metal-organic compounds
Aquabis[N′-(1,3-dithiolan-2-ylidene)-2-hydroxybenzohydrazidato(0.5−)-κ2N′,O]sodium(I)
aUnité de Recherche de Chimie de l'Environnement et Moléculaire Structurale (CHEMS), Faculté des Sciences Exactes, Département de Chimie, Université Mentouri, 25000 Constantine, Algeria
*Correspondence e-mail: a_beghidja@yahoo.fr
The title compound, [Na(C10H9.5N2O2S2)2(H2O)], is a molecular sodium complex with N′-(1,3-dithiolan-2-yl)-2-hydroxybenzohydrazide ligands with the negative charge spread evenly over both, and a water molecule. The NaI ion coordination is distorted trigonal–bipyramidal, formed by two N and three O atoms, with the NaI ion lying on a twofold rotation axis. Intramolecular N—H⋯O hydrogen bonds occur. Molecules pack as discrete units and the crystal packing is stabilized by strong O—H⋯O hydrogen bonds, which give rise to chains along [010]; the chains are interlinked by strong O—H⋯O hydrogen bonds.
Related literature
For general background to the 2-salicylihydrazono-1,3-dithiolane ligand (H2L) and its metal complexes, see: Beghidja et al. (2005, 2006); Bouchameni et al. (2011). For background to dithiocarbazates, see: Wang et al. (2002); Zhou et al. (2007) and for their biological activity, see: Tarafder et al. (2000, 2001).
Experimental
Crystal data
|
Data collection
|
|
Data collection: COLLECT (Nonius, 1998); cell SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536812023239/bq2359sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812023239/bq2359Isup2.hkl
The reaction of H2L (0.05 g, 2 x 10 -4 mol) with Mn(OH)3 (0.0106 g, 10 -4 mol) and NaOH (0.01 g, 2 x 10 -4 mol) in ethanol solution leads to a yellow solution which was left to stand undisturbed at room temperature. Several days later, x-ray quality colorless single crystals were obtained by slow evaporation, which were filtrated and characterized.
The positions of the H atoms of the water molecule and hydroxyl group were located in the electron density maps; other H atoms were placed in calculated positions and refined as riding with C—H = 0.95 Å, Uiso = 1.2Ueq(C) for aromatic groups; N—H = 0.86 Å, Uiso = 1.2Ueq(N); O—H = 0.90-0.95 Å, Uiso = 1.5Ueq(O).
Data collection: COLLECT (Nonius, 1998); cell
SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).[Na(C10H9.5N2O2S2)2(H2O)] | F(000) = 568 |
Mr = 548.68 | Dx = 1.538 Mg m−3 |
