metal-organic compounds
{S-Benzyl 3-[(6-methylpyridin-2-yl-κN)methylidene]dithiocarbazato-κ2N3,S}zinc
aDepartment of Chemistry, Faculty of Science, Universiti Putra Malaysia, 43400 UPM, Serdang, Selangor, Malaysia
*Correspondence e-mail: thahira.begum@science.upm.edu.my
The title compound, [Zn(C15H14N3S2)2], contains two chemically equivalent Schiff base anions that are coordinated to the ZnII ion as tridentate N,N′,S-chelating ligands, creating a distorted octahedral environment [the smallest angle being 75.40 (6)° and the widest angle being 162.87 (6)°], with the two S atoms in cis positions. The dihedral angle between the mean planes of the two coordinating ligands is 85.65 (5)°. Weak C—H⋯S hydrogen bonds are also observed.
Related literature
For background to the coordination chemistry of hydrazine carbodithioates, see: Ravoof et al. (2010). For the synthesis, see: Ali et al. (1997); Ravoof et al. (2004). For related structures, see: Ali et al. (2001); Tarafder et al. (2001).
Experimental
Crystal data
|
Refinement
|
|
Data collection: Gemini User Manual (Oxford Diffraction, 2006); cell CrysAlis PRO (Agilent, 2011); data reduction: CrysAlis PRO; program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003); molecular graphics: CAMERON (Watkin et al., 1996); software used to prepare material for publication: CRYSTALS.
Supporting information
10.1107/S1600536812013529/wm2612sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812013529/wm2612Isup2.hkl
Zinc(II) saccharinate, [Zn(sac)2(H2O)4].2H2O was synthesized using a similar procedure as for the synthesis of Cu(II) saccharinate (Ravoof et al. (2004)). The title compound was synthesized following the procedure by Ali et al. (1997). The Schiff base was dissolved in acetonitrile (50 ml) and mixed with an equimolar quantity of zinc(II) saccharinate in acetonitrile (25 ml). The resulting mixture was heated on a water bath until the volume reduced to ca 30 ml. On standing overnight in the fridge, the mixture yielded yellow crystals suitable for X-ray analysis.
H atoms were all located in difference maps; those attached to carbon atoms were repositioned geometrically. The H atoms were initially refined with soft restraints on the bond lengths and angles to regularize their geometry (C—H in the range 0.93–0.98, N—H in the range 0.86–0.89 Å) and Uiso(H)(in the range 1.2–1.5 times Ueq of the parent atom), after which the positions were refined with riding constraints.
Data collection: Gemini User Manual (Oxford Diffraction, 2006); cell
CrysAlis PRO (Agilent, 2011); data reduction: CrysAlis PRO (Agilent, 2011); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003); molecular graphics: CAMERON (Watkin et al., 1996); software used to prepare material for publication: CRYSTALS (Betteridge et al., 2003).[Zn(C15H14N3S2)2] | F(000) = 1376 |
Mr = 666.24 | Dx = 1.438 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 6730 reflections |
a = 14.8931 (8) Å | θ = 2–29° |
b = 13.0630 (5) Å | µ = 1.10 mm−1 |
c = 17.1706 (9) Å | T = 150 K |
β = 112.855 (6)° | Prism, yellow |
