organic compounds
2-[7-Chloro-1,1-dioxo-2-(2,4,5-trifluorobenzyl)-3,4-dihydro-2H-1,2,4-benzothiadiazin-4-yl]acetic acid
aDepartment of Applied Chemistry, Beijing Institute of Technology, Zhongguancun South Street, 100081 Beijing, People's Republic of China, and bDepartment of Chemistry and Environmental Engineering, Anyang Institute of Technology, Henan 455000, People's Republic of China
*Correspondence e-mail: zcj@bit.edu.cn
In the molecule of the title compound, C16H12ClF3N2O4S, the thiadiazine ring adopts a half-chair conformation. The dihedral angle between the benzene ring of the benzothiadiazine ring system and trifluorophenyl group is 15.02 (7)°. In the crystal, centrosymmetrically related molecules are linked into dimers via pairs of O—H⋯O hydrogen bonds, generating R22(8) ring motifs. The dimers are further connected into a three-dimensional network by C—H⋯O hydrogen bonds.
Related literature
For the pharmacological properties of benzothiadiazine derivatives, see: Longman & Hamilton (1992); Buckheit et al. (1994); Yamada & Tang (1993); Phillips et al. (2002); Braghiroli et al. (2002); Pirotte et al. (1998); Francotte et al. (2007). For the biological properties and synthetic details of the title compound, see: Chen et al. (2010).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812014468/rz2722sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812014468/rz2722Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812014468/rz2722Isup3.cml
A mixture of methyl 2-(7-chloro-1,1-dioxido-2-(2,4,5-trifluorobenzyl)-2H-benzo[e][1,2,4]thiadiazin-4(3H)-yl)acetate (1 mmol), 1,4-dioxane (5 ml) and saturated aqueous sodium hydroxide (5 ml) was stirred at room temperature for 2 h. The alkaline suspension was adjusted to be acidic with 0.1 molar HCl and extracted with ethyl acetate (3 × 20 ml). The combined organic layers were dried over MgSO4 and filtered. The filtrate was concentrated to dryness under reduced pressure. Crystals suitable for X-ray diffraction were obtained by slow evaporation of a methanol solution of the compound (yield: 76%).
H atoms were positioned geometrically and refined using a riding model, with C—H = 0.93–0.97 Å, O—H = 0.82 Å and with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(O).
Data collection: APEX2 (Bruker, 2005); cell
SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title compound, with 30% probability displacement ellipsoids. |
C16H12ClF3N2O4S | F(000) = 856 |
Mr = 420.79 | Dx = 1.621 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 4599 reflections |
a = 9.3628 (2) Å | θ = 2.8–28.3° |
b = 12.3134 (2) Å | µ = 0.40 mm−1 |
c = 15.5597 (3) Å | T = 296 K |
β = 105.996 (1)° | Block, colourless |
V = 1724.39 (6) Å3 | 0.20 × 0.20 × 0.20 mm |
Z = 4 |
