organic compounds
7-Chloro-4-(piperazin-1-yl)quinoline
aCollege of Pharmacy, Howard University, 2300 4th Street, NW, Washington, DC 2059, USA, and bDepartment of Chemistry, Howard University, 525 College Street, NW, Washington, DC 2059, USA
*Correspondence e-mail: amol.kulkarni@howard.edu
There are two molecules in the Z′ = 2) of the title compound, C13H14ClN3, Each molecule is linked by N—H⋯N hydrogen bonds to another of the same type in a chain in [110]. The crystal studied was a non-merohedral twin with components 0.622 (2) and 0.378 (2).
(Related literature
The title compound is an important intermediate in the synthesis of the anti-malarial compound piperaquine {systematic name: 7-chloro-4-[4-[3-[4-(7-chloroquinolin-4-yl)piperazin-1-yl]propyl]piperazin-1-yl]quinoline phosphoric acid}, see: Chen et al. (1982); Hien et al. (2004); Dongre et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812014912/bt5836sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812014912/bt5836Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812014912/bt5836Isup3.cml
A solution of 4,7-dichloroquinoline (10 g, 51 mmole, 1 equiv) and piperazine (13.05 g, 153 mmole, 3 equiv) in 2-propanol (25 ml) was heated to a gentle reflux for 4 h. The solution was cooled to room temperature. Ethyl acetate (50 ml) was added and the reaction mixture was stirred at room temperature for 14 h. It was then poured into a separatory funnel and was washed with water (3 X 50 ml). The organic layer was dried using anhydrous Na2SO4. Removal of the solvent in vacuo resulted in the isolation of the desired compound as pale yellow crystals. The crude product was recrystallized from 2-propanol to yield colorless crystals of the desired compound. mp 112–114 °C; 1H-NMR (CDCl3) d 8.68 (d, J = 4.8 Hz, 1H), 8. 01 (d, J = 9.2 Hz, 1H), 7.69 (d, J = 2.4 Hz, 1H), 7.55 (dd, J = 9.2, 2.4 Hz, 1H), 6.96 (d, J = 4.8 Hz, 1H), 3.12–2.93 (m, 8H).
H atoms were placed in geometrically idealized positions and constrained to ride on their parent atoms with a C—H distance of 0.95 and 0.99 [Uiso(H) = 1.2Ueq(C)]. The H atoms attached to N were refined isotropically. The structure was a non-merohedral twin with components 0.622 (2) and 0.378 (2).
Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell
CrysAlis PRO (Oxford Diffraction, 2007); data reduction: CrysAlis PRO (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C13H14ClN3 | Z = 4 |
Mr = 247.72 | F(000) = 520 |
Triclinic, P1 | Dx = 1.407 Mg m−3 |
a = 7.0048 (6) Å | Cu Kα radiation, λ = 1.54184 Å |