V = 3078.2 (3) Å3 | 0.24 × 0.18 × 0.16 mm |
Z = 4 |
Oxford Diffraction Gemini diffractometer | 7140 independent reflections |
Radiation source: sealed X-ray tube | 5960 reflections with I > 2.0σ(I) |
Graphite monochromator | Rint = 0.040 |
ϕ scans | θmax = 28.9°, θmin = 2.2° |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | h = −19→16 |
Tmin = 0.82, Tmax = 0.84 | k = −17→16 |
20496 measured reflections | l = −23→22 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | H-atom parameters constrained |
wR(F2) = 0.076 | Method = Modified Sheldrick w = 1/[σ2(F2) + (0.02P)2 + 2.2P], where P = (max(Fo2,0) + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max = 0.001 |
7140 reflections | Δρmax = 0.60 e Å−3 |
370 parameters | Δρmin = −0.44 e Å−3 |
0 restraints |
[Zn(C15H14N3S2)2] | V = 3078.2 (3) Å3 |
Mr = 666.24 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 14.8931 (8) Å | µ = 1.10 mm−1 |
b = 13.0630 (5) Å | T = 150 K |
c = 17.1706 (9) Å | 0.24 × 0.18 × 0.16 mm |
β = 112.855 (6)° |
Oxford Diffraction Gemini diffractometer | 7140 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | 5960 reflections with I > 2.0σ(I) |
Tmin = 0.82, Tmax = 0.84 | Rint = 0.040 |
20496 measured reflections |
R[F2 > 2σ(F2)] = 0.035 | 0 restraints |
wR(F2) = 0.076 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.60 e Å−3 |
7140 reflections | Δρmin = −0.44 e Å−3 |
370 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems open-flow nitrogen cryostat (Cosier & Glazer, 1986) with a nominal stability of 0.1 K. Cosier, J. & Glazer, A.M., 1986. J. Appl. Cryst. 105–107. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.300629 (18) | 0.602950 (17) | 0.084816 (14) | 0.0209 | |
C101 | 0.27973 (16) | 0.77374 (16) | −0.03043 (13) | 0.0272 | |
N102 | 0.25268 (13) | 0.74645 (13) | 0.02846 (10) | 0.0231 | |
N103 | 0.20970 (14) | 0.81978 (13) | 0.06093 (11) | 0.0266 | |
C104 | 0.18607 (15) | 0.78256 (15) | 0.12131 (13) | 0.0238 | |
S105 | 0.20083 (4) | 0.66180 (4) | 0.16361 (3) | 0.0242 | |
S106 | 0.13026 (5) | 0.86700 (4) | 0.16857 (4) | 0.0303 | |
C107 | 0.1375 (2) | 0.99155 (16) | 0.12297 (15) | 0.0360 | |
C108 | 0.10104 (17) | 1.06947 (15) | 0.16809 (13) | 0.0254 | |
C109 | 0.00675 (19) | 1.10708 (19) | 0.13364 (16) | 0.0401 | |
C110 | −0.0244 (2) | 1.1781 (2) | 0.1783 (2) | 0.0518 | |
C111 | 0.0374 (2) | 1.2108 (2) | 0.25574 (18) | 0.0475 | |
C112 | 0.1300 (2) | 1.17467 (19) | 0.29026 (16) | 0.0419 | |
C113 | 0.16190 (18) | 1.10461 (17) | 0.24719 (14) | 0.0329 | |
C114 | 0.32420 (16) | 0.69782 (16) | −0.06656 (12) | 0.0254 | |
N115 | 0.33418 (12) | 0.60182 (13) | −0.03328 (10) | 0.0220 | |
C116 | 0.36939 (15) | 0.52813 (17) | −0.06804 (12) | 0.0249 | |
C117 | 0.39613 (17) | 0.54928 (19) | −0.13592 (13) | 0.0323 | |
C118 | 0.38820 (17) | 0.6466 (2) | −0.16798 (14) | 0.0353 | |
C119 | 0.35103 (17) | 0.72300 (19) | −0.13278 (13) | 0.0318 | |
C120 | 0.37826 (17) | 0.42206 (17) | −0.03333 (14) | 0.0310 | |
C201 | 0.33127 (15) | 0.39948 (15) | 0.16182 (12) | 0.0219 | |
N202 | 0.37232 (12) | 0.48744 (12) | 0.17189 (10) | 0.0193 | |
