organic compounds
Ethyl 7-oxo-3,5-diphenyl-1,4-diazepane-2-carboxylate
aDepartment of Physics, Dr MGR Educational and Research Institute, Dr MGR University, Chennai 600 095, India, bDepartment of Physics, RKM Vivekananda College (Autonomous), Chennai 600 004, India, and cOrganic Chemistry Division, Central Leather Research Institute, Adyar, Chennai 600 020, India
*Correspondence e-mail: ksethusankar@yahoo.co.in
The title compound, C20H22N2O3, crystallizes with two independent molecules in the In both molecules, the diazepane rings adopt chair conformations. The mean planes of the diazepane rings in the two molecules form dihedral angles of 71.6 (4)/40.3 (5) and 75.9 (5)/58.6 (7)° with the neighbouring benzene rings. The carbonyl-group O atoms deviate significantly from the diazepane rings, by 0.685 (14) and 0.498 (13) Å. The ethoxycarbonyl groups show conformational difference between two molecules, as reflected in the orientation of the carbonyl O atoms and the C—C—O—C torsion angle of −179.0 (2)° in one molecule and 73.2 (2)° in the other. In one molecule there is a short N—H⋯O contact that generates an S(5) ring motif. In the crystal, N—H⋯O interactions generate R22(8) graph-set motifs and C—H⋯O interactions generate R22(10) and R22(14) graph-set motifs. C—H⋯π interactions also occur.
Related literature
For the biological importance of diazepanes, see: Wlodarczyk et al. (2005); Gopalakrishnan et al. (2007). For a related structure, see: Kumar et al. (2009). For puckering parameters, see: Cremer & Pople (1975). For graph-set notation, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2008); cell SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536812017084/pv2527sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812017084/pv2527Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812017084/pv2527Isup3.cml
In a typical reaction, powdered ethyl 4-oxo-2,6-diphenyl piperidine- 3-carboxylate hydrochloride (2 g) was dissolved in an ice cold conc. H2SO4 (10 ml) in chloroform (5 ml) placed in a conical flask equipped with a magnetic stirrer. After the complete dissolution, the temperature of the solution was brought to 298 K. Sodium azide (600 mg) was added in portions over a period of 20 minutes with vigorous stirring. After the addition was over, the solution was poured slowly on to crushed ice with vigorous stirring, and the PH was adjusted to 8.0 using 4 N sodium hydroxide and extracted with chloroform. The combined organic layer was dried over sodium sulfate and evaporated to get the crude product which was purified by recrystallization from benzene and ethanol (1:1) to afford colourless prisms of the title compound.
The Hydrogen atoms were placed in calculated positions with C–H = 0.93 to 0.97 Å and N–H = 0.83 (2) to 0.85 (2) Å refined in the riding model with fixed isotropic displacement parameters: Uiso(H) = 1.5 Ueq(C) for methyl group and Uiso(H) = 1.2 Ueq(C/N) for other groups.
Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. Molecule 1 of the title compound. Displacement ellipsoids are drawn at the 30% probability level. | |
Fig. 2. Molecule 2 of the title compound. Displacement ellipsoids are drawn at the 30% probability level. | |
