metal-organic compounds
Poly[[diaquabis[μ4-5-nitroisophthalato-κ4O1:O1:O3:O3′]bis[μ3-pyridine-4-carboxylato-κ3O:O′:N]tricobalt(II)] tetrahydrate]
aSchool of Chemistry and Environment, South China Normal University, Guangzhou 510006, People's Republic of China
*Correspondence e-mail: fanj@scnu.edu.cn
The title compound, {[Co3(C6H4NO2)2(C8H3NO6)2(H2O)2]·4H2O}n, exhibits a two-dimensional layer-like structure in which the CoII ions exhibit two kinds of coordination geometries. One nearly octahedral CoII ion with crystallographic inversion symmetry is coordinated to six carboxylate O atoms from four bridging 5-nitroisophthalate (NIPH) ligands and two isonicotinate (IN) anions, while the other type of CoII ion binds with one N atom and one carboxylate O atom from two IN anions, two carboxylate O atoms from two different NIPH anions and one ligated water molecule, displaying a distorted square-pyramidal coordination geometry. Three adjacent CoII ions are bridged by six carboxylate groups from four NIPH ligands and two IN anions to form a linear trinuclear secondary building unit (SBU). Every trinuclear SBU is linked to its nearest neighbours in the ab plane, resulting in a two-dimensional layer-like structure perpendicular to the c axis. Along the a-axis direction neighbouring molecules are connected through carboxylate and pyridyl units of the IN anions, along the b axis through carboxylate groups of the NIPH ligands. The H atoms of one free water molecule are disordered in the crystal in a 1:1 ratio. Typical O—H⋯O hydrogen bonds are observed in the lattice, which include the following contacts: (a) between coordinated water molecules and carboxylate O atoms of the NIPH anions, (b) between lattice water molecules and carboxylate O atoms of the NIPH anions, and (c) between coordinated and lattice water molecules. These intermolecular hydrogen bonds connect the two-dimensional layers to form a three-dimensional supramolecular structure.
Related literature
For general background to the design and synthesis of coordination polymers, see: Jiang et al. (2010); Ma et al. (2009); Natarajan & Mahata (2009); Zang et al. (2006). For complexes with isonicotinate, see: Amo-Ochoa et al. (2010). For complexes with 5-nitroisophthalate, see: Chen et al. (2006, 2010); Sun et al. (2010). For related compounds, see: Du et al. (2008); Luo et al. (2003); Wang et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell APEX2; data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812011269/zl2461sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812011269/zl2461Isup2.hkl
A mixture of Co(CH3COO)2.4 H2O (0.1245 g, 0.50 mmol), 5-nitroisophthalic acid (0.0503 g, 0.25 mmol) and isonicotinic acid (0.0310 g, 0.25 mmol) in 8 ml H2O were sealed in a 15 ml Teflon-lined stainless steel reactor and kept under autogenous pressure at 393 K for three days. After the sample was cooled to room temperature at a rate of 5 K/h, pink block-shaped crystals of the title compound were collected and washed with ethanol and water (yield, 45%). IR (KBr pellet, ν, cm-1): 3412 (br), 3102 (s), 1607 (s), 1587 (s), 1541 (s), 1461 (m), 1420 (m), 1403 (s), 1360 (m), 1342 (m), 1163 (w), 1088 (m), 1065 (m), 1024 (m), 933 (m), 921 (w), 862 (m), 792 (m), 781 (m), 724 (m), 714 (s), 691 (m), 592 (w), 562 (w).
The disordered hydrogen atoms (H3W and H4W) of lattice water molecule O2W are, due to a close contact of O2W with one of its symmetry equivalent counterparts across an inversion center, disordered in a 1:1 mode in the crystal. In one of the alternative orientations O2W is hydrogen bonding via H3WB to O2Wii and via H4WB to both O2v and O5vi. In the other orientation, with O2W acting as the acceptor of a hydrogen bond from O2Wii, the water molecule hydrogen bonds via H3WA and H3WB to O6vi and O2v (see Table 1 for symmetry operators). All hydrogen atoms of water molecules were located in electron difference density Fourier maps. The disordered hydrogen atoms (H3W and H4W) of lattice water molecule O2W were refined in a 1:1 disordered mode with O—H distance restraints of 0.85 (2) Å, and H···H distance restraints of 1.37 (2) Å. The other hydrogen atoms were placed geometrically and refined as riding atoms [C—H = 0.93 Å (aromatic C—H), O–H = 0.83 Å (coordinated H2O) and 0.85 Å (lattice water molecules)]. All H atoms were refined with isotropic thermal factors Uiso (H) = 1.2 Ueq (C), or Uiso (H) = 1.5 Ueq(O)].
Over the past decades, rational design and construction of metal coordination polymers with aromatic carboxylates have become an attractive area in coordination and supramolecular chemistry, due to the fascinating network topologies they exhibit (Natarajan & Mahata, 2009) and due to industrially focused applications in gas storage, adsorption and separation (Ma et al., 2009), nonlinear optical devices (Zang et al., 2006), and fluorescence (Jiang et al., 2010), etc. Due to versatile coordination modes and easy formation of secondary building units, 5-nitroisophthalate (NIPH) has been widely employed to construct coordination polymers (Chen et al., 2010; Du et al., 2008; Sun et al., 2010).
