organic compounds
4-(4-Chlorophenyl)-2,6-bis(1H-indol-3-yl)-1,4-dihydropyridine-3,5-dicarbonitrile ethanol monosolvate
aKey Laboratory of Biological Cancer Therapy, Xuzhou Medical College, Xuzhou 221004, People's Republic of China
*Correspondence e-mail: songleizhu@126.com
In the title compound, C29H18ClN5·C2H6O, the dihydropyridine ring adopts a strongly flattened with a maximum deviation of 0.139 (2) Å from its best plane for the Csp3 atom. The dihedral angles between the dihydropyridine ring plane and the two indole rings in positions 2 and 6 are 34.28 (5) and 40.50 (6)°, respectively. In turn, the benzene ring and the dihydropyridine ring are oriented at a dihedral angle of 74.69 (6)°. An intramolecular C—H⋯Cl hydrogen bond occurs. In the crystal, molecules are linked by N—H⋯N, N—H⋯O and O—H⋯N hydrogen bonds into layers parallel to (001). There are short C—H⋯Cl contacts between molecules in neighboring layers.
Related literature
For the biological activity of indole and 1,4-dihydropyridine derivatives, see: da Silva et al. (2001); Joshi & Chand (1982); Janis & Triggle (1983). For the synthesis of a series of bisindoles derivatives of 1,4-dihydropyridine, see: Zhu et al. (2008).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku/MSC, 2001); cell CrystalClear; data reduction: CrystalStructure (Rigaku/MSC, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 and PLATON.
Supporting information
10.1107/S1600536812013906/gk2473sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812013906/gk2473Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812013906/gk2473Isup3.cml
The title compound was prepared by the reaction of 4-chlorobenzaldehyde (1 mmol), 3-cyanoacetyl indole (2 mmol), ammonium acetate (5 mmol) in glycol solvent (3 mL) under microwave irradiation condition. After irradiating for 8 mins at 413 K, the reaction mixture was cooled and washed with small amount of ethanol. The crude product was filtered and single crystals of the title compound were obtained from ethanol solution by slow evaporation at room temperature (yield: 75%, m.p. > 573 K).
H atoms were positioned geometrically, with N-H = 0.88 Å , O-H = 0.84 Å (for OH), and C-H =0.95, 0.98, 0.99, 1.00 Å for aromatic, methyl, methylene, and methyne H, respectively, and constrained to ride on their parent atoms with Uiso(H) = x Ueq(C,N,O), where x = 1.5 for methyl and hydroxyl H, x = 1.2 for all other H atoms.
Data collection: CrystalClear (Rigaku/MSC, 2001); cell
CrystalClear (Rigaku/MSC, 2001); data reduction: CrystalStructure (Rigaku/MSC, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. The solvent ethanol is not shown for clarity. | |
Fig. 2. A packing diagram of the title compound. Hydrogen bonds are shown as dashed lines. |