Fig. 3. Molecule 1(Black) and Molecule 2 (Red) of the title compound overlapping each other, H atoms are shown as spheres of arbitrary radius. | |
Fig. 4. The crystal packing of the title compound viewed down the c axis, showing hydrogen bonds resulting in S(5) ring motif, dimers R22(8), R22(10) and R22(14) graphset motifs; H-atoms not involved in hydrogen bonds have been excluded for clarity. |
C20H22N2O3 | Z = 4 |
Mr = 338.40 | F(000) = 720 |
Triclinic, P1 | Dx = 1.260 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.5352 (3) Å | Cell parameters from 9437 reflections |
b = 14.8809 (4) Å | θ = 1.5–29.1° |
c = 15.0800 (4) Å | µ = 0.09 mm−1 |
α = 61.650 (1)° | T = 293 K |
β = 82.153 (2)° | Block, colourless |
γ = 71.344 (2)° | 0.30 × 0.30 × 0.25 mm |
V = 1783.86 (9) Å3 |
Bruker Kappa APEXII CCD diffractometer | 9437 independent reflections |
Radiation source: fine-focus sealed tube | 6221 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.032 |
ω and ϕ scan | θmax = 29.1°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | h = −12→12 |
Tmin = 0.975, Tmax = 0.979 | k = −20→20 |
39936 measured reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.181 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.15 | w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3 |
9437 reflections | (Δ/σ)max = 0.001 |
465 parameters | Δρmax = 0.30 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
C20H22N2O3 | γ = 71.344 (2)° |
Mr = 338.40 | V = 1783.86 (9) Å3 |
Triclinic, P1 | Z = 4 |
a = 9.5352 (3) Å | Mo Kα radiation |
b = 14.8809 (4) Å | µ = 0.09 mm−1 |
c = 15.0800 (4) Å | T = 293 K |
α = 61.650 (1)° | 0.30 × 0.30 × 0.25 mm |
β = 82.153 (2)° |
Bruker Kappa APEXII CCD diffractometer | 9437 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | 6221 reflections with I > 2σ(I) |
Tmin = 0.975, Tmax = 0.979 | Rint = 0.032 |
39936 measured reflections |
R[F2 > 2σ(F2)] = 0.052 | 0 restraints |
wR(F2) = 0.181 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.15 | Δρmax = 0.30 e Å−3 |
9437 reflections | Δρmin = −0.29 e Å−3 |
465 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.47991 (14) | −0.06939 (10) | 0.20798 (8) | 0.0525 (3) | |
O2 | 0.59115 (16) | 0.04761 (10) | 0.09211 (8) | 0.0624 (4) | |
O3 | 0.49513 (15) | 0.29409 (9) | 0.22928 (9) | 0.0569 (3) | |
N1 | 0.74551 (15) | −0.04002 (10) | 0.39917 (9) | 0.0407 (3) | |
H1 | 0.833 (2) | −0.0769 (15) | 0.4161 (13) | 0.049* | |
N2 | 0.53465 (15) | 0.14336 (10) | 0.21778 (9) | 0.0409 (3) | |
H2 | 0.5204 (19) | 0.1802 (14) | 0.1547 (14) | 0.049* | |
C1 | 0.3938 (4) | −0.1898 (2) | 0.1853 (2) | 0.1086 (10) | |
H1A | 0.4398 | −0.2441 | 0.2491 | 0.163* | |
H1B | 0.3960 | −0.2216 | 0.1425 | 0.163* | |
H1C | 0.2930 | −0.1564 | 0.1954 | 0.163* | |
C2 | 0.4739 (3) | −0.10988 (17) | 0.13802 (15) | 0.0668 (6) | |
H2A | 0.5734 | −0.1417 | 0.1220 | 0.080* | |
H2B | 0.4237 | −0.0519 | 0.0760 | 0.080* | |
C3 | 0.54711 (18) | 0.00514 (12) | 0.17573 (11) | 0.0422 (4) | |
C4 | 0.56892 (16) | 0.02807 (11) | 0.25989 (10) | 0.0365 (3) | |
H4 | 0.5006 | 0.0025 | 0.3144 | 0.044* | |
C5 | 0.73055 (17) | −0.03196 (11) | 0.30013 (10) | 0.0375 (3) | |
H5 | 0.7964 | 0.0074 | 0.2531 | 0.045* | |
C6 | 0.77658 (17) | −0.14315 (12) | 0.31021 (11) | 0.0416 (4) | |