Most cobalt complexes with 5-nitroisophthalate (NIPH) and aromatic N-donor coligands (pyridine, bipyridine, and imidazole) possess low-dimensional structure characteristics, namely, ladder, loop-like chain, zigzag chain, layer, and grid, etc (Chen et al., 2006; Du et al., 2008; Luo et al., 2003). Cobalt complexes based on NIPH ligand and other carboxylates have been less developed (Wang et al., 2009). In this work, we selected isonicotinic acid (HIN) as the coligand based on the following considerations: (1) it possesses the bifunctional bridging groups with both oxygen and nitrogen donors as a potential linkers and (2) it can adopt various coordination modes in high-dimensional heterometallic frameworks (Amo-Ochoa et al., 2010). Herein, synthesis and
of a new cobalt compound is presented, which was prepared by hydrothermal reaction of Co(CH3COO)2.4 H2O with 5-nitroisophthalic acid and isonicotinic acid.The title compound exhibits a two-dimensional layer-like framework. As illustrated in Fig.1, each
contains one and a half CoII ions, one 5-nitroisophthalate (NIPH) anion, an isonicotinate (IN) anion, one ligated and two lattice water molecules, as the Co1II ion lies on a crystallographic inversion centre. In the structure, the Co1II ion is six-coordinated in an O6 donor set with the coordination geometry of a slightly distorted octahedron by four carboxylate oxygen atoms [O1, O1i, O4ii, O4iii, symmetry codes: (i) -x, 1 - y, 1 - z; (ii) x, -1 + y, z; (iii) -x, 2 - y, 1 - z] from four bridging NIPH ligands in the equatorial plane, and the others [O8 and O8i, symmetry code: (i) -x, 1 - y, 1 - z] from two IN anions at the axial sites; the Co2II ion coordinates with one N2iv atom [symmetry code: (iv) -1 + x, y, z] and one carboxylate O7 atom from two IN anions, two carboxylate oxygen atoms [O3ii and O7, symmetry code: (ii) x, -1 + y, z] from two different NIPH anions and one ligated water molecules, displaying a distorted square pyramidal coordination geometry. If the weak Co—O interaction between Co2 and O2 (2.4908 (6) Å) was considered, the coordination configuration of the Co2 ion could also be described as a severely distorted octahedron. The Co—O bond distances are in the range of 2.0206 (18)–2.1624 (16) Å, and the Co—N bond length is equal to 2.1465 (19) Å, all of which are in the normal ranges (Du et al., 2008).The NIPH ligand acts as µ4-bridge to link four different CoII ions through two carboxylate groups and the IN anion adopts a tridentate-bridging mode to connect three CoII ions. Thus, one Co1II and two Co2II ions are bridged by six carboxylate groups from four NIPH ligands (two carboxylate groups in bis-monodentate mode and two in monodentate bridged mode) and two IN anions (the carboxylate groups in bis-monodentate mode) to form a linear trinuclear secondary building unit (SBU), [Co3(NIPH)2(IN)2(H2O)2] with a Co···Co separation of 3.5086 (10) Å. Every trinuclear SBU is in turn linked to its nearest neighbors in the ab plane, resulting in a two-dimensional layer like structure perpendicular to the c-axis (Fig. 2). Along the a-axis direction neighboring molecules are connected through carboxylate and pyridyl units of the IN anions, along the b-axis through carboxylate groups of the NIPH ligands. Topologically, the trinuclear CoII units can be seen as four-connected nodes and the organic ligands (the NIPH and IN anions) act as two-connected rods. On the basis of this simplification, this two-dimensional structure can be described as a (4,4)-topological network.
There are multiple O–H···O hydrogen bonds in the complex, which include the following types of contacts: (a) between coordinated water molecule and carboxylate oxygen atoms of the NIPH anions [O···O, 2.820 (3) Å], (b) between lattice water molecule and carboxylate oxygen atoms of the NIPH anions [O···O, 2.861 (3) – 3.098 (4) Å] and (c) between coordinated and lattice water molecules [O···O, 2.648 (3) – 3.297 (6) Å]. Thus, these two-dimensional layers are further extended to a three-dimensional supramolecular network (Fig. 3).
The IR spectrum shows characteristic absorptions for the carboxylate stretching vibrations and the coordination of organic carboxylate anions (NIPH and IN) to CoII was confirmed by the absence of υ(COOH) absorption bands of the organic ligands at around 1700 cm-1. The characteristic vibrations of the carboxylate groups are seen in the range 1607–1541 cm-1 for asymmetric stretching and 1461–1360 cm-1 for symmetric stretching. The broad absorption band observed at 3412 cm-1 can be assigned to the O–H stretching vibration, indicating the presence of water molecules.
In summary, a new (4, 4)–two-dimensional layer-like polynuclear CoII coordination polymer was constructed by hydrothermal reaction between Co(II) ions and mixed carboxylate ligands, which is further extended to a three-dimensional supramolecular network through intermolecular hydrogen bonding.
For general background to the design and synthesis of coordination polymers, see: Jiang et al. (2010); Ma et al. (2009); Natarajan & Mahata (2009); Zang et al. (2006). For complexes with isonicotinate, see: Amo-Ochoa et al. (2010). For complexes with 5-nitroisophthalate, see: Chen et al. (2006, 2010); Sun et al. (2010). For related compounds, see: Du et al. (2008); Luo et al. (2003); Wang et al. (2009).