b = 7.8297 (8) Å | Cell parameters from 1440 reflections |
c = 21.4256 (19) Å | θ = 4.1–75.3° |
α = 91.371 (8)° | µ = 2.72 mm−1 |
β = 91.292 (7)° | T = 123 K |
γ = 95.210 (8)° | Triangular plate, colorless |
V = 1169.55 (19) Å3 | 0.43 × 0.35 × 0.12 mm |
Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 6990 independent reflections |
Radiation source: fine-focus sealed tube | 5619 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.000 |
Detector resolution: 10.5081 pixels mm-1 | θmax = 75.9°, θmin = 4.1° |
ω scans | h = −8→8 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007) | k = −9→9 |
Tmin = 0.809, Tmax = 1.000 | l = −20→26 |
6990 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.074 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.228 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | w = 1/[σ2(Fo2) + (0.1441P)2 + 0.6728P] where P = (Fo2 + 2Fc2)/3 |
6990 reflections | (Δ/σ)max = 0.001 |
316 parameters | Δρmax = 0.65 e Å−3 |
0 restraints | Δρmin = −0.60 e Å−3 |
C13H14ClN3 | γ = 95.210 (8)° |
Mr = 247.72 | V = 1169.55 (19) Å3 |
Triclinic, P1 | Z = 4 |
a = 7.0048 (6) Å | Cu Kα radiation |
b = 7.8297 (8) Å | µ = 2.72 mm−1 |
c = 21.4256 (19) Å | T = 123 K |
α = 91.371 (8)° | 0.43 × 0.35 × 0.12 mm |
β = 91.292 (7)° |
Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 6990 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007) | 5619 reflections with I > 2σ(I) |
Tmin = 0.809, Tmax = 1.000 | Rint = 0.000 |
6990 measured reflections |
R[F2 > 2σ(F2)] = 0.074 | 0 restraints |
wR(F2) = 0.228 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.65 e Å−3 |
6990 reflections | Δρmin = −0.60 e Å−3 |
316 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1A | 0.17772 (13) | 0.19345 (12) | 0.52611 (4) | 0.0394 (3) | |
N1A | 0.5120 (4) | −0.0737 (4) | 0.34594 (14) | 0.0319 (6) | |
N2A | 0.9733 (4) | 0.3190 (4) | 0.35392 (14) | 0.0289 (6) | |
N3A | 1.2344 (5) | 0.6024 (4) | 0.32035 (15) | 0.0343 (7) | |
H3AN | 1.333 (6) | 0.688 (5) | 0.3255 (18) | 0.023 (9)* | |
C2A | 0.6631 (6) | −0.0790 (5) | 0.31036 (17) | 0.0324 (7) | |
H2AA | 0.6654 | −0.1744 | 0.2822 | 0.039* | |
C3A | 0.8204 (5) | 0.0455 (5) | 0.31094 (17) | 0.0309 (7) | |
H3AA | 0.9209 | 0.0349 | 0.2825 | 0.037* | |
C4A | 0.8298 (5) | 0.1837 (4) | 0.35280 (16) | 0.0276 (7) | |
C5A | 0.6879 (5) | 0.2915 (4) | 0.45125 (16) | 0.0302 (7) | |
H5AA | 0.7997 | 0.3675 | 0.4595 | 0.036* | |
C6A | 0.5383 (5) | 0.2906 (4) | 0.49154 (16) | 0.0303 (7) | |
H6AA | 0.5461 | 0.3641 | 0.5276 | 0.036* | |
C7A | 0.3736 (5) | 0.1788 (5) | 0.47835 (17) | 0.0328 (7) | |
