metal-organic compounds
catena-Poly[[[aqua(pyrazine-2-carboxamide-κ2N1,O)zinc]-μ-pyrazine-2-carboxamide-κ3N1,O:N4] dinitrate]
aDepartment of Chemistry, Omidieh Branch, Islamic Azad University, Omidieh, Iran
*Correspondence e-mail: sadif.shirvan1@gmail.com
In the crystal of the title compound, {[Zn(C5H5N3O)2(H2O)](NO3)2}n, the ZnII cation is N,O-chelated by two pyrazine-2-carboxamide (PCA) ligands and is further coordinated by one water molecule and by one pyrazine-N atom from an adjacent PCA ligand in a distorted ZnN3O3 octahedral geometry. One of the two independent PCA ligands bridges two ZnII cations, forming a zigzag polymeric chain running along the c axis. In the crystal, the NO3− anions link to the chain via O—H⋯O and N—H⋯O hydrogen bonding. Weak intermolecular C—H⋯O interactions also occur.
Related literature
For related structures, see: Shirvan & Haydari Dezfuli (2012); Abu-Youssef et al. (2006); Azhdari Tehrani et al. (2010); Goher & Mautner (2000); Kristiansson (2002); Mir Mohammad Sadegh et al. (2010); Munakata et al. (1997); Pacigova et al. (2008).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812016017/xu5508sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812016017/xu5508Isup2.hkl
A solution of pyrazine-2-carboxamide (0.25 g, 2.0 mmol) in methanol (10 ml) was added to a solution of Zn(NO3)2.4H2O (0.26 g, 1.0 mmol) in methanol (10 ml) and the resulting colorless solution was stirred for 15 min at room temperature. This solution was left to evaporate slowly at room temperature. After one week, colorless block crystals of the title compound were isolated (yield 0.36 g, 79.3%).
Water H atoms were located in a difference Fourier map and refined isotropically. Other H atoms were positioned geometrically with C—H = 0.93 and N—H = 0.86 Å, and constrained to ride on their parent atoms with Uiso(H) = 1.2Ueq(N,C).
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. [Symmetry codes: (b) x,3/2 - y,1/2 + z]. | |
Fig. 2. Unit-cell packing diagram for title molecule. Hydrogen bonds are shown as dashed lines. |
[Zn(C5H5N3O)2(H2O)](NO3)2 | F(000) = 920 |
Mr = 453.67 | Dx = 1.853 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 9288 reflections |
a = 10.4889 (11) Å | θ = 2.4–26.0° |
b = 15.7477 (16) Å | µ = 1.58 mm−1 |
c = 9.9332 (10) Å | T = 298 K |
β = 97.664 (8)° | Block, colorless |
V = 1626.1 (3) Å3 | 0.23 × 0.12 × 0.10 mm |
Z = 4 |
Bruker APEXII CCD area detector diffractometer | 3192 independent reflections |
Radiation source: fine-focus sealed tube | 2088 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.123 |