Data collection: APEX2 (Bruker, 2007); cell
APEX2 (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title compound, with displacement ellipsoids drawn at the 30% probability level. All H atoms are drawn as spheres of arbitrary radii. [Symmetry codes: (i): -x, -y + 1, -z + 1; (ii): x - 1, y, z; (iii): -x + 1, -y + 1, -z + 1; (iv): x, y - 1, z; (v): -x, -y + 2, -z - 1]. Disorder of H atoms of O2W is omitted for clarity. | |
Fig. 2. (a) A packing diagram along the a-axial direction. (b) A packing diagram, showing the two-dimensional layer-like structure in the ab plane. H atoms are omitted for clarity. | |
Fig. 3. A packing diagram of the title compound, showing the three-dimensional supramolecular network driven by intermolecular hydrogen bonds (dashed lines). H atoms are omitted for clarity. |
[Co3(C6H4NO2)2(C8H3NO6)2(H2O)2]·4H2O | Z = 1 |
Mr = 947.32 | F(000) = 479 |
Triclinic, P1 | Dx = 1.872 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.1890 (18) Å | Cell parameters from 3665 reflections |
b = 9.3548 (19) Å | θ = 2.0–27.9° |
c = 10.390 (2) Å | µ = 1.57 mm−1 |
α = 78.74 (3)° | T = 298 K |
β = 88.64 (3)° | Block, pink |
γ = 73.68 (3)° | 0.35 × 0.28 × 0.16 mm |
V = 840.2 (3) Å3 |
Bruker SMART APEXII CCD area-detector diffractometer | 2976 independent reflections |
Radiation source: fine-focus sealed tube | 2667 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.012 |
φ and ω scan | θmax = 25.3°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | h = −9→11 |
Tmin = 0.610, Tmax = 0.788 | k = −11→11 |
4357 measured reflections | l = −12→12 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.071 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0397P)2 + 0.585P] where P = (Fo2 + 2Fc2)/3 |
2976 reflections | (Δ/σ)max = 0.001 |
271 parameters | Δρmax = 0.40 e Å−3 |
10 restraints | Δρmin = −0.40 e Å−3 |
[Co3(C6H4NO2)2(C8H3NO6)2(H2O)2]·4H2O | γ = 73.68 (3)° |
Mr = 947.32 | V = 840.2 (3) Å3 |
Triclinic, P1 | Z = 1 |
a = 9.1890 (18) Å | Mo Kα radiation |
b = 9.3548 (19) Å | µ = 1.57 mm−1 |
c = 10.390 (2) Å | T = 298 K |
α = 78.74 (3)° | 0.35 × 0.28 × 0.16 mm |
β = 88.64 (3)° |
Bruker SMART APEXII CCD area-detector diffractometer | 2976 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | 2667 reflections with I > 2σ(I) |
Tmin = 0.610, Tmax = 0.788 | Rint = 0.012 |
4357 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | 10 restraints |
wR(F2) = 0.071 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.40 e Å−3 |
2976 reflections | Δρmin = −0.40 e Å−3 |
271 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | −0.1582 (2) | 0.6886 (2) | 0.7129 (2) | 0.0192 (5) | |
C2 | −0.1920 (3) | 0.8433 (2) | 0.6267 (2) | 0.0193 (5) | |
C3 | −0.2761 (3) | 0.8738 (2) | 0.5103 (2) | 0.0215 (5) | |
H3 | −0.3109 | 0.7991 | 0.4846 | 0.026* | |
C4 | −0.3067 (3) | 1.0182 (3) | 0.4336 (2) | 0.0226 (5) | |
C5 | −0.2494 (3) | 1.1290 (3) | 0.4646 (2) | 0.0241 (5) | |
H5 | −0.2671 | 1.2232 | 0.4086 | 0.029* | |
C6 | −0.1647 (3) | 1.0974 (2) | 0.5811 (2) | 0.0194 (5) | |
C7 | −0.1408 (3) | 0.9561 (2) | 0.6638 (2) | 0.0212 (5) | |
H7 | −0.0902 | 0.9370 | 0.7445 | 0.025* | |