C8A | 0.3637 (5) | 0.0620 (4) | 0.43035 (17) | 0.0309 (7) | |
H8AA | 0.2523 | −0.0154 | 0.4235 | 0.037* | |
C9A | 0.5227 (5) | 0.0570 (4) | 0.39031 (16) | 0.0285 (7) | |
C10A | 0.6789 (5) | 0.1820 (4) | 0.39786 (16) | 0.0285 (7) | |
C11A | 1.1413 (5) | 0.2939 (5) | 0.31546 (17) | 0.0301 (7) | |
H11A | 1.1048 | 0.2980 | 0.2706 | 0.036* | |
H11B | 1.1863 | 0.1799 | 0.3234 | 0.036* | |
C12A | 1.3017 (5) | 0.4336 (5) | 0.33146 (17) | 0.0326 (7) | |
H12A | 1.3421 | 0.4263 | 0.3758 | 0.039* | |
H12B | 1.4137 | 0.4173 | 0.3053 | 0.039* | |
C13A | 1.0730 (5) | 0.6282 (5) | 0.36040 (18) | 0.0321 (7) | |
H13A | 1.0295 | 0.7433 | 0.3537 | 0.038* | |
H13B | 1.1139 | 0.6219 | 0.4048 | 0.038* | |
C14A | 0.9098 (5) | 0.4920 (4) | 0.34551 (17) | 0.0300 (7) | |
H14A | 0.8018 | 0.5088 | 0.3734 | 0.036* | |
H14B | 0.8641 | 0.5029 | 0.3019 | 0.036* | |
Cl1B | −0.32087 (13) | 0.18514 (12) | −0.02405 (4) | 0.0397 (2) | |
N1B | 0.0489 (4) | −0.0420 (4) | 0.15733 (15) | 0.0335 (6) | |
N2B | 0.5041 (4) | 0.3518 (4) | 0.14536 (14) | 0.0279 (6) | |
N3B | 0.7621 (4) | 0.6426 (4) | 0.17856 (15) | 0.0334 (7) | |
H3BN | 0.870 (6) | 0.730 (5) | 0.1712 (18) | 0.024 (10)* | |
C2B | 0.2060 (6) | −0.0387 (5) | 0.19218 (17) | 0.0335 (8) | |
H2BA | 0.2141 | −0.1278 | 0.2212 | 0.040* | |
C3B | 0.3630 (5) | 0.0859 (5) | 0.19001 (17) | 0.0307 (7) | |
H3BA | 0.4700 | 0.0811 | 0.2178 | 0.037* | |
C4B | 0.3616 (5) | 0.2153 (4) | 0.14743 (16) | 0.0267 (7) | |
C5B | 0.2016 (5) | 0.3037 (4) | 0.04913 (16) | 0.0289 (7) | |
H5BA | 0.3105 | 0.3800 | 0.0403 | 0.035* | |
C6B | 0.0448 (5) | 0.2931 (4) | 0.00929 (16) | 0.0293 (7) | |
H6BA | 0.0455 | 0.3597 | −0.0272 | 0.035* | |
C7B | −0.1172 (5) | 0.1822 (5) | 0.02324 (17) | 0.0325 (7) | |
C8B | −0.1169 (5) | 0.0742 (4) | 0.07227 (17) | 0.0315 (7) | |
H8BA | −0.2261 | −0.0029 | 0.0799 | 0.038* | |
C9B | 0.0492 (5) | 0.0790 (4) | 0.11170 (17) | 0.0286 (7) | |
C10B | 0.2044 (5) | 0.2034 (4) | 0.10308 (16) | 0.0281 (7) | |
C11B | 0.6787 (5) | 0.3355 (5) | 0.18261 (16) | 0.0293 (7) | |
H11C | 0.7254 | 0.2218 | 0.1742 | 0.035* | |
H11D | 0.6506 | 0.3445 | 0.2276 | 0.035* | |
C12B | 0.8319 (5) | 0.4759 (5) | 0.16633 (17) | 0.0313 (7) | |
H12C | 0.9498 | 0.4652 | 0.1917 | 0.038* | |
H12D | 0.8635 | 0.4645 | 0.1217 | 0.038* | |
C13B | 0.5927 (5) | 0.6607 (5) | 0.13965 (18) | 0.0320 (7) | |
H13C | 0.6250 | 0.6497 | 0.0951 | 0.038* | |
H13D | 0.5483 | 0.7759 | 0.1469 | 0.038* | |
C14B | 0.4344 (5) | 0.5242 (4) | 0.15480 (17) | 0.0297 (7) | |
H14C | 0.3963 | 0.5394 | 0.1987 | 0.036* | |