N203 | 0.45554 (12) | 0.50154 (12) | 0.24379 (10) | 0.0209 | |
C204 | 0.49345 (15) | 0.59270 (15) | 0.24628 (12) | 0.0201 | |
S205 | 0.46105 (4) | 0.68753 (4) | 0.17153 (3) | 0.0241 | |
S206 | 0.59395 (4) | 0.62465 (4) | 0.33815 (3) | 0.0270 | |
C207 | 0.60458 (17) | 0.51704 (16) | 0.40886 (13) | 0.0287 | |
C208 | 0.65317 (16) | 0.55374 (16) | 0.49885 (12) | 0.0251 | |
C209 | 0.75115 (17) | 0.53836 (17) | 0.54403 (13) | 0.0296 | |
C210 | 0.79462 (18) | 0.5666 (2) | 0.62843 (14) | 0.0378 | |
C211 | 0.7396 (2) | 0.6122 (2) | 0.66756 (15) | 0.0422 | |
C212 | 0.6416 (2) | 0.6308 (2) | 0.62209 (15) | 0.0430 | |
C213 | 0.59881 (18) | 0.60225 (18) | 0.53807 (15) | 0.0351 | |
C214 | 0.23803 (15) | 0.38605 (15) | 0.09042 (12) | 0.0216 | |
N215 | 0.20544 (12) | 0.46762 (13) | 0.03850 (10) | 0.0218 | |
C216 | 0.11911 (16) | 0.46101 (17) | −0.02648 (13) | 0.0266 | |
C217 | 0.06312 (18) | 0.37251 (19) | −0.04065 (15) | 0.0350 | |
C218 | 0.09638 (18) | 0.28982 (19) | 0.01244 (15) | 0.0388 | |
C219 | 0.18571 (17) | 0.29602 (17) | 0.07917 (14) | 0.0302 | |
C220 | 0.08524 (18) | 0.55213 (19) | −0.08347 (14) | 0.0369 | |
H1011 | 0.2715 | 0.8424 | −0.0515 | 0.0327* | |
H1072 | 0.2072 | 1.0050 | 0.1335 | 0.0461* | |
H1071 | 0.0962 | 0.9913 | 0.0627 | 0.0454* | |
H1091 | −0.0363 | 1.0851 | 0.0796 | 0.0501* | |
H1101 | −0.0889 | 1.2035 | 0.1551 | 0.0624* | |
H1111 | 0.0150 | 1.2586 | 0.2866 | 0.0587* | |
H1121 | 0.1747 | 1.1974 | 0.3454 | 0.0517* | |
H1131 | 0.2276 | 1.0814 | 0.2716 | 0.0400* | |
H1171 | 0.4218 | 0.4964 | −0.1593 | 0.0404* | |
H1181 | 0.4076 | 0.6625 | −0.2132 | 0.0415* | |
H1191 | 0.3423 | 0.7915 | −0.1540 | 0.0399* | |
H1202 | 0.4177 | 0.3813 | −0.0527 | 0.0470* | |
H1201 | 0.4052 | 0.4216 | 0.0275 | 0.0468* | |
H1203 | 0.3161 | 0.3906 | −0.0510 | 0.0476* | |
H2011 | 0.3592 | 0.3449 | 0.1992 | 0.0266* | |
H2072 | 0.6431 | 0.4624 | 0.3966 | 0.0372* | |
H2071 | 0.5394 | 0.4936 | 0.3977 | 0.0362* | |
H2091 | 0.7893 | 0.5079 | 0.5173 | 0.0370* | |
H2101 | 0.8626 | 0.5554 | 0.6590 | 0.0470* | |
H2111 | 0.7694 | 0.6310 | 0.7260 | 0.0503* | |
H2121 | 0.6039 | 0.6645 | 0.6492 | 0.0506* | |
H2131 | 0.5299 | 0.6139 | 0.5059 | 0.0429* | |
H2171 | 0.0017 | 0.3713 | −0.0865 | 0.0417* | |
H2181 | 0.0575 | 0.2294 | 0.0036 | 0.0463* | |
H2191 | 0.2108 | 0.2407 | 0.1158 | 0.0359* | |
H2202 | 0.0192 | 0.5429 | −0.1229 | 0.0561* | |
H2201 | 0.0899 | 0.6126 | −0.0497 | 0.0562* | |
H2203 | 0.1277 | 0.5617 | −0.1133 | 0.0567* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.02306 (14) | 0.01875 (12) | 0.02010 (12) | 0.00037 (10) | 0.00743 (10) | 0.00014 (9) |
C101 | 0.0334 (13) | 0.0240 (11) | 0.0244 (10) | 0.0000 (9) | 0.0116 (9) | 0.0036 (8) |
N102 | 0.0235 (10) | 0.0233 (9) | 0.0218 (8) | 0.0011 (7) | 0.0080 (7) | −0.0018 (7) |
N103 | 0.0333 (11) | 0.0199 (9) | 0.0291 (9) | 0.0036 (8) | 0.0149 (8) | −0.0010 (7) |
C104 | 0.0236 (11) | 0.0212 (10) | 0.0262 (10) | −0.0010 (9) | 0.0092 (9) | −0.0057 (8) |
S105 | 0.0270 (3) | 0.0210 (3) | 0.0275 (3) | −0.0008 (2) | 0.0137 (2) | −0.0007 (2) |
