organic compounds
2-Hydroxyanilinium 3,5-dinitrobenzoate
aNational First-Class Key Discipline for Traditional Chinese Medicine of Nanjing University of Chinese Medicine, Nanjing 210046, People's Republic of China
*Correspondence e-mail: qzhaonucm@gmail.com
In the title molecular salt, C6H8NO+·C7H3N2O6−, which crystallizes in the chiral monoclinic P21, the achiral components assemble by three different N—H⋯O, one O—H⋯O and one C—H⋯O hydrogen bonds into two-stranded chains running parallel to [010]. The dihedral angles between the carboxy group and the two nitro groups and the mean plane of their attached benzene ring are 24.5 (9), 6.1 (6) and 13.0 (1)°, respectively..
Related literature
For background to supramolecular structures and hydrogen bonding, see: Burrows (2004); Desiraju (2002); Steiner (2002). For related structures, see: Wang et al. (2008).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812014973/qk2032sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812014973/qk2032Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812014973/qk2032Isup4.cdx
Supporting information file. DOI: 10.1107/S1600536812014973/qk2032Isup4.cml
The title compound was obtained by room temperature evaporation of a methanol solution containing 2-aminophenol and 3,5-dinitrobenzoic acid in stoichiometric 1:1 amounts.
All H atoms were placed in calculated positions with C—H = 0.93 Å, O—H = 0.82 Å, and N—H = 0.89 Å, and were refined as riding with Uiso(H) = 1.2Ueq(C) and Uiso(H) = 1.5Ueq(N or O). and refined in riding mode. Owing to insignifant δf" set to zero.
effects the could not be determined and the 1429 Friedel pairs were merged in the final with allData collection: CrystalClear (Rigaku, 2005); cell
CrystalClear (Rigaku, 2005); data reduction: CrystalClear (Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C6H8NO+·C7H3N2O6− | F(000) = 332 |
Mr = 321.25 | Dx = 1.532 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2yb | Cell parameters from 7134 reflections |
a = 9.4988 (19) Å | θ = 27.5–3.4° |
b = 6.0803 (12) Å | µ = 0.13 mm−1 |
c = 12.109 (2) Å | T = 297 K |
β = 95.21 (3)° | Block, colorless |
V = 696.5 (2) Å3 | 0.35 × 0.22 × 0.20 mm |
Z = 2 |
Rigaku Mercury2 diffractometer | 1733 independent reflections |
Radiation source: fine-focus sealed tube | 1209 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.098 |
Detector resolution: 8.366 pixels mm-1 | θmax = 27.5°, θmin = 3.4° |
ω and ϕ scans | h = −12→12 |
Absorption correction: multi-scan (CystalClear; Rigaku, 2005) | k = −7→7 |
Tmin = 0.967, Tmax = 0.975 | l = −15→15 |
7134 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.084 | H-atom parameters constrained |
wR(F2) = 0.218 | w = 1/[\s2(Fo2) + (0.0791P)2 + 1.2502P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