C29H18ClN5·C2H6O | Z = 2 |
Mr = 518.00 | F(000) = 540 |
Triclinic, P1 | Dx = 1.299 Mg m−3 |
Hall symbol: -P 1 | Melting point > 573 K |
a = 9.2133 (17) Å | Mo Kα radiation, λ = 0.71070 Å |
b = 11.611 (2) Å | Cell parameters from 4662 reflections |
c = 12.473 (2) Å | θ = 3.1–25.3° |
α = 87.714 (7)° | µ = 0.18 mm−1 |
β = 83.297 (6)° | T = 193 K |
γ = 89.576 (7)° | Block, colorless |
V = 1324.1 (4) Å3 | 0.55 × 0.36 × 0.15 mm |
Rigaku Mercury diffractometer | 4803 independent reflections |
Radiation source: fine-focus sealed tube | 4095 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
Detector resolution: 7.31 pixels mm-1 | θmax = 25.4°, θmin = 3.1° |
ω scans | h = −11→10 |
Absorption correction: multi-scan (REQAB; Jacobson, 1998) | k = −13→13 |
Tmin = 0.787, Tmax = 0.974 | l = −14→15 |
12971 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.054 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.119 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0408P)2 + 0.8429P] where P = (Fo2 + 2Fc2)/3 |
4803 reflections | (Δ/σ)max < 0.001 |
346 parameters | Δρmax = 0.67 e Å−3 |
0 restraints | Δρmin = −0.71 e Å−3 |
C29H18ClN5·C2H6O | γ = 89.576 (7)° |
Mr = 518.00 | V = 1324.1 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.2133 (17) Å | Mo Kα radiation |
b = 11.611 (2) Å | µ = 0.18 mm−1 |
c = 12.473 (2) Å | T = 193 K |
α = 87.714 (7)° | 0.55 × 0.36 × 0.15 mm |
β = 83.297 (6)° |
Rigaku Mercury diffractometer | 4803 independent reflections |
Absorption correction: multi-scan (REQAB; Jacobson, 1998) | 4095 reflections with I > 2σ(I) |
Tmin = 0.787, Tmax = 0.974 | Rint = 0.029 |
12971 measured reflections |
R[F2 > 2σ(F2)] = 0.054 | 0 restraints |
wR(F2) = 0.119 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.67 e Å−3 |
4803 reflections | Δρmin = −0.71 e Å−3 |
346 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.31431 (10) | 0.42027 (6) | 0.66333 (5) | 0.0645 (3) | |
O1 | 0.16731 (15) | 0.06664 (12) | 0.79527 (12) | 0.0305 (4) | |
H1 | 0.0989 | 0.0202 | 0.7909 | 0.046* | |
N1 | 0.59953 (18) | 0.07570 (14) | 0.14897 (14) | 0.0249 (4) | |
H1A | 0.6694 | 0.0235 | 0.1421 | 0.030* | |
N2 | 0.46514 (19) | −0.27027 (14) | 0.14306 (15) | 0.0308 (4) | |
H2 | 0.4969 | −0.3323 | 0.1092 | 0.037* | |
N3 | 0.0789 (2) | 0.06862 (17) | 0.21675 (19) | 0.0442 (5) | |
N4 | 0.5715 (2) | 0.48918 (15) | 0.10560 (15) | 0.0324 (4) | |
N5 | 0.98636 (19) | 0.19122 (16) | −0.04096 (15) | 0.0325 (4) | |
H5 | 1.0473 | 0.1647 | −0.0940 | 0.039* | |
C1 | 0.4581 (2) | 0.03934 (17) | 0.17981 (16) | 0.0233 (4) | |
C2 | 0.3512 (2) | 0.12010 (17) | 0.20019 (16) | 0.0240 (4) | |
C3 | 0.3834 (2) | 0.24738 (16) | 0.21036 (16) | 0.0231 (4) | |
H3 | 0.3113 | 0.2925 | 0.1715 | 0.028* | |