S106 | 0.0387 (3) | 0.0215 (3) | 0.0403 (3) | 0.0000 (2) | 0.0257 (3) | −0.0030 (2) |
C107 | 0.0553 (17) | 0.0231 (11) | 0.0379 (13) | 0.0020 (11) | 0.0271 (12) | −0.0009 (10) |
C108 | 0.0333 (13) | 0.0169 (10) | 0.0298 (11) | 0.0009 (9) | 0.0163 (10) | 0.0021 (8) |
C109 | 0.0324 (14) | 0.0358 (14) | 0.0423 (14) | −0.0022 (11) | 0.0038 (11) | 0.0000 (11) |
C110 | 0.0314 (15) | 0.0476 (16) | 0.076 (2) | 0.0186 (13) | 0.0209 (15) | 0.0102 (15) |
C111 | 0.061 (2) | 0.0376 (15) | 0.0544 (17) | 0.0121 (14) | 0.0335 (15) | −0.0045 (12) |
C112 | 0.0561 (18) | 0.0335 (13) | 0.0353 (13) | 0.0042 (12) | 0.0169 (12) | −0.0056 (11) |
C113 | 0.0322 (13) | 0.0313 (12) | 0.0318 (12) | 0.0081 (10) | 0.0087 (10) | 0.0022 (10) |
C114 | 0.0250 (12) | 0.0316 (11) | 0.0182 (9) | −0.0017 (9) | 0.0068 (8) | −0.0004 (8) |
N115 | 0.0209 (9) | 0.0264 (9) | 0.0177 (8) | −0.0019 (7) | 0.0064 (7) | −0.0024 (7) |
C116 | 0.0175 (11) | 0.0346 (12) | 0.0209 (10) | −0.0013 (9) | 0.0056 (8) | −0.0075 (9) |
C117 | 0.0267 (12) | 0.0474 (14) | 0.0253 (11) | −0.0007 (11) | 0.0128 (10) | −0.0083 (10) |
C118 | 0.0314 (13) | 0.0554 (16) | 0.0219 (10) | −0.0043 (12) | 0.0135 (10) | 0.0011 (10) |
C119 | 0.0343 (13) | 0.0409 (13) | 0.0214 (10) | −0.0023 (11) | 0.0120 (10) | 0.0039 (9) |
C120 | 0.0313 (13) | 0.0317 (12) | 0.0323 (12) | 0.0025 (10) | 0.0150 (10) | −0.0060 (9) |
C201 | 0.0264 (11) | 0.0183 (10) | 0.0214 (9) | −0.0001 (8) | 0.0098 (9) | 0.0004 (8) |
N202 | 0.0214 (9) | 0.0183 (8) | 0.0188 (8) | −0.0004 (7) | 0.0083 (7) | −0.0024 (6) |
N203 | 0.0205 (9) | 0.0215 (8) | 0.0191 (8) | −0.0013 (7) | 0.0061 (7) | −0.0005 (7) |
C204 | 0.0193 (10) | 0.0233 (10) | 0.0187 (9) | 0.0007 (8) | 0.0084 (8) | −0.0014 (8) |
S205 | 0.0259 (3) | 0.0211 (2) | 0.0236 (2) | −0.0033 (2) | 0.0079 (2) | 0.0020 (2) |
S206 | 0.0254 (3) | 0.0278 (3) | 0.0226 (2) | −0.0076 (2) | 0.0037 (2) | 0.0013 (2) |
C207 | 0.0316 (13) | 0.0248 (11) | 0.0248 (10) | −0.0040 (9) | 0.0057 (9) | 0.0027 (9) |
C208 | 0.0284 (12) | 0.0226 (10) | 0.0229 (10) | −0.0041 (9) | 0.0084 (9) | 0.0014 (8) |
C209 | 0.0291 (13) | 0.0298 (12) | 0.0292 (11) | 0.0011 (10) | 0.0106 (10) | −0.0059 (9) |
C210 | 0.0304 (14) | 0.0474 (15) | 0.0294 (12) | −0.0009 (11) | 0.0048 (10) | −0.0078 (11) |
C211 | 0.0447 (16) | 0.0558 (17) | 0.0248 (11) | −0.0060 (13) | 0.0123 (11) | −0.0100 (11) |
C212 | 0.0444 (16) | 0.0561 (17) | 0.0357 (13) | 0.0046 (13) | 0.0233 (12) | −0.0062 (12) |
C213 | 0.0287 (13) | 0.0452 (14) | 0.0332 (12) | 0.0035 (11) | 0.0140 (10) | 0.0039 (11) |
C214 | 0.0242 (11) | 0.0216 (10) | 0.0229 (10) | −0.0027 (8) | 0.0134 (9) | −0.0041 (8) |
N215 | 0.0232 (9) | 0.0227 (9) | 0.0213 (8) | −0.0010 (7) | 0.0106 (7) | −0.0034 (7) |
C216 | 0.0227 (11) | 0.0341 (12) | 0.0240 (10) | −0.0007 (9) | 0.0101 (9) | −0.0047 (9) |
C217 | 0.0258 (13) | 0.0433 (14) | 0.0315 (12) | −0.0091 (11) | 0.0064 (10) | −0.0085 (10) |
C218 | 0.0356 (15) | 0.0367 (14) | 0.0425 (14) | −0.0183 (11) | 0.0136 (12) | −0.0071 (11) |
C219 | 0.0328 (13) | 0.0266 (11) | 0.0310 (11) | −0.0065 (10) | 0.0120 (10) | −0.0015 (9) |
C220 | 0.0281 (13) | 0.0416 (14) | 0.0326 (12) | 0.0022 (11) | 0.0028 (10) | 0.0027 (11) |