Bruker APEXII CCD diffractometer | 3302 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.027 |
Graphite monochromator | θmax = 28.3°, θmin = 2.1° |
ϕ and ω scans | h = −12→12 |
15140 measured reflections | k = −16→15 |
4293 independent reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.131 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0571P)2 + 1.0199P] where P = (Fo2 + 2Fc2)/3 |
4293 reflections | (Δ/σ)max < 0.001 |
245 parameters | Δρmax = 0.73 e Å−3 |
0 restraints | Δρmin = −0.82 e Å−3 |
C16H12ClF3N2O4S | V = 1724.39 (6) Å3 |
Mr = 420.79 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.3628 (2) Å | µ = 0.40 mm−1 |
b = 12.3134 (2) Å | T = 296 K |
c = 15.5597 (3) Å | 0.20 × 0.20 × 0.20 mm |
β = 105.996 (1)° |
Bruker APEXII CCD diffractometer | 3302 reflections with I > 2σ(I) |
15140 measured reflections | Rint = 0.027 |
4293 independent reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.131 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.73 e Å−3 |
4293 reflections | Δρmin = −0.82 e Å−3 |
245 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.45256 (6) | 0.88685 (5) | 0.08722 (3) | 0.04077 (16) | |
Cl1 | −0.00328 (10) | 0.62773 (8) | 0.09172 (6) | 0.0872 (3) | |
C11 | 0.8849 (2) | 0.89923 (18) | 0.16523 (14) | 0.0394 (5) | |
C5 | 0.3729 (2) | 0.79827 (17) | 0.14930 (12) | 0.0350 (4) | |
N2 | 0.62050 (19) | 0.90503 (15) | 0.15259 (11) | 0.0387 (4) | |
F2 | 1.26561 (18) | 1.08588 (15) | 0.23239 (13) | 0.0768 (5) | |
O1 | 0.46125 (19) | 0.83390 (17) | 0.00742 (10) | 0.0607 (5) | |
F3 | 1.0586 (2) | 1.12091 (14) | 0.07690 (12) | 0.0729 (5) | |
C12 | 0.9947 (3) | 0.88393 (19) | 0.24347 (15) | 0.0458 (5) | |
C6 | 0.2388 (2) | 0.75123 (19) | 0.10327 (14) | 0.0449 (5) | |
H6 | 0.1985 | 0.7648 | 0.0426 | 0.054* | |
N1 | 0.5746 (2) | 0.82433 (15) | 0.28393 (11) | 0.0392 (4) | |
F1 | 0.97529 (19) | 0.80656 (14) | 0.30117 (11) | 0.0714 (5) | |
O2 | 0.37472 (19) | 0.98763 (15) | 0.07985 (13) | 0.0597 (5) | |
C4 | 0.4382 (2) | 0.77835 (16) | 0.24064 (12) | 0.0341 (4) | |
C7 | 0.6157 (2) | 0.92240 (18) | 0.24459 (13) | 0.0400 (5) | |
H7A | 0.7126 | 0.9466 | 0.2802 | 0.048* | |
H7B | 0.5445 | 0.9792 | 0.2456 | 0.048* | |
C3 | 0.3601 (3) | 0.70893 (18) | 0.28347 (14) | 0.0435 (5) | |
H3 | 0.3996 | 0.6932 | 0.3438 | 0.052* | |
C2 | 0.2264 (3) | 0.66393 (19) | 0.23789 (16) | 0.0484 (5) | |
H2 | 0.1761 | 0.6192 | 0.2679 | 0.058* | |
C1 | 0.1662 (3) | 0.6843 (2) | 0.14823 (16) | 0.0489 (5) | |
C9 | 0.5751 (3) | 0.8936 (2) | 0.43292 (13) | 0.0447 (5) | |
C8 | 0.6382 (3) | 0.8131 (2) | 0.37949 (13) | 0.0462 (5) | |
H8A | 0.7449 | 0.8232 | 0.3935 | 0.055* | |
H8B | 0.6200 | 0.7400 | 0.3972 | 0.055* | |
C19 | 0.7430 (2) | 0.8351 (2) | 0.14144 (16) | 0.0468 (5) | |
H19A | 0.7213 | 0.8102 | 0.0800 | 0.056* | |
H19B | 0.7531 | 0.7720 | 0.1800 | 0.056* | |