C7 | 0.7214 (2) | −0.22217 (14) | 0.38552 (13) | 0.0564 (5) | |
H7 | 0.6597 | −0.2083 | 0.4337 | 0.068* | |
C8 | 0.7573 (3) | −0.32131 (15) | 0.38941 (15) | 0.0744 (6) | |
H8 | 0.7205 | −0.3741 | 0.4408 | 0.089* | |
C9 | 0.8465 (3) | −0.34294 (16) | 0.31860 (17) | 0.0778 (7) | |
H9 | 0.8687 | −0.4097 | 0.3210 | 0.093* | |
C10 | 0.9023 (2) | −0.26639 (17) | 0.24476 (16) | 0.0714 (6) | |
H10 | 0.9636 | −0.2811 | 0.1968 | 0.086* | |
C11 | 0.8689 (2) | −0.16731 (15) | 0.24034 (13) | 0.0552 (5) | |
H11 | 0.9088 | −0.1159 | 0.1898 | 0.066* | |
C12 | 0.73176 (16) | 0.05855 (11) | 0.40290 (10) | 0.0364 (3) | |
H12 | 0.7962 | 0.0961 | 0.3522 | 0.044* | |
C13 | 0.78172 (16) | 0.03114 (12) | 0.50683 (10) | 0.0373 (3) | |
C14 | 0.79566 (18) | −0.06809 (13) | 0.58854 (11) | 0.0456 (4) | |
H14 | 0.7732 | −0.1204 | 0.5809 | 0.055* | |
C15 | 0.8426 (2) | −0.09052 (15) | 0.68171 (12) | 0.0549 (5) | |
H15 | 0.8518 | −0.1578 | 0.7360 | 0.066* | |
C16 | 0.8757 (2) | −0.01420 (16) | 0.69434 (12) | 0.0571 (5) | |
H16 | 0.9076 | −0.0295 | 0.7569 | 0.069* | |
C17 | 0.8614 (2) | 0.08413 (16) | 0.61463 (13) | 0.0594 (5) | |
H17 | 0.8825 | 0.1364 | 0.6231 | 0.071* | |
C18 | 0.8156 (2) | 0.10706 (14) | 0.52086 (12) | 0.0516 (4) | |
H18 | 0.8075 | 0.1743 | 0.4668 | 0.062* | |
C19 | 0.57133 (17) | 0.13165 (12) | 0.38076 (10) | 0.0397 (3) | |
H19A | 0.5049 | 0.0881 | 0.4144 | 0.048* | |
H19B | 0.5567 | 0.1803 | 0.4092 | 0.048* | |
C20 | 0.53007 (16) | 0.19611 (12) | 0.26997 (10) | 0.0386 (3) | |
O4 | 0.31252 (12) | 0.53774 (10) | 1.14341 (8) | 0.0493 (3) | |
O5 | 0.07097 (13) | 0.55078 (10) | 1.15916 (8) | 0.0552 (3) | |
O6 | 0.46013 (13) | 0.30348 (9) | 0.99326 (8) | 0.0525 (3) | |
N3 | 0.16447 (14) | 0.63277 (10) | 0.83956 (9) | 0.0405 (3) | |
H3 | 0.1599 (19) | 0.6944 (15) | 0.7926 (14) | 0.049* | |
N4 | 0.32947 (14) | 0.43294 (10) | 1.03308 (9) | 0.0411 (3) | |
H4A | 0.3836 (19) | 0.3987 (14) | 1.0864 (13) | 0.049* | |
C21 | 0.2862 (3) | 0.4781 (2) | 1.32355 (16) | 0.0918 (8) | |
H21A | 0.3543 | 0.4117 | 1.3302 | 0.138* | |
H21B | 0.1867 | 0.4742 | 1.3285 | 0.138* | |
H21C | 0.3055 | 0.4917 | 1.3762 | 0.138* | |
C22 | 0.3050 (2) | 0.56515 (18) | 1.22498 (14) | 0.0647 (5) | |
H22A | 0.2227 | 0.6287 | 1.2121 | 0.078* | |
H22B | 0.3952 | 0.5813 | 1.2267 | 0.078* | |
C23 | 0.18582 (17) | 0.53656 (12) | 1.11706 (11) | 0.0395 (3) | |
C24 | 0.20218 (16) | 0.52322 (11) | 1.02292 (10) | 0.0355 (3) | |
H24 | 0.1137 | 0.5073 | 1.0154 | 0.043* | |
C25 | 0.20763 (16) | 0.63003 (11) | 0.93032 (10) | 0.0356 (3) | |
H25 | 0.3083 | 0.6362 | 0.9232 | 0.043* | |
C26 | 0.10097 (16) | 0.72316 (11) | 0.94280 (10) | 0.0365 (3) | |
C27 | 0.15310 (19) | 0.78986 (13) | 0.96197 (11) | 0.0451 (4) | |
H27 | 0.2544 | 0.7797 | 0.9635 | 0.054* | |
C28 | 0.0547 (2) | 0.87075 (14) | 0.97860 (13) | 0.0557 (5) | |
H28 | 0.0902 | 0.9156 | 0.9903 | 0.067* | |
C29 | −0.0951 (2) | 0.88640 (14) | 0.97817 (13) | 0.0571 (5) | |
H29 | −0.1602 | 0.9409 | 0.9904 | 0.069* | |
C30 | −0.14881 (19) | 0.82081 (14) | 0.95948 (12) | 0.0506 (4) | |
H30 | −0.2501 | 0.8307 | 0.9591 | 0.061* | |
C31 | −0.05059 (17) | 0.74068 (12) | 0.94139 (11) | 0.0421 (4) | |
H31 | −0.0869 | 0.6973 | 0.9279 | 0.050* | |
C32 | 0.26852 (17) | 0.56031 (12) | 0.80412 (10) | 0.0378 (3) | |
