metal-organic compounds
Bis(3-acetylpyridine-κN)diaquabis(selenocyanato-κN)cobalt(II)
aInstitut für Anorganische Chemie, Christian-Albrechts-Universität Kiel, Max-Eyth-Strasse 2, 24118 Kiel, Germany
*Correspondence e-mail: jwerner@ac.uni-kiel.de
In the 2(C7H7NO)2(H2O)2], the Co2+ cation is coordinated by two selenocyanate anions, two 3-acetylpyridine ligands and two water molecules within a slightly distorted CoN4O2 octahedron. The consists of one Co2+ cation, which is located on a center of inversion, as well as one selenocyanate anion, one 3-acetylpyridine ligand and one water molecule in general positions. Whereas one of the water H atoms makes a classical O—H⋯O hydrogen bond, the other shows a O—H⋯Se interaction.
of the title compound, [Co(NCSe)Related literature
For general background to this work, see: Näther & Greve (2003). For the synthesis, structures and properties of the corresponding compounds with pyridine, see: Boeckmann & Näther (2010, 2011, 2012).
Experimental
Crystal data
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Refinement
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Data collection: X-AREA (Stoe & Cie, 2008); cell X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP in SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2011).; software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536812018387/bt5898sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812018387/bt5898Isup2.hkl
Potassium selenocyanate and 3-acetylpyridine were purchased from Alfa Aesar and the Co(NO3)2.6 H2O obtained from Merck. The title compound was prepared by the reaction of 72.8 mg Co(NO3)2.6 H2O (0.25 mmol), 64.8 mg KSeCN (0.45 mmol) and 54.6 µL 3-acetylpyridine (0.50 mmol) in 1.5 mL H2O at RT in a closed 3 ml snap cap vial. After three days pink blocks of the title compound were obtained.
The C-H H atoms were positioned with idealized geometry (methyl H atoms allowed to rotate but not to tip) and were refined isotropic with Uiso(H) = 1.2 Ueq(C) for aromatic H atoms (1.5 for methyl H atoms) using a riding model with C—H = 0.93 Å (aromatic) and with C—H = 0.96 Å (methyl). The O-H H atom were located in difference map, their bond lengths set to ideal values of 0.84 Å and afterwards they were refined using a riding model with Uiso(H) = 1.5 Ueq(O).
Data collection: X-AREA (Stoe & Cie, 2008); cell
X-AREA (Stoe & Cie, 2008); data reduction: X-AREA (Stoe & Cie, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP in SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2011).; software used to prepare material for publication: publCIF (Westrip, 2010).[Co(NCSe)2(C7H7NO)2(H2O)2] | F(000) = 1076 |
Mr = 547.19 | Dx = 1.795 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 16689 reflections |
a = 19.1098 (6) Å | θ = 2.6–27.9° |
b = 9.0064 (4) Å | µ = 4.47 mm−1 |
c = 14.9734 (5) Å | T = 293 K |
β = 128.203 (2)° | Block, pink |
V = 2025.13 (13) Å3 | 0.35 × 0.27 × 0.19 mm |
Z = 4 |
Stoe IPDS-2 diffractometer | 2409 independent reflections |