1733 reflections | Δρmax = 0.38 e Å−3 |
210 parameters | Δρmin = −0.28 e Å−3 |
1 restraint | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2\l3/sin(2\q)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.072 (14) |
C6H8NO+·C7H3N2O6− | V = 696.5 (2) Å3 |
Mr = 321.25 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 9.4988 (19) Å | µ = 0.13 mm−1 |
b = 6.0803 (12) Å | T = 297 K |
c = 12.109 (2) Å | 0.35 × 0.22 × 0.20 mm |
β = 95.21 (3)° |
Rigaku Mercury2 diffractometer | 1733 independent reflections |
Absorption correction: multi-scan (CystalClear; Rigaku, 2005) | 1209 reflections with I > 2σ(I) |
Tmin = 0.967, Tmax = 0.975 | Rint = 0.098 |
7134 measured reflections |
R[F2 > 2σ(F2)] = 0.084 | 1 restraint |
wR(F2) = 0.218 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.38 e Å−3 |
1733 reflections | Δρmin = −0.28 e Å−3 |
210 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.3248 (7) | 0.2505 (12) | −0.2268 (6) | 0.0325 (16) | |
C2 | 0.2992 (7) | 0.1113 (12) | −0.1273 (6) | 0.0314 (16) | |
C3 | 0.2233 (7) | −0.0841 (11) | −0.1380 (5) | 0.0294 (15) | |
H1 | 0.1912 | −0.1357 | −0.2082 | 0.035* | |
C4 | 0.1951 (8) | −0.2021 (12) | −0.0450 (6) | 0.0323 (16) | |
C5 | 0.2459 (8) | −0.1379 (13) | 0.0596 (6) | 0.0349 (16) | |
H2 | 0.2290 | −0.2195 | 0.1220 | 0.042* | |
C6 | 0.3243 (7) | 0.0559 (13) | 0.0675 (5) | 0.0320 (16) | |
C7 | 0.3495 (7) | 0.1844 (12) | −0.0223 (5) | 0.0309 (15) | |
H3 | 0.3988 | 0.3162 | −0.0129 | 0.037* | |
N1 | 0.1063 (7) | −0.3963 (12) | −0.0578 (6) | 0.0427 (16) | |
O1 | 0.3190 (6) | 0.1545 (8) | −0.3201 (4) | 0.0413 (14) | |
O2 | 0.3450 (7) | 0.4499 (9) | −0.2114 (5) | 0.0498 (15) | |
O3 | 0.0399 (7) | −0.4290 (12) | −0.1476 (5) | 0.0618 (19) | |
O4 | 0.1028 (7) | −0.5164 (11) | 0.0228 (6) | 0.0597 (18) | |
N2 | 0.3724 (7) | 0.1352 (13) | 0.1794 (5) | 0.0453 (18) | |
O5 | 0.4282 (7) | 0.3173 (11) | 0.1871 (5) | 0.0571 (17) | |
O6 | 0.3546 (8) | 0.0204 (12) | 0.2592 (4) | 0.063 (2) | |
C8 | 0.2779 (8) | 0.4903 (13) | 0.4615 (6) | 0.0352 (17) | |
C9 | 0.1846 (9) | 0.4540 (16) | 0.3689 (6) | 0.047 (2) | |
H4 | 0.1890 | 0.3219 | 0.3306 | 0.056* | |
C10 | 0.0863 (9) | 0.6070 (18) | 0.3322 (7) | 0.054 (2) | |
H5 | 0.0272 | 0.5818 | 0.2679 | 0.064* | |
C11 | 0.0747 (9) | 0.8013 (17) | 0.3917 (7) | 0.051 (2) | |
H6 | 0.0045 | 0.9026 | 0.3691 | 0.062* | |
C12 | 0.1687 (8) | 0.8452 (15) | 0.4857 (6) | 0.0425 (18) | |
H7 | 0.1630 | 0.9760 | 0.5248 | 0.051* | |
C13 | 0.2689 (7) | 0.6899 (13) | 0.5182 (6) | 0.0326 (15) | |
O7 | 0.3797 (6) | 0.3374 (10) | 0.4957 (4) | 0.0444 (14) | |
H8 | 0.3601 | 0.2810 | 0.5539 | 0.067* | |
N3 | 0.3724 (6) | 0.7298 (10) | 0.6120 (5) | 0.0339 (14) | |
H9 | 0.3537 | 0.8575 | 0.6435 | 0.051* | |