ω scans | θmax = 26.0°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −12→12 |
Tmin = 0.070, Tmax = 0.240 | k = −19→19 |
9288 measured reflections | l = −12→11 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.076 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.103 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0237P)2] where P = (Fo2 + 2Fc2)/3 |
3192 reflections | (Δ/σ)max = 0.006 |
261 parameters | Δρmax = 0.46 e Å−3 |
0 restraints | Δρmin = −0.52 e Å−3 |
[Zn(C5H5N3O)2(H2O)](NO3)2 | V = 1626.1 (3) Å3 |
Mr = 453.67 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.4889 (11) Å | µ = 1.58 mm−1 |
b = 15.7477 (16) Å | T = 298 K |
c = 9.9332 (10) Å | 0.23 × 0.12 × 0.10 mm |
β = 97.664 (8)° |
Bruker APEXII CCD area detector diffractometer | 3192 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 2088 reflections with I > 2σ(I) |
Tmin = 0.070, Tmax = 0.240 | Rint = 0.123 |
9288 measured reflections |
R[F2 > 2σ(F2)] = 0.076 | 0 restraints |
wR(F2) = 0.103 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.46 e Å−3 |
3192 reflections | Δρmin = −0.52 e Å−3 |
261 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.7871 (6) | 0.4587 (4) | 0.1320 (7) | 0.0329 (15) | |
H1 | 0.8748 | 0.4701 | 0.1417 | 0.039* | |
C2 | 0.7334 (6) | 0.4048 (5) | 0.0291 (7) | 0.0445 (17) | |
H2 | 0.7859 | 0.3819 | −0.0300 | 0.053* | |
C3 | 0.5393 (6) | 0.4184 (4) | 0.1012 (7) | 0.0387 (16) | |
H3 | 0.4526 | 0.4043 | 0.0946 | 0.046* | |
C4 | 0.5906 (5) | 0.4738 (3) | 0.2038 (6) | 0.0210 (12) | |
C5 | 0.5169 (5) | 0.5161 (3) | 0.3017 (6) | 0.0237 (13) | |
C6 | 0.6418 (5) | 0.7234 (4) | 0.1580 (7) | 0.0248 (14) | |
H6 | 0.5624 | 0.7048 | 0.1782 | 0.030* | |
C7 | 0.6463 (5) | 0.7868 (4) | 0.0610 (7) | 0.0292 (15) | |
H7 | 0.5699 | 0.8084 | 0.0154 | 0.035* | |
C8 | 0.8651 (5) | 0.7831 (3) | 0.0990 (6) | 0.0240 (14) | |
H8 | 0.9445 | 0.8033 | 0.0814 | 0.029* | |
C9 | 0.8615 (5) | 0.7189 (3) | 0.1932 (6) | 0.0189 (12) | |
C10 | 0.9758 (5) | 0.6759 (3) | 0.2712 (6) | 0.0207 (13) | |
N1 | 0.7158 (4) | 0.4940 (3) | 0.2159 (5) | 0.0246 (12) | |
N2 | 0.6089 (5) | 0.3848 (4) | 0.0128 (6) | 0.0483 (16) | |
N3 | 0.3939 (5) | 0.5002 (3) | 0.3014 (6) | 0.0366 (14) | |
H3D | 0.3515 | 0.5264 | 0.3571 | 0.044* | |
H3E | 0.3558 | 0.4637 | 0.2454 | 0.044* | |
N4 | 0.7479 (4) | 0.6893 (3) | 0.2219 (5) | 0.0228 (12) | |
N5 | 0.7584 (4) | 0.8170 (3) | 0.0325 (5) | 0.0225 (11) | |
N6 | 1.0915 (4) | 0.7048 (3) | 0.2613 (5) | 0.0317 (13) | |
H6C | 1.1576 | 0.6814 | 0.3071 | 0.038* | |
H6B | 1.1012 | 0.7472 | 0.2090 | 0.038* | |
N7 | 0.7146 (5) | 0.3192 (3) | 0.4190 (7) | 0.0350 (13) | |
N8 | 0.1273 (5) | 0.4024 (4) | 0.1241 (6) | 0.0361 (13) | |
