1-Octyl-1H-benzimidazol-2(3H)-one

Belaziz, D.; Kandri Rodi, Y.; Essassi, E.M.; El Ammari, L.

doi:10.1107/S1600536812013384

organic compounds

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ISSN: 2056-9890

Volume 68| Part 5| May 2012| Page o1276

doi:10.1107/S1600536812013384

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1-Octyl-1H-benzimidazol-2(3H)-one

Dounia Belaziz,^a ^* Youssef Kandri Rodi,^a El Mokhtar Essassi ^b,^c and Lahcen El Ammari ^d

^aLaboratoire de Chimie Organique Appliquée, Université Sidi Mohamed Ben Abdallah, Faculté des Sciences et Techniques, Route d'immouzzer, BP 2202 Fès, Morocco, ^bLaboratoire de Chimie Organique Hétérocyclique URAC21, Faculté des Sciences, Université Mohammed V-Agdal, Av. Ibn Battouta, BP 1014, Rabat, Morocco, ^cInstitute of Nanmaterials and Nanotechnology, MASCIR, Rabat, Morocco, and ^dLaboratoire de Chimie du Solide Appliquée, Faculté des Sciences, Université Mohammed V-Agdal, Avenue Ibn Battouta, BP 1014, Rabat, Morocco
^*Correspondence e-mail: d_belaziz@yahoo.fr

(Received 26 March 2012; accepted 27 March 2012; online 4 April 2012)

In the title compound, C₁₅H₂₂N₂O, the octyl group adopts an all-trans conformation. In the crystal, molecules form centrosymmetric dimers with an R₂²(8) graph-set motif, linked by pairs of N—H⋯O hydrogen bonds. In addition, C—H⋯O contacts are observed.

Related literature

For background to benzimidazol-2-one, see: Soderlind et al. (1999 ). For similar structures, see: Ouzidan et al. (2011 ); Kandri Rodi et al. (2011 ).

Experimental

Crystal data

C₁₅H₂₂N₂O
M_r = 246.35
Monoclinic, P 2₁ /c
a = 14.8888 (18) Å
b = 5.8395 (6) Å
c = 16.6778 (19) Å
β = 91.448 (3)°
V = 1449.6 (3) Å³
Z = 4
Mo Kα radiation
μ = 0.07 mm⁻¹
T = 296 K
0.54 × 0.43 × 0.12 mm

Data collection

Bruker X8 APEX diffractometer
8760 measured reflections
3020 independent reflections
1971 reflections with I > 2σ(I)
R_int = 0.030

Refinement

R[F² > 2σ(F²)] = 0.047
wR(F²) = 0.143
S = 1.03
3020 reflections
164 parameters
H-atom parameters constrained
Δρ_max = 0.18 e Å⁻³
Δρ_min = −0.14 e Å⁻³

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A	D—H	H⋯A	D⋯A	D—H⋯A
N1—H1⋯O1ⁱ	0.86	2.01	2.8257 (19)	159
C4—H4⋯O1ⁱⁱ	0.93	2.52	3.312 (2)	144
Symmetry codes: (i) -x+2, -y, -z+1; (ii) $[x, -y+{\script{1\over 2}}, z-{\script{1\over 2}}]$ .

Data collection: APEX2 (Bruker, 2005 ); cell refinement: SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ); software used to prepare material for publication: PLATON (Spek, 2009 ) and publCIF (Westrip, 2010 ).

Supporting information

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536812013384/bt5862sup1.cif

Structure factors: contains datablock I. DOI: 10.1107/S1600536812013384/bt5862Isup2.hkl

Supporting information file. DOI: 10.1107/S1600536812013384/bt5862Isup3.cml

checkCIF report

Comment top

Benzimidazol-2-one derivatives are useful heterocyclic building blocks and are prominent structural elements of compounds demonstrating a wide variety of pharmacological and biochemical properties (Soderlind et al., 1999).

In this work, we have been able to react 1H-benzimidazol-2(3H)-one with 1-bromooctane in the presence of a catalytic quantity of tetra-n-butylammonium bromide under mild conditions to furnish the title compound (Scheme I).

The 1-octyl-1H-benzimidazol-2(3H)-one molecule structure is built up from fused six-and five-membered rings linked to C₈H₁₇ chain as shown in Fig.1. The fused-ring system is essentially planar, with a maximum deviation of 0.0045 (17) Å and 0.0080 (13) Å for C7 and N2 respectively. The dihedral angle between them does not exceed 1.20 (9)°. The octyl group is nearly perpendicular to the benzimidazole plane as indicated by the torsion angle of C1 N2 C8 C9 = -105.19(0.19)°. The structure of the title compound is similar to 1-nonyl-1H-benzimidazol-2(3H)-one (Ouzidan et al., 2011) and 5-chloro-1-nonyl-1H-benzimidazol-2(3H)-one (Kandri Rodi et al., 2011).