H14D | 0.3208 | 0.5349 | 0.1273 | 0.036* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1A | 0.0319 (5) | 0.0398 (5) | 0.0473 (5) | 0.0056 (4) | 0.0108 (4) | 0.0045 (4) |
N1A | 0.0303 (15) | 0.0247 (14) | 0.0404 (15) | 0.0006 (12) | −0.0019 (12) | 0.0017 (11) |
N2A | 0.0248 (14) | 0.0273 (15) | 0.0352 (14) | 0.0050 (12) | 0.0037 (11) | 0.0018 (11) |
N3A | 0.0282 (15) | 0.0297 (16) | 0.0448 (17) | −0.0010 (12) | 0.0058 (12) | 0.0033 (12) |
C2A | 0.0365 (19) | 0.0235 (16) | 0.0376 (18) | 0.0060 (14) | −0.0009 (14) | −0.0025 (13) |
C3A | 0.0276 (17) | 0.0276 (17) | 0.0385 (18) | 0.0066 (14) | 0.0045 (13) | 0.0017 (13) |
C4A | 0.0231 (16) | 0.0255 (16) | 0.0345 (17) | 0.0038 (13) | −0.0008 (12) | 0.0046 (12) |
C5A | 0.0276 (17) | 0.0252 (16) | 0.0380 (17) | 0.0027 (13) | −0.0003 (13) | 0.0040 (13) |
C6A | 0.0339 (18) | 0.0240 (15) | 0.0338 (16) | 0.0064 (13) | 0.0031 (13) | 0.0017 (12) |
C7A | 0.0319 (18) | 0.0311 (18) | 0.0368 (17) | 0.0080 (14) | 0.0061 (14) | 0.0054 (13) |
C8A | 0.0250 (16) | 0.0244 (16) | 0.0431 (18) | 0.0010 (12) | 0.0003 (13) | 0.0054 (13) |
C9A | 0.0291 (17) | 0.0210 (15) | 0.0351 (17) | 0.0012 (13) | −0.0034 (13) | 0.0026 (12) |
C10A | 0.0266 (17) | 0.0266 (17) | 0.0332 (16) | 0.0064 (14) | 0.0019 (13) | 0.0027 (13) |
C11A | 0.0207 (15) | 0.0298 (17) | 0.0403 (18) | 0.0038 (13) | 0.0045 (13) | 0.0031 (13) |
C12A | 0.0284 (18) | 0.0316 (18) | 0.0383 (17) | 0.0045 (14) | 0.0021 (14) | 0.0039 (14) |
C13A | 0.0276 (17) | 0.0252 (17) | 0.0430 (18) | 0.0004 (13) | 0.0022 (14) | −0.0005 (13) |
C14A | 0.0255 (16) | 0.0256 (16) | 0.0391 (17) | 0.0024 (13) | 0.0025 (13) | 0.0022 (13) |
Cl1B | 0.0304 (5) | 0.0384 (5) | 0.0496 (5) | 0.0016 (4) | −0.0044 (3) | −0.0019 (4) |
N1B | 0.0287 (15) | 0.0258 (14) | 0.0453 (17) | −0.0038 (11) | 0.0085 (12) | 0.0034 (12) |
N2B | 0.0228 (13) | 0.0243 (14) | 0.0368 (15) | 0.0037 (11) | 0.0031 (11) | 0.0004 (11) |
N3B | 0.0272 (15) | 0.0296 (15) | 0.0425 (16) | −0.0039 (12) | 0.0043 (12) | 0.0014 (12) |
C2B | 0.038 (2) | 0.0230 (16) | 0.0394 (19) | 0.0018 (15) | 0.0087 (15) | 0.0044 (13) |
C3B | 0.0264 (17) | 0.0277 (16) | 0.0384 (18) | 0.0025 (14) | 0.0043 (13) | 0.0038 (13) |
C4B | 0.0220 (15) | 0.0225 (16) | 0.0356 (17) | 0.0012 (13) | 0.0063 (13) | −0.0004 (12) |
C5B | 0.0251 (16) | 0.0205 (14) | 0.0407 (17) | −0.0001 (12) | 0.0057 (13) | −0.0011 (12) |
C6B | 0.0305 (17) | 0.0232 (15) | 0.0339 (16) | 0.0015 (13) | 0.0037 (13) | −0.0017 (12) |
C7B | 0.0286 (17) | 0.0282 (17) | 0.0404 (18) | 0.0026 (14) | 0.0018 (14) | −0.0026 (14) |