C4 | 0.5345 (2) | 0.27287 (16) | 0.15183 (16) | 0.0219 (4) | |
C5 | 0.6369 (2) | 0.19035 (16) | 0.12830 (16) | 0.0223 (4) | |
C6 | 0.4366 (2) | −0.08497 (17) | 0.18466 (16) | 0.0245 (4) | |
C7 | 0.5099 (2) | −0.16103 (17) | 0.11543 (18) | 0.0281 (5) | |
H7 | 0.5813 | −0.1400 | 0.0569 | 0.034* | |
C8 | 0.3627 (2) | −0.26903 (18) | 0.23208 (18) | 0.0294 (5) | |
C9 | 0.2898 (3) | −0.36089 (19) | 0.2901 (2) | 0.0384 (6) | |
H9 | 0.3053 | −0.4381 | 0.2688 | 0.046* | |
C10 | 0.1950 (3) | −0.3353 (2) | 0.3789 (2) | 0.0458 (6) | |
H10 | 0.1423 | −0.3959 | 0.4191 | 0.055* | |
C11 | 0.1741 (3) | −0.2218 (2) | 0.4119 (2) | 0.0439 (6) | |
H11 | 0.1090 | −0.2072 | 0.4748 | 0.053* | |
C12 | 0.2463 (2) | −0.13097 (19) | 0.35472 (19) | 0.0346 (5) | |
H12 | 0.2318 | −0.0544 | 0.3779 | 0.041* | |
C13 | 0.3412 (2) | −0.15357 (17) | 0.26201 (17) | 0.0269 (5) | |
C14 | 0.2016 (2) | 0.08876 (17) | 0.21017 (18) | 0.0295 (5) | |
C15 | 0.3656 (2) | 0.28430 (16) | 0.32702 (16) | 0.0243 (4) | |
C16 | 0.2305 (2) | 0.32231 (19) | 0.37341 (19) | 0.0342 (5) | |
H16 | 0.1487 | 0.3211 | 0.3336 | 0.041* | |
C17 | 0.2140 (3) | 0.3620 (2) | 0.4777 (2) | 0.0427 (6) | |
H17 | 0.1211 | 0.3875 | 0.5094 | 0.051* | |
C18 | 0.3327 (3) | 0.3643 (2) | 0.53466 (19) | 0.0400 (6) | |
C19 | 0.4659 (3) | 0.3244 (2) | 0.4922 (2) | 0.0463 (6) | |
H19 | 0.5465 | 0.3240 | 0.5332 | 0.056* | |
C20 | 0.4817 (2) | 0.2842 (2) | 0.38802 (19) | 0.0372 (6) | |
H20 | 0.5741 | 0.2562 | 0.3581 | 0.045* | |
C21 | 0.5614 (2) | 0.39169 (18) | 0.12352 (16) | 0.0247 (4) | |
C22 | 0.7857 (2) | 0.20992 (17) | 0.07727 (16) | 0.0239 (4) | |
C23 | 0.8523 (2) | 0.14721 (18) | −0.00612 (18) | 0.0302 (5) | |
H23 | 0.8105 | 0.0825 | −0.0351 | 0.036* | |
C24 | 1.0120 (2) | 0.28385 (17) | 0.01974 (17) | 0.0276 (5) | |
C25 | 1.1329 (2) | 0.35680 (19) | 0.01216 (19) | 0.0339 (5) | |
H25 | 1.2139 | 0.3477 | −0.0414 | 0.041* | |
C26 | 1.1297 (2) | 0.4423 (2) | 0.0853 (2) | 0.0371 (6) | |
H26 | 1.2094 | 0.4943 | 0.0814 | 0.045* | |
C27 | 1.0116 (2) | 0.45460 (19) | 0.16554 (19) | 0.0343 (5) | |
H27 | 1.0144 | 0.5130 | 0.2164 | 0.041* | |
C28 | 0.8913 (2) | 0.38358 (18) | 0.17213 (18) | 0.0293 (5) | |
H28 | 0.8118 | 0.3927 | 0.2269 | 0.035* | |
C29 | 0.8885 (2) | 0.29768 (17) | 0.09657 (16) | 0.0244 (4) | |
C30 | 0.2484 (5) | 0.0453 (3) | 0.6042 (3) | 0.0876 (12) | |
H30A | 0.3331 | −0.0004 | 0.6213 | 0.131* | |
H30B | 0.2738 | 0.0898 | 0.5363 | 0.131* | |
H30C | 0.1667 | −0.0063 | 0.5967 | 0.131* | |
C31 | 0.2053 (3) | 0.1251 (2) | 0.6923 (2) | 0.0435 (6) | |
H31A | 0.2872 | 0.1784 | 0.6978 | 0.052* | |
H31B | 0.1207 | 0.1718 | 0.6739 | 0.052* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.1068 (6) | 0.0464 (4) | 0.0364 (4) | −0.0072 (4) | 0.0148 (4) | −0.0185 (3) |