In the crystal, the molecules form centrosymmetric dimers linked by N—H···O hydrogen bonds with R₂²(8) graph set motif.

Related literature top

For background to benzimidazol-2-one, see: Soderlind et al. (1999). For similar structures, see: Ouzidan et al. (2011); Kandri Rodi et al. (2011).

Experimental top

To 1H-benzimidazol-2(3H)-one (0,2 g, 1,5 mmol), potassium carbonate (0.41 g, 3 mmol), and tetra-n-butylammonium bromide (0.1 g, 0.3 mmol) in DMF (15 ml) was added 1-bromooctane (0.3 ml, 1.8 mmol). Stirring was continued at room temperature for 6 h. The salt was removed by filtration and the filtrate concentrated under reduced pressure. The residue was separated by chromatography on a column of silica gel with ethyl acetate/hexane (1/2) as eluent. Colorless crystals were isolated when the solvent was allowed to evaporate.

Computing details top

Data collection: APEX2 (Bruker, 2005); cell refinement: SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2009) and publCIF (Westrip, 2010).

Figures top

	Fig. 1. Molecular structure of the title compound with the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are represented as small circles.
	Fig. 2. Molecule and its symmetry through the inversion center linked by hydrogen bonds and building dimers.

1-Octyl-1H-benzimidazol-2(3H)-one top

Crystal data top

C₁₅H₂₂N₂O	F(000) = 536
M_r = 246.35	D_x = 1.129 Mg m⁻³
Monoclinic, P2₁/c	Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc	Cell parameters from 3020 reflections
a = 14.8888 (18) Å	θ = 2.4–26.5°
b = 5.8395 (6) Å	µ = 0.07 mm⁻¹
c = 16.6778 (19) Å	T = 296 K
β = 91.448 (3)°	Needle, colourless
V = 1449.6 (3) Å³	0.54 × 0.43 × 0.12 mm
Z = 4

Data collection top

Bruker X8 APEX diffractometer	1971 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube	R_int = 0.030
Graphite monochromator	θ_max = 26.5°, θ_min = 2.4°
ϕ and ω scans	h = −18→18
8760 measured reflections	k = −5→7
3020 independent reflections	l = −19→20

Refinement top

Refinement on F²	Secondary atom site location: difference Fourier map
Least-squares matrix: full	Hydrogen site location: difference Fourier map
R[F² > 2σ(F²)] = 0.047	H-atom parameters constrained
wR(F²) = 0.143	w = 1/[σ²(F_o²) + (0.0608P)² + 0.2949P] where P = (F_o² + 2F_c²)/3
S = 1.03	(Δ/σ)_max < 0.001
3020 reflections	Δρ_max = 0.18 e Å⁻³
164 parameters	Δρ_min = −0.14 e Å⁻³
0 restraints	Extinction correction: SHELXL97 (Sheldrick, 2008), Fc^*=kFc[1+0.001xFc²λ³/sin(2θ)]^-1/4
Primary atom site location: structure-invariant direct methods	Extinction coefficient: 0.010 (2)

Crystal data top

C₁₅H₂₂N₂O	V = 1449.6 (3) Å³
M_r = 246.35	Z = 4
Monoclinic, P2₁/c	Mo Kα radiation
a = 14.8888 (18) Å	µ = 0.07 mm⁻¹
b = 5.8395 (6) Å	T = 296 K
c = 16.6778 (19) Å	0.54 × 0.43 × 0.12 mm
β = 91.448 (3)°

Data collection top

Bruker X8 APEX diffractometer	1971 reflections with I > 2σ(I)
8760 measured reflections	R_int = 0.030
3020 independent reflections

Refinement top

R[F² > 2σ(F²)] = 0.047	0 restraints
wR(F²) = 0.143	H-atom parameters constrained
S = 1.03	Δρ_max = 0.18 e Å⁻³
3020 reflections	Δρ_min = −0.14 e Å⁻³
164 parameters

Special details top

Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.