Zn1—N102 | 2.1032 (17) | C120—H1202 | 0.944 |
Zn1—S105 | 2.4885 (6) | C120—H1201 | 0.963 |
Zn1—N115 | 2.2692 (16) | C120—H1203 | 0.948 |
Zn1—N202 | 2.1005 (16) | C201—N202 | 1.281 (2) |
Zn1—S205 | 2.5263 (6) | C201—C214 | 1.463 (3) |
Zn1—N215 | 2.2117 (17) | C201—H2011 | 0.942 |
C101—N102 | 1.276 (3) | N202—N203 | 1.380 (2) |
C101—C114 | 1.458 (3) | N203—C204 | 1.312 (2) |
C101—H1011 | 0.956 | C204—S205 | 1.713 (2) |
N102—N103 | 1.384 (2) | C204—S206 | 1.752 (2) |
N103—C104 | 1.311 (3) | S206—C207 | 1.824 (2) |
C104—S105 | 1.715 (2) | C207—C208 | 1.507 (3) |
C104—S106 | 1.758 (2) | C207—H2072 | 0.988 |
S106—C107 | 1.827 (2) | C207—H2071 | 0.964 |
C107—C108 | 1.503 (3) | C208—C209 | 1.376 (3) |
C107—H1072 | 0.998 | C208—C213 | 1.391 (3) |
C107—H1071 | 0.977 | C209—C210 | 1.388 (3) |
C108—C109 | 1.385 (3) | C209—H2091 | 0.945 |
C108—C113 | 1.386 (3) | C210—C211 | 1.380 (3) |
C109—C110 | 1.393 (4) | C210—H2101 | 0.953 |
C109—H1091 | 0.945 | C211—C212 | 1.383 (4) |
C110—C111 | 1.359 (4) | C211—H2111 | 0.958 |
C110—H1101 | 0.946 | C212—C213 | 1.383 (3) |
C111—C112 | 1.356 (4) | C212—H2121 | 0.962 |
C111—H1111 | 0.959 | C213—H2131 | 0.970 |
C112—C113 | 1.373 (3) | C214—N215 | 1.353 (3) |
C112—H1121 | 0.968 | C214—C219 | 1.382 (3) |
C113—H1131 | 0.953 | N215—C216 | 1.338 (3) |
C114—N115 | 1.362 (3) | C216—C217 | 1.390 (3) |
C114—C119 | 1.383 (3) | C216—C220 | 1.498 (3) |
N115—C116 | 1.342 (3) | C217—C218 | 1.376 (3) |
C116—C117 | 1.398 (3) | C217—H2171 | 0.948 |
C116—C120 | 1.494 (3) | C218—C219 | 1.380 (3) |
C117—C118 | 1.372 (3) | C218—H2181 | 0.955 |
C117—H1171 | 0.950 | C219—H2191 | 0.936 |
C118—C119 | 1.389 (3) | C220—H2202 | 0.960 |
C118—H1181 | 0.951 | C220—H2201 | 0.967 |
C119—H1191 | 0.956 | C220—H2203 | 0.964 |
N102—Zn1—S105 | 78.87 (5) | C114—C119—H1191 | 119.7 |
N102—Zn1—N115 | 75.40 (6) | C116—C120—H1202 | 110.7 |
S105—Zn1—N115 | 150.83 (5) | C116—C120—H1201 | 111.9 |
N102—Zn1—N202 | 162.87 (6) | H1202—C120—H1201 | 109.0 |
S105—Zn1—N202 | 94.63 (5) | C116—C120—H1203 | 110.5 |
N115—Zn1—N202 | 113.82 (6) | H1202—C120—H1203 | 107.8 |
N102—Zn1—S205 | 87.46 (5) | H1201—C120—H1203 | 106.7 |
S105—Zn1—S205 | 99.92 (2) | N202—C201—C214 | 117.93 (18) |
N115—Zn1—S205 | 92.49 (5) | N202—C201—H2011 | 121.7 |
N202—Zn1—S205 | 77.98 (5) | C214—C201—H2011 | 120.3 |
N102—Zn1—N215 | 119.43 (6) | Zn1—N202—C201 | 117.66 (14) |
S105—Zn1—N215 | 90.44 (4) | Zn1—N202—N203 | 124.91 (12) |
N115—Zn1—N215 | 90.36 (6) | C201—N202—N203 | 117.12 (16) |
N202—Zn1—N215 | 76.08 (6) | N202—N203—C204 | 112.08 (16) |
S205—Zn1—N215 | 152.73 (5) | N203—C204—S205 | 129.78 (16) |
N102—C101—C114 | 118.85 (19) | N203—C204—S206 | 116.88 (15) |
N102—C101—H1011 | 121.8 | S205—C204—S206 | 113.33 (11) |
C114—C101—H1011 | 119.3 | Zn1—S205—C204 | 92.99 (7) |
Zn1—N102—C101 | 117.28 (15) | C204—S206—C207 | 103.81 (10) |
Zn1—N102—N103 | 123.99 (13) | S206—C207—C208 | 108.68 (14) |
C101—N102—N103 | 117.62 (18) | S206—C207—H2072 | 108.8 |
N102—N103—C104 | 111.73 (17) | C208—C207—H2072 | 111.1 |