H32 | 0.3678 | 0.5678 | 0.8009 | 0.045* | |
C33 | 0.21848 (18) | 0.59202 (12) | 0.69885 (10) | 0.0417 (4) | |
C34 | 0.0713 (2) | 0.63035 (13) | 0.67137 (12) | 0.0505 (4) | |
H34 | −0.0005 | 0.6397 | 0.7171 | 0.061* | |
C35 | 0.0286 (2) | 0.65530 (15) | 0.57568 (14) | 0.0651 (6) | |
H35 | −0.0714 | 0.6814 | 0.5582 | 0.078* | |
C36 | 0.1311 (3) | 0.64200 (16) | 0.50766 (15) | 0.0734 (6) | |
H36 | 0.1019 | 0.6588 | 0.4439 | 0.088* | |
C37 | 0.2760 (3) | 0.6040 (2) | 0.53387 (15) | 0.0824 (7) | |
H37 | 0.3472 | 0.5945 | 0.4879 | 0.099* | |
C38 | 0.3196 (2) | 0.57900 (18) | 0.62977 (14) | 0.0691 (6) | |
H38 | 0.4199 | 0.5529 | 0.6467 | 0.083* | |
C39 | 0.27301 (17) | 0.44403 (11) | 0.87378 (10) | 0.0390 (3) | |
H39A | 0.1720 | 0.4414 | 0.8905 | 0.047* | |
H39B | 0.3131 | 0.4036 | 0.8365 | 0.047* | |
C40 | 0.36168 (16) | 0.38832 (11) | 0.97132 (11) | 0.0378 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0665 (8) | 0.0548 (7) | 0.0509 (6) | −0.0214 (6) | −0.0054 (5) | −0.0318 (6) |
O2 | 0.1019 (10) | 0.0526 (8) | 0.0345 (6) | −0.0243 (7) | −0.0070 (6) | −0.0182 (5) |
O3 | 0.0821 (9) | 0.0307 (6) | 0.0520 (6) | −0.0023 (6) | −0.0264 (6) | −0.0162 (5) |
N1 | 0.0499 (8) | 0.0327 (7) | 0.0367 (6) | 0.0007 (6) | −0.0144 (5) | −0.0178 (5) |
N2 | 0.0556 (8) | 0.0297 (6) | 0.0313 (6) | −0.0030 (6) | −0.0119 (5) | −0.0119 (5) |
C1 | 0.164 (3) | 0.109 (2) | 0.107 (2) | −0.079 (2) | 0.0090 (19) | −0.0683 (18) |
C2 | 0.0872 (14) | 0.0718 (13) | 0.0651 (11) | −0.0244 (11) | −0.0112 (10) | −0.0460 (11) |
C3 | 0.0520 (9) | 0.0344 (8) | 0.0383 (8) | −0.0021 (7) | −0.0133 (7) | −0.0182 (6) |
C4 | 0.0466 (8) | 0.0300 (7) | 0.0321 (6) | −0.0068 (6) | −0.0058 (6) | −0.0148 (6) |
C5 | 0.0448 (8) | 0.0333 (8) | 0.0322 (6) | −0.0049 (6) | −0.0059 (6) | −0.0158 (6) |
C6 | 0.0503 (9) | 0.0333 (8) | 0.0366 (7) | 0.0014 (7) | −0.0124 (6) | −0.0177 (6) |
C7 | 0.0824 (13) | 0.0420 (10) | 0.0433 (8) | −0.0139 (9) | −0.0050 (8) | −0.0195 (8) |
C8 | 0.1198 (19) | 0.0369 (10) | 0.0579 (11) | −0.0176 (11) | −0.0180 (12) | −0.0135 (9) |
C9 | 0.1173 (19) | 0.0424 (11) | 0.0682 (13) | 0.0069 (12) | −0.0304 (13) | −0.0318 (11) |
C10 | 0.0825 (14) | 0.0554 (13) | 0.0681 (12) | 0.0154 (11) | −0.0139 (11) | −0.0404 (11) |
C11 | 0.0606 (11) | 0.0472 (10) | 0.0508 (9) | 0.0030 (8) | −0.0065 (8) | −0.0270 (8) |
C12 | 0.0437 (8) | 0.0336 (8) | 0.0296 (6) | −0.0073 (6) | −0.0062 (6) | −0.0133 (6) |
C13 | 0.0389 (8) | 0.0399 (8) | 0.0318 (6) | −0.0070 (6) | −0.0048 (5) | −0.0169 (6) |
C14 | 0.0535 (9) | 0.0424 (9) | 0.0381 (7) | −0.0110 (7) | −0.0083 (7) | −0.0159 (7) |
C15 | 0.0673 (11) | 0.0535 (11) | 0.0351 (7) | −0.0152 (9) | −0.0103 (7) | −0.0121 (7) |
C16 | 0.0647 (11) | 0.0714 (12) | 0.0373 (8) | −0.0169 (9) | −0.0089 (7) | −0.0259 (8) |
C17 | 0.0796 (13) | 0.0655 (12) | 0.0489 (9) | −0.0297 (10) | −0.0047 (9) | −0.0319 (9) |
C18 | 0.0729 (11) | 0.0462 (10) | 0.0401 (8) | −0.0219 (9) | −0.0068 (7) | −0.0185 (7) |
C19 | 0.0473 (8) | 0.0349 (8) | 0.0345 (7) | −0.0031 (6) | −0.0063 (6) | −0.0178 (6) |
C20 | 0.0433 (8) | 0.0310 (8) | 0.0377 (7) | −0.0040 (6) | −0.0089 (6) | −0.0147 (6) |
O4 | 0.0457 (6) | 0.0578 (7) | 0.0484 (6) | −0.0068 (5) | −0.0069 (5) | −0.0307 (5) |
O5 | 0.0463 (7) | 0.0703 (9) | 0.0469 (6) | −0.0138 (6) | 0.0031 (5) | −0.0278 (6) |