C8B | 0.0243 (16) | 0.0245 (16) | 0.0454 (18) | −0.0009 (12) | 0.0070 (13) | −0.0027 (13) |
C9B | 0.0258 (16) | 0.0198 (15) | 0.0400 (18) | −0.0004 (13) | 0.0072 (13) | −0.0006 (13) |
C10B | 0.0244 (16) | 0.0226 (16) | 0.0373 (17) | 0.0019 (13) | 0.0057 (13) | −0.0008 (12) |
C11B | 0.0214 (16) | 0.0291 (17) | 0.0377 (17) | 0.0041 (13) | 0.0023 (13) | 0.0022 (13) |
C12B | 0.0224 (16) | 0.0304 (17) | 0.0411 (18) | 0.0015 (13) | 0.0053 (13) | 0.0036 (14) |
C13B | 0.0277 (17) | 0.0248 (16) | 0.0431 (18) | −0.0018 (13) | 0.0041 (14) | 0.0036 (13) |
C14B | 0.0263 (16) | 0.0221 (16) | 0.0406 (18) | 0.0023 (13) | 0.0028 (13) | 0.0002 (13) |
Cl1A—C7A | 1.740 (4) | Cl1B—C7B | 1.733 (4) |
N1A—C2A | 1.321 (5) | N1B—C2B | 1.314 (5) |
N1A—C9A | 1.376 (5) | N1B—C9B | 1.378 (5) |
N2A—C4A | 1.392 (4) | N2B—C4B | 1.396 (4) |
N2A—C11A | 1.477 (4) | N2B—C11B | 1.462 (4) |
N2A—C14A | 1.477 (4) | N2B—C14B | 1.488 (4) |
N3A—C13A | 1.460 (5) | N3B—C13B | 1.454 (5) |
N3A—C12A | 1.466 (5) | N3B—C12B | 1.455 (5) |
N3A—H3AN | 0.92 (4) | N3B—H3BN | 0.99 (4) |
C2A—C3A | 1.402 (5) | C2B—C3B | 1.405 (5) |
C2A—H2AA | 0.9500 | C2B—H2BA | 0.9500 |
C3A—C4A | 1.385 (5) | C3B—C4B | 1.380 (5) |
C3A—H3AA | 0.9500 | C3B—H3BA | 0.9500 |
C4A—C10A | 1.447 (5) | C4B—C10B | 1.433 (5) |
C5A—C6A | 1.372 (5) | C5B—C6B | 1.371 (5) |
C5A—C10A | 1.410 (5) | C5B—C10B | 1.414 (5) |
C5A—H5AA | 0.9500 | C5B—H5BA | 0.9500 |
C6A—C7A | 1.402 (5) | C6B—C7B | 1.408 (5) |
C6A—H6AA | 0.9500 | C6B—H6BA | 0.9500 |
C7A—C8A | 1.356 (5) | C7B—C8B | 1.364 (5) |
C8A—C9A | 1.424 (5) | C8B—C9B | 1.419 (5) |
C8A—H8AA | 0.9500 | C8B—H8BA | 0.9500 |
C9A—C10A | 1.404 (4) | C9B—C10B | 1.411 (4) |
C11A—C12A | 1.523 (5) | C11B—C12B | 1.518 (4) |
C11A—H11A | 0.9900 | C11B—H11C | 0.9900 |
C11A—H11B | 0.9900 | C11B—H11D | 0.9900 |
C12A—H12A | 0.9900 | C12B—H12C | 0.9900 |
C12A—H12B | 0.9900 | C12B—H12D | 0.9900 |
C13A—C14A | 1.514 (5) | C13B—C14B | 1.515 (4) |
C13A—H13A | 0.9900 | C13B—H13C | 0.9900 |
C13A—H13B | 0.9900 | C13B—H13D | 0.9900 |
C14A—H14A | 0.9900 | C14B—H14C | 0.9900 |
C14A—H14B | 0.9900 | C14B—H14D | 0.9900 |
C2A—N1A—C9A | 115.7 (3) | C2B—N1B—C9B | 115.9 (3) |
C4A—N2A—C11A | 115.9 (3) | C4B—N2B—C11B | 116.3 (3) |
C4A—N2A—C14A | 116.3 (3) | C4B—N2B—C14B | 114.5 (3) |
C11A—N2A—C14A | 110.7 (3) | C11B—N2B—C14B | 111.2 (3) |
C13A—N3A—C12A | 109.6 (3) | C13B—N3B—C12B | 109.8 (3) |
C13A—N3A—H3AN | 113 (3) | C13B—N3B—H3BN | 114 (2) |
C12A—N3A—H3AN | 111 (3) | C12B—N3B—H3BN | 107 (2) |
N1A—C2A—C3A | 125.0 (3) | N1B—C2B—C3B | 125.3 (3) |
N1A—C2A—H2AA | 117.5 | N1B—C2B—H2BA | 117.4 |