O1 | 0.5749 (3) | 0.5684 (2) | 0.3812 (4) | 0.0300 (11) | |
O2 | 0.9561 (3) | 0.6152 (2) | 0.3448 (4) | 0.0252 (9) | |
O3 | 0.8371 (5) | 0.5012 (4) | 0.5193 (6) | 0.0397 (13) | |
H3C | 0.850 (7) | 0.456 (4) | 0.503 (8) | 0.04 (3)* | |
H3B | 0.853 (6) | 0.510 (4) | 0.595 (7) | 0.03 (2)* | |
O4 | 0.8335 (4) | 0.3362 (3) | 0.4190 (5) | 0.0437 (12) | |
O5 | 0.6640 (5) | 0.3426 (4) | 0.5181 (7) | 0.080 (2) | |
O6 | 0.6571 (5) | 0.2815 (4) | 0.3235 (6) | 0.0633 (16) | |
O7 | 0.2393 (5) | 0.3816 (3) | 0.1188 (7) | 0.0622 (15) | |
O8 | 0.1027 (5) | 0.4586 (4) | 0.2039 (6) | 0.0669 (17) | |
O9 | 0.0400 (5) | 0.3687 (4) | 0.0522 (8) | 0.098 (3) | |
Zn1 | 0.76855 (6) | 0.58798 (4) | 0.37477 (7) | 0.02037 (17) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.021 (3) | 0.037 (3) | 0.042 (4) | 0.001 (3) | 0.007 (3) | −0.005 (3) |
C2 | 0.044 (4) | 0.049 (4) | 0.041 (4) | 0.003 (4) | 0.008 (3) | −0.020 (4) |
C3 | 0.030 (3) | 0.048 (4) | 0.038 (4) | −0.012 (3) | 0.004 (3) | −0.020 (4) |
C4 | 0.020 (3) | 0.028 (3) | 0.015 (3) | −0.003 (2) | 0.000 (2) | −0.001 (3) |
C5 | 0.023 (3) | 0.023 (3) | 0.025 (4) | −0.003 (2) | −0.001 (3) | 0.005 (3) |
C6 | 0.018 (3) | 0.025 (3) | 0.033 (4) | −0.004 (2) | 0.007 (3) | 0.006 (3) |
C7 | 0.013 (3) | 0.035 (4) | 0.039 (4) | 0.001 (2) | 0.001 (3) | 0.003 (3) |
C8 | 0.021 (3) | 0.019 (3) | 0.033 (4) | 0.001 (2) | 0.007 (3) | −0.001 (3) |
C9 | 0.017 (3) | 0.020 (3) | 0.018 (3) | −0.002 (2) | 0.001 (2) | −0.001 (2) |
C10 | 0.022 (3) | 0.021 (3) | 0.020 (3) | 0.003 (2) | 0.004 (2) | −0.004 (3) |
N1 | 0.021 (2) | 0.030 (3) | 0.023 (3) | −0.001 (2) | 0.003 (2) | 0.003 (2) |
N2 | 0.038 (3) | 0.060 (4) | 0.046 (4) | −0.004 (3) | 0.003 (3) | −0.021 (3) |
N3 | 0.023 (3) | 0.052 (3) | 0.035 (4) | −0.004 (2) | 0.009 (2) | −0.011 (3) |
N4 | 0.020 (2) | 0.020 (3) | 0.029 (3) | 0.000 (2) | 0.006 (2) | 0.003 (2) |
N5 | 0.022 (2) | 0.024 (2) | 0.021 (3) | 0.005 (2) | 0.004 (2) | −0.002 (2) |
N6 | 0.015 (2) | 0.039 (3) | 0.041 (4) | 0.001 (2) | 0.003 (2) | 0.017 (3) |
N7 | 0.027 (3) | 0.025 (3) | 0.053 (4) | 0.002 (2) | 0.004 (3) | −0.004 (3) |
N8 | 0.030 (3) | 0.035 (3) | 0.042 (4) | 0.003 (3) | 0.002 (3) | 0.001 (3) |
O1 | 0.022 (2) | 0.034 (3) | 0.035 (3) | −0.0099 (18) | 0.0051 (19) | −0.017 (2) |
O2 | 0.020 (2) | 0.025 (2) | 0.031 (3) | 0.0002 (16) | 0.0029 (18) | 0.0098 (18) |
O3 | 0.053 (3) | 0.034 (3) | 0.030 (4) | 0.009 (3) | 0.000 (3) | 0.005 (3) |
O4 | 0.024 (2) | 0.052 (3) | 0.056 (4) | 0.001 (2) | 0.007 (2) | −0.017 (3) |
O5 | 0.063 (4) | 0.087 (4) | 0.103 (5) | −0.015 (3) | 0.057 (4) | −0.041 (4) |
O6 | 0.045 (3) | 0.077 (4) | 0.063 (4) | −0.022 (3) | −0.009 (3) | −0.006 (3) |