O6 | 0.0574 (7) | 0.0369 (6) | 0.0519 (6) | 0.0084 (5) | −0.0180 (5) | −0.0208 (5) |
N3 | 0.0532 (8) | 0.0281 (6) | 0.0330 (6) | −0.0011 (6) | −0.0095 (5) | −0.0127 (5) |
N4 | 0.0457 (7) | 0.0334 (7) | 0.0376 (6) | 0.0016 (5) | −0.0151 (5) | −0.0153 (5) |
C21 | 0.0918 (17) | 0.138 (2) | 0.0565 (12) | −0.0486 (17) | −0.0013 (11) | −0.0430 (14) |
C22 | 0.0572 (11) | 0.0839 (15) | 0.0658 (11) | −0.0121 (10) | −0.0084 (9) | −0.0473 (11) |
C23 | 0.0407 (8) | 0.0339 (8) | 0.0371 (7) | −0.0056 (6) | −0.0057 (6) | −0.0125 (6) |
C24 | 0.0371 (7) | 0.0298 (7) | 0.0365 (7) | −0.0056 (6) | −0.0067 (6) | −0.0135 (6) |
C25 | 0.0392 (8) | 0.0317 (7) | 0.0345 (7) | −0.0078 (6) | −0.0035 (6) | −0.0147 (6) |
C26 | 0.0438 (8) | 0.0291 (7) | 0.0308 (6) | −0.0078 (6) | −0.0028 (6) | −0.0102 (5) |
C27 | 0.0544 (9) | 0.0379 (9) | 0.0448 (8) | −0.0139 (7) | −0.0019 (7) | −0.0195 (7) |
C28 | 0.0743 (12) | 0.0413 (10) | 0.0583 (10) | −0.0139 (9) | −0.0057 (9) | −0.0283 (8) |
C29 | 0.0729 (13) | 0.0411 (10) | 0.0493 (9) | 0.0018 (9) | −0.0049 (8) | −0.0246 (8) |
C30 | 0.0484 (9) | 0.0466 (10) | 0.0437 (8) | −0.0005 (8) | −0.0059 (7) | −0.0172 (7) |
C31 | 0.0480 (9) | 0.0337 (8) | 0.0390 (7) | −0.0067 (7) | −0.0072 (6) | −0.0136 (6) |
C32 | 0.0421 (8) | 0.0361 (8) | 0.0343 (7) | −0.0079 (6) | −0.0061 (6) | −0.0159 (6) |
C33 | 0.0562 (9) | 0.0323 (8) | 0.0337 (7) | −0.0094 (7) | −0.0066 (6) | −0.0132 (6) |
C34 | 0.0594 (10) | 0.0439 (9) | 0.0428 (8) | −0.0152 (8) | −0.0127 (7) | −0.0122 (7) |
C35 | 0.0842 (14) | 0.0527 (11) | 0.0542 (10) | −0.0224 (10) | −0.0298 (10) | −0.0119 (9) |
C36 | 0.1207 (19) | 0.0562 (12) | 0.0440 (9) | −0.0227 (12) | −0.0246 (11) | −0.0188 (9) |
C37 | 0.1040 (18) | 0.0973 (18) | 0.0479 (10) | −0.0151 (14) | −0.0004 (11) | −0.0434 (11) |
C38 | 0.0660 (12) | 0.0847 (15) | 0.0489 (10) | −0.0016 (10) | −0.0067 (9) | −0.0354 (10) |
C39 | 0.0456 (8) | 0.0322 (8) | 0.0383 (7) | −0.0038 (6) | −0.0110 (6) | −0.0172 (6) |
C40 | 0.0409 (8) | 0.0299 (7) | 0.0386 (7) | −0.0064 (6) | −0.0070 (6) | −0.0131 (6) |
O1—C3 | 1.317 (2) | O4—C23 | 1.3300 (18) |
O1—C2 | 1.4566 (19) | O4—C22 | 1.456 (2) |
O2—C3 | 1.1976 (19) | O5—C23 | 1.1986 (19) |
O3—C20 | 1.2283 (18) | O6—C40 | 1.2306 (17) |
N1—C12 | 1.4578 (19) | N3—C25 | 1.4609 (17) |
N1—C5 | 1.4637 (16) | N3—C32 | 1.467 (2) |
N1—H1 | 0.83 (2) | N3—H3 | 0.84 (2) |
N2—C20 | 1.3389 (19) | N4—C40 | 1.3347 (19) |
N2—C4 | 1.4550 (18) | N4—C24 | 1.4538 (18) |
N2—H2 | 0.85 (2) | N4—H4A | 0.85 (2) |
C1—C2 | 1.461 (3) | C21—C22 | 1.472 (3) |
C1—H1A | 0.9600 | C21—H21A | 0.9600 |
C1—H1B | 0.9600 | C21—H21B | 0.9600 |
C1—H1C | 0.9600 | C21—H21C | 0.9600 |
C2—H2A | 0.9700 | C22—H22A | 0.9700 |
C2—H2B | 0.9700 | C22—H22B | 0.9700 |
C3—C4 | 1.5163 (19) | C23—C24 | 1.506 (2) |
C4—C5 | 1.5496 (19) | C24—C25 | 1.551 (2) |
C4—H4 | 0.9800 | C24—H24 | 0.9800 |
C5—C6 | 1.506 (2) | C25—C26 | 1.511 (2) |
C5—H5 | 0.9800 | C25—H25 | 0.9800 |
C6—C7 | 1.384 (2) | C26—C31 | 1.385 (2) |
C6—C11 | 1.385 (2) | C26—C27 | 1.394 (2) |
C7—C8 | 1.377 (3) | C27—C28 | 1.376 (2) |
C7—H7 | 0.9300 | C27—H27 | 0.9300 |
C8—C9 | 1.368 (3) | C28—C29 | 1.372 (3) |
C8—H8 | 0.9300 | C28—H28 | 0.9300 |
C9—C10 | 1.357 (3) | C29—C30 | 1.384 (3) |