Radiation source: fine-focus sealed tube | 2260 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.028 |
ω scans | θmax = 27.9°, θmin = 2.6° |
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008) | h = −25→24 |
Tmin = 0.240, Tmax = 0.423 | k = −11→11 |
16689 measured reflections | l = −19→19 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.029 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.066 | H-atom parameters constrained |
S = 1.12 | w = 1/[σ2(Fo2) + (0.0275P)2 + 2.5784P] where P = (Fo2 + 2Fc2)/3 |
2409 reflections | (Δ/σ)max < 0.001 |
125 parameters | Δρmax = 0.50 e Å−3 |
0 restraints | Δρmin = −0.45 e Å−3 |
[Co(NCSe)2(C7H7NO)2(H2O)2] | V = 2025.13 (13) Å3 |
Mr = 547.19 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 19.1098 (6) Å | µ = 4.47 mm−1 |
b = 9.0064 (4) Å | T = 293 K |
c = 14.9734 (5) Å | 0.35 × 0.27 × 0.19 mm |
β = 128.203 (2)° |
Stoe IPDS-2 diffractometer | 2409 independent reflections |
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008) | 2260 reflections with I > 2σ(I) |
Tmin = 0.240, Tmax = 0.423 | Rint = 0.028 |
16689 measured reflections |
R[F2 > 2σ(F2)] = 0.029 | 0 restraints |
wR(F2) = 0.066 | H-atom parameters constrained |
S = 1.12 | Δρmax = 0.50 e Å−3 |
2409 reflections | Δρmin = −0.45 e Å−3 |
125 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Co1 | 0.5000 | 0.5000 | 0.0000 | 0.03364 (10) | |
Se1 | 0.725951 (16) | 0.09800 (3) | 0.20771 (2) | 0.05020 (9) | |
C1 | 0.65776 (13) | 0.2600 (2) | 0.13699 (18) | 0.0372 (4) | |
N1 | 0.61139 (12) | 0.3598 (2) | 0.09124 (17) | 0.0431 (4) | |
O1 | 0.55451 (11) | 0.64233 (17) | 0.14168 (13) | 0.0450 (4) | |
H1O | 0.5265 | 0.7200 | 0.1249 | 0.068* | |
H2O | 0.6080 | 0.6587 | 0.1792 | 0.068* | |
N11 | 0.43968 (12) | 0.36819 (19) | 0.05628 (16) | 0.0393 (4) | |
C11 | 0.44407 (14) | 0.2201 (2) | 0.06235 (18) | 0.0373 (4) | |
H11 | 0.4741 | 0.1709 | 0.0406 | 0.045* | |
C12 | 0.40582 (14) | 0.1366 (2) | 0.09965 (17) | 0.0370 (4) | |
C13 | 0.36145 (18) | 0.2091 (3) | 0.1322 (2) | 0.0499 (6) | |
H13 | 0.3339 | 0.1558 | 0.1560 | 0.060* | |
C14 | 0.3585 (2) | 0.3627 (3) | 0.1289 (3) | 0.0574 (7) | |
H14 | 0.3303 | 0.4146 | 0.1524 | 0.069* | |
C15 | 0.39775 (18) | 0.4364 (3) | 0.0905 (2) | 0.0497 (6) | |
H15 | 0.3952 | 0.5395 | 0.0880 | 0.060* | |
C16 | 0.41692 (16) | −0.0284 (2) | 0.10701 (19) | 0.0423 (5) | |
C17 | 0.3525 (2) | −0.1217 (3) | 0.1065 (3) | 0.0614 (7) | |
H17A | 0.2945 | −0.1129 | 0.0342 | 0.092* | |
H17B | 0.3500 | −0.0890 | 0.1655 | 0.092* | |
H17C | 0.3713 | −0.2236 | 0.1194 | 0.092* | |
O11 | 0.47857 (13) | −0.08133 (19) | 0.11398 (17) | 0.0558 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.03083 (19) | 0.02384 (18) | 0.0412 (2) | 0.00276 (13) | 0.01973 (16) | 0.00073 (14) |
Se1 | 0.04556 (14) | 0.04665 (15) | 0.06007 (16) | 0.01964 (10) | 0.03351 (12) | 0.01574 (11) |
C1 | 0.0309 (9) | 0.0380 (10) | 0.0403 (11) | 0.0027 (8) | 0.0208 (9) | −0.0010 (8) |
N1 | 0.0335 (9) | 0.0369 (9) | 0.0504 (10) | 0.0059 (7) | 0.0217 (8) | 0.0035 (8) |