O7 | 0.028 (3) | 0.065 (3) | 0.094 (4) | −0.006 (3) | 0.010 (3) | −0.022 (3) |
O8 | 0.052 (3) | 0.088 (4) | 0.056 (4) | 0.018 (3) | −0.009 (3) | −0.039 (3) |
O9 | 0.026 (3) | 0.135 (6) | 0.127 (6) | 0.003 (3) | −0.007 (3) | −0.092 (5) |
Zn1 | 0.0182 (3) | 0.0208 (3) | 0.0216 (3) | −0.0026 (3) | 0.0009 (2) | −0.0004 (4) |
Zn1—O1 | 2.064 (3) | N4—C9 | 1.345 (7) |
Zn1—O2 | 2.073 (3) | N4—C6 | 1.320 (7) |
Zn1—O3 | 2.042 (6) | N5—C8 | 1.333 (7) |
Zn1—N1 | 2.180 (5) | N5—C7 | 1.333 (7) |
Zn1—N4 | 2.193 (5) | N6—C10 | 1.312 (7) |
Zn1—N5i | 2.179 (5) | N3—H3E | 0.8600 |
O1—C5 | 1.243 (6) | N3—H3D | 0.8600 |
O2—C10 | 1.237 (6) | N6—H6B | 0.8600 |
O3—H3B | 0.76 (7) | N6—H6C | 0.8600 |
O3—H3C | 0.75 (6) | C1—C2 | 1.389 (10) |
O4—N7 | 1.276 (7) | C3—C4 | 1.394 (9) |
O5—N7 | 1.235 (9) | C4—C5 | 1.479 (8) |
O6—N7 | 1.210 (9) | C6—C7 | 1.393 (9) |
O7—N8 | 1.227 (8) | C8—C9 | 1.382 (7) |
O8—N8 | 1.238 (9) | C9—C10 | 1.500 (8) |
O9—N8 | 1.207 (9) | C1—H1 | 0.9300 |
N1—C4 | 1.341 (7) | C2—H2 | 0.9300 |
N1—C1 | 1.315 (8) | C3—H3 | 0.9300 |
N2—C2 | 1.332 (8) | C6—H6 | 0.9300 |
N2—C3 | 1.325 (9) | C7—H7 | 0.9300 |
N3—C5 | 1.314 (7) | C8—H8 | 0.9300 |
Zn1···H3Dii | 3.5800 | N4···C10 | 2.385 (7) |
O1···O3 | 3.092 (6) | N4···N5i | 3.074 (7) |
O1···N1 | 2.627 (6) | N5···N4viii | 3.074 (7) |
O1···N4 | 3.192 (6) | N5···O3viii | 2.987 (8) |
O1···C4 | 2.330 (7) | N5···O1viii | 2.907 (6) |
O1···O5ii | 3.148 (7) | N5···N4 | 2.766 (7) |
O1···N5i | 2.907 (6) | N5···O2viii | 3.154 (6) |
O1···C7i | 2.932 (7) | N6···O6ix | 3.117 (7) |
O2···C9 | 2.350 (6) | N6···O4ix | 2.913 (7) |
O2···O3 | 2.892 (7) | N6···O4iii | 3.233 (7) |
O2···N4 | 2.629 (6) | N6···O5iii | 3.231 (8) |
O2···C8i | 3.240 (7) | N7···C4 | 3.383 (8) |
O2···O3iii | 3.018 (7) | N7···O3 | 3.243 (8) |
O2···O4iii | 3.095 (6) | N8···C8v | 3.323 (8) |
O2···N5i | 3.154 (6) | N8···C9v | 3.406 (8) |
O3···N1 | 3.113 (8) | N2···H6vii | 2.8100 |
O3···O5 | 3.087 (8) | N3···H3Bii | 2.92 (6) |
O3···N5i | 2.987 (8) | N3···H3 | 2.6900 |
O3···O2iii | 3.018 (7) | N5···H3Bviii | 2.94 (6) |
O3···O1 | 3.092 (6) | N6···H8 | 2.6900 |
O3···O2 | 2.892 (7) | N7···H6Ciii | 2.8700 |
O3···O4 | 2.781 (8) | N7···H3C | 2.65 (7) |
O3···O8ii | 2.810 (8) | N7···H6Biv | 2.7000 |
O3···N7 | 3.243 (8) | N8···H1vi | 2.8800 |
O3···N3ii | 3.193 (8) | N8···H3E | 2.7100 |
O4···O3 | 2.781 (8) | C1···O9x | 3.199 (9) |
O4···C8iv | 3.298 (7) | C1···O8x | 3.292 (8) |
O4···N6iii | 3.233 (7) | C2···O9x | 3.244 (8) |
O4···O2iii | 3.095 (6) | C3···O6 | 3.213 (9) |
O4···N6iv | 2.913 (7) | C3···O7 | 3.227 (8) |
O5···C7v | 3.362 (8) | C3···C4vii | 3.580 (9) |