C9—H9 | 0.9300 | C29—H29 | 0.9300 |
C10—C11 | 1.375 (3) | C30—C31 | 1.378 (2) |
C10—H10 | 0.9300 | C30—H30 | 0.9300 |
C11—H11 | 0.9300 | C31—H31 | 0.9300 |
C12—C13 | 1.5239 (17) | C32—C33 | 1.5236 (18) |
C12—C19 | 1.538 (2) | C32—C39 | 1.529 (2) |
C12—H12 | 0.9800 | C32—H32 | 0.9800 |
C13—C18 | 1.380 (2) | C33—C38 | 1.360 (3) |
C13—C14 | 1.381 (2) | C33—C34 | 1.375 (2) |
C14—C15 | 1.3845 (19) | C34—C35 | 1.393 (2) |
C14—H14 | 0.9300 | C34—H34 | 0.9300 |
C15—C16 | 1.370 (3) | C35—C36 | 1.357 (3) |
C15—H15 | 0.9300 | C35—H35 | 0.9300 |
C16—C17 | 1.361 (3) | C36—C37 | 1.350 (3) |
C16—H16 | 0.9300 | C36—H36 | 0.9300 |
C17—C18 | 1.386 (2) | C37—C38 | 1.399 (2) |
C17—H17 | 0.9300 | C37—H37 | 0.9300 |
C18—H18 | 0.9300 | C38—H38 | 0.9300 |
C19—C20 | 1.5107 (18) | C39—C40 | 1.5162 (17) |
C19—H19A | 0.9700 | C39—H39A | 0.9700 |
C19—H19B | 0.9700 | C39—H39B | 0.9700 |
C3—O1—C2 | 115.98 (14) | C23—O4—C22 | 116.14 (13) |
C12—N1—C5 | 117.12 (11) | C25—N3—C32 | 116.90 (11) |
C12—N1—H1 | 105.4 (12) | C25—N3—H3 | 106.1 (12) |
C5—N1—H1 | 103.2 (12) | C32—N3—H3 | 104.6 (12) |
C20—N2—C4 | 125.40 (12) | C40—N4—C24 | 125.62 (11) |
C20—N2—H2 | 116.9 (12) | C40—N4—H4A | 114.4 (12) |
C4—N2—H2 | 117.7 (12) | C24—N4—H4A | 119.4 (12) |
C2—C1—H1A | 109.5 | C22—C21—H21A | 109.5 |
C2—C1—H1B | 109.5 | C22—C21—H21B | 109.5 |
H1A—C1—H1B | 109.5 | H21A—C21—H21B | 109.5 |
C2—C1—H1C | 109.5 | C22—C21—H21C | 109.5 |
H1A—C1—H1C | 109.5 | H21A—C21—H21C | 109.5 |
H1B—C1—H1C | 109.5 | H21B—C21—H21C | 109.5 |
O1—C2—C1 | 108.45 (18) | O4—C22—C21 | 112.10 (18) |
O1—C2—H2A | 110.0 | O4—C22—H22A | 109.2 |
C1—C2—H2A | 110.0 | C21—C22—H22A | 109.2 |
O1—C2—H2B | 110.0 | O4—C22—H22B | 109.2 |
C1—C2—H2B | 110.0 | C21—C22—H22B | 109.2 |
H2A—C2—H2B | 108.4 | H22A—C22—H22B | 107.9 |
O2—C3—O1 | 125.40 (14) | O5—C23—O4 | 124.41 (14) |
O2—C3—C4 | 123.26 (15) | O5—C23—C24 | 124.07 (13) |
O1—C3—C4 | 111.28 (13) | O4—C23—C24 | 111.37 (13) |
N2—C4—C3 | 107.04 (11) | N4—C24—C23 | 110.14 (11) |
N2—C4—C5 | 112.95 (12) | N4—C24—C25 | 113.96 (12) |
C3—C4—C5 | 108.33 (12) | C23—C24—C25 | 109.29 (12) |
N2—C4—H4 | 109.5 | N4—C24—H24 | 107.7 |
C3—C4—H4 | 109.5 | C23—C24—H24 | 107.7 |
C5—C4—H4 | 109.5 | C25—C24—H24 | 107.7 |
N1—C5—C6 | 108.35 (11) | N3—C25—C26 | 108.37 (11) |
N1—C5—C4 | 110.42 (12) | N3—C25—C24 | 109.46 (11) |
C6—C5—C4 | 110.90 (12) | C26—C25—C24 | 110.26 (12) |
N1—C5—H5 | 109.0 | N3—C25—H25 | 109.6 |
C6—C5—H5 | 109.0 | C26—C25—H25 | 109.6 |
C4—C5—H5 | 109.0 | C24—C25—H25 | 109.6 |
C7—C6—C11 | 118.05 (16) | C31—C26—C27 | 118.31 (14) |
C7—C6—C5 | 121.24 (15) | C31—C26—C25 | 120.95 (13) |
C11—C6—C5 | 120.60 (15) | C27—C26—C25 | 120.63 (13) |
C8—C7—C6 | 120.29 (19) | C28—C27—C26 | 119.95 (16) |
C8—C7—H7 | 119.9 | C28—C27—H27 | 120.0 |
C6—C7—H7 | 119.9 | C26—C27—H27 | 120.0 |
C9—C8—C7 | 120.7 (2) | C29—C28—C27 | 121.13 (17) |
C9—C8—H8 | 119.6 | C29—C28—H28 | 119.4 |
C7—C8—H8 | 119.6 | C27—C28—H28 | 119.4 |
C10—C9—C8 | 119.57 (19) | C28—C29—C30 | 119.71 (16) |
C10—C9—H9 | 120.2 | C28—C29—H29 | 120.1 |
C8—C9—H9 | 120.2 | C30—C29—H29 | 120.1 |
C9—C10—C11 | 120.5 (2) | C31—C30—C29 | 119.30 (16) |
C9—C10—H10 | 119.8 | C31—C30—H30 | 120.4 |
C11—C10—H10 | 119.8 | C29—C30—H30 | 120.4 |
C10—C11—C6 | 120.86 (19) | C30—C31—C26 | 121.60 (15) |