Refinement. Refinement of F² against all reflections. The weighted R-factor wR and goodness of fit S are based on F², conventional R-factors R are based on F, with F set to zero for negative F². The threshold expression of F² > 2σ(F²) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F² are statistically about twice as large as those based on F, and R- factors based on all data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å²) top

	x	y	z	U_iso*/U_eq
O1	0.94346 (9)	0.1963 (2)	0.56368 (7)	0.0642 (4)
N1	0.94058 (10)	0.1858 (2)	0.42412 (8)	0.0547 (4)
H1	0.9690	0.0598	0.4166	0.066*
N2	0.87525 (9)	0.4734 (2)	0.48345 (8)	0.0517 (4)
C2	0.90690 (11)	0.3264 (3)	0.36345 (10)	0.0486 (4)
C1	0.92224 (11)	0.2755 (3)	0.49722 (10)	0.0509 (4)
C7	0.86541 (11)	0.5096 (3)	0.40093 (10)	0.0499 (4)
C3	0.90920 (12)	0.3128 (3)	0.28082 (10)	0.0596 (5)
H3	0.9368	0.1908	0.2554	0.072*
C6	0.82615 (14)	0.6843 (3)	0.35775 (12)	0.0660 (5)
H6	0.7991	0.8074	0.3830	0.079*
C9	0.74157 (14)	0.6002 (4)	0.55652 (12)	0.0696 (6)
H9A	0.7232	0.7133	0.5954	0.084*
H9B	0.7117	0.6367	0.5058	0.084*
C4	0.86880 (14)	0.4880 (4)	0.23756 (11)	0.0684 (6)
H4	0.8688	0.4832	0.1818	0.082*
C8	0.84181 (13)	0.6198 (3)	0.54643 (11)	0.0613 (5)
H8A	0.8565	0.7776	0.5343	0.074*
H8B	0.8721	0.5802	0.5967	0.074*
C5	0.82845 (15)	0.6697 (4)	0.27511 (12)	0.0721 (6)
H5	0.8022	0.7852	0.2441	0.087*
C10	0.71026 (13)	0.3677 (4)	0.58346 (13)	0.0743 (6)
H10A	0.7399	0.3306	0.6343	0.089*
H10B	0.7282	0.2540	0.5446	0.089*
C11	0.60948 (14)	0.3539 (4)	0.59315 (15)	0.0855 (7)
H11A	0.5922	0.4626	0.6340	0.103*
H11B	0.5800	0.3994	0.5431	0.103*
C12	0.57598 (15)	0.1199 (4)	0.61598 (16)	0.0896 (7)
H12B	0.6050	0.0758	0.6663	0.107*
H12A	0.5944	0.0112	0.5756	0.107*
C13	0.47537 (15)	0.1006 (5)	0.62485 (16)	0.0932 (8)
H13A	0.4568	0.2077	0.6657	0.112*
H13B	0.4460	0.1449	0.5746	0.112*
C14	0.44383 (18)	−0.1364 (6)	0.64722 (19)	0.1112 (9)
H14A	0.4632	−0.2430	0.6065	0.133*
H14B	0.4734	−0.1797	0.6974	0.133*
C15	0.3454 (2)	−0.1625 (6)	0.6560 (2)	0.1342 (12)
H15A	0.3320	−0.3183	0.6697	0.201*
H15B	0.3152	−0.1235	0.6064	0.201*
H15C	0.3255	−0.0627	0.6977	0.201*

Atomic displacement parameters (Å²) top

	U¹¹	U²²	U³³	U¹²	U¹³	U²³
O1	0.0772 (8)	0.0636 (8)	0.0520 (8)	0.0168 (6)	0.0057 (6)	0.0123 (6)
N1	0.0628 (9)	0.0464 (8)	0.0552 (9)	0.0099 (7)	0.0081 (7)	−0.0002 (7)
N2	0.0616 (9)	0.0464 (8)	0.0471 (8)	0.0075 (7)	0.0023 (6)	0.0000 (6)
C2	0.0494 (9)	0.0448 (9)	0.0518 (9)	−0.0031 (7)	0.0033 (7)	0.0014 (8)
C1	0.0515 (9)	0.0476 (10)	0.0538 (10)	0.0006 (8)	0.0054 (7)	0.0034 (8)
C7	0.0569 (10)	0.0452 (9)	0.0474 (9)	−0.0018 (8)	0.0001 (7)	0.0005 (7)
C3	0.0656 (11)	0.0592 (11)	0.0543 (11)	−0.0016 (9)	0.0079 (8)	−0.0064 (9)
C6	0.0856 (14)	0.0506 (11)	0.0615 (12)	0.0135 (10)	−0.0020 (9)	0.0009 (9)
C9	0.0782 (13)	0.0693 (13)	0.0614 (12)	0.0253 (11)	0.0050 (9)	−0.0062 (10)
C4	0.0807 (13)	0.0761 (14)	0.0483 (10)	−0.0052 (11)	0.0001 (9)	0.0033 (10)
C8	0.0783 (13)	0.0520 (11)	0.0536 (10)	0.0100 (9)	0.0000 (9)	−0.0082 (9)
C5	0.0938 (15)	0.0654 (13)	0.0569 (12)	0.0094 (11)	−0.0057 (10)	0.0111 (10)
C10	0.0684 (13)	0.0785 (14)	0.0764 (14)	0.0186 (11)	0.0086 (10)	0.0031 (11)
C11	0.0713 (14)	0.0938 (17)	0.0919 (16)	0.0211 (12)	0.0106 (11)	0.0036 (14)
C12	0.0739 (14)	0.0947 (18)	0.1004 (18)	0.0153 (13)	0.0087 (12)	−0.0010 (15)
C13	0.0711 (14)	0.107 (2)	0.1020 (18)	0.0144 (14)	0.0064 (12)	−0.0025 (16)
C14	0.0817 (17)	0.112 (2)	0.140 (3)	0.0135 (16)	0.0050 (16)	0.0126 (19)
C15	0.088 (2)	0.141 (3)	0.174 (3)	0.0011 (19)	0.0011 (19)	0.013 (2)