O5···N6iii | 3.231 (8) | C3···C3vii | 3.299 (9) |
O5···N3ii | 3.163 (8) | C4···C3vii | 3.580 (9) |
O5···O1ii | 3.148 (7) | C4···O6 | 3.294 (8) |
O5···O3 | 3.087 (8) | C4···N7 | 3.383 (8) |
O6···N6iv | 3.117 (7) | C6···N2vii | 3.392 (8) |
O6···C4 | 3.294 (8) | C6···O6xi | 3.295 (8) |
O6···C3 | 3.213 (9) | C7···O5xi | 3.362 (8) |
O6···C6v | 3.295 (8) | C8···N8xi | 3.323 (8) |
O7···C3 | 3.227 (8) | C8···O9vii | 3.059 (8) |
O7···N3 | 2.937 (8) | C8···O8xi | 3.378 (8) |
O8···C8v | 3.378 (8) | C8···O4ix | 3.298 (7) |
O8···C1vi | 3.292 (8) | C9···N8xi | 3.406 (8) |
O8···N3 | 3.148 (8) | C9···O9vii | 3.096 (9) |
O8···O3ii | 2.810 (8) | C10···O9vii | 3.271 (10) |
O9···C9vii | 3.096 (9) | C3···H3E | 2.6500 |
O9···C2vi | 3.244 (8) | C8···H6B | 2.6300 |
O9···C8vii | 3.059 (8) | H1···O8x | 2.3900 |
O9···C1vi | 3.199 (9) | H1···O9x | 2.6000 |
O9···C10vii | 3.271 (10) | H1···N8x | 2.8800 |
O1···H7i | 2.3600 | H2···O9x | 2.6900 |
O2···H3Ciii | 2.62 (7) | H3···N3 | 2.6900 |
O2···H3Biii | 2.82 (6) | H3···H3E | 2.1300 |
O2···H8i | 2.6900 | H3···O7 | 2.3100 |
O3···H3Dii | 2.5000 | H3B···O2iii | 2.82 (6) |
O4···H3C | 2.06 (7) | H3B···H3Dii | 2.3300 |
O4···H6Ciii | 2.7200 | H3B···O8ii | 2.05 (7) |
O4···H6Biv | 2.0700 | H3B···N3ii | 2.92 (6) |
O4···H8iv | 2.3900 | H3C···O5 | 2.66 (7) |
O5···H3C | 2.66 (7) | H3C···O4 | 2.06 (7) |
O5···H6Ciii | 2.4100 | H3C···N7 | 2.65 (7) |
O5···H7v | 2.4900 | H3C···O2iii | 2.62 (7) |
O5···H3Dii | 2.4200 | H3D···Zn1ii | 3.5800 |
O6···H6v | 2.6000 | H3D···H3Bii | 2.3300 |
O6···H6Biv | 2.6500 | H3D···O3ii | 2.5000 |
O7···H3 | 2.3100 | H3D···O5ii | 2.4200 |
O7···H3E | 2.0800 | H3E···O7 | 2.0800 |
O8···H3E | 2.6300 | H3E···O8 | 2.6300 |
O8···H1vi | 2.3900 | H3E···N8 | 2.7100 |
O8···H3Bii | 2.05 (7) | H3E···C3 | 2.6500 |
O9···H2vi | 2.6900 | H3E···H3 | 2.1300 |
O9···H1vi | 2.6000 | H6···N2vii | 2.8100 |
N1···C5 | 2.382 (7) | H6···O6xi | 2.6000 |
N1···O1 | 2.627 (6) | H6B···O6ix | 2.6500 |
N1···N2 | 2.772 (8) | H6B···O4ix | 2.0700 |
N1···N4 | 3.094 (7) | H6B···N7ix | 2.7000 |
N1···O3 | 3.113 (8) | H6B···H8 | 2.1300 |
N2···N1 | 2.772 (8) | H6B···C8 | 2.6300 |
N2···C6vii | 3.392 (8) | H6C···O5iii | 2.4100 |
N3···O5ii | 3.163 (8) | H6C···O4iii | 2.7200 |
N3···O7 | 2.937 (8) | H6C···N7iii | 2.8700 |
N3···O3ii | 3.193 (8) | H7···O5xi | 2.4900 |
N3···O8 | 3.148 (8) | H7···O1viii | 2.3600 |
N4···N1 | 3.094 (7) | H8···O4ix | 2.3900 |
N4···O1 | 3.192 (6) | H8···O2viii | 2.6900 |
N4···O2 | 2.629 (6) | H8···N6 | 2.6900 |
N4···N5 | 2.766 (7) | H8···H6B | 2.1300 |
O1—Zn1—O2 | 172.71 (15) | O4—N7—O5 | 117.5 (6) |
O1—Zn1—O3 | 97.70 (18) | O4—N7—O6 | 119.2 (6) |