O1 | 0.0256 (8) | 0.0288 (8) | 0.0366 (9) | −0.0044 (6) | −0.0005 (7) | −0.0018 (7) |
N1 | 0.0224 (9) | 0.0175 (9) | 0.0338 (10) | −0.0003 (7) | 0.0010 (7) | −0.0021 (7) |
N2 | 0.0369 (10) | 0.0176 (9) | 0.0376 (11) | −0.0010 (8) | 0.0001 (9) | −0.0083 (8) |
N3 | 0.0285 (11) | 0.0335 (11) | 0.0708 (16) | −0.0054 (9) | −0.0083 (10) | 0.0016 (10) |
N4 | 0.0356 (10) | 0.0219 (10) | 0.0391 (11) | −0.0013 (8) | −0.0014 (8) | −0.0011 (8) |
N5 | 0.0287 (10) | 0.0360 (11) | 0.0306 (10) | 0.0005 (8) | 0.0078 (8) | −0.0060 (8) |
C1 | 0.0253 (10) | 0.0214 (10) | 0.0237 (10) | −0.0029 (8) | −0.0040 (8) | −0.0024 (8) |
C2 | 0.0240 (10) | 0.0215 (10) | 0.0267 (11) | −0.0020 (8) | −0.0025 (8) | −0.0025 (8) |
C3 | 0.0218 (10) | 0.0193 (10) | 0.0282 (11) | −0.0003 (8) | −0.0036 (8) | −0.0001 (8) |
C4 | 0.0247 (10) | 0.0189 (10) | 0.0220 (10) | −0.0023 (8) | −0.0014 (8) | −0.0029 (8) |
C5 | 0.0244 (10) | 0.0199 (10) | 0.0227 (10) | −0.0029 (8) | −0.0027 (8) | −0.0027 (8) |
C6 | 0.0268 (10) | 0.0193 (10) | 0.0277 (11) | −0.0022 (8) | −0.0045 (9) | −0.0021 (8) |
C7 | 0.0293 (11) | 0.0233 (11) | 0.0316 (12) | −0.0028 (9) | −0.0024 (9) | −0.0026 (9) |
C8 | 0.0276 (11) | 0.0226 (11) | 0.0381 (13) | −0.0037 (9) | −0.0041 (10) | −0.0030 (9) |
C9 | 0.0397 (13) | 0.0215 (11) | 0.0533 (16) | −0.0061 (10) | −0.0037 (12) | 0.0010 (10) |
C10 | 0.0396 (14) | 0.0317 (13) | 0.0630 (18) | −0.0080 (11) | 0.0043 (13) | 0.0099 (12) |
C11 | 0.0400 (14) | 0.0406 (14) | 0.0467 (15) | −0.0004 (11) | 0.0108 (12) | 0.0053 (12) |
C12 | 0.0372 (12) | 0.0260 (12) | 0.0390 (13) | −0.0005 (10) | 0.0027 (10) | −0.0035 (10) |
C13 | 0.0272 (11) | 0.0217 (11) | 0.0321 (12) | −0.0019 (8) | −0.0046 (9) | −0.0016 (9) |
C14 | 0.0303 (12) | 0.0194 (11) | 0.0391 (13) | −0.0004 (9) | −0.0044 (10) | −0.0032 (9) |
C15 | 0.0277 (11) | 0.0155 (10) | 0.0285 (11) | −0.0008 (8) | 0.0024 (9) | −0.0019 (8) |
C16 | 0.0304 (12) | 0.0340 (13) | 0.0360 (13) | 0.0044 (10) | 0.0045 (10) | 0.0002 (10) |
C17 | 0.0460 (15) | 0.0339 (13) | 0.0423 (15) | 0.0102 (11) | 0.0186 (12) | 0.0003 (11) |
C18 | 0.0579 (16) | 0.0286 (12) | 0.0306 (13) | −0.0058 (11) | 0.0100 (12) | −0.0087 (10) |
C19 | 0.0477 (15) | 0.0599 (17) | 0.0325 (14) | −0.0078 (13) | −0.0061 (12) | −0.0122 (12) |
C20 | 0.0297 (12) | 0.0491 (15) | 0.0331 (13) | 0.0028 (10) | −0.0023 (10) | −0.0109 (11) |
C21 | 0.0250 (11) | 0.0252 (12) | 0.0237 (11) | −0.0005 (9) | −0.0009 (9) | −0.0037 (8) |
C22 | 0.0256 (10) | 0.0198 (10) | 0.0253 (11) | 0.0000 (8) | 0.0011 (9) | −0.0007 (8) |
C23 | 0.0290 (11) | 0.0269 (11) | 0.0342 (12) | −0.0029 (9) | 0.0007 (10) | −0.0055 (9) |
C24 | 0.0270 (11) | 0.0253 (11) | 0.0295 (12) | 0.0003 (9) | −0.0018 (9) | 0.0061 (9) |