C10—C11—H11 | 119.6 | C30—C31—H31 | 119.2 |
C6—C11—H11 | 119.6 | C26—C31—H31 | 119.2 |
N1—C12—C13 | 109.03 (11) | N3—C32—C33 | 108.08 (11) |
N1—C12—C19 | 111.03 (12) | N3—C32—C39 | 111.54 (13) |
C13—C12—C19 | 110.09 (11) | C33—C32—C39 | 109.35 (11) |
N1—C12—H12 | 108.9 | N3—C32—H32 | 109.3 |
C13—C12—H12 | 108.9 | C33—C32—H32 | 109.3 |
C19—C12—H12 | 108.9 | C39—C32—H32 | 109.3 |
C18—C13—C14 | 118.12 (13) | C38—C33—C34 | 117.67 (14) |
C18—C13—C12 | 119.56 (13) | C38—C33—C32 | 120.40 (14) |
C14—C13—C12 | 122.33 (13) | C34—C33—C32 | 121.88 (14) |
C13—C14—C15 | 120.77 (15) | C33—C34—C35 | 120.62 (18) |
C13—C14—H14 | 119.6 | C33—C34—H34 | 119.7 |
C15—C14—H14 | 119.6 | C35—C34—H34 | 119.7 |
C16—C15—C14 | 120.35 (16) | C36—C35—C34 | 120.89 (19) |
C16—C15—H15 | 119.8 | C36—C35—H35 | 119.6 |
C14—C15—H15 | 119.8 | C34—C35—H35 | 119.6 |
C17—C16—C15 | 119.46 (15) | C37—C36—C35 | 119.06 (17) |
C17—C16—H16 | 120.3 | C37—C36—H36 | 120.5 |
C15—C16—H16 | 120.3 | C35—C36—H36 | 120.5 |
C16—C17—C18 | 120.59 (16) | C36—C37—C38 | 120.3 (2) |
C16—C17—H17 | 119.7 | C36—C37—H37 | 119.8 |
C18—C17—H17 | 119.7 | C38—C37—H37 | 119.8 |
C13—C18—C17 | 120.70 (15) | C33—C38—C37 | 121.42 (19) |
C13—C18—H18 | 119.7 | C33—C38—H38 | 119.3 |
C17—C18—H18 | 119.7 | C37—C38—H38 | 119.3 |
C20—C19—C12 | 114.10 (12) | C40—C39—C32 | 116.77 (12) |
C20—C19—H19A | 108.7 | C40—C39—H39A | 108.1 |
C12—C19—H19A | 108.7 | C32—C39—H39A | 108.1 |
C20—C19—H19B | 108.7 | C40—C39—H39B | 108.1 |
C12—C19—H19B | 108.7 | C32—C39—H39B | 108.1 |
H19A—C19—H19B | 107.6 | H39A—C39—H39B | 107.3 |
O3—C20—N2 | 121.37 (13) | O6—C40—N4 | 120.90 (12) |
O3—C20—C19 | 120.51 (13) | O6—C40—C39 | 120.65 (13) |
N2—C20—C19 | 118.12 (13) | N4—C40—C39 | 118.44 (13) |
Cg1 and Cg2 are the centroids of the C33–C38 and C26–C31 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O2 | 0.85 (2) | 2.45 (2) | 2.776 (2) | 104 |
N2—H2···O6i | 0.85 (2) | 2.26 (2) | 3.091 (1) | 170 |
N4—H4A···O3ii | 0.85 (2) | 2.14 (2) | 2.983 (1) | 169 |
C2—H2B···O2iii | 0.97 | 2.53 | 3.233 (2) | 130 |
C39—H39A···O5iv | 0.97 | 2.48 | 3.355 (2) | 150 |
C9—H9···Cg1v | 0.93 | 2.89 | 3.735 (3) | 152 |
C16—H16···Cg2vi | 0.93 | 2.91 | 3.712 (1) | 146 |
Symmetry codes: (i) x, y, z−1; (ii) x, y, z+1; (iii) −x+1, −y, −z; (iv) −x, −y+1, −z+2; (v) −x+1, −y, −z+1; (vi) x+1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C20H22N2O3 |
Mr | 338.40 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 9.5352 (3), 14.8809 (4), 15.0800 (4) |
α, β, γ (°) | 61.650 (1), 82.153 (2), 71.344 (2) |
V (Å3) | 1783.86 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.30 × 0.30 × 0.25 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2008) |
Tmin, Tmax | 0.975, 0.979 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 39936, 9437, 6221 |
Rint | 0.032 |
(sin θ/λ)max (Å−1) | 0.684 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.181, 1.15 |
No. of reflections | 9437 |
No. of parameters | 465 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.30, −0.29 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg1 and Cg2 are the centroids of the C33–C38 and C26–C31 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O2 | 0.85 (2) | 2.45 (2) | 2.776 (2) | 104 |
N2—H2···O6i | 0.85 (2) | 2.26 (2) | 3.091 (1) | 170 |