N103—C104—S105 | 130.28 (16) | S206—C207—H2071 | 107.0 |
N103—C104—S106 | 116.92 (15) | C208—C207—H2071 | 110.5 |
S105—C104—S106 | 112.80 (12) | H2072—C207—H2071 | 110.6 |
Zn1—S105—C104 | 93.40 (7) | C207—C208—C209 | 120.9 (2) |
C104—S106—C107 | 104.10 (10) | C207—C208—C213 | 120.2 (2) |
S106—C107—C108 | 106.78 (15) | C209—C208—C213 | 118.9 (2) |
S106—C107—H1072 | 108.1 | C208—C209—C210 | 120.8 (2) |
C108—C107—H1072 | 110.3 | C208—C209—H2091 | 119.5 |
S106—C107—H1071 | 109.5 | C210—C209—H2091 | 119.6 |
C108—C107—H1071 | 110.0 | C209—C210—C211 | 119.9 (2) |
H1072—C107—H1071 | 112.1 | C209—C210—H2101 | 119.9 |
C107—C108—C109 | 122.0 (2) | C211—C210—H2101 | 120.2 |
C107—C108—C113 | 120.0 (2) | C210—C211—C212 | 119.8 (2) |
C109—C108—C113 | 118.0 (2) | C210—C211—H2111 | 119.9 |
C108—C109—C110 | 120.0 (2) | C212—C211—H2111 | 120.3 |
C108—C109—H1091 | 120.0 | C211—C212—C213 | 119.9 (2) |
C110—C109—H1091 | 120.0 | C211—C212—H2121 | 119.5 |
C109—C110—C111 | 120.3 (2) | C213—C212—H2121 | 120.6 |
C109—C110—H1101 | 120.2 | C208—C213—C212 | 120.6 (2) |
C111—C110—H1101 | 119.5 | C208—C213—H2131 | 118.8 |
C110—C111—C112 | 120.4 (2) | C212—C213—H2131 | 120.6 |
C110—C111—H1111 | 119.8 | C201—C214—N215 | 116.03 (17) |
C112—C111—H1111 | 119.8 | C201—C214—C219 | 121.28 (19) |
C111—C112—C113 | 120.2 (2) | N215—C214—C219 | 122.66 (19) |
C111—C112—H1121 | 121.1 | Zn1—N215—C214 | 112.14 (13) |
C113—C112—H1121 | 118.7 | Zn1—N215—C216 | 128.71 (14) |
C108—C113—C112 | 121.1 (2) | C214—N215—C216 | 118.77 (18) |
C108—C113—H1131 | 119.7 | N215—C216—C217 | 121.1 (2) |
C112—C113—H1131 | 119.2 | N215—C216—C220 | 117.64 (19) |
C101—C114—N115 | 116.19 (18) | C217—C216—C220 | 121.3 (2) |
C101—C114—C119 | 120.8 (2) | C216—C217—C218 | 120.0 (2) |
N115—C114—C119 | 123.0 (2) | C216—C217—H2171 | 118.6 |
Zn1—N115—C114 | 110.05 (13) | C218—C217—H2171 | 121.4 |
Zn1—N115—C116 | 131.44 (14) | C217—C218—C219 | 119.1 (2) |
C114—N115—C116 | 118.14 (17) | C217—C218—H2181 | 120.2 |
N115—C116—C117 | 121.1 (2) | C219—C218—H2181 | 120.7 |
N115—C116—C120 | 118.50 (18) | C214—C219—C218 | 118.4 (2) |
C117—C116—C120 | 120.42 (19) | C214—C219—H2191 | 120.5 |
C116—C117—C118 | 120.6 (2) | C218—C219—H2191 | 121.2 |
C116—C117—H1171 | 120.0 | C216—C220—H2202 | 110.7 |
C118—C117—H1171 | 119.4 | C216—C220—H2201 | 109.2 |
C117—C118—C119 | 118.6 (2) | H2202—C220—H2201 | 110.0 |
C117—C118—H1181 | 121.6 | C216—C220—H2203 | 109.1 |
C119—C118—H1181 | 119.8 | H2202—C220—H2203 | 110.1 |
C118—C119—C114 | 118.6 (2) | H2201—C220—H2203 | 107.7 |
C118—C119—H1191 | 121.7 |
D—H···A | D—H | H···A | D···A | D—H···A |
C217—H2171···S105i | 0.95 | 2.82 | 3.697 (3) | 155 |
Symmetry code: (i) −x, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C15H14N3S2)2] |
Mr | 666.24 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 150 |
a, b, c (Å) | 14.8931 (8), 13.0630 (5), 17.1706 (9) |
β (°) | 112.855 (6) |
V (Å3) | 3078.2 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.10 |
Crystal size (mm) | 0.24 × 0.18 × 0.16 |
Data collection | |
Diffractometer | Oxford Diffraction Gemini diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2011) |