C25 | 0.0246 (11) | 0.0359 (13) | 0.0396 (13) | −0.0017 (10) | −0.0013 (10) | 0.0118 (10) |
C26 | 0.0295 (12) | 0.0320 (13) | 0.0513 (15) | −0.0088 (10) | −0.0139 (11) | 0.0101 (11) |
C27 | 0.0373 (13) | 0.0265 (12) | 0.0417 (14) | −0.0033 (10) | −0.0153 (11) | −0.0006 (10) |
C28 | 0.0298 (11) | 0.0260 (11) | 0.0329 (12) | −0.0004 (9) | −0.0063 (10) | −0.0027 (9) |
C29 | 0.0259 (11) | 0.0210 (10) | 0.0261 (11) | 0.0006 (8) | −0.0037 (9) | 0.0033 (8) |
C30 | 0.141 (4) | 0.076 (2) | 0.0404 (18) | −0.016 (2) | 0.015 (2) | −0.0096 (16) |
C31 | 0.0500 (15) | 0.0415 (14) | 0.0389 (14) | −0.0043 (12) | −0.0071 (12) | 0.0063 (11) |
Cl1—C18 | 1.745 (2) | C11—C12 | 1.380 (3) |
O1—C31 | 1.435 (3) | C11—H11 | 0.9500 |
O1—H1 | 0.8400 | C12—C13 | 1.398 (3) |
N1—C1 | 1.379 (3) | C12—H12 | 0.9500 |
N1—C5 | 1.384 (2) | C15—C20 | 1.383 (3) |
N1—H1A | 0.8800 | C15—C16 | 1.387 (3) |
N2—C7 | 1.355 (3) | C16—C17 | 1.388 (3) |
N2—C8 | 1.371 (3) | C16—H16 | 0.9500 |
N2—H2 | 0.8800 | C17—C18 | 1.374 (4) |
N3—C14 | 1.148 (3) | C17—H17 | 0.9500 |
N4—C21 | 1.147 (3) | C18—C19 | 1.364 (4) |
N5—C23 | 1.357 (3) | C19—C20 | 1.389 (3) |
N5—C24 | 1.377 (3) | C19—H19 | 0.9500 |
N5—H5 | 0.8800 | C20—H20 | 0.9500 |
C1—C2 | 1.364 (3) | C22—C23 | 1.376 (3) |
C1—C6 | 1.456 (3) | C22—C29 | 1.443 (3) |
C2—C14 | 1.418 (3) | C23—H23 | 0.9500 |
C2—C3 | 1.523 (3) | C24—C25 | 1.396 (3) |
C3—C4 | 1.520 (3) | C24—C29 | 1.412 (3) |
C3—C15 | 1.523 (3) | C25—C26 | 1.373 (3) |
C3—H3 | 1.0000 | C25—H25 | 0.9500 |
C4—C5 | 1.356 (3) | C26—C27 | 1.400 (3) |
C4—C21 | 1.427 (3) | C26—H26 | 0.9500 |
C5—C22 | 1.457 (3) | C27—C28 | 1.379 (3) |
C6—C7 | 1.377 (3) | C27—H27 | 0.9500 |
C6—C13 | 1.445 (3) | C28—C29 | 1.402 (3) |
C7—H7 | 0.9500 | C28—H28 | 0.9500 |
C8—C9 | 1.396 (3) | C30—C31 | 1.483 (4) |
C8—C13 | 1.412 (3) | C30—H30A | 0.9800 |
C9—C10 | 1.369 (4) | C30—H30B | 0.9800 |
C9—H9 | 0.9500 | C30—H30C | 0.9800 |
C10—C11 | 1.401 (4) | C31—H31A | 0.9900 |
C10—H10 | 0.9500 | C31—H31B | 0.9900 |
C31—O1—H1 | 109.5 | C20—C15—C3 | 121.96 (18) |
C1—N1—C5 | 123.19 (16) | C16—C15—C3 | 119.59 (19) |
C1—N1—H1A | 118.4 | C15—C16—C17 | 120.4 (2) |
C5—N1—H1A | 118.4 | C15—C16—H16 | 119.8 |
C7—N2—C8 | 109.32 (17) | C17—C16—H16 | 119.8 |
C7—N2—H2 | 125.3 | C18—C17—C16 | 119.6 (2) |
C8—N2—H2 | 125.3 | C18—C17—H17 | 120.2 |
C23—N5—C24 | 109.29 (17) | C16—C17—H17 | 120.2 |
C23—N5—H5 | 125.4 | C19—C18—C17 | 121.2 (2) |
C24—N5—H5 | 125.4 | C19—C18—Cl1 | 119.1 (2) |
C2—C1—N1 | 118.81 (18) | C17—C18—Cl1 | 119.73 (19) |
C2—C1—C6 | 125.68 (18) | C18—C19—C20 | 119.0 (2) |
N1—C1—C6 | 115.49 (17) | C18—C19—H19 | 120.5 |
C1—C2—C14 | 120.68 (18) | C20—C19—H19 | 120.5 |
C1—C2—C3 | 122.97 (17) | C15—C20—C19 | 121.4 (2) |
C14—C2—C3 | 116.33 (17) | C15—C20—H20 | 119.3 |