Monoclinic, C2 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C 2y | Cell parameters from 2559 reflections |
a = 16.6960 (16) Å | θ = 1.0–27.5° |
b = 5.9330 (3) Å | µ = 0.46 mm−1 |
c = 13.5240 (12) Å | T = 298 K |
β = 117.804 (3)° | Plates, colorless |
V = 1184.99 (17) Å3 | 0.14 × 0.10 × 0.08 mm |
Z = 2 |
Nonius KappaCCD diffractometer | 2083 reflections with I > 2σ(I) |
Radiation source: Rotating Anode | Rint = 0.050 |
Horizonally mounted graphite crystal monochromator | θmax = 27.5°, θmin = 1.7° |
Detector resolution: 9 pixels mm-1 | h = −21→21 |
ϕ scans, and ω scans with κ offsets | k = −6→7 |
3660 measured reflections | l = −13→17 |
2463 independent reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.047 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.126 | w = 1/[σ2(Fo2) + (0.0458P)2 + 2.9944P] where P = (Fo2 + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max = 0.021 |
2463 reflections | Δρmax = 0.33 e Å−3 |
161 parameters | Δρmin = −0.43 e Å−3 |
5 restraints | Absolute structure: Flack (1983), 970 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.06 (13) |
[Na(C10H9.5N2O2S2)2(H2O)] | V = 1184.99 (17) Å3 |
Mr = 548.68 | Z = 2 |
Monoclinic, C2 | Mo Kα radiation |
a = 16.6960 (16) Å | µ = 0.46 mm−1 |
b = 5.9330 (3) Å | T = 298 K |
c = 13.5240 (12) Å | 0.14 × 0.10 × 0.08 mm |
β = 117.804 (3)° |
Nonius KappaCCD diffractometer | 2083 reflections with I > 2σ(I) |
3660 measured reflections | Rint = 0.050 |
2463 independent reflections |
R[F2 > 2σ(F2)] = 0.047 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.126 | Δρmax = 0.33 e Å−3 |
S = 1.00 | Δρmin = −0.43 e Å−3 |
2463 reflections | Absolute structure: Flack (1983), 970 Friedel pairs |
161 parameters | Absolute structure parameter: −0.06 (13) |
5 restraints |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > 2sigma(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
S1 | 0.34168 (7) | 0.79324 (19) | 0.76027 (8) | 0.0330 (3) | |
S2 | 0.33261 (8) | 1.0904 (2) | 0.57897 (10) | 0.0388 (4) | |
Na1 | 0.50000 | 0.7068 (4) | 0.50000 | 0.0324 (8) | |
O1 | 0.5618 (2) | 0.4475 (5) | 0.6448 (2) | 0.0318 (9) | |
O2 | 0.5000 (2) | 0.3636 (5) | 0.9088 (2) | 0.0348 (10) | |
O3 | 0.50000 | 1.0799 (9) | 0.50000 | 0.057 (2) | |
N1 | 0.4834 (2) | 0.5736 (6) | 0.7318 (2) | 0.0245 (10) | |
N2 | 0.4434 (2) | 0.7412 (6) | 0.6540 (3) | 0.0261 (10) | |
C1 | 0.5421 (3) | 0.4301 (7) | 0.7235 (3) | 0.0261 (12) | |