C3A—C2A—H2AA | 117.5 | C3B—C2B—H2BA | 117.4 |
C4A—C3A—C2A | 120.3 (3) | C4B—C3B—C2B | 119.8 (3) |
C4A—C3A—H3AA | 119.8 | C4B—C3B—H3BA | 120.1 |
C2A—C3A—H3AA | 119.8 | C2B—C3B—H3BA | 120.1 |
C3A—C4A—N2A | 124.3 (3) | C3B—C4B—N2B | 123.6 (3) |
C3A—C4A—C10A | 116.1 (3) | C3B—C4B—C10B | 116.5 (3) |
N2A—C4A—C10A | 119.6 (3) | N2B—C4B—C10B | 119.9 (3) |
C6A—C5A—C10A | 121.3 (3) | C6B—C5B—C10B | 121.2 (3) |
C6A—C5A—H5AA | 119.3 | C6B—C5B—H5BA | 119.4 |
C10A—C5A—H5AA | 119.3 | C10B—C5B—H5BA | 119.4 |
C5A—C6A—C7A | 118.6 (3) | C5B—C6B—C7B | 119.1 (3) |
C5A—C6A—H6AA | 120.7 | C5B—C6B—H6BA | 120.5 |
C7A—C6A—H6AA | 120.7 | C7B—C6B—H6BA | 120.5 |
C8A—C7A—C6A | 122.2 (3) | C8B—C7B—C6B | 121.9 (3) |
C8A—C7A—Cl1A | 120.0 (3) | C8B—C7B—Cl1B | 120.1 (3) |
C6A—C7A—Cl1A | 117.8 (3) | C6B—C7B—Cl1B | 118.1 (3) |
C7A—C8A—C9A | 119.1 (3) | C7B—C8B—C9B | 118.9 (3) |
C7A—C8A—H8AA | 120.5 | C7B—C8B—H8BA | 120.5 |
C9A—C8A—H8AA | 120.5 | C9B—C8B—H8BA | 120.5 |
N1A—C9A—C10A | 124.0 (3) | N1B—C9B—C10B | 123.1 (3) |
N1A—C9A—C8A | 116.5 (3) | N1B—C9B—C8B | 116.8 (3) |
C10A—C9A—C8A | 119.5 (3) | C10B—C9B—C8B | 120.1 (3) |
C9A—C10A—C5A | 118.5 (3) | C9B—C10B—C5B | 118.1 (3) |
C9A—C10A—C4A | 118.2 (3) | C9B—C10B—C4B | 118.6 (3) |
C5A—C10A—C4A | 123.1 (3) | C5B—C10B—C4B | 123.2 (3) |
N2A—C11A—C12A | 109.8 (3) | N2B—C11B—C12B | 109.8 (3) |
N2A—C11A—H11A | 109.7 | N2B—C11B—H11C | 109.7 |
C12A—C11A—H11A | 109.7 | C12B—C11B—H11C | 109.7 |
N2A—C11A—H11B | 109.7 | N2B—C11B—H11D | 109.7 |
C12A—C11A—H11B | 109.7 | C12B—C11B—H11D | 109.7 |
H11A—C11A—H11B | 108.2 | H11C—C11B—H11D | 108.2 |
N3A—C12A—C11A | 109.7 (3) | N3B—C12B—C11B | 109.4 (3) |
N3A—C12A—H12A | 109.7 | N3B—C12B—H12C | 109.8 |
C11A—C12A—H12A | 109.7 | C11B—C12B—H12C | 109.8 |
N3A—C12A—H12B | 109.7 | N3B—C12B—H12D | 109.8 |
C11A—C12A—H12B | 109.7 | C11B—C12B—H12D | 109.8 |
H12A—C12A—H12B | 108.2 | H12C—C12B—H12D | 108.2 |
N3A—C13A—C14A | 109.9 (3) | N3B—C13B—C14B | 110.1 (3) |
N3A—C13A—H13A | 109.7 | N3B—C13B—H13C | 109.6 |
C14A—C13A—H13A | 109.7 | C14B—C13B—H13C | 109.6 |
N3A—C13A—H13B | 109.7 | N3B—C13B—H13D | 109.6 |
C14A—C13A—H13B | 109.7 | C14B—C13B—H13D | 109.6 |
H13A—C13A—H13B | 108.2 | H13C—C13B—H13D | 108.1 |
N2A—C14A—C13A | 110.5 (3) | N2B—C14B—C13B | 109.3 (3) |
N2A—C14A—H14A | 109.6 | N2B—C14B—H14C | 109.8 |
C13A—C14A—H14A | 109.6 | C13B—C14B—H14C | 109.8 |
N2A—C14A—H14B | 109.6 | N2B—C14B—H14D | 109.8 |
C13A—C14A—H14B | 109.6 | C13B—C14B—H14D | 109.8 |
H14A—C14A—H14B | 108.1 | H14C—C14B—H14D | 108.3 |
C9A—N1A—C2A—C3A | −6.3 (5) | C9B—N1B—C2B—C3B | 6.0 (5) |