O1—Zn1—N1 | 76.42 (15) | O5—N7—O6 | 123.3 (6) |
O1—Zn1—N4 | 97.09 (15) | O8—N8—O9 | 119.1 (6) |
O1—Zn1—N5i | 86.43 (15) | O7—N8—O8 | 120.0 (6) |
O2—Zn1—O3 | 89.28 (18) | O7—N8—O9 | 120.8 (6) |
O2—Zn1—N1 | 100.98 (15) | N1—C1—C2 | 121.0 (6) |
O2—Zn1—N4 | 76.01 (15) | N2—C2—C1 | 121.9 (6) |
O2—Zn1—N5i | 95.71 (15) | N2—C3—C4 | 122.8 (6) |
O3—Zn1—N1 | 94.9 (2) | C3—C4—C5 | 125.3 (5) |
O3—Zn1—N4 | 165.13 (19) | N1—C4—C5 | 115.2 (5) |
O3—Zn1—N5i | 90.0 (2) | N1—C4—C3 | 119.5 (5) |
N1—Zn1—N4 | 90.03 (18) | O1—C5—C4 | 117.5 (5) |
N1—Zn1—N5i | 162.62 (16) | O1—C5—N3 | 121.7 (5) |
N4—Zn1—N5i | 89.34 (18) | N3—C5—C4 | 120.8 (5) |
Zn1—O1—C5 | 118.7 (3) | N4—C6—C7 | 121.4 (5) |
Zn1—O2—C10 | 118.8 (3) | N5—C7—C6 | 121.0 (5) |
H3B—O3—H3C | 112 (8) | N5—C8—C9 | 122.1 (5) |
Zn1—O3—H3C | 123 (6) | C8—C9—C10 | 126.0 (5) |
Zn1—O3—H3B | 126 (5) | N4—C9—C10 | 113.8 (5) |
C1—N1—C4 | 118.4 (5) | N4—C9—C8 | 120.2 (5) |
Zn1—N1—C4 | 112.1 (4) | O2—C10—C9 | 118.0 (5) |
Zn1—N1—C1 | 129.4 (4) | N6—C10—C9 | 119.2 (5) |
C2—N2—C3 | 116.3 (6) | O2—C10—N6 | 122.8 (5) |
Zn1—N4—C6 | 128.9 (4) | C2—C1—H1 | 120.00 |
Zn1—N4—C9 | 113.0 (3) | N1—C1—H1 | 119.00 |
C6—N4—C9 | 118.1 (5) | N2—C2—H2 | 119.00 |
Zn1viii—N5—C8 | 120.9 (4) | C1—C2—H2 | 119.00 |
C7—N5—C8 | 117.3 (5) | N2—C3—H3 | 119.00 |
Zn1viii—N5—C7 | 121.8 (4) | C4—C3—H3 | 119.00 |
C5—N3—H3E | 120.00 | C7—C6—H6 | 119.00 |
H3D—N3—H3E | 120.00 | N4—C6—H6 | 119.00 |
C5—N3—H3D | 120.00 | N5—C7—H7 | 120.00 |
C10—N6—H6B | 120.00 | C6—C7—H7 | 119.00 |
C10—N6—H6C | 120.00 | C9—C8—H8 | 119.00 |
H6B—N6—H6C | 120.00 | N5—C8—H8 | 119.00 |
O3—Zn1—O1—C5 | −92.4 (4) | Zn1—O2—C10—N6 | 170.5 (4) |
N1—Zn1—O1—C5 | 0.9 (4) | Zn1—O2—C10—C9 | −8.1 (6) |
N4—Zn1—O1—C5 | 89.2 (4) | Zn1—N1—C4—C5 | −2.1 (6) |
N5i—Zn1—O1—C5 | 178.1 (4) | C1—N1—C4—C3 | −1.8 (8) |
O3—Zn1—O2—C10 | −171.7 (4) | C4—N1—C1—C2 | 3.0 (9) |
N1—Zn1—O2—C10 | 93.4 (4) | Zn1—N1—C4—C3 | 176.1 (4) |
N4—Zn1—O2—C10 | 6.2 (4) | Zn1—N1—C1—C2 | −174.5 (5) |
N5i—Zn1—O2—C10 | −81.7 (4) | C1—N1—C4—C5 | −180.0 (5) |
O1—Zn1—N1—C1 | 178.4 (6) | C2—N2—C3—C4 | 1.9 (10) |
O2—Zn1—N1—C1 | 5.4 (6) | C3—N2—C2—C1 | −0.8 (10) |
O3—Zn1—N1—C1 | −84.9 (5) | Zn1—N4—C9—C8 | −179.9 (4) |
N4—Zn1—N1—C1 | 81.1 (5) | Zn1—N4—C6—C7 | −178.8 (5) |
O1—Zn1—N1—C4 | 0.8 (4) | C6—N4—C9—C10 | −180.0 (5) |
O2—Zn1—N1—C4 | −172.3 (4) | Zn1—N4—C9—C10 | 0.3 (6) |
O3—Zn1—N1—C4 | 97.5 (4) | C6—N4—C9—C8 | −0.1 (8) |
N4—Zn1—N1—C4 | −96.5 (4) | C9—N4—C6—C7 | 1.6 (9) |
O1—Zn1—N4—C6 | −0.4 (5) | C8—N5—C7—C6 | 1.0 (9) |
O2—Zn1—N4—C6 | 177.3 (6) | Zn1viii—N5—C7—C6 | 177.2 (5) |
N1—Zn1—N4—C6 | 76.0 (5) | Zn1viii—N5—C8—C9 | −175.8 (4) |
N5i—Zn1—N4—C6 | −86.7 (5) | C7—N5—C8—C9 | 0.4 (8) |