C9 | 0.2058 (2) | 0.3927 (2) | 0.7504 (2) | 0.0201 (5) | |
C10 | 0.3646 (2) | 0.3974 (2) | 0.7775 (2) | 0.0201 (5) | |
C11 | 0.4307 (3) | 0.3616 (3) | 0.9022 (2) | 0.0302 (6) | |
H11 | 0.3769 | 0.3339 | 0.9753 | 0.036* | |
C12 | 0.5780 (3) | 0.3674 (3) | 0.9166 (2) | 0.0291 (5) | |
H12 | 0.6227 | 0.3388 | 1.0005 | 0.035* | |
C13 | 0.5920 (3) | 0.4501 (3) | 0.6972 (2) | 0.0320 (6) | |
H13 | 0.6454 | 0.4836 | 0.6259 | 0.038* | |
C14 | 0.4490 (3) | 0.4422 (3) | 0.6743 (2) | 0.0313 (6) | |
H14 | 0.4085 | 0.4672 | 0.5889 | 0.038* | |
C8 | −0.1022 (2) | 1.2189 (2) | 0.6151 (2) | 0.0202 (5) | |
Co1 | 0.0000 | 0.5000 | 0.5000 | 0.01527 (11) | |
Co2 | −0.10352 (3) | 0.39808 (3) | 0.82492 (3) | 0.01738 (10) | |
N2 | 0.6596 (2) | 0.4120 (2) | 0.81683 (18) | 0.0218 (4) | |
N1 | −0.4063 (2) | 1.0548 (2) | 0.3153 (2) | 0.0297 (5) | |
O2 | −0.1492 (2) | 0.67118 (19) | 0.83422 (16) | 0.0285 (4) | |
O1 | −0.14157 (17) | 0.57462 (16) | 0.65704 (15) | 0.0192 (3) | |
O6 | −0.4433 (3) | 0.9517 (2) | 0.2817 (2) | 0.0474 (5) | |
O5 | −0.4506 (3) | 1.1871 (2) | 0.2580 (2) | 0.0484 (5) | |
O7 | 0.11919 (18) | 0.3888 (2) | 0.84536 (16) | 0.0285 (4) | |
O3 | −0.07060 (19) | 1.21068 (17) | 0.73447 (16) | 0.0247 (4) | |
O4 | −0.08995 (18) | 1.31976 (17) | 0.52098 (16) | 0.0250 (4) | |
O8 | 0.17412 (17) | 0.39430 (18) | 0.63366 (15) | 0.0231 (3) | |
O1W | 0.8479 (2) | 0.0405 (2) | 0.1145 (2) | 0.0498 (5) | |
H1W | 0.9262 | −0.0299 | 0.1429 | 0.075* | |
H2W | 0.8017 | 0.0109 | 0.0599 | 0.075* | |
O3W | −0.0897 (2) | 0.2994 (2) | 1.01711 (16) | 0.0356 (4) | |
H5W | −0.0190 | 0.3181 | 1.0515 | 0.053* | |
H6W | −0.1021 | 0.2183 | 1.0577 | 0.053* | |
O2W | 0.3255 (3) | 0.0491 (3) | 0.0522 (3) | 0.0676 (7) | |
H4WA | 0.271 (8) | 0.114 (6) | 0.094 (7) | 0.101* | 0.50 |
H3WA | 0.386 (8) | −0.021 (7) | 0.103 (6) | 0.101* | 0.50 |
H3WB | 0.415 (3) | −0.006 (6) | 0.038 (6) | 0.101* | 0.50 |
H4WB | 0.344 (5) | 0.096 (5) | 0.114 (5) | 0.101* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0180 (11) | 0.0210 (11) | 0.0200 (12) | −0.0090 (9) | −0.0018 (9) | −0.0017 (9) |
C2 | 0.0203 (11) | 0.0170 (11) | 0.0211 (12) | −0.0057 (9) | 0.0012 (9) | −0.0046 (9) |
C3 | 0.0245 (12) | 0.0198 (11) | 0.0226 (12) | −0.0085 (9) | 0.0000 (9) | −0.0067 (9) |
C4 | 0.0246 (12) | 0.0229 (12) | 0.0205 (12) | −0.0059 (9) | −0.0043 (9) | −0.0050 (9) |
C5 | 0.0285 (13) | 0.0181 (11) | 0.0244 (13) | −0.0068 (9) | 0.0002 (10) | −0.0009 (9) |
C6 | 0.0226 (11) | 0.0168 (10) | 0.0212 (11) | −0.0087 (9) | 0.0018 (9) | −0.0049 (9) |
C7 | 0.0244 (12) | 0.0227 (11) | 0.0185 (11) | −0.0095 (9) | −0.0006 (9) | −0.0044 (9) |
C9 | 0.0164 (11) | 0.0186 (11) | 0.0247 (13) | −0.0058 (9) | −0.0022 (9) | −0.0012 (9) |
C10 | 0.0165 (11) | 0.0222 (11) | 0.0224 (12) | −0.0059 (9) | −0.0030 (9) | −0.0047 (9) |
C11 | 0.0256 (13) | 0.0474 (15) | 0.0193 (12) | −0.0183 (11) | −0.0009 (10) | 0.0010 (11) |
C12 | 0.0247 (13) | 0.0447 (15) | 0.0191 (12) | −0.0142 (11) | −0.0049 (10) | −0.0017 (11) |
C13 | 0.0258 (13) | 0.0518 (16) | 0.0201 (13) | −0.0196 (12) | 0.0000 (10) | 0.0016 (11) |
C14 | 0.0237 (13) | 0.0541 (17) | 0.0186 (13) | −0.0191 (12) | −0.0043 (10) | −0.0003 (11) |