Tmin, Tmax | 0.82, 0.84 |
No. of measured, independent and observed [I > 2.0σ(I)] reflections | 20496, 7140, 5960 |
Rint | 0.040 |
(sin θ/λ)max (Å−1) | 0.680 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.076, 1.00 |
No. of reflections | 7140 |
No. of parameters | 370 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.60, −0.44 |
Computer programs: Gemini User Manual (Oxford Diffraction, 2006), CrysAlis PRO (Agilent, 2011), SIR92 (Altomare et al., 1994), CRYSTALS (Betteridge et al., 2003), CAMERON (Watkin et al., 1996).
Zn1—N102 | 2.1032 (17) | Zn1—N202 | 2.1005 (16) |
Zn1—S105 | 2.4885 (6) | Zn1—S205 | 2.5263 (6) |
Zn1—N115 | 2.2692 (16) | Zn1—N215 | 2.2117 (17) |
D—H···A | D—H | H···A | D···A | D—H···A |
C217—H2171···S105i | 0.95 | 2.82 | 3.697 (3) | 155 |
Symmetry code: (i) −x, −y+1, −z. |
Acknowledgements
Support for this project came from Universiti Putra Malaysia (UPM) under their Research University Grant Scheme (RUGS No. 05–01–11–1243RU & RUGS No. 9174000), and the Malaysian Fundamental Research Grant Scheme (FRGS No. 01–03–11–986FR). SAO wishes to thank UPM for a Graduate Research Fellowship award.
References
Agilent (2011). CrysAlis PRO. Agilent Technologies, Yarnton, England. Google Scholar
Ali, M. A., Majumder, S. M. M., Butcher, R. J., Jasinski, J. P. & Jasinski, J. M. (1997). Polyhedron, 16(16), 2749–2754. CSD CrossRef Web of Science Google Scholar
Ali, M. A., Mirza, A. H., Butcher, R. J. & Tarafder, M. T. H. (2001). Inorg. Chim. Acta, 320, 1–6. Google Scholar
Altomare, A., Cascarano, G., Giacovazzo, C., Guagliardi, A., Burla, M. C., Polidori, G. & Camalli, M. (1994). J. Appl. Cryst. 27, 435. CrossRef Web of Science IUCr Journals Google Scholar
Betteridge, P. W., Carruthers, J. R., Cooper, R. I., Prout, K. & Watkin, D. J. (2003). J. Appl. Cryst. 36, 1487. Web of Science CrossRef IUCr Journals Google Scholar
Oxford Diffraction (2006). Gemini User Manual. Oxford Diffraction Ltd, Abingdon, Oxfordshire, England. Google Scholar
Ravoof, T. B. S. A., Crouse, K. A., Tahir, M. I. M., Cowley, A. R. & Ali, M. A. (2004). Polyhedron, 23, 2491–2498. Web of Science CSD CrossRef CAS Google Scholar
Ravoof, T. B. S. A., Crouse, K. A., Tahir, M. I. M., How, F. N. F., Rosli, R. & Watkins, D. J. (2010). Transition Met. Chem. 35, 871–876. Web of Science CSD CrossRef CAS Google Scholar
Tarafder, M. T. H., Kasbollah, A., Crouse, K. A., Ali, M. A., Yamin, B. M. & Fun, H.-K. (2001). Polyhedron, 20, 2363–2370. Web of Science CSD CrossRef CAS Google Scholar
Watkin, D. J., Prout, C. K. & Pearce, L. J. (1996). CAMERON. Chemical Crystallography Laboratory, University of Oxford, England. Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound was preferentially formed during the attempt to complex the tridentate Schiff base with zinc(II) saccharinate. The saccharinate anion was eliminated in this process and two tridentate deprotonated Schiff base moieties coordinated instead with the zinc(II) cation as determined by its infrared spectrum, elemental analysis and crystal structure analysis.