H10 | 0.4585 | 0.7345 | 0.5887 | 0.051* | |
H11 | 0.3683 | 0.6219 | 0.6613 | 0.051* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.032 (4) | 0.029 (4) | 0.037 (4) | 0.002 (3) | 0.003 (3) | 0.002 (3) |
C2 | 0.033 (4) | 0.030 (4) | 0.032 (4) | 0.001 (3) | 0.007 (3) | −0.001 (3) |
C3 | 0.032 (4) | 0.029 (4) | 0.028 (3) | −0.001 (3) | 0.004 (3) | −0.003 (3) |
C4 | 0.030 (4) | 0.026 (4) | 0.043 (4) | 0.002 (3) | 0.011 (3) | 0.000 (3) |
C5 | 0.037 (4) | 0.034 (4) | 0.034 (4) | 0.005 (3) | 0.009 (3) | 0.007 (3) |
C6 | 0.032 (4) | 0.039 (4) | 0.026 (3) | −0.003 (3) | 0.003 (3) | −0.004 (3) |
C7 | 0.026 (3) | 0.031 (4) | 0.035 (3) | 0.001 (3) | 0.003 (3) | −0.001 (3) |
N1 | 0.033 (3) | 0.038 (4) | 0.059 (4) | −0.009 (3) | 0.017 (3) | −0.004 (3) |
O1 | 0.071 (4) | 0.025 (3) | 0.028 (3) | 0.004 (3) | 0.002 (2) | −0.002 (2) |
O2 | 0.081 (4) | 0.025 (3) | 0.044 (3) | −0.007 (3) | 0.010 (3) | 0.000 (2) |
O3 | 0.060 (4) | 0.062 (4) | 0.064 (4) | −0.032 (4) | 0.004 (3) | −0.017 (3) |
O4 | 0.059 (4) | 0.041 (3) | 0.082 (4) | −0.017 (3) | 0.021 (3) | 0.007 (4) |
N2 | 0.039 (4) | 0.064 (5) | 0.032 (3) | −0.004 (4) | −0.001 (3) | −0.002 (3) |
O5 | 0.069 (4) | 0.050 (4) | 0.052 (3) | −0.011 (4) | 0.000 (3) | −0.010 (3) |
O6 | 0.087 (5) | 0.075 (5) | 0.028 (3) | −0.019 (4) | 0.003 (3) | 0.001 (3) |
C8 | 0.042 (4) | 0.039 (4) | 0.025 (3) | −0.005 (3) | 0.008 (3) | −0.001 (3) |
C9 | 0.058 (5) | 0.049 (5) | 0.033 (4) | −0.020 (5) | 0.002 (4) | −0.007 (4) |
C10 | 0.048 (5) | 0.070 (7) | 0.039 (4) | −0.010 (5) | −0.013 (4) | −0.001 (4) |
C11 | 0.044 (5) | 0.056 (6) | 0.053 (5) | 0.003 (4) | −0.004 (4) | 0.010 (4) |
C12 | 0.046 (5) | 0.034 (4) | 0.046 (4) | 0.002 (4) | −0.001 (3) | −0.003 (4) |
C13 | 0.030 (3) | 0.032 (4) | 0.036 (4) | −0.005 (3) | 0.006 (3) | 0.004 (3) |
O7 | 0.059 (4) | 0.039 (3) | 0.035 (3) | 0.008 (3) | 0.005 (2) | 0.001 (3) |
N3 | 0.040 (3) | 0.027 (3) | 0.035 (3) | −0.001 (3) | 0.006 (2) | 0.000 (3) |
C1—O2 | 1.239 (9) | N2—O5 | 1.228 (10) |
C1—O1 | 1.269 (8) | C8—O7 | 1.378 (9) |
C1—C2 | 1.510 (10) | C8—C9 | 1.382 (10) |
C2—C7 | 1.390 (9) | C8—C13 | 1.401 (10) |
C2—C3 | 1.390 (10) | C9—C10 | 1.364 (14) |
C3—C4 | 1.383 (9) | C9—H4 | 0.9300 |
C3—H1 | 0.9300 | C10—C11 | 1.393 (14) |
C4—C5 | 1.370 (10) | C10—H5 | 0.9300 |
C4—N1 | 1.451 (10) | C11—C12 | 1.407 (11) |
C5—C6 | 1.393 (11) | C11—H6 | 0.9300 |
C5—H2 | 0.9300 | C12—C13 | 1.373 (11) |
C6—C7 | 1.377 (9) | C12—H7 | 0.9300 |
C6—N2 | 1.472 (9) | C13—N3 | 1.453 (9) |
C7—H3 | 0.9300 | O7—H8 | 0.8200 |
N1—O4 | 1.222 (9) | N3—H9 | 0.8900 |
N1—O3 | 1.223 (9) | N3—H10 | 0.8900 |
N2—O6 | 1.216 (9) | N3—H11 | 0.8900 |
O2—C1—O1 | 125.2 (7) | O5—N2—C6 | 117.5 (7) |
O2—C1—C2 | 117.6 (7) | O7—C8—C9 | 121.1 (7) |
O1—C1—C2 | 117.1 (6) | O7—C8—C13 | 120.6 (6) |