N1A—C2A—C3A—C4A | 2.9 (5) | N1B—C2B—C3B—C4B | −2.0 (5) |
C2A—C3A—C4A—N2A | −175.4 (3) | C2B—C3B—C4B—N2B | 174.7 (3) |
C2A—C3A—C4A—C10A | 5.0 (5) | C2B—C3B—C4B—C10B | −6.2 (5) |
C11A—N2A—C4A—C3A | −11.6 (4) | C11B—N2B—C4B—C3B | 11.9 (4) |
C14A—N2A—C4A—C3A | 121.2 (4) | C14B—N2B—C4B—C3B | −120.0 (4) |
C11A—N2A—C4A—C10A | 167.9 (3) | C11B—N2B—C4B—C10B | −167.1 (3) |
C14A—N2A—C4A—C10A | −59.3 (4) | C14B—N2B—C4B—C10B | 60.9 (4) |
C10A—C5A—C6A—C7A | −0.6 (5) | C10B—C5B—C6B—C7B | 1.1 (5) |
C5A—C6A—C7A—C8A | 5.8 (5) | C5B—C6B—C7B—C8B | −5.7 (5) |
C5A—C6A—C7A—Cl1A | −174.4 (3) | C5B—C6B—C7B—Cl1B | 174.4 (3) |
C6A—C7A—C8A—C9A | −2.7 (5) | C6B—C7B—C8B—C9B | 2.5 (5) |
Cl1A—C7A—C8A—C9A | 177.4 (3) | Cl1B—C7B—C8B—C9B | −177.6 (3) |
C2A—N1A—C9A—C10A | 1.6 (5) | C2B—N1B—C9B—C10B | −1.8 (5) |
C2A—N1A—C9A—C8A | −178.2 (3) | C2B—N1B—C9B—C8B | 178.1 (3) |
C7A—C8A—C9A—N1A | 174.3 (3) | C7B—C8B—C9B—N1B | −174.7 (3) |
C7A—C8A—C9A—C10A | −5.5 (5) | C7B—C8B—C9B—C10B | 5.2 (5) |
N1A—C9A—C10A—C5A | −169.5 (3) | N1B—C9B—C10B—C5B | 170.4 (3) |
C8A—C9A—C10A—C5A | 10.4 (5) | C8B—C9B—C10B—C5B | −9.4 (5) |
N1A—C9A—C10A—C4A | 6.0 (5) | N1B—C9B—C10B—C4B | −6.2 (5) |
C8A—C9A—C10A—C4A | −174.1 (3) | C8B—C9B—C10B—C4B | 174.0 (3) |
C6A—C5A—C10A—C9A | −7.4 (5) | C6B—C5B—C10B—C9B | 6.3 (5) |
C6A—C5A—C10A—C4A | 177.4 (3) | C6B—C5B—C10B—C4B | −177.3 (3) |
C3A—C4A—C10A—C9A | −9.0 (5) | C3B—C4B—C10B—C9B | 9.8 (5) |
N2A—C4A—C10A—C9A | 171.4 (3) | N2B—C4B—C10B—C9B | −171.0 (3) |
C3A—C4A—C10A—C5A | 166.3 (3) | C3B—C4B—C10B—C5B | −166.6 (3) |
N2A—C4A—C10A—C5A | −13.3 (5) | N2B—C4B—C10B—C5B | 12.6 (5) |
C4A—N2A—C11A—C12A | −168.4 (3) | C4B—N2B—C11B—C12B | 169.6 (3) |
C14A—N2A—C11A—C12A | 56.3 (4) | C14B—N2B—C11B—C12B | −56.9 (4) |
C13A—N3A—C12A—C11A | 61.2 (4) | C13B—N3B—C12B—C11B | −61.4 (4) |
N2A—C11A—C12A—N3A | −58.8 (4) | N2B—C11B—C12B—N3B | 59.1 (4) |
C12A—N3A—C13A—C14A | −60.7 (4) | C12B—N3B—C13B—C14B | 61.3 (4) |
C4A—N2A—C14A—C13A | 168.8 (3) | C4B—N2B—C14B—C13B | −169.5 (3) |
C11A—N2A—C14A—C13A | −56.1 (4) | C11B—N2B—C14B—C13B | 56.1 (4) |
N3A—C13A—C14A—N2A | 58.1 (4) | N3B—C13B—C14B—N2B | −57.8 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N3A—H3AN···N1Ai | 0.92 (4) | 2.18 (4) | 3.083 (4) | 166 (4) |
N3B—H3BN···N1Bi | 0.99 (4) | 2.12 (4) | 3.088 (4) | 166 (4) |
Symmetry code: (i) x+1, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | C13H14ClN3 |
Mr | 247.72 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 123 |
a, b, c (Å) | 7.0048 (6), 7.8297 (8), 21.4256 (19) |
α, β, γ (°) | 91.371 (8), 91.292 (7), 95.210 (8) |