C16 | 0.9087 (2) | 0.98074 (19) | 0.10813 (15) | 0.0442 (5) | |
H16 | 0.8376 | 0.9939 | 0.0542 | 0.053* | |
C15 | 1.0367 (3) | 1.0414 (2) | 0.13140 (16) | 0.0482 (5) | |
C14 | 1.1431 (3) | 1.0230 (2) | 0.21047 (18) | 0.0506 (6) | |
C13 | 1.1245 (3) | 0.9440 (2) | 0.26747 (17) | 0.0527 (6) | |
H13 | 1.1968 | 0.9307 | 0.3209 | 0.063* | |
O4 | 0.6474 (2) | 0.89659 (17) | 0.51717 (10) | 0.0651 (6) | |
H4 | 0.6053 | 0.9380 | 0.5435 | 0.098* | |
O3 | 0.4682 (2) | 0.95079 (17) | 0.39943 (11) | 0.0645 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0349 (3) | 0.0559 (3) | 0.0303 (2) | −0.0079 (2) | 0.00703 (18) | 0.0092 (2) |
Cl1 | 0.0666 (5) | 0.1026 (7) | 0.0868 (6) | −0.0466 (5) | 0.0117 (4) | 0.0042 (5) |
C11 | 0.0321 (10) | 0.0454 (12) | 0.0418 (11) | 0.0012 (9) | 0.0122 (8) | −0.0088 (9) |
C5 | 0.0337 (10) | 0.0405 (11) | 0.0317 (9) | −0.0010 (8) | 0.0107 (7) | 0.0047 (8) |
N2 | 0.0305 (8) | 0.0499 (10) | 0.0360 (8) | −0.0045 (7) | 0.0095 (7) | −0.0032 (7) |
F2 | 0.0449 (9) | 0.0762 (11) | 0.1085 (14) | −0.0195 (8) | 0.0196 (9) | −0.0269 (10) |
O1 | 0.0554 (10) | 0.0992 (15) | 0.0291 (7) | −0.0253 (10) | 0.0143 (7) | −0.0050 (8) |
F3 | 0.0804 (12) | 0.0682 (11) | 0.0810 (11) | −0.0100 (9) | 0.0403 (10) | 0.0087 (8) |
C12 | 0.0422 (12) | 0.0479 (13) | 0.0464 (12) | 0.0040 (10) | 0.0108 (9) | 0.0000 (10) |
C6 | 0.0404 (12) | 0.0546 (14) | 0.0376 (10) | −0.0088 (10) | 0.0072 (9) | 0.0050 (9) |
N1 | 0.0435 (10) | 0.0441 (10) | 0.0272 (8) | 0.0020 (8) | 0.0052 (7) | −0.0012 (7) |
F1 | 0.0715 (11) | 0.0740 (11) | 0.0638 (10) | 0.0000 (9) | 0.0101 (8) | 0.0207 (8) |
O2 | 0.0453 (10) | 0.0598 (11) | 0.0706 (11) | 0.0027 (8) | 0.0101 (8) | 0.0289 (9) |
C4 | 0.0403 (11) | 0.0337 (10) | 0.0292 (9) | 0.0057 (8) | 0.0110 (8) | 0.0000 (7) |
C7 | 0.0384 (11) | 0.0444 (12) | 0.0362 (10) | −0.0029 (9) | 0.0084 (8) | −0.0067 (8) |
C3 | 0.0597 (14) | 0.0408 (12) | 0.0341 (10) | 0.0057 (10) | 0.0195 (9) | 0.0073 (8) |
C2 | 0.0582 (14) | 0.0397 (12) | 0.0555 (13) | −0.0028 (11) | 0.0295 (11) | 0.0075 (10) |
C1 | 0.0440 (13) | 0.0486 (13) | 0.0552 (13) | −0.0125 (10) | 0.0154 (10) | 0.0009 (10) |
C9 | 0.0438 (12) | 0.0551 (14) | 0.0305 (9) | 0.0077 (10) | 0.0025 (8) | −0.0027 (9) |
C8 | 0.0468 (12) | 0.0566 (14) | 0.0310 (10) | 0.0132 (11) | 0.0036 (8) | −0.0007 (9) |
C19 | 0.0383 (12) | 0.0501 (13) | 0.0527 (13) | −0.0044 (10) | 0.0138 (9) | −0.0133 (10) |
C16 | 0.0386 (11) | 0.0549 (14) | 0.0402 (11) | 0.0035 (10) | 0.0124 (9) | −0.0059 (9) |
C15 | 0.0477 (13) | 0.0486 (13) | 0.0544 (13) | 0.0009 (10) | 0.0243 (11) | −0.0043 (10) |
C14 | 0.0335 (11) | 0.0531 (14) | 0.0666 (15) | −0.0051 (10) | 0.0160 (10) | −0.0196 (12) |
C13 | 0.0352 (12) | 0.0634 (16) | 0.0525 (13) | 0.0073 (11) | 0.0005 (9) | −0.0104 (12) |
O4 | 0.0648 (12) | 0.0852 (14) | 0.0333 (8) | 0.0296 (10) | −0.0066 (8) | −0.0137 (8) |