O1—Zn1—N4—C9 | 179.3 (4) | N1—C1—C2—N2 | −1.7 (11) |
O2—Zn1—N4—C9 | −3.0 (4) | N2—C3—C4—C5 | 177.3 (6) |
N1—Zn1—N4—C9 | −104.3 (4) | N2—C3—C4—N1 | −0.7 (9) |
N5i—Zn1—N4—C9 | 93.0 (4) | N1—C4—C5—N3 | −178.8 (5) |
O1viii—Zn1viii—N5—C7 | 14.9 (5) | N1—C4—C5—O1 | 3.0 (7) |
O2viii—Zn1viii—N5—C7 | −158.1 (5) | C3—C4—C5—N3 | 3.2 (9) |
O3viii—Zn1viii—N5—C7 | 112.6 (5) | C3—C4—C5—O1 | −175.1 (5) |
N4viii—Zn1viii—N5—C7 | −82.2 (5) | N4—C6—C7—N5 | −2.1 (10) |
O1viii—Zn1viii—N5—C8 | −169.1 (4) | N5—C8—C9—N4 | −0.9 (8) |
O2viii—Zn1viii—N5—C8 | 17.9 (4) | N5—C8—C9—C10 | 178.9 (5) |
O3viii—Zn1viii—N5—C8 | −71.4 (4) | N4—C9—C10—O2 | 5.0 (7) |
N4viii—Zn1viii—N5—C8 | 93.8 (4) | C8—C9—C10—N6 | 6.5 (8) |
Zn1—O1—C5—N3 | 179.4 (4) | N4—C9—C10—N6 | −173.6 (5) |
Zn1—O1—C5—C4 | −2.3 (6) | C8—C9—C10—O2 | −174.9 (5) |
Symmetry codes: (i) x, −y+3/2, z+1/2; (ii) −x+1, −y+1, −z+1; (iii) −x+2, −y+1, −z+1; (iv) −x+2, y−1/2, −z+1/2; (v) −x+1, y−1/2, −z+1/2; (vi) x−1, y, z; (vii) −x+1, −y+1, −z; (viii) x, −y+3/2, z−1/2; (ix) −x+2, y+1/2, −z+1/2; (x) x+1, y, z; (xi) −x+1, y+1/2, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3B···O8ii | 0.76 (7) | 2.05 (7) | 2.810 (8) | 177 (7) |
O3—H3C···O4 | 0.75 (6) | 2.06 (7) | 2.781 (8) | 162 (9) |
N3—H3D···O3ii | 0.86 | 2.50 | 3.193 (8) | 138 |
N3—H3D···O5ii | 0.86 | 2.42 | 3.163 (8) | 144 |
N3—H3E···O7 | 0.86 | 2.08 | 2.937 (8) | 172 |
N6—H6B···O4ix | 0.86 | 2.07 | 2.913 (7) | 166 |
N6—H6C···O5iii | 0.86 | 2.41 | 3.231 (8) | 161 |
C1—H1···O8x | 0.93 | 2.39 | 3.292 (8) | 162 |
C3—H3···O7 | 0.93 | 2.31 | 3.227 (8) | 169 |
C6—H6···O6xi | 0.93 | 2.60 | 3.295 (8) | 132 |
C7—H7···O5xi | 0.93 | 2.49 | 3.362 (8) | 156 |
C8—H8···O4ix | 0.93 | 2.39 | 3.298 (7) | 167 |
Symmetry codes: (ii) −x+1, −y+1, −z+1; (iii) −x+2, −y+1, −z+1; (ix) −x+2, y+1/2, −z+1/2; (x) x+1, y, z; (xi) −x+1, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C5H5N3O)2(H2O)](NO3)2 |
Mr | 453.67 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 10.4889 (11), 15.7477 (16), 9.9332 (10) |
β (°) | 97.664 (8) |
V (Å3) | 1626.1 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.58 |
Crystal size (mm) | 0.23 × 0.12 × 0.10 |
Data collection | |
Diffractometer | Bruker APEXII CCD area detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.070, 0.240 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9288, 3192, 2088 |
Rint | 0.123 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.076, 0.103, 1.06 |
No. of reflections | 3192 |
No. of parameters | 261 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.46, −0.52 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXTL (Sheldrick, 2008).