V (Å3) | 1169.55 (19) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 2.72 |
Crystal size (mm) | 0.43 × 0.35 × 0.12 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Ruby Gemini diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2007) |
Tmin, Tmax | 0.809, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6990, 6990, 5619 |
Rint | 0.000 |
(sin θ/λ)max (Å−1) | 0.629 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.074, 0.228, 1.09 |
No. of reflections | 6990 |
No. of parameters | 316 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.65, −0.60 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N3A—H3AN···N1Ai | 0.92 (4) | 2.18 (4) | 3.083 (4) | 166 (4) |
N3B—H3BN···N1Bi | 0.99 (4) | 2.12 (4) | 3.088 (4) | 166 (4) |
Symmetry code: (i) x+1, y+1, z. |
Acknowledgements
AAK wishes to acknowledge RCMI, Howard University, Center for Drug Research and Development, Howard University and the District of Columbia Developmental Center for AIDS Research (P30AI087714). RJB wishes to acknowledge the NSF–MRI program (grant CHE-0619278) for funds to purchase the diffractometer. This project was supported by grant No. D34HP16042-03-03 from the Health Resources and Services Administration (HRSA).
References
Chen, L., Qu, F. Y. & Zhou, Y. C. (1982). Chin. Med. J. 95, 281–286. CAS PubMed Web of Science Google Scholar
Dongre, V. G., Karmuse, P. P., Ghugare, P. D., Gupta, M., Nerurkar, B., Shaha, C. & Kumar, A. (2007). J. Pharm. Biomed. Anal. 43, 185–195. Web of Science CrossRef Google Scholar
Hien, T. T., Dolecek, C., Mai, P. P., Dung, N. T., Troung, N. T., Thai, L. H., An, D. T. H., Thanh, T. T., Stepniewska, K., White, N. J. & Farrar, J. (2004). Lancet, 363, 18–22. CrossRef PubMed CAS Google Scholar
Oxford Diffraction (2007). CrysAlis PRO and CrysAlis RED. Oxford Diffraction Ltd, Abingdon, England. Google Scholar
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Recrystallization of the title compound from 2-propanol removes low levels (1–4%) of impurities that are present from the manufacturing process. Impurities in the desired product arise from the presence of 4,5-dichloroquinoline in 4,7-DCQ and are difficult to remove from the manufacturing process of commercial malaria drugs, including amodiaquine and piperaquine (Dongre et al., 2007).
In view of the pharmaceutical importance of this intermediate its crystal structure was determined. There are two molecules in the asymmetric unit (Z' = 2). Each molecule is linked by N—H···N hydrogen bonds to another of the same type in a chain in the b direction.