O1 | 0.0406 (8) | 0.0337 (8) | 0.0491 (9) | 0.0013 (6) | 0.0218 (7) | −0.0061 (6) |
N11 | 0.0400 (9) | 0.0303 (9) | 0.0499 (10) | 0.0021 (7) | 0.0289 (8) | 0.0011 (7) |
C11 | 0.0387 (10) | 0.0302 (10) | 0.0435 (11) | 0.0021 (8) | 0.0258 (9) | −0.0007 (8) |
C12 | 0.0389 (10) | 0.0306 (10) | 0.0382 (10) | 0.0001 (8) | 0.0222 (9) | 0.0004 (8) |
C13 | 0.0598 (14) | 0.0450 (13) | 0.0603 (14) | −0.0013 (11) | 0.0449 (13) | −0.0002 (11) |
C14 | 0.0723 (18) | 0.0462 (14) | 0.0800 (18) | 0.0040 (13) | 0.0603 (16) | −0.0056 (13) |
C15 | 0.0586 (15) | 0.0316 (11) | 0.0690 (16) | 0.0030 (10) | 0.0445 (14) | −0.0046 (10) |
C16 | 0.0500 (12) | 0.0330 (10) | 0.0390 (10) | 0.0001 (9) | 0.0250 (10) | 0.0013 (8) |
C17 | 0.0768 (19) | 0.0403 (13) | 0.0705 (18) | −0.0095 (13) | 0.0473 (16) | 0.0032 (12) |
O11 | 0.0598 (11) | 0.0342 (8) | 0.0701 (12) | 0.0088 (8) | 0.0386 (10) | 0.0034 (8) |
Co1—N1i | 2.0962 (18) | C11—H11 | 0.9300 |
Co1—N1 | 2.0962 (18) | C12—C13 | 1.376 (3) |
Co1—O1i | 2.1202 (15) | C12—C16 | 1.495 (3) |
Co1—O1 | 2.1202 (15) | C13—C14 | 1.384 (4) |
Co1—N11 | 2.1562 (19) | C13—H13 | 0.9300 |
Co1—N11i | 2.1562 (19) | C14—C15 | 1.367 (4) |
Se1—C1 | 1.800 (2) | C14—H14 | 0.9300 |
C1—N1 | 1.146 (3) | C15—H15 | 0.9300 |
O1—H1O | 0.8201 | C16—O11 | 1.214 (3) |
O1—H2O | 0.8200 | C16—C17 | 1.487 (4) |
N11—C11 | 1.336 (3) | C17—H17A | 0.9600 |
N11—C15 | 1.338 (3) | C17—H17B | 0.9600 |
C11—C12 | 1.384 (3) | C17—H17C | 0.9600 |
N1i—Co1—N1 | 180.00 (8) | N11—C11—H11 | 118.6 |
N1i—Co1—O1i | 92.26 (7) | C12—C11—H11 | 118.6 |
N1—Co1—O1i | 87.74 (7) | C13—C12—C11 | 118.7 (2) |
N1i—Co1—O1 | 87.74 (7) | C13—C12—C16 | 122.4 (2) |
N1—Co1—O1 | 92.26 (7) | C11—C12—C16 | 118.9 (2) |
O1i—Co1—O1 | 180.00 (9) | C12—C13—C14 | 118.9 (2) |
N1i—Co1—N11 | 90.77 (7) | C12—C13—H13 | 120.6 |
N1—Co1—N11 | 89.23 (7) | C14—C13—H13 | 120.6 |
O1i—Co1—N11 | 90.43 (7) | C15—C14—C13 | 118.6 (2) |
O1—Co1—N11 | 89.57 (7) | C15—C14—H14 | 120.7 |
N1i—Co1—N11i | 89.23 (7) | C13—C14—H14 | 120.7 |
N1—Co1—N11i | 90.77 (7) | N11—C15—C14 | 123.6 (2) |
O1i—Co1—N11i | 89.57 (7) | N11—C15—H15 | 118.2 |
O1—Co1—N11i | 90.43 (7) | C14—C15—H15 | 118.2 |
N11—Co1—N11i | 180.00 (9) | O11—C16—C17 | 122.3 (2) |
N1—C1—Se1 | 177.1 (2) | O11—C16—C12 | 118.8 (2) |
C1—N1—Co1 | 163.86 (18) | C17—C16—C12 | 118.8 (2) |
Co1—O1—H1O | 112.7 | C16—C17—H17A | 109.5 |
Co1—O1—H2O | 115.2 | C16—C17—H17B | 109.5 |
H1O—O1—H2O | 110.9 | H17A—C17—H17B | 109.5 |
C11—N11—C15 | 117.4 (2) | C16—C17—H17C | 109.5 |
C11—N11—Co1 | 123.37 (15) | H17A—C17—H17C | 109.5 |
C15—N11—Co1 | 119.25 (15) | H17B—C17—H17C | 109.5 |
N11—C11—C12 | 122.9 (2) |
Symmetry code: (i) −x+1, −y+1, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O···O11ii | 0.82 | 1.97 | 2.780 (2) | 169 |
O1—H2O···Se1iii | 0.82 | 2.57 | 3.338 (2) | 157 |
Symmetry codes: (ii) x, y+1, z; (iii) −x+3/2, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Co(NCSe)2(C7H7NO)2(H2O)2] |
Mr | 547.19 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 19.1098 (6), 9.0064 (4), 14.9734 (5) |