C8 | 0.0164 (11) | 0.0173 (11) | 0.0274 (13) | −0.0048 (9) | −0.0008 (9) | −0.0053 (9) |
Co1 | 0.0164 (2) | 0.0163 (2) | 0.0144 (2) | −0.00812 (16) | −0.00199 (16) | −0.00068 (16) |
Co2 | 0.01635 (17) | 0.02053 (17) | 0.01603 (17) | −0.00834 (12) | −0.00217 (11) | −0.00047 (12) |
N2 | 0.0185 (10) | 0.0277 (10) | 0.0205 (10) | −0.0088 (8) | −0.0011 (8) | −0.0042 (8) |
N1 | 0.0334 (12) | 0.0289 (11) | 0.0256 (11) | −0.0078 (9) | −0.0075 (9) | −0.0031 (9) |
O2 | 0.0386 (10) | 0.0315 (9) | 0.0176 (9) | −0.0147 (8) | −0.0028 (7) | −0.0024 (7) |
O1 | 0.0226 (8) | 0.0158 (7) | 0.0209 (8) | −0.0086 (6) | 0.0011 (6) | −0.0028 (6) |
O6 | 0.0637 (14) | 0.0393 (11) | 0.0429 (12) | −0.0196 (10) | −0.0279 (10) | −0.0057 (9) |
O5 | 0.0636 (14) | 0.0314 (11) | 0.0423 (12) | −0.0081 (10) | −0.0262 (10) | 0.0072 (9) |
O7 | 0.0183 (8) | 0.0470 (10) | 0.0226 (9) | −0.0141 (7) | −0.0003 (7) | −0.0050 (8) |
O3 | 0.0308 (9) | 0.0209 (8) | 0.0242 (9) | −0.0095 (7) | −0.0051 (7) | −0.0048 (7) |
O4 | 0.0319 (9) | 0.0219 (8) | 0.0254 (9) | −0.0163 (7) | −0.0005 (7) | −0.0013 (7) |
O8 | 0.0211 (8) | 0.0282 (8) | 0.0200 (9) | −0.0062 (7) | −0.0051 (6) | −0.0051 (7) |
O1W | 0.0499 (13) | 0.0354 (11) | 0.0605 (14) | −0.0130 (10) | −0.0197 (11) | 0.0029 (10) |
O3W | 0.0370 (11) | 0.0510 (11) | 0.0227 (9) | −0.0284 (9) | −0.0097 (8) | 0.0079 (8) |
O2W | 0.0697 (18) | 0.0779 (19) | 0.0591 (16) | −0.0224 (14) | −0.0130 (14) | −0.0186 (14) |
C1—O2 | 1.241 (3) | C8—O4 | 1.246 (3) |
C1—O1 | 1.281 (3) | C8—O3 | 1.263 (3) |
C1—C2 | 1.499 (3) | Co1—O8 | 2.0363 (17) |
C2—C3 | 1.388 (3) | Co1—O8i | 2.0363 (17) |
C2—C7 | 1.389 (3) | Co1—O4ii | 2.0506 (15) |
C3—C4 | 1.384 (3) | Co1—O4iii | 2.0506 (15) |
C3—H3 | 0.9300 | Co1—O1 | 2.1623 (16) |
C4—C5 | 1.379 (3) | Co1—O1i | 2.1623 (16) |
C4—N1 | 1.477 (3) | Co2—O3W | 2.0205 (18) |
C5—C6 | 1.391 (3) | Co2—O7 | 2.0383 (16) |
C5—H5 | 0.9300 | Co2—O3ii | 2.0927 (16) |
C6—C7 | 1.391 (3) | Co2—O1 | 2.1146 (17) |
C6—C8 | 1.511 (3) | Co2—N2iv | 2.1468 (19) |
C7—H7 | 0.9300 | N2—Co2v | 2.1468 (19) |
C9—O8 | 1.250 (3) | N1—O6 | 1.220 (3) |
C9—O7 | 1.254 (3) | N1—O5 | 1.222 (3) |
C9—C10 | 1.507 (3) | O3—Co2vi | 2.0927 (16) |
C10—C14 | 1.376 (3) | O4—Co1vi | 2.0506 (15) |
C10—C11 | 1.384 (3) | O1W—H1W | 0.8406 |
C11—C12 | 1.383 (3) | O1W—H2W | 0.8463 |
C11—H11 | 0.9300 | O3W—H5W | 0.8243 |
C12—N2 | 1.334 (3) | O3W—H6W | 0.8285 |
C12—H12 | 0.9300 | O2W—H4WA | 0.854 (19) |
C13—N2 | 1.341 (3) | O2W—H3WA | 0.83 (2) |
C13—C14 | 1.366 (3) | O2W—H3WB | 0.868 (19) |
C13—H13 | 0.9300 | O2W—H4WB | 0.886 (18) |
C14—H14 | 0.9300 | ||
O2—C1—O1 | 120.9 (2) | O8—Co1—O4iii | 84.51 (7) |
O2—C1—C2 | 121.4 (2) | O8i—Co1—O4iii | 95.49 (7) |
O1—C1—C2 | 117.69 (19) | O4ii—Co1—O4iii | 180.0 |
C3—C2—C7 | 120.2 (2) | O8—Co1—O1 | 89.18 (6) |
C3—C2—C1 | 119.64 (19) | O8i—Co1—O1 | 90.82 (6) |
C7—C2—C1 | 120.2 (2) | O4ii—Co1—O1 | 87.91 (6) |
C4—C3—C2 | 118.2 (2) | O4iii—Co1—O1 | 92.09 (6) |
C4—C3—H3 | 120.9 | O8—Co1—O1i | 90.82 (6) |
C2—C3—H3 | 120.9 | O8i—Co1—O1i | 89.18 (6) |
C5—C4—C3 | 122.5 (2) | O4ii—Co1—O1i | 92.09 (6) |
C5—C4—N1 | 119.0 (2) | O4iii—Co1—O1i | 87.91 (6) |