C4—C3—C2 | 108.33 (16) | C19—C20—H20 | 119.3 |
C4—C3—C15 | 113.00 (16) | N4—C21—C4 | 174.1 (2) |
C2—C3—C15 | 112.95 (16) | C23—C22—C29 | 106.34 (17) |
C4—C3—H3 | 107.4 | C23—C22—C5 | 124.24 (18) |
C2—C3—H3 | 107.4 | C29—C22—C5 | 129.35 (18) |
C15—C3—H3 | 107.4 | N5—C23—C22 | 110.18 (18) |
C5—C4—C21 | 122.03 (18) | N5—C23—H23 | 124.9 |
C5—C4—C3 | 123.36 (17) | C22—C23—H23 | 124.9 |
C21—C4—C3 | 114.61 (17) | N5—C24—C25 | 129.8 (2) |
C4—C5—N1 | 119.10 (17) | N5—C24—C29 | 107.72 (18) |
C4—C5—C22 | 125.91 (18) | C25—C24—C29 | 122.5 (2) |
N1—C5—C22 | 114.93 (17) | C26—C25—C24 | 117.2 (2) |
C7—C6—C13 | 106.43 (17) | C26—C25—H25 | 121.4 |
C7—C6—C1 | 125.15 (19) | C24—C25—H25 | 121.4 |
C13—C6—C1 | 128.39 (18) | C25—C26—C27 | 121.5 (2) |
N2—C7—C6 | 110.08 (19) | C25—C26—H26 | 119.3 |
N2—C7—H7 | 125.0 | C27—C26—H26 | 119.3 |
C6—C7—H7 | 125.0 | C28—C27—C26 | 121.3 (2) |
N2—C8—C9 | 129.4 (2) | C28—C27—H27 | 119.3 |
N2—C8—C13 | 108.17 (18) | C26—C27—H27 | 119.3 |
C9—C8—C13 | 122.4 (2) | C27—C28—C29 | 118.8 (2) |
C10—C9—C8 | 117.3 (2) | C27—C28—H28 | 120.6 |
C10—C9—H9 | 121.3 | C29—C28—H28 | 120.6 |
C8—C9—H9 | 121.3 | C28—C29—C24 | 118.59 (19) |
C9—C10—C11 | 121.5 (2) | C28—C29—C22 | 134.93 (19) |
C9—C10—H10 | 119.2 | C24—C29—C22 | 106.45 (17) |
C11—C10—H10 | 119.2 | C31—C30—H30A | 109.5 |
C12—C11—C10 | 121.1 (2) | C31—C30—H30B | 109.5 |
C12—C11—H11 | 119.4 | H30A—C30—H30B | 109.5 |
C10—C11—H11 | 119.4 | C31—C30—H30C | 109.5 |
C11—C12—C13 | 118.9 (2) | H30A—C30—H30C | 109.5 |
C11—C12—H12 | 120.6 | H30B—C30—H30C | 109.5 |
C13—C12—H12 | 120.6 | O1—C31—C30 | 113.1 (2) |
C12—C13—C8 | 118.70 (19) | O1—C31—H31A | 109.0 |
C12—C13—C6 | 135.23 (19) | C30—C31—H31A | 109.0 |
C8—C13—C6 | 105.99 (18) | O1—C31—H31B | 109.0 |
N3—C14—C2 | 176.8 (2) | C30—C31—H31B | 109.0 |
C20—C15—C16 | 118.4 (2) | H31A—C31—H31B | 107.8 |
C5—N1—C1—C2 | −5.9 (3) | C1—C6—C13—C12 | −2.5 (4) |
C5—N1—C1—C6 | 172.47 (17) | C7—C6—C13—C8 | −0.9 (2) |
N1—C1—C2—C14 | 166.92 (19) | C1—C6—C13—C8 | −179.07 (19) |
C6—C1—C2—C14 | −11.3 (3) | C4—C3—C15—C20 | −30.7 (3) |
N1—C1—C2—C3 | −11.3 (3) | C2—C3—C15—C20 | 92.7 (2) |
C6—C1—C2—C3 | 170.48 (18) | C4—C3—C15—C16 | 147.46 (19) |
C1—C2—C3—C4 | 22.5 (3) | C2—C3—C15—C16 | −89.1 (2) |
C14—C2—C3—C4 | −155.86 (18) | C20—C15—C16—C17 | 1.7 (3) |
C1—C2—C3—C15 | −103.5 (2) | C3—C15—C16—C17 | −176.58 (19) |
C14—C2—C3—C15 | 78.2 (2) | C15—C16—C17—C18 | 0.4 (3) |
C2—C3—C4—C5 | −19.9 (3) | C16—C17—C18—C19 | −2.4 (4) |
C15—C3—C4—C5 | 106.0 (2) | C16—C17—C18—Cl1 | 177.11 (18) |
C2—C3—C4—C21 | 160.43 (17) | C17—C18—C19—C20 | 2.1 (4) |
C15—C3—C4—C21 | −73.6 (2) | Cl1—C18—C19—C20 | −177.4 (2) |
C21—C4—C5—N1 | −174.08 (18) | C16—C15—C20—C19 | −1.9 (3) |
C3—C4—C5—N1 | 6.3 (3) | C3—C15—C20—C19 | 176.2 (2) |