O3 | 0.0606 (11) | 0.0843 (14) | 0.0379 (8) | 0.0325 (10) | −0.0042 (7) | −0.0133 (8) |
S1—O1 | 1.4245 (17) | C4—C3 | 1.407 (3) |
S1—O2 | 1.4277 (19) | C7—H7A | 0.9700 |
S1—N2 | 1.6357 (18) | C7—H7B | 0.9700 |
S1—C5 | 1.7540 (19) | C3—C2 | 1.374 (3) |
Cl1—C1 | 1.734 (2) | C3—H3 | 0.9300 |
C11—C12 | 1.373 (3) | C2—C1 | 1.376 (3) |
C11—C16 | 1.398 (3) | C2—H2 | 0.9300 |
C11—C19 | 1.502 (3) | C9—O3 | 1.217 (3) |
C5—C6 | 1.389 (3) | C9—O4 | 1.300 (2) |
C5—C4 | 1.405 (3) | C9—C8 | 1.514 (3) |
N2—C7 | 1.460 (2) | C8—H8A | 0.9700 |
N2—C19 | 1.482 (3) | C8—H8B | 0.9700 |
F2—C14 | 1.347 (3) | C19—H19A | 0.9700 |
F3—C15 | 1.347 (3) | C19—H19B | 0.9700 |
C12—F1 | 1.355 (3) | C16—C15 | 1.374 (3) |
C12—C13 | 1.383 (3) | C16—H16 | 0.9300 |
C6—C1 | 1.376 (3) | C15—C14 | 1.372 (4) |
C6—H6 | 0.9300 | C14—C13 | 1.360 (4) |
N1—C4 | 1.389 (3) | C13—H13 | 0.9300 |
N1—C8 | 1.448 (2) | O4—H4 | 0.8200 |
N1—C7 | 1.453 (3) | ||
O1—S1—O2 | 118.58 (12) | C4—C3—H3 | 119.4 |
O1—S1—N2 | 109.19 (10) | C3—C2—C1 | 120.7 (2) |
O2—S1—N2 | 108.23 (11) | C3—C2—H2 | 119.7 |
O1—S1—C5 | 109.30 (11) | C1—C2—H2 | 119.7 |
O2—S1—C5 | 107.43 (10) | C6—C1—C2 | 120.2 (2) |
N2—S1—C5 | 102.98 (9) | C6—C1—Cl1 | 119.63 (19) |
C12—C11—C16 | 116.8 (2) | C2—C1—Cl1 | 120.18 (18) |
C12—C11—C19 | 122.8 (2) | O3—C9—O4 | 123.6 (2) |
C16—C11—C19 | 120.4 (2) | O3—C9—C8 | 122.87 (19) |
C6—C5—C4 | 121.91 (19) | O4—C9—C8 | 113.50 (19) |
C6—C5—S1 | 115.88 (15) | N1—C8—C9 | 112.90 (18) |
C4—C5—S1 | 122.18 (16) | N1—C8—H8A | 109.0 |
C7—N2—C19 | 115.69 (18) | C9—C8—H8A | 109.0 |
C7—N2—S1 | 110.23 (13) | N1—C8—H8B | 109.0 |
C19—N2—S1 | 119.35 (14) | C9—C8—H8B | 109.0 |
F1—C12—C11 | 118.7 (2) | H8A—C8—H8B | 107.8 |
F1—C12—C13 | 117.7 (2) | N2—C19—C11 | 109.07 (18) |
C11—C12—C13 | 123.6 (2) | N2—C19—H19A | 109.9 |
C1—C6—C5 | 119.4 (2) | C11—C19—H19A | 109.9 |
C1—C6—H6 | 120.3 | N2—C19—H19B | 109.9 |
C5—C6—H6 | 120.3 | C11—C19—H19B | 109.9 |
C4—N1—C8 | 121.46 (18) | H19A—C19—H19B | 108.3 |
C4—N1—C7 | 116.70 (16) | C15—C16—C11 | 120.2 (2) |
C8—N1—C7 | 115.48 (18) | C15—C16—H16 | 119.9 |
N1—C4—C5 | 120.34 (18) | C11—C16—H16 | 119.9 |
N1—C4—C3 | 123.12 (18) | F3—C15—C14 | 119.1 (2) |
C5—C4—C3 | 116.53 (19) | F3—C15—C16 | 120.2 (2) |
N1—C7—N2 | 112.00 (17) | C14—C15—C16 | 120.8 (2) |
N1—C7—H7A | 109.2 | F2—C14—C13 | 120.0 (2) |
N2—C7—H7A | 109.2 | F2—C14—C15 | 119.3 (2) |
N1—C7—H7B | 109.2 | C13—C14—C15 | 120.7 (2) |
N2—C7—H7B | 109.2 | C14—C13—C12 | 117.9 (2) |
H7A—C7—H7B | 107.9 | C14—C13—H13 | 121.1 |
C2—C3—C4 | 121.29 (19) | C12—C13—H13 | 121.1 |
C2—C3—H3 | 119.4 | C9—O4—H4 | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4···O3i | 0.82 | 1.86 | 2.676 (2) | 171 |
C3—H3···O1ii | 0.93 | 2.47 | 3.391 (3) | 169 |
C16—H16···O2iii | 0.93 | 2.46 | 3.387 (2) | 172 |