C7—C2—C3 | 119.4 (6) | C9—C8—C13 | 118.2 (8) |
C7—C2—C1 | 118.9 (6) | C10—C9—C8 | 121.6 (8) |
C3—C2—C1 | 121.6 (6) | C10—C9—H4 | 119.2 |
C4—C3—C2 | 120.3 (6) | C8—C9—H4 | 119.2 |
C4—C3—H1 | 119.9 | C9—C10—C11 | 119.6 (7) |
C2—C3—H1 | 119.9 | C9—C10—H5 | 120.2 |
C5—C4—C3 | 121.8 (7) | C11—C10—H5 | 120.2 |
C5—C4—N1 | 118.9 (6) | C10—C11—C12 | 120.3 (8) |
C3—C4—N1 | 119.2 (6) | C10—C11—H6 | 119.8 |
C4—C5—C6 | 116.4 (6) | C12—C11—H6 | 119.8 |
C4—C5—H2 | 121.8 | C13—C12—C11 | 118.3 (8) |
C6—C5—H2 | 121.8 | C13—C12—H7 | 120.8 |
C7—C6—C5 | 123.8 (6) | C11—C12—H7 | 120.8 |
C7—C6—N2 | 118.6 (7) | C12—C13—C8 | 121.8 (7) |
C5—C6—N2 | 117.3 (6) | C12—C13—N3 | 120.8 (7) |
C6—C7—C2 | 118.1 (7) | C8—C13—N3 | 117.5 (6) |
C6—C7—H3 | 121.0 | C8—O7—H8 | 109.5 |
C2—C7—H3 | 121.0 | C13—N3—H9 | 109.5 |
O4—N1—O3 | 124.3 (7) | C13—N3—H10 | 109.5 |
O4—N1—C4 | 117.3 (7) | H9—N3—H10 | 109.5 |
O3—N1—C4 | 118.4 (7) | C13—N3—H11 | 109.5 |
O6—N2—O5 | 123.2 (7) | H9—N3—H11 | 109.5 |
O6—N2—C6 | 119.3 (7) | H10—N3—H11 | 109.5 |
O2—C1—C2—C7 | −23.9 (10) | C5—C4—N1—O3 | 166.3 (7) |
O1—C1—C2—C7 | 158.5 (6) | C3—C4—N1—O3 | −12.2 (10) |
O2—C1—C2—C3 | 154.2 (7) | C7—C6—N2—O6 | −177.8 (7) |
O1—C1—C2—C3 | −23.4 (10) | C5—C6—N2—O6 | 7.0 (10) |
C7—C2—C3—C4 | 1.5 (10) | C7—C6—N2—O5 | 2.8 (10) |
C1—C2—C3—C4 | −176.6 (6) | C5—C6—N2—O5 | −172.4 (7) |
C2—C3—C4—C5 | −3.2 (11) | O7—C8—C9—C10 | −178.0 (8) |
C2—C3—C4—N1 | 175.2 (6) | C13—C8—C9—C10 | 0.3 (12) |
C3—C4—C5—C6 | 1.7 (10) | C8—C9—C10—C11 | −2.8 (13) |
N1—C4—C5—C6 | −176.7 (6) | C9—C10—C11—C12 | 3.3 (13) |
C4—C5—C6—C7 | 1.4 (10) | C10—C11—C12—C13 | −1.5 (12) |
C4—C5—C6—N2 | 176.3 (6) | C11—C12—C13—C8 | −1.0 (11) |
C5—C6—C7—C2 | −3.0 (10) | C11—C12—C13—N3 | 177.6 (7) |
N2—C6—C7—C2 | −177.8 (6) | O7—C8—C13—C12 | 179.9 (7) |
C3—C2—C7—C6 | 1.4 (10) | C9—C8—C13—C12 | 1.6 (11) |
C1—C2—C7—C6 | 179.6 (6) | O7—C8—C13—N3 | 1.3 (9) |
C5—C4—N1—O4 | −13.4 (10) | C9—C8—C13—N3 | −177.0 (7) |
C3—C4—N1—O4 | 168.1 (7) |
D—H···A | D—H | H···A | D···A | D—H···A |
O7—H8···O1i | 0.82 | 1.78 | 2.603 (7) | 179 |
N3—H9···O1ii | 0.89 | 1.90 | 2.771 (8) | 168 |
N3—H10···O7iii | 0.89 | 2.02 | 2.870 (8) | 159 |
N3—H11···O2i | 0.89 | 1.89 | 2.763 (8) | 166 |
C12—H7···O1ii | 0.93 | 2.53 | 3.240 (9) | 134 |
Symmetry codes: (i) x, y, z+1; (ii) x, y+1, z+1; (iii) −x+1, y+1/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C6H8NO+·C7H3N2O6− |
Mr | 321.25 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 297 |
a, b, c (Å) | 9.4988 (19), 6.0803 (12), 12.109 (2) |
β (°) | 95.21 (3) |
V (Å3) | 696.5 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.13 |
Crystal size (mm) | 0.35 × 0.22 × 0.20 |
Data collection | |
Diffractometer | Rigaku Mercury2 diffractometer |
Absorption correction | Multi-scan (CystalClear; Rigaku, 2005) |