β (°) | 128.203 (2) |
V (Å3) | 2025.13 (13) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 4.47 |
Crystal size (mm) | 0.35 × 0.27 × 0.19 |
Data collection | |
Diffractometer | Stoe IPDS2 diffractometer |
Absorption correction | Numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008) |
Tmin, Tmax | 0.240, 0.423 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16689, 2409, 2260 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.658 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.029, 0.066, 1.12 |
No. of reflections | 2409 |
No. of parameters | 125 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.50, −0.45 |
Computer programs: X-AREA (Stoe & Cie, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), XP in SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2011)., publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O···O11i | 0.82 | 1.97 | 2.780 (2) | 169.1 |
O1—H2O···Se1ii | 0.8200 | 2.5700 | 3.338 (2) | 157.00 |
Symmetry codes: (i) x, y+1, z; (ii) −x+3/2, y+1/2, −z+1/2. |
Acknowledgements
We gratefully acknowledge financial support by the DFG (project No. NA 720/3–1) and the State of Schleswig–Holstein. We thank Professor Dr Wolfgang Bensch for access to his experimental facilities.
References
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Recently we have reported on the magnetic properties of 1D coordination polymers based on paramagnetic transition metal cations that are coordinated by pyridine as co-ligand and that are µ-1,3-bridged into chains by thio- or selenocyanato anions (Näther & Greve, 2003). Dependent on the nature of the metal cation, anti- or ferromagnetic ordering is observed and for the compounds with Co(II) as cation we have found a slow relaxation of the magnetization (Boeckmann & Näther 2010, 2011 and 2012). To investigate the influence of the co-ligand on the magnetic properties we tried to prepare similar compounds based on 3-acetylpyridine, which resulted in the formation of the title compound in which the anionic ligands are only terminal N-coordinated. Further investigations also show that this compound cannot be transformed into the corresponding 1D coordination polymers and therefore, it was characterized only by single crystal X-ray diffraction.
In the crystal structure the cobalt(II) cations are coordinated by four nitrogen atoms of two terminal N-bonded selenocyanato anions and two terminal bonded 3-acetylpyridine co-ligands as well as two water molecules into discrete complexes (Fig. 1). The coordination polyhedron of the Co cations can be described as a slightly distorted octahedron with the Co cation located on a centre of inversion. The discrete cobalt complexes are bridged by two pairs of intermolecular O—H···O hydrogen bonding into 16-membered rings that are located on centres of inversion (Fig. 2). These rings are further linked into hydrogen bonded chains that are parallel to the b axis (Fig. 2 and Table 1).