C3—C4—N1 | 118.4 (2) | O1—Co1—O1i | 180.0 |
C4—C5—C6 | 118.8 (2) | O3W—Co2—O7 | 86.46 (7) |
C4—C5—H5 | 120.6 | O3W—Co2—O3ii | 101.78 (7) |
C6—C5—H5 | 120.6 | O7—Co2—O3ii | 97.35 (7) |
C5—C6—C7 | 119.6 (2) | O3W—Co2—O1 | 158.16 (7) |
C5—C6—C8 | 118.8 (2) | O7—Co2—O1 | 93.45 (7) |
C7—C6—C8 | 121.6 (2) | O3ii—Co2—O1 | 99.89 (6) |
C2—C7—C6 | 120.5 (2) | O3W—Co2—N2iv | 90.42 (8) |
C2—C7—H7 | 119.8 | O7—Co2—N2iv | 175.95 (7) |
C6—C7—H7 | 119.8 | O3ii—Co2—N2iv | 85.80 (7) |
O8—C9—O7 | 126.8 (2) | O1—Co2—N2iv | 88.50 (7) |
O8—C9—C10 | 115.7 (2) | C12—N2—C13 | 116.3 (2) |
O7—C9—C10 | 117.6 (2) | C12—N2—Co2v | 126.40 (16) |
C14—C10—C11 | 117.4 (2) | C13—N2—Co2v | 116.62 (15) |
C14—C10—C9 | 119.2 (2) | O6—N1—O5 | 123.4 (2) |
C11—C10—C9 | 123.4 (2) | O6—N1—C4 | 118.2 (2) |
C12—C11—C10 | 119.0 (2) | O5—N1—C4 | 118.4 (2) |
C12—C11—H11 | 120.5 | C1—O1—Co2 | 99.61 (13) |
C10—C11—H11 | 120.5 | C1—O1—Co1 | 132.30 (13) |
N2—C12—C11 | 123.7 (2) | Co2—O1—Co1 | 110.24 (7) |
N2—C12—H12 | 118.2 | C9—O7—Co2 | 122.97 (15) |
C11—C12—H12 | 118.2 | C8—O3—Co2vi | 124.57 (14) |
N2—C13—C14 | 123.5 (2) | C8—O4—Co1vi | 134.35 (15) |
N2—C13—H13 | 118.3 | C9—O8—Co1 | 138.09 (15) |
C14—C13—H13 | 118.3 | H1W—O1W—H2W | 108.3 |
C13—C14—C10 | 120.1 (2) | Co2—O3W—H5W | 107.7 |
C13—C14—H14 | 120.0 | Co2—O3W—H6W | 133.6 |
C10—C14—H14 | 120.0 | H5W—O3W—H6W | 109.9 |
O4—C8—O3 | 126.6 (2) | H4WA—O2W—H3WA | 111 (4) |
O4—C8—C6 | 115.6 (2) | H4WA—O2W—H3WB | 149 (7) |
O3—C8—C6 | 117.70 (19) | H3WA—O2W—H3WB | 51 (7) |
O8—Co1—O8i | 180.000 (1) | H4WA—O2W—H4WB | 46 (6) |
O8—Co1—O4ii | 95.49 (7) | H3WA—O2W—H4WB | 77 (6) |
O8i—Co1—O4ii | 84.51 (7) | H3WB—O2W—H4WB | 103 (3) |
O2—C1—C2—C3 | −146.5 (2) | C3—C4—N1—O5 | 169.9 (2) |
O1—C1—C2—C3 | 32.3 (3) | O2—C1—O1—Co2 | 0.1 (2) |
O2—C1—C2—C7 | 32.7 (3) | C2—C1—O1—Co2 | −178.70 (16) |
O1—C1—C2—C7 | −148.5 (2) | O2—C1—O1—Co1 | −128.83 (19) |
C7—C2—C3—C4 | 0.0 (3) | C2—C1—O1—Co1 | 52.4 (3) |
C1—C2—C3—C4 | 179.3 (2) | O3W—Co2—O1—C1 | 8.5 (2) |
C2—C3—C4—C5 | 4.0 (3) | O7—Co2—O1—C1 | −80.54 (13) |
C2—C3—C4—N1 | −175.2 (2) | O3ii—Co2—O1—C1 | −178.62 (13) |
C3—C4—C5—C6 | −3.7 (4) | N2iv—Co2—O1—C1 | 95.91 (13) |
N1—C4—C5—C6 | 175.4 (2) | O3W—Co2—O1—Co1 | 150.72 (15) |
C4—C5—C6—C7 | −0.5 (3) | O7—Co2—O1—Co1 | 61.64 (8) |
C4—C5—C6—C8 | −179.9 (2) | O3ii—Co2—O1—Co1 | −36.44 (8) |
C3—C2—C7—C6 | −4.1 (3) | N2iv—Co2—O1—Co1 | −121.91 (8) |
C1—C2—C7—C6 | 176.6 (2) | O8—Co1—O1—C1 | 84.14 (19) |
C5—C6—C7—C2 | 4.4 (3) | O8i—Co1—O1—C1 | −95.86 (19) |
C8—C6—C7—C2 | −176.2 (2) | O4ii—Co1—O1—C1 | 179.66 (19) |
O8—C9—C10—C14 | 16.8 (3) | O4iii—Co1—O1—C1 | −0.34 (19) |
O7—C9—C10—C14 | −162.7 (2) | O8—Co1—O1—Co2 | −41.04 (7) |
O8—C9—C10—C11 | −164.6 (2) | O8i—Co1—O1—Co2 | 138.96 (7) |
O7—C9—C10—C11 | 16.0 (3) | O4ii—Co1—O1—Co2 | 54.48 (8) |
C14—C10—C11—C12 | −2.2 (4) | O4iii—Co1—O1—Co2 | −125.52 (8) |
C9—C10—C11—C12 | 179.2 (2) | O8—C9—O7—Co2 | −4.1 (3) |
C10—C11—C12—N2 | 2.8 (4) | C10—C9—O7—Co2 | 175.29 (14) |
N2—C13—C14—C10 | 1.9 (4) | O3W—Co2—O7—C9 | 157.95 (19) |
C11—C10—C14—C13 | 0.0 (4) | O3ii—Co2—O7—C9 | 56.52 (18) |
C9—C10—C14—C13 | 178.7 (2) | O1—Co2—O7—C9 | −43.92 (18) |