C21—C4—C5—C22 | 2.9 (3) | C18—C19—C20—C15 | 0.1 (4) |
C3—C4—C5—C22 | −176.79 (18) | C4—C5—C22—C23 | −134.1 (2) |
C1—N1—C5—C4 | 8.5 (3) | N1—C5—C22—C23 | 43.0 (3) |
C1—N1—C5—C22 | −168.82 (18) | C4—C5—C22—C29 | 42.3 (3) |
C2—C1—C6—C7 | 142.7 (2) | N1—C5—C22—C29 | −140.6 (2) |
N1—C1—C6—C7 | −35.6 (3) | C24—N5—C23—C22 | 0.6 (3) |
C2—C1—C6—C13 | −39.5 (3) | C29—C22—C23—N5 | −1.4 (2) |
N1—C1—C6—C13 | 142.3 (2) | C5—C22—C23—N5 | 175.73 (19) |
C8—N2—C7—C6 | −0.8 (2) | C23—N5—C24—C25 | −178.7 (2) |
C13—C6—C7—N2 | 1.1 (2) | C23—N5—C24—C29 | 0.4 (2) |
C1—C6—C7—N2 | 179.30 (18) | N5—C24—C25—C26 | −179.1 (2) |
C7—N2—C8—C9 | −178.1 (2) | C29—C24—C25—C26 | 1.9 (3) |
C7—N2—C8—C13 | 0.2 (2) | C24—C25—C26—C27 | 1.2 (3) |
N2—C8—C9—C10 | 178.0 (2) | C25—C26—C27—C28 | −2.1 (3) |
C13—C8—C9—C10 | −0.2 (3) | C26—C27—C28—C29 | 0.0 (3) |
C8—C9—C10—C11 | −1.3 (4) | C27—C28—C29—C24 | 2.9 (3) |
C9—C10—C11—C12 | 1.3 (4) | C27—C28—C29—C22 | −179.7 (2) |
C10—C11—C12—C13 | 0.3 (4) | N5—C24—C29—C28 | 176.82 (18) |
C11—C12—C13—C8 | −1.8 (3) | C25—C24—C29—C28 | −3.9 (3) |
C11—C12—C13—C6 | −177.9 (2) | N5—C24—C29—C22 | −1.2 (2) |
N2—C8—C13—C12 | −176.76 (19) | C25—C24—C29—C22 | 177.99 (19) |
C9—C8—C13—C12 | 1.7 (3) | C23—C22—C29—C28 | −176.0 (2) |
N2—C8—C13—C6 | 0.5 (2) | C5—C22—C29—C28 | 7.1 (4) |
C9—C8—C13—C6 | 178.9 (2) | C23—C22—C29—C24 | 1.6 (2) |
C7—C6—C13—C12 | 175.6 (2) | C5—C22—C29—C24 | −175.3 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
C31—H31A···Cl1 | 0.99 | 2.83 | 3.571 (3) | 132 |
C28—H28···Cl1i | 0.95 | 2.79 | 3.520 (2) | 135 |
N5—H5···O1ii | 0.88 | 2.04 | 2.907 (2) | 167 |
N2—H2···N4iii | 0.88 | 2.18 | 2.989 (2) | 153 |
N1—H1A···O1iv | 0.88 | 2.04 | 2.834 (2) | 150 |
O1—H1···N3v | 0.84 | 1.96 | 2.791 (2) | 172 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x+1, y, z−1; (iii) x, y−1, z; (iv) −x+1, −y, −z+1; (v) −x, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C29H18ClN5·C2H6O |
Mr | 518.00 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 193 |
a, b, c (Å) | 9.2133 (17), 11.611 (2), 12.473 (2) |
α, β, γ (°) | 87.714 (7), 83.297 (6), 89.576 (7) |
V (Å3) | 1324.1 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.18 |
Crystal size (mm) | 0.55 × 0.36 × 0.15 |
Data collection | |
Diffractometer | Rigaku Mercury diffractometer |
Absorption correction | Multi-scan (REQAB; Jacobson, 1998) |
Tmin, Tmax | 0.787, 0.974 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12971, 4803, 4095 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.602 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.054, 0.119, 1.09 |
No. of reflections | 4803 |
No. of parameters | 346 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.67, −0.71 |