Zn1—O1 | 2.064 (3) | Zn1—N1 | 2.180 (5) |
Zn1—O2 | 2.073 (3) | Zn1—N4 | 2.193 (5) |
Zn1—O3 | 2.042 (6) | Zn1—N5i | 2.179 (5) |
Symmetry code: (i) x, −y+3/2, z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3B···O8ii | 0.76 (7) | 2.05 (7) | 2.810 (8) | 177 (7) |
O3—H3C···O4 | 0.75 (6) | 2.06 (7) | 2.781 (8) | 162 (9) |
N3—H3D···O3ii | 0.86 | 2.5000 | 3.193 (8) | 138 |
N3—H3D···O5ii | 0.86 | 2.4200 | 3.163 (8) | 144 |
N3—H3E···O7 | 0.86 | 2.0800 | 2.937 (8) | 172 |
N6—H6B···O4iii | 0.86 | 2.0700 | 2.913 (7) | 166 |
N6—H6C···O5iv | 0.86 | 2.4100 | 3.231 (8) | 161 |
C1—H1···O8v | 0.93 | 2.3900 | 3.292 (8) | 162 |
C3—H3···O7 | 0.93 | 2.3100 | 3.227 (8) | 169 |
C6—H6···O6vi | 0.93 | 2.6000 | 3.295 (8) | 132 |
C7—H7···O5vi | 0.93 | 2.4900 | 3.362 (8) | 156 |
C8—H8···O4iii | 0.93 | 2.3900 | 3.298 (7) | 167 |
Symmetry codes: (ii) −x+1, −y+1, −z+1; (iii) −x+2, y+1/2, −z+1/2; (iv) −x+2, −y+1, −z+1; (v) x+1, y, z; (vi) −x+1, y+1/2, −z+1/2. |
Acknowledgements
We are grateful to the Islamic Azad University, Omidieh Branch for financial support.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
In a recent paper, we reported the synthesis and crystal structure of [ZnBr2(pzc)2] (Shirvan & Haydari Dezfuli, 2012), where pzc is the pyrazine-2-carboxamide. Pyrazine-2-carboxamide is a good ligand, and a few complexes with pzc have been prepared, such as that of mercury (Azhdari Tehrani et al., 2010; Mir Mohammad Sadegh et al., 2010) and vanadium (Pacigova et al., 2008), manganese (Abu-Youssef et al., 2006) and copper (Kristiansson, 2002; Munakata et al., 1997; Goher & Mautner, 2000). Here, we report the synthesis and structure of the title compound.
The asymmetric unit of the title compound, (Fig. 1), contains one ZnII cation, two pyrazine-2-carboxamide ligands, one water molecule and two NO3- counter-ions. The ZnII atom is six-coordinated in a distorted octahedral configuration by two N and two O atoms from two pyrazine-2-carboxamide ligands and one O atom from one water molecule. The sixth coordination site is occupied by N atom from one bridging pyrazine-2-carboxamide ligand. The Zn—O and Zn—N bond lengths and angles are collected in Table 1.
In the crystal structure, intra and intermolecular O—H···O, N—H···O and C—H···O hydrogen bonds (Table 2, Fig. 2) may stabilize the structure.