C5—C6—C8—O4 | −21.3 (3) | O4—C8—O3—Co2vi | 35.3 (3) |
C7—C6—C8—O4 | 159.2 (2) | C6—C8—O3—Co2vi | −143.13 (16) |
C5—C6—C8—O3 | 157.3 (2) | O3—C8—O4—Co1vi | 7.4 (4) |
C7—C6—C8—O3 | −22.2 (3) | C6—C8—O4—Co1vi | −174.15 (14) |
C11—C12—N2—C13 | −1.0 (4) | O7—C9—O8—Co1 | 43.6 (4) |
C11—C12—N2—Co2v | −171.6 (2) | C10—C9—O8—Co1 | −135.76 (18) |
C14—C13—N2—C12 | −1.3 (4) | O4ii—Co1—O8—C9 | −101.0 (2) |
C14—C13—N2—Co2v | 170.1 (2) | O4iii—Co1—O8—C9 | 79.0 (2) |
C5—C4—N1—O6 | 172.6 (2) | O1—Co1—O8—C9 | −13.2 (2) |
C3—C4—N1—O6 | −8.3 (3) | O1i—Co1—O8—C9 | 166.8 (2) |
C5—C4—N1—O5 | −9.3 (3) |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) x, y−1, z; (iii) −x, −y+2, −z+1; (iv) x−1, y, z; (v) x+1, y, z; (vi) x, y+1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W···O3vii | 0.84 | 2.05 | 2.861 (3) | 160 |
O1W—H2W···O2Wviii | 0.85 | 1.93 | 2.773 (3) | 173 |
O3W—H5W···O2ix | 0.82 | 2.01 | 2.820 (2) | 168 |
O3W—H6W···O1Wx | 0.83 | 1.83 | 2.648 (3) | 167 |
O2W—H4WA···O2i | 0.85 (2) | 2.27 (2) | 3.098 (4) | 165 (8) |
O2W—H3WA···O6xi | 0.83 (2) | 2.38 (6) | 3.055 (3) | 138 (8) |
O2W—H3WB···O2Wviii | 0.87 (2) | 2.49 (3) | 3.297 (6) | 154 (6) |
O2W—H4WB···O6xi | 0.89 (5) | 2.54 (5) | 3.055 (4) | 118 (3) |
O2W—H4WB···O2i | 0.89 (5) | 2.54 (5) | 3.098 (3) | 121 (4) |
Symmetry codes: (i) −x, −y+1, −z+1; (vii) −x+1, −y+1, −z+1; (viii) −x+1, −y, −z; (ix) −x, −y+1, −z+2; (x) x−1, y, z+1; (xi) x+1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | [Co3(C6H4NO2)2(C8H3NO6)2(H2O)2]·4H2O |
Mr | 947.32 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 9.1890 (18), 9.3548 (19), 10.390 (2) |
α, β, γ (°) | 78.74 (3), 88.64 (3), 73.68 (3) |
V (Å3) | 840.2 (3) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 1.57 |
Crystal size (mm) | 0.35 × 0.28 × 0.16 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2002) |
Tmin, Tmax | 0.610, 0.788 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4357, 2976, 2667 |
Rint | 0.012 |
(sin θ/λ)max (Å−1) | 0.600 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.027, 0.071, 1.02 |
No. of reflections | 2976 |
No. of parameters | 271 |
No. of restraints | 10 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.40, −0.40 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W···O3i | 0.84 | 2.05 | 2.861 (3) | 160.4 |
O1W—H2W···O2Wii | 0.85 | 1.93 | 2.773 (3) | 172.9 |
O3W—H5W···O2iii | 0.82 | 2.01 | 2.820 (2) | 168.1 |
O3W—H6W···O1Wiv | 0.83 | 1.83 | 2.648 (3) | 167.4 |
O2W—H4WA···O2v | 0.854 (19) | 2.27 (2) | 3.098 (4) | 165 (8) |
O2W—H3WA···O6vi | 0.83 (2) | 2.38 (6) | 3.055 (3) | 138 (8) |
O2W—H3WB···O2Wii | 0.868 (19) | 2.49 (3) | 3.297 (6) | 154 (6) |
O2W—H4WB···O6vi | 0.89 (5) | 2.54 (5) | 3.055 (4) | 118 (3) |
O2W—H4WB···O2v | 0.89 (5) | 2.54 (5) | 3.098 (3) | 121 (4) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, −y, −z; (iii) −x, −y+1, −z+2; (iv) x−1, y, z+1; (v) −x, −y+1, −z+1; (vi) x+1, y−1, z. |
Acknowledgements
This work was supported financially by the National Natural Science Foundation of China (grant Nos. 21171059 and 21003053) and Guangdong Science and Technology Department (grant Nos. 2010B090300031 and 2011B010400023).