Computer programs: CrystalClear (Rigaku/MSC, 2001), CrystalStructure (Rigaku/MSC, 2004), SHELXS97 (Sheldrick, 2008), ORTEPII (Johnson, 1976) and PLATON (Spek, 2009), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C31—H31A···Cl1 | 0.99 | 2.83 | 3.571 (3) | 132 |
C28—H28···Cl1i | 0.95 | 2.79 | 3.520 (2) | 135 |
N5—H5···O1ii | 0.88 | 2.04 | 2.907 (2) | 167 |
N2—H2···N4iii | 0.88 | 2.18 | 2.989 (2) | 153 |
N1—H1A···O1iv | 0.88 | 2.04 | 2.834 (2) | 150 |
O1—H1···N3v | 0.84 | 1.96 | 2.791 (2) | 172 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x+1, y, z−1; (iii) x, y−1, z; (iv) −x+1, −y, −z+1; (v) −x, −y, −z+1. |
Acknowledgements
This work was partially supported by the Open Foundation of the Key Laboratory of Cancer Biotherapy of Xuzhou Medical College (grant No. C0901), the Key Laboratory of Organic Synthesis of Jiangsu Province (grant No. KJS1010), the Natural Science Foundation of Higher Education Institutions of Jiangsu Province (grant No. 09KJB150012) and the Special Presidential Foundation of Xuzhou Medical College (grant Nos. 09KJZ19 and 2010KJZ20).
References
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Johnson, C. K. (1976). ORTEPII. Report ORNL-5138. Oak Ridge National Laboratory, Tennessee, USA. Google Scholar
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Indole fragments are important moieties of a large number of natural products and medicinal agents (da Silva et al., 2001). Compounds carrying the indole moiety exhibit antibacterial and fungicidal activities (Joshi & Chand, 1982). In addition, 1,4-dihydropyridine compounds are a well-known classe of calcium channel modulators for the treatment of cardiovascular diseases, for example Nifedipin, Felodipin are clinically useful as vasodilators and antihypertensive agents (Janis & Triggle, 1983). Due to the potent and diverse biological activities of indole and 1,4-dihydropyridine derivatives, we investigated a simple and efficient protocol for synthesis of a series of bisindoles derivatives containing 1,4-dihydropyridine units (Zhu et al., 2008). Herein, we report the crystal structure of the title compound.
In the title molecule (Fig. 1), atoms of the newly formed 1,4-dihydropyridine ring A (N1, C1-C5) are nearly planar, with the maximum deviation of 0.139 (2) Å. The dihedral angles between ring A with attached two indole rings B (N2, C6-C13) and C (N5, C22-C29) are 34.28 (5) and 40.50 (6)°, respectively. Ring A and the benzene ring D (C15-C20) are oriented at a dihedral angle of 74.69 (6)°.
In the crystal, intermolecular N-H···N, N-H···O and O-H···N hydrogen bonds link the molecules into layers parallel to (0 0 1) (Table 1, Fig. 2). There are short C-H···Cl contacts between the molecules from neighboring layers.