C13—H13···O3iv | 0.93 | 2.51 | 3.307 (3) | 144 |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) x, −y+3/2, z+1/2; (iii) −x+1, −y+2, −z; (iv) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C16H12ClF3N2O4S |
Mr | 420.79 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 296 |
a, b, c (Å) | 9.3628 (2), 12.3134 (2), 15.5597 (3) |
β (°) | 105.996 (1) |
V (Å3) | 1724.39 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.40 |
Crystal size (mm) | 0.20 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15140, 4293, 3302 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.131, 1.04 |
No. of reflections | 4293 |
No. of parameters | 245 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.73, −0.82 |
Computer programs: APEX2 (Bruker, 2005), SAINT-Plus (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4···O3i | 0.82 | 1.86 | 2.676 (2) | 170.6 |
C3—H3···O1ii | 0.93 | 2.47 | 3.391 (3) | 169 |
C16—H16···O2iii | 0.93 | 2.46 | 3.387 (2) | 172 |
C13—H13···O3iv | 0.93 | 2.51 | 3.307 (3) | 144 |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) x, −y+3/2, z+1/2; (iii) −x+1, −y+2, −z; (iv) x+1, y, z. |
Acknowledgements
This work was supported by the Beijing Natural Science Foundation (No. 7102091) and the Research Fund for the Doctoral Program of Higher Education of China (No. 20111101110042).
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Benzothiadiazine derivatives have attracted considerable attention because they are endowed with a large spectrum of properties. Since the 1950's, various pharmacological investigations of newly synthesized benzothiadiazines demonstrated interesting pharmacological activities and showed great potential for the development of new medications for treating diseases (Longman & Hamilton, 1992; Buckheit et al., 1994; Yamada & Tang, 1993; Phillips et al., 2002; Braghiroli et al., 2002; Pirotte et al., 1998; Francotte et al., 2007). The title compound, whose structure is reported herein, was synthesized and used as an aldose reductase inhibitor (Chen et al., 2010).
In the molecule of the title compound (Fig. 1), the thiadiazine ring (C7/N1/C4/C5/S1/N2) adopts a half-chair conformation, with puckering parameters QT = 0.5164 (19) Å, θ = 47.5 (2)° and ϕ = -25.9 (3)°. The deviation of the S1, N1 and N2 atoms from the plane of the benzene ring of the benzothiadiazin ring system are -0.0726 (6), 0.0305 (19) and 0.2655 (18) Å, respectively. The dihedral angle formed by the two six-membered aromatic rings C1–C6 and C11–C16 is 15.02 (7)°. In the crystal, centrosymmetrically related molecules interact to form dimers through pairs of O—H···O hydrogen bonds (Table 1) generating a R22(8) ring motif. The dimers are further linked into a three-dimensional network by intermolecular C—H···O hydrogen bonds (Table 1).