) | C12—H12C | 0.9600 |
C5—C6 | 1.381 (5) | ||
C5—O2—C1 | 122.3 (3) | C9—C8—C7 | 122.4 (3) |
C7—N1—C11 | 122.7 (3) | C9—C8—Br1 | 119.2 (2) |
C7—N1—H1 | 124 (2) | C7—C8—Br1 | 118.4 (2) |
C11—N1—H1 | 113 (2) | C8—C9—C4 | 120.9 (3) |
O1—C1—O2 | 116.8 (3) | C8—C9—H9 | 119.5 |
O1—C1—C2 | 127.6 (3) | C4—C9—H9 | 119.5 |
O2—C1—C2 | 115.7 (3) | C3—C10—H10A | 109.5 |
C3—C2—C1 | 124.2 (3) | C3—C10—H10B | 109.5 |
C3—C2—Br2 | 123.0 (3) | H10A—C10—H10B | 109.5 |
C1—C2—Br2 | 112.8 (2) | C3—C10—H10C | 109.5 |
C2—C3—C4 | 117.8 (3) | H10A—C10—H10C | 109.5 |
C2—C3—C10 | 123.2 (3) | H10B—C10—H10C | 109.5 |
C4—C3—C10 | 119.0 (3) | N1—C11—C12 | 109.7 (3) |
C9—C4—C5 | 116.4 (3) | N1—C11—H11A | 109.7 |
C9—C4—C3 | 124.5 (3) | C12—C11—H11A | 109.7 |
C5—C4—C3 | 119.0 (3) | N1—C11—H11B | 109.7 |
O2—C5—C6 | 115.9 (3) | C12—C11—H11B | 109.7 |
O2—C5—C4 | 121.0 (3) | H11A—C11—H11B | 108.2 |
C6—C5—C4 | 123.1 (3) | C11—C12—H12A | 109.5 |
C5—C6—C7 | 120.3 (3) | C11—C12—H12B | 109.5 |
C5—C6—H6 | 119.9 | H12A—C12—H12B | 109.5 |
C7—C6—H6 | 119.9 | C11—C12—H12C | 109.5 |
N1—C7—C6 | 122.4 (3) | H12A—C12—H12C | 109.5 |
N1—C7—C8 | 120.7 (3) | H12B—C12—H12C | 109.5 |
C6—C7—C8 | 116.9 (3) | ||
C5—O2—C1—O1 | 179.8 (3) | C9—C4—C5—C6 | 1.1 (5) |
C5—O2—C1—C2 | 1.1 (4) | C3—C4—C5—C6 | −179.2 (3) |
O1—C1—C2—C3 | −177.1 (4) | O2—C5—C6—C7 | −179.9 (3) |
O2—C1—C2—C3 | 1.5 (5) | C4—C5—C6—C7 | 0.1 (5) |
O1—C1—C2—Br2 | 3.8 (5) | C11—N1—C7—C6 | 8.0 (5) |
O2—C1—C2—Br2 | −177.6 (2) | C11—N1—C7—C8 | −172.8 (3) |
C1—C2—C3—C4 | −2.8 (5) | C5—C6—C7—N1 | 178.4 (3) |
Br2—C2—C3—C4 | 176.3 (2) | C5—C6—C7—C8 | −0.8 (5) |
C1—C2—C3—C10 | 178.0 (3) | N1—C7—C8—C9 | −178.9 (3) |
Br2—C2—C3—C10 | −3.0 (5) | C6—C7—C8—C9 | 0.2 (5) |
C2—C3—C4—C9 | −178.8 (3) | N1—C7—C8—Br1 | 1.1 (4) |
C10—C3—C4—C9 | 0.5 (5) | C6—C7—C8—Br1 | −179.8 (2) |
C2—C3—C4—C5 | 1.6 (5) | C7—C8—C9—C4 | 1.0 (5) |
C10—C3—C4—C5 | −179.2 (3) | Br1—C8—C9—C4 | −179.0 (2) |
C1—O2—C5—C6 | 177.8 (3) | C5—C4—C9—C8 | −1.7 (5) |
C1—O2—C5—C4 | −2.2 (5) | C3—C4—C9—C8 | 178.7 (3) |
C9—C4—C5—O2 | −178.8 (3) | C7—N1—C11—C12 | −175.8 (3) |
C3—C4—C5—O2 | 0.8 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···Br1 | 0.86 (3) | 2.67 (3) | 3.055 (3) | 109 (2) |
C10—H10A···Br2 | 0.96 | 2.68 | 3.221 (4) | 116 |
Experimental details
Crystal data | |
Chemical formula | C12H11Br2NO2 |
Mr | 361.04 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 7.5795 (9), 7.6839 (9), 11.2610 (14) |
α, β, γ (°) | 93.628 (2), 98.288 (3), 102.626 (3) |
V (Å3) | 630.24 (13) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 6.42 |
Crystal size (mm) | 0.20 × 0.18 × 0.15 |
Data collection | |
Diffractometer | Enraf–Nonius CAD-4 |
Absorption correction | ψ scan (North et al., 1968) |
Tmin, Tmax | 0.360, 0.446 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3658, 2314, 1928 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.031, 0.097, 1.00 |
No. of reflections | 2314 |
No. of parameters | 160 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.51, −0.42 |
Computer programs: CAD-4 Software (Enraf–Nonius, 1985), XCAD4 (Harms & Wocadlo, 1995), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···Br1 | 0.86 (3) | 2.67 (3) | 3.055 (3) | 109 (2) |
C10—H10A···Br2 | 0.96 | 2.68 | 3.221 (4) | 116 |
Acknowledgements
The authors thank the Center of Testing and Analysis, Nanjing University, for the data collection.
References
Belluti, F., Fontana, G., Bo, L. D. & Carenini, N. (2010). Bioorg. Med. Chem. 18, 3543–3550. Web of Science CrossRef CAS PubMed Google Scholar
Enraf–Nonius (1985). CAD-4 Software. Enraf–Nonius, Delft, The Netherlands. Google Scholar
Harms, K. & Wocadlo, S. (1995). XCAD4. University of Marburg, Germany. Google Scholar
Kruszynski, R., Trzesowska, A., Majewski, P., Skretowska, S. & Marszalek, A. (2005). Acta Cryst. E61, o1248–o1250. Web of Science CSD CrossRef IUCr Journals Google Scholar
North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359. CrossRef IUCr Journals Web of Science Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The title compound is used as an important intermediate to synthesis fluorescent tracers, for example, it has been recognized as an effective protein tracer (Belluti et al., 2010). Herein we report on the crystal structure of the title compound, which is illustrated in Fig. 1.
The coumarin ring system is almost planar with a dihedral angle involving rings (O2,C1-C5) and (C4-C9) of only 1.40 (2) °. This is normal for such coumarin compounds (Kruszynski et al., 2005). The bromine atoms are involved in short Br···H interactions (Table 1).
In the crystal, the molecules stack along the a axis direction (Fig. 2). There are a number of π–π interactions present: Cg1···Cg1i 3.7580 (19) Å; Cg2···Cg1i 3.6484(19 Å; Cg2···Cg2ii 3.7942 (19) Å [where Cg1 is the centroid of ring (O2,C1-C5); Cg2 is the centroid of ring (C4-C9); symmetry codes: (i) -x+1, -y+1, -z+1; (ii) -x+2, -y+1, -z+1].