Geometric parameters (Å, º) top

O1—C1	1.235 (2)	C8—H8B	0.9700
N1—C1	1.361 (2)	C5—H5	0.9300
N1—C2	1.387 (2)	C10—C11	1.515 (3)
N1—H1	0.8600	C10—H10A	0.9700
N2—C1	1.367 (2)	C10—H10B	0.9700
N2—C7	1.396 (2)	C11—C12	1.507 (4)
N2—C8	1.452 (2)	C11—H11A	0.9700
C2—C3	1.382 (2)	C11—H11B	0.9700
C2—C7	1.391 (2)	C12—C13	1.513 (3)
C7—C6	1.371 (2)	C12—H12B	0.9700
C3—C4	1.381 (3)	C12—H12A	0.9700
C3—H3	0.9300	C13—C14	1.511 (4)
C6—C5	1.382 (3)	C13—H13A	0.9700
C6—H6	0.9300	C13—H13B	0.9700
C9—C10	1.507 (3)	C14—C15	1.484 (4)
C9—C8	1.511 (3)	C14—H14A	0.9700
C9—H9A	0.9700	C14—H14B	0.9700
C9—H9B	0.9700	C15—H15A	0.9600
C4—C5	1.378 (3)	C15—H15B	0.9600
C4—H4	0.9300	C15—H15C	0.9600
C8—H8A	0.9700

C1—N1—C2	110.42 (14)	C6—C5—H5	119.2
C1—N1—H1	124.8	C9—C10—C11	113.20 (18)
C2—N1—H1	124.8	C9—C10—H10A	108.9
C1—N2—C7	109.50 (14)	C11—C10—H10A	108.9
C1—N2—C8	124.01 (14)	C9—C10—H10B	108.9
C7—N2—C8	126.49 (14)	C11—C10—H10B	108.9
C3—C2—N1	132.54 (16)	H10A—C10—H10B	107.8
C3—C2—C7	120.98 (16)	C12—C11—C10	114.20 (18)
N1—C2—C7	106.48 (14)	C12—C11—H11A	108.7
O1—C1—N1	127.41 (16)	C10—C11—H11A	108.7
O1—C1—N2	125.84 (16)	C12—C11—H11B	108.7
N1—C1—N2	106.75 (14)	C10—C11—H11B	108.7
C6—C7—C2	121.62 (16)	H11A—C11—H11B	107.6
C6—C7—N2	131.52 (16)	C11—C12—C13	115.3 (2)
C2—C7—N2	106.85 (14)	C11—C12—H12B	108.5
C4—C3—C2	117.20 (17)	C13—C12—H12B	108.5
C4—C3—H3	121.4	C11—C12—H12A	108.5
C2—C3—H3	121.4	C13—C12—H12A	108.5
C7—C6—C5	117.19 (18)	H12B—C12—H12A	107.5
C7—C6—H6	121.4	C14—C13—C12	114.0 (2)
C5—C6—H6	121.4	C14—C13—H13A	108.7
C10—C9—C8	114.54 (16)	C12—C13—H13A	108.7
C10—C9—H9A	108.6	C14—C13—H13B	108.7
C8—C9—H9A	108.6	C12—C13—H13B	108.7
C10—C9—H9B	108.6	H13A—C13—H13B	107.6
C8—C9—H9B	108.6	C15—C14—C13	115.6 (2)
H9A—C9—H9B	107.6	C15—C14—H14A	108.4
C5—C4—C3	121.48 (18)	C13—C14—H14A	108.4
C5—C4—H4	119.3	C15—C14—H14B	108.4
C3—C4—H4	119.3	C13—C14—H14B	108.4
N2—C8—C9	113.18 (15)	H14A—C14—H14B	107.4
N2—C8—H8A	108.9	C14—C15—H15A	109.5
C9—C8—H8A	108.9	C14—C15—H15B	109.5
N2—C8—H8B	108.9	H15A—C15—H15B	109.5
C9—C8—H8B	108.9	C14—C15—H15C	109.5
H8A—C8—H8B	107.8	H15A—C15—H15C	109.5
C4—C5—C6	121.53 (19)	H15B—C15—H15C	109.5
C4—C5—H5	119.2