The bidentate ligands coordinate through their pyridine nitrogen, azomethine nitrogen and thiolate sulfur atoms. The environment around the ZnII ion is distorted octahedral (Fig. 1) with N—Zn—N, N—Zn—S and S—Zn—S angles between 75.40 (6)° and 162.87 (6)°. The deprotonation of the ligands is accompanied by their tautomerism to the iminothiolate forms. While coordinating in the iminothiolate form, the negative charge generated upon deprotonation is delocalized in the C—N—N—C system as observed by their intermediate bond lengths: C104—N103 = 1.311 (3) Å, N103—N102 = 1.384 (2) Å, N102—C101 = 1.276 (3) Å and C204—N203 = 1.311 (3) Å, N203—N202 =1.380 (3) Å, N202—C201 =1.281 (2) Å. Similar bond lengths and angles have been observed in the octahedral zinc(II) complex containing the pyridine-2-aldehyde Schiff base of S-benzyldithiocarbazate (Tarafder et al., 2001) for which C—N bond lengths ranging from 1.273 to 1.320 Å and N—N bond lengths of 1.374 to 1.379 Å were reported. In the title complex, the two ligands are coordinated to the zinc(II) ion in a meridional configuration, where the two thiolate S atoms (S105 & S205) and the two pyridine N atoms (N115 & N215) are cis to each other and the two azomethine N atoms trans (N102 & N202) as in other bis-ligand metal complexes of related NNS tridentate ligands (Tarafder et al., 2001). The angle between the planes defined by Zn1—S205—C204—N203—N202—C201—C214—N215 (minimum deviation: 0.001 and maximum deviation: 0.157 Å), and Zn1—S105—C104—N103 –N102—C101—C114—N115 (minimum deviation: 0.011 and maximum deviation: 0.212 Å) is 85.65 (5)° showing that the planes are almost orthogonal to each other thus defining an distorted octahedral arrangement.
The angle between the planes defined by the benzyl ring (C208—C213) and the pyridyl ring (C214—C219) is 84.39 (12)°; however, the angle between the planes defined by the corresponding benzyl (C108—C113) and pyridyl rings (C114—C119) in the other Schiff base moiety is 75.06 (12)°. Both planes of the benzyl ring moieties of the Schiff bases are slightly displaced at an angle of 15.05 (10)°, but the distance between them precludes π—π interaction. The pyridyl rings on both Schiff bases are almost orthogonal to each other at an angle of 85.06 (11)°.
The ZnII-donor atom bond lengths Zn—S [2.485 (6), 2.5263 (6) Å], Zn—Npy [2.2117 (17), 2.2692 (16) Å] and Zn—Nimine [2.1005 (16), 2.1032 (17) Å] compare well with a related octahedral ZnII complex containing a pyridine-2-aldehyde Schiff base of S-benzyldithiocarbazate with Zn—N distances between 2.126 and 2.347 Å and Zn—S distances between 2.4514 and 2.4540 Å which are normal for multidentate bonding (Tarafder et al., 2001). Although none of the bond angles in the complex conformed to the ideal values expected of a regular octahedral geometry, this appears to be common in six-coordinate metal complexes of Schiff base ligands derived from dithiocarbazic acid and is attributed to the restricted bite angles of the planar NNS tridentate ligands. (Ali et al., 2001; Tarafder et al., 2001). Weak C—H···S hydrogen bonds are observed and may consolidate the crystal packing (Fig. 2, Table 2).
Further background on the coordination chemistry of hydrazine carbodithioates is given by Ravoof et al. (2010).