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Over the past decades, rational design and construction of metal coordination polymers with aromatic carboxylates have become an attractive area in coordination and supramolecular chemistry, due to the fascinating network topologies they exhibit (Natarajan & Mahata, 2009) and due to industrially focused applications in gas storage, adsorption and separation (Ma et al., 2009), nonlinear optical devices (Zang et al., 2006), and fluorescence (Jiang et al., 2010), etc. Due to versatile coordination modes and easy formation of secondary building units, 5-nitroisophthalate (NIPH) has been widely employed to construct coordination polymers (Chen et al., 2010; Du et al., 2008; Sun et al., 2010).
Most cobalt complexes with 5-nitroisophthalate (NIPH) and aromatic N-donor coligands (pyridine, bipyridine, and imidazole) possess low-dimensional structure characteristics, namely, ladder, loop-like chain, zigzag chain, layer, and grid, etc (Chen et al., 2006; Du et al., 2008; Luo et al., 2003). Cobalt complexes based on NIPH ligand and other carboxylates have been less developed (Wang et al., 2009). In this work, we selected isonicotinic acid (HIN) as the coligand based on the following considerations: (1) it possesses the bifunctional bridging groups with both oxygen and nitrogen donors as a potential linkers and (2) it can adopt various coordination modes in high-dimensional heterometallic frameworks (Amo-Ochoa et al., 2010). Herein, synthesis and crystal structure of a new cobalt compound is presented, which was prepared by hydrothermal reaction of Co(CH3COO)2.4 H2O with 5-nitroisophthalic acid and isonicotinic acid.
The title compound exhibits a two-dimensional layer-like framework. As illustrated in Fig.1, each asymmetric unit contains one and a half CoII ions, one 5-nitroisophthalate (NIPH) anion, an isonicotinate (IN) anion, one ligated and two lattice water molecules, as the Co1II ion lies on a crystallographic inversion centre. In the structure, the Co1II ion is six-coordinated in an O6 donor set with the coordination geometry of a slightly distorted octahedron by four carboxylate oxygen atoms [O1, O1i, O4ii, O4iii, symmetry codes: (i) -x, 1 - y, 1 - z; (ii) x, -1 + y, z; (iii) -x, 2 - y, 1 - z] from four bridging NIPH ligands in the equatorial plane, and the others [O8 and O8i, symmetry code: (i) -x, 1 - y, 1 - z] from two IN anions at the axial sites; the Co2II ion coordinates with one N2iv atom [symmetry code: (iv) -1 + x, y, z] and one carboxylate O7 atom from two IN anions, two carboxylate oxygen atoms [O3ii and O7, symmetry code: (ii) x, -1 + y, z] from two different NIPH anions and one ligated water molecules, displaying a distorted square pyramidal coordination geometry. If the weak Co—O interaction between Co2 and O2 (2.4908 (6) Å) was considered, the coordination configuration of the Co2 ion could also be described as a severely distorted octahedron. The Co—O bond distances are in the range of 2.0206 (18)–2.1624 (16) Å, and the Co—N bond length is equal to 2.1465 (19) Å, all of which are in the normal ranges (Du et al., 2008).
The NIPH ligand acts as µ4-bridge to link four different CoII ions through two carboxylate groups and the IN anion adopts a tridentate-bridging mode to connect three CoII ions. Thus, one Co1II and two Co2II ions are bridged by six carboxylate groups from four NIPH ligands (two carboxylate groups in bis-monodentate mode and two in monodentate bridged mode) and two IN anions (the carboxylate groups in bis-monodentate mode) to form a linear trinuclear secondary building unit (SBU), [Co3(NIPH)2(IN)2(H2O)2] with a Co···Co separation of 3.5086 (10) Å. Every trinuclear SBU is in turn linked to its nearest neighbors in the ab plane, resulting in a two-dimensional layer like structure perpendicular to the c-axis (Fig. 2). Along the a-axis direction neighboring molecules are connected through carboxylate and pyridyl units of the IN anions, along the b-axis through carboxylate groups of the NIPH ligands. Topologically, the trinuclear CoII units can be seen as four-connected nodes and the organic ligands (the NIPH and IN anions) act as two-connected rods. On the basis of this simplification, this two-dimensional structure can be described as a (4,4)-topological network.
There are multiple O–H···O hydrogen bonds in the complex, which include the following types of contacts: (a) between coordinated water molecule and carboxylate oxygen atoms of the NIPH anions [O···O, 2.820 (3) Å], (b) between lattice water molecule and carboxylate oxygen atoms of the NIPH anions [O···O, 2.861 (3) – 3.098 (4) Å] and (c) between coordinated and lattice water molecules [O···O, 2.648 (3) – 3.297 (6) Å]. Thus, these two-dimensional layers are further extended to a three-dimensional supramolecular network (Fig. 3).
The IR spectrum shows characteristic absorptions for the carboxylate stretching vibrations and the coordination of organic carboxylate anions (NIPH and IN) to CoII was confirmed by the absence of υ(COOH) absorption bands of the organic ligands at around 1700 cm-1. The characteristic vibrations of the carboxylate groups are seen in the range 1607–1541 cm-1 for asymmetric stretching and 1461–1360 cm-1 for symmetric stretching. The broad absorption band observed at 3412 cm-1 can be assigned to the O–H stretching vibration, indicating the presence of water molecules.
In summary, a new (4, 4)–two-dimensional layer-like polynuclear CoII coordination polymer was constructed by hydrothermal reaction between Co(II) ions and mixed carboxylate ligands, which is further extended to a three-dimensional supramolecular network through intermolecular hydrogen bonding.