C2 | 0.5809 (3) | 0.2538 (7) | 0.8092 (3) | 0.0249 (11) | |
C3 | 0.5575 (3) | 0.2237 (7) | 0.8968 (3) | 0.0282 (11) | |
C4 | 0.5962 (3) | 0.0414 (8) | 0.9695 (4) | 0.0393 (16) | |
C5 | 0.6562 (3) | −0.1025 (9) | 0.9594 (4) | 0.0400 (16) | |
C6 | 0.6809 (3) | −0.0701 (8) | 0.8755 (4) | 0.0373 (14) | |
C7 | 0.6425 (3) | 0.1041 (8) | 0.8012 (3) | 0.0325 (12) | |
C8 | 0.3821 (3) | 0.8554 (7) | 0.6639 (3) | 0.0262 (11) | |
C9 | 0.2806 (3) | 1.0562 (9) | 0.7390 (4) | 0.0400 (16) | |
C10 | 0.2425 (3) | 1.1176 (9) | 0.6176 (4) | 0.0453 (16) | |
H1 | 0.47040 | 0.56020 | 0.78750 | 0.0290* | |
H2 | 0.512 (8) | 0.379 (19) | 0.980 (3) | 0.0680* | 0.500 |
H3 | 0.470 (4) | 1.171 (8) | 0.435 (3) | 0.0680* | |
H4 | 0.58030 | 0.01670 | 1.02760 | 0.0470* | |
H5 | 0.68110 | −0.22480 | 1.01000 | 0.0480* | |
H6 | 0.72380 | −0.16700 | 0.86960 | 0.0450* | |
H7 | 0.65820 | 0.12360 | 0.74260 | 0.0390* | |
H9A | 0.23110 | 1.03850 | 0.75920 | 0.0480* | |
H9B | 0.32190 | 1.17610 | 0.78640 | 0.0480* | |
H10A | 0.21950 | 1.27430 | 0.60530 | 0.0540* | |
H10B | 0.19180 | 1.01580 | 0.57130 | 0.0540* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0373 (6) | 0.0381 (6) | 0.0316 (5) | 0.0081 (5) | 0.0228 (5) | 0.0031 (5) |
S2 | 0.0465 (7) | 0.0349 (6) | 0.0353 (6) | 0.0119 (5) | 0.0194 (5) | 0.0097 (5) |
Na1 | 0.0457 (14) | 0.0278 (13) | 0.0329 (12) | 0.0000 | 0.0260 (11) | 0.0000 |
O1 | 0.0435 (17) | 0.0330 (17) | 0.0300 (15) | 0.0067 (13) | 0.0265 (14) | 0.0027 (12) |
O2 | 0.0449 (18) | 0.0407 (19) | 0.0274 (15) | 0.0150 (15) | 0.0240 (15) | 0.0072 (13) |
O3 | 0.113 (5) | 0.029 (3) | 0.040 (3) | 0.0000 | 0.044 (3) | 0.0000 |
N1 | 0.0286 (17) | 0.0287 (18) | 0.0195 (15) | 0.0012 (15) | 0.0139 (13) | 0.0016 (14) |
N2 | 0.0321 (18) | 0.0259 (19) | 0.0225 (16) | 0.0035 (15) | 0.0145 (14) | 0.0029 (12) |
C1 | 0.030 (2) | 0.028 (2) | 0.025 (2) | −0.0002 (17) | 0.0167 (17) | −0.0024 (16) |
C2 | 0.0249 (18) | 0.027 (2) | 0.0217 (17) | −0.0008 (16) | 0.0100 (14) | −0.0048 (15) |
C3 | 0.030 (2) | 0.033 (2) | 0.0213 (18) | 0.0045 (17) | 0.0116 (16) | 0.0001 (16) |
C4 | 0.046 (3) | 0.041 (3) | 0.029 (2) | 0.008 (2) | 0.016 (2) | 0.0058 (18) |
C5 | 0.045 (3) | 0.036 (3) | 0.029 (2) | 0.012 (2) | 0.009 (2) | 0.0066 (19) |
C6 | 0.036 (2) | 0.033 (3) | 0.037 (2) | 0.011 (2) | 0.012 (2) | −0.002 (2) |
C7 | 0.033 (2) | 0.036 (2) | 0.033 (2) | −0.001 (2) | 0.0193 (18) | −0.005 (2) |