Tmin, Tmax | 0.967, 0.975 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7134, 1733, 1209 |
Rint | 0.098 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.084, 0.218, 1.05 |
No. of reflections | 1733 |
No. of parameters | 210 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.38, −0.28 |
Computer programs: CrystalClear (Rigaku, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O7—H8···O1i | 0.82 | 1.78 | 2.603 (7) | 179.1 |
N3—H9···O1ii | 0.89 | 1.90 | 2.771 (8) | 167.6 |
N3—H10···O7iii | 0.89 | 2.02 | 2.870 (8) | 159.0 |
N3—H11···O2i | 0.89 | 1.89 | 2.763 (8) | 165.7 |
C12—H7···O1ii | 0.93 | 2.53 | 3.240 (9) | 133.5 |
Symmetry codes: (i) x, y, z+1; (ii) x, y+1, z+1; (iii) −x+1, y+1/2, −z+1. |
Acknowledgements
This work was supported financially by Nanjing University of Chinese Medicine for Young Researchers.
References
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The synthesis of multicomponent organic substances is of interest for obtaining supramolecular materials with potentially useful applications. In synthesizing such materials it is important to consider that the components contain complementary functional groups to build up links by suitable supramolecular interactions (Desiraju, 2002; Burrows, 2004). A very general way to achieve this goal is to employ components containing several matching functional groups with good hydrogen bond donor and acceptor capabilities combined with suitable backbones that bear the functional groups (Steiner, 2002). Following this strategy the title compound was synthesized from 2-hydroxyaniline and 3,5-dinitrobenzoic acid and was studied by X-ray diffraction. It is a proton-transfer salt, C6H8NO+.C7H3N2O6-, that is built up from two achiral components but crystallizes in the chiral space group P21 with one molecule of a 2-hydoxyanilinium cation and one molecule of a 3,5-dinitrobenzoate anion in the asymmetric unit (Fig. 1). The protonized amino group (—NH3+), which is a good hydrogen-bond donor (Wang et al. 2008), donates two hydrogen bonds to the carboxylate oxygen atoms O1 and O2 of two adjacent 3,5-dinitrobenzoate anions and to the hydroxy oxygen O7 of another 2-hydoxyanilinium cation (Table 1). The hydroxy group of the 2-hydoxyanilinium cation in turn donates a hydrogen bond to a carboxylate oxygen O1 of a third 3,5-dinitrobenzoate anion. In this way a two-stranded infinite hydrogen bond chain is formed along [010], as shown in Fig. 2. This chain is reinforced by a weak intra-chain C—H···O bond (last entry in Table 1). The chain has Z-shaped cross section (Fig. 2). The mutual coherence between these chains is provided by van der Waals interactions, which involve also nitro oxygen atoms. Ring-ring π-π stacking contacts are missing in this structure.