N4—H4A···O3ii | 0.85 (2) | 2.14 (2) | 2.983 (1) | 169 |
C2—H2B···O2iii | 0.97 | 2.53 | 3.233 (2) | 130 |
C39—H39A···O5iv | 0.97 | 2.48 | 3.355 (2) | 150 |
C9—H9···Cg1v | 0.93 | 2.89 | 3.735 (3) | 152 |
C16—H16···Cg2vi | 0.93 | 2.91 | 3.712 (1) | 146 |
Symmetry codes: (i) x, y, z−1; (ii) x, y, z+1; (iii) −x+1, −y, −z; (iv) −x, −y+1, −z+2; (v) −x+1, −y, −z+1; (vi) x+1, y−1, z. |
Acknowledgements
GJ and KS thank Dr Babu Varghese, SAIF, IIT, Chennai, India, for the
data collection and Dr V. Murugan, Head of the Department of Physics, RKM Vivekananda College, Chennai, India, for providing facilities in the department to carry out this work.References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound belongs to an important class of heterocyclic compounds that have widespread applications from pharmaceuticals (Wlodarczyk et al., 2005) to biology (Gopalakrishnan et al., 2007).
In the title structure there are two crystallographically independent molecules (1 and 2) in an asymmetric unit (Fig. 1 and Fig. 2, respectively). The central diazepane rings (C4/C5/C12/C19/C20/N1/N2) and (C24/C25/C32/C39/C40/N3/N4) in the molecule 1 and 2 form dihedral angles of 71.6 (4)°, 40.3 (5)° and 75.9 (5)°, 58.6 (7)° with the neighbouring benzene rings (C6–C11), (C13–C18) and (C26–C31), (C33–C38), respectively. The dihedral angles between the pairs of benzene rings (C6–C11), (C13–C18) and (C26–C31), (C33–C38) are 54.8 (7)° and 58.4 (6)°, respectively. The sum of the bond angles around the atoms N2 (362°) and N4 (359.8°) of the diazepane rings indicate sp2 hybridization, whereas the other N atoms, [N1 (328.6°) and N3 (331.2°)] indicate sp3 hybridization.
The atoms O3 and O6 deviate by 0.685 (14) Å and 0.498 (13) Å from the least square plane of the diazepane rings (C4/C5/C12/C19/C20/N1/N2) and (C24/C25/C32/C39/C40/N3/N4), respectively. The ethyl carboxylate groups exhibit significant conformational difference between the two molecules as reflected by the orientation of the carbonyl O-atoms and the torsion angles of C1—C2—O1—C3 is -179.0 (2)° for molecule 1 and C21—C22—O4—C23 is 73.2 (2)° in molecule 2. The conformational differences in the two molecules of the asymmetric unit of the title compound are evident in Fig. 3.
The diazepane rings (C4/C5/C12/C19/C20/N1/N2) and (C24/C25/C32/C39/C40/N3/N4) adopt chair conformations with puckering parameters (Cremer & Pople, 1975) Q2 = 0.382 (2) Å, Q3 = 0.678 (2) Å, ϕ2 = 180.4 (2)°, ϕ3 = 359.71 (14)° and Q2 = 0.333 (2) Å, Q3 = 0.670 (2) Å, ϕ2 = 182.9 (3)°, ϕ3 = 2.44 (14)°, respectively. The title compound exhibits structural similarities with another reported structure (Kumar et al., 2009).
The crystal packing is stabilized by intramolecular N–H···O, intermolecular N–H···O, C–H···O and C–H···π interactions (Table 1). The N2–H2···O2, N2–H2···O6i, N2–H4A···O3ii, C2–H2B···O2iii and C39–H39B···O5iv hydrogen bonds generates S(5) ring motif, dimers R22(8), R22(10) and R22(14) graphset motifs, respectively (Bernstein, et al., 1995). The crystal packing is further stabilized by C9—H9···Cg1v and C16—H16···Cg2vi interactions where Cg1 is center of gravity of (C33–C38) ring and Cg2 is center of gravity of (C26–C31) ring (Fig. 4; symmetry codes are given in Table 1)