C8 | 0.029 (2) | 0.030 (2) | 0.0190 (18) | −0.0005 (16) | 0.0108 (16) | 0.0010 (15) |
C9 | 0.038 (2) | 0.044 (3) | 0.043 (3) | 0.009 (2) | 0.023 (2) | −0.003 (2) |
C10 | 0.040 (2) | 0.045 (3) | 0.045 (3) | 0.022 (2) | 0.015 (2) | 0.003 (2) |
S1—C8 | 1.764 (5) | N1—H1 | 0.8800 |
S1—C9 | 1.812 (6) | C1—C2 | 1.469 (6) |
S2—C8 | 1.750 (4) | C2—C3 | 1.421 (6) |
S2—C10 | 1.815 (6) | C2—C7 | 1.401 (7) |
Na1—O1 | 2.320 (3) | C3—C4 | 1.401 (6) |
Na1—O3 | 2.214 (6) | C4—C5 | 1.371 (8) |
Na1—N2 | 2.666 (4) | C5—C6 | 1.390 (7) |
Na1—O1i | 2.320 (3) | C6—C7 | 1.374 (6) |
Na1—N2i | 2.666 (4) | C9—C10 | 1.503 (7) |
O1—C1 | 1.256 (5) | C4—H4 | 0.9500 |
O2—C3 | 1.335 (6) | C5—H5 | 0.9500 |
O2—H2 | 0.89 (5) | C6—H6 | 0.9500 |
O3—H3i | 0.95 (4) | C7—H7 | 0.9500 |
O3—H3 | 0.95 (4) | C9—H9A | 0.9900 |
N1—N2 | 1.373 (5) | C9—H9B | 0.9900 |
N1—C1 | 1.342 (6) | C10—H10A | 0.9900 |
N2—C8 | 1.285 (6) | C10—H10B | 0.9900 |
S1···N1 | 2.880 (4) | C3···H1 | 2.5100 |
S1···C4ii | 3.614 (5) | C3···H2ix | 2.60 (11) |
S2···C10iii | 3.660 (5) | C4···H9Bxii | 3.0300 |
S2···O3 | 3.4263 (15) | C4···H2ix | 2.98 (12) |
S1···H1 | 2.4300 | C4···H4ix | 2.9700 |
S1···H7iv | 3.1300 | C6···H5xiii | 2.9300 |
S1···H4ii | 2.8600 | C7···H5xiii | 3.0300 |
S2···H10Aiii | 2.9100 | C7···H3viii | 2.88 (4) |
S2···H10Bv | 3.1500 | C9···H6xiv | 2.8800 |
Na1···C10vi | 3.633 (6) | C9···H4ii | 2.9300 |
Na1···C10iii | 3.633 (6) | H1···S1 | 2.4300 |
Na1···H10Bvi | 3.1000 | H1···O2 | 1.8800 |
Na1···H10Biii | 3.1000 | H1···C3 | 2.5100 |
O1···O3vii | 2.788 (5) | H1···H2 | 2.5900 |
O1···N2 | 2.681 (5) | H2···H1 | 2.5900 |
O1···C9vi | 3.323 (7) | H2···H4 | 2.3800 |
O1···O3viii | 2.788 (5) | H2···O2ix | 1.61 (9) |
O1···C10vi | 3.360 (7) | H2···C3ix | 2.60 (11) |
O2···C4ix | 3.378 (6) | H2···C4ix | 2.98 (12) |
O2···N1 | 2.596 (4) | H3···O1xi | 1.90 (4) |
O2···C3ix | 3.298 (5) | H3···C1xi | 2.57 (4) |
O2···O2ix | 2.467 (4) | H3···C2xi | 3.04 (4) |
O3···O1x | 2.788 (5) | H3···C7xi | 2.88 (4) |
O3···S2i | 3.4263 (15) | H3···H7xi | 2.3700 |
O3···O1xi | 2.788 (5) | H4···H2 | 2.3800 |
O3···S2 | 3.4263 (15) | H4···S1xii | 2.8600 |
O1···H7 | 2.4600 | H4···O2ix | 2.8000 |
O1···H10Bvi | 2.8100 | H4···C4ix | 2.9700 |
O1···H3viii | 1.90 (4) | H4···C9xii | 2.9300 |
O1···H9Avi | 2.5700 | H4···H4ix | 2.4200 |
O2···H2ix | 1.61 (8) | H4···H9Bxii | 2.4600 |
O2···H9Bvii | 2.8700 | H5···C6xv | 2.9300 |