C1—N1—C2—C3	178.89 (18)	N1—C2—C3—C4	−179.26 (18)
C1—N1—C2—C7	−0.48 (18)	C7—C2—C3—C4	0.0 (3)
C2—N1—C1—O1	−178.99 (16)	C2—C7—C6—C5	0.8 (3)
C2—N1—C1—N2	0.88 (18)	N2—C7—C6—C5	179.37 (18)
C7—N2—C1—O1	178.93 (16)	C2—C3—C4—C5	0.5 (3)
C8—N2—C1—O1	−1.0 (3)	C1—N2—C8—C9	−105.19 (19)
C7—N2—C1—N1	−0.95 (18)	C7—N2—C8—C9	74.9 (2)
C8—N2—C1—N1	179.15 (15)	C10—C9—C8—N2	64.2 (2)
C3—C2—C7—C6	−0.7 (3)	C3—C4—C5—C6	−0.3 (3)
N1—C2—C7—C6	178.77 (17)	C7—C6—C5—C4	−0.3 (3)
C3—C2—C7—N2	−179.57 (15)	C8—C9—C10—C11	179.88 (17)
N1—C2—C7—N2	−0.11 (17)	C9—C10—C11—C12	177.1 (2)
C1—N2—C7—C6	−178.07 (19)	C10—C11—C12—C13	−179.1 (2)
C8—N2—C7—C6	1.8 (3)	C11—C12—C13—C14	179.6 (2)
C1—N2—C7—C2	0.66 (18)	C12—C13—C14—C15	−179.7 (3)
C8—N2—C7—C2	−179.44 (15)

Hydrogen-bond geometry (Å, º) top

D—H···A	D—H	H···A	D···A	D—H···A
N1—H1···O1ⁱ	0.86	2.01	2.8257 (19)	159
C4—H4···O1ⁱⁱ	0.93	2.52	3.312 (2)	144

Symmetry codes: (i) −x+2, −y, −z+1; (ii) x, −y+1/2, z−1/2.

Experimental details

Crystal data
Chemical formula	C₁₅H₂₂N₂O
M_r	246.35
Crystal system, space group	Monoclinic, P2₁/c
Temperature (K)	296
a, b, c (Å)	14.8888 (18), 5.8395 (6), 16.6778 (19)
β (°)	91.448 (3)
V (Å³)	1449.6 (3)
Z	4
Radiation type	Mo Kα
µ (mm⁻¹)	0.07
Crystal size (mm)	0.54 × 0.43 × 0.12

Data collection
Diffractometer	Bruker X8 APEX diffractometer
Absorption correction	–
No. of measured, independent and observed [I > 2σ(I)] reflections	8760, 3020, 1971
R_int	0.030
(sin θ/λ)_max (Å⁻¹)	0.628

Refinement
R[F² > 2σ(F²)], wR(F²), S	0.047, 0.143, 1.03
No. of reflections	3020
No. of parameters	164
H-atom treatment	H-atom parameters constrained
Δρ_max, Δρ_min (e Å⁻³)	0.18, −0.14

Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), PLATON (Spek, 2009) and publCIF (Westrip, 2010).

Hydrogen-bond geometry (Å, º) top

D—H···A	D—H	H···A	D···A	D—H···A
N1—H1···O1ⁱ	0.86	2.01	2.8257 (19)	159.2
C4—H4···O1ⁱⁱ	0.93	2.52	3.312 (2)	143.8

Symmetry codes: (i) −x+2, −y, −z+1; (ii) x, −y+1/2, z−1/2.

Acknowledgements

The authors thank the Unit of Support for Technical and Scientific Research (UATRS, CNRST) for the X-ray measurements.

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