O2···H4ix | 2.8000 | H5···C7xv | 3.0300 |
O2···H1 | 1.8800 | H6···C9xvi | 2.8800 |
N1···S1 | 2.880 (4) | H6···H9Axvi | 2.3400 |
N1···O1 | 2.257 (5) | H6···H9Bxvi | 2.5600 |
N1···O2 | 2.596 (4) | H7···O1 | 2.4600 |
N2···O1 | 2.681 (5) | H7···H3viii | 2.3700 |
C3···O2ix | 3.298 (5) | H7···S1vi | 3.1300 |
C4···O2ix | 3.378 (6) | H9A···O1iv | 2.5700 |
C4···S1xii | 3.614 (5) | H9A···C1iv | 3.0300 |
C4···C9xii | 3.495 (7) | H9A···H6xiv | 2.3400 |
C9···O1iv | 3.323 (7) | H9B···O2x | 2.8700 |
C9···C4ii | 3.495 (7) | H9B···C4ii | 3.0300 |
C10···O1iv | 3.360 (7) | H9B···H4ii | 2.4600 |
C10···Na1iv | 3.633 (6) | H9B···H6xiv | 2.5600 |
C10···Na1v | 3.633 (6) | H10A···S2v | 2.9100 |
C10···S2v | 3.660 (5) | H10B···Na1iv | 3.1000 |
C1···H9Avi | 3.0300 | H10B···O1iv | 2.8100 |
C1···H3viii | 2.57 (4) | H10B···S2iii | 3.1500 |
C2···H3viii | 3.04 (4) | H10B···Na1v | 3.1000 |
C8—S1—C9 | 94.8 (2) | O2—C3—C2 | 121.1 (4) |
C8—S2—C10 | 94.8 (2) | O2—C3—C4 | 121.2 (4) |
O1—Na1—O3 | 131.54 (8) | C3—C4—C5 | 122.0 (5) |
O1—Na1—N2 | 64.63 (11) | C4—C5—C6 | 120.3 (5) |
O1—Na1—O1i | 96.91 (13) | C5—C6—C7 | 119.1 (5) |
O1—Na1—N2i | 122.01 (13) | C2—C7—C6 | 122.0 (4) |
O3—Na1—N2 | 85.61 (9) | S1—C8—S2 | 115.2 (3) |
O1i—Na1—O3 | 131.54 (8) | S1—C8—N2 | 124.4 (3) |
O3—Na1—N2i | 85.61 (9) | S2—C8—N2 | 120.5 (3) |
O1i—Na1—N2 | 122.01 (13) | S1—C9—C10 | 107.6 (4) |
N2—Na1—N2i | 171.22 (15) | S2—C10—C9 | 107.9 (4) |
O1i—Na1—N2i | 64.63 (11) | C3—C4—H4 | 119.00 |
Na1—O1—C1 | 125.5 (3) | C5—C4—H4 | 119.00 |
C3—O2—H2 | 113 (8) | C4—C5—H5 | 120.00 |
Na1—O3—H3 | 125 (3) | C6—C5—H5 | 120.00 |
Na1—O3—H3i | 125 (3) | C5—C6—H6 | 120.00 |
H3—O3—H3i | 111 (4) | C7—C6—H6 | 120.00 |
N2—N1—C1 | 120.6 (3) | C2—C7—H7 | 119.00 |
Na1—N2—N1 | 108.7 (2) | C6—C7—H7 | 119.00 |
Na1—N2—C8 | 135.3 (3) | S1—C9—H9A | 110.00 |
N1—N2—C8 | 115.4 (4) | S1—C9—H9B | 110.00 |
C1—N1—H1 | 120.00 | C10—C9—H9A | 110.00 |
N2—N1—H1 | 120.00 | C10—C9—H9B | 110.00 |
N1—C1—C2 | 117.2 (4) | H9A—C9—H9B | 108.00 |
O1—C1—N1 | 120.6 (4) | S2—C10—H10A | 110.00 |
O1—C1—C2 | 122.3 (4) | S2—C10—H10B | 110.00 |
C1—C2—C7 | 117.4 (4) | C9—C10—H10A | 110.00 |
C3—C2—C7 | 118.8 (4) | C9—C10—H10B | 110.00 |
C1—C2—C3 | 123.8 (4) | H10A—C10—H10B | 108.00 |
C2—C3—C4 | 117.8 (4) | ||
C9—S1—C8—S2 | −11.2 (3) | N2—N1—C1—C2 | −179.2 (4) |
C9—S1—C8—N2 | 168.7 (4) | Na1—N2—C8—S1 | 163.7 (2) |
C8—S1—C9—C10 | 35.8 (4) | Na1—N2—C8—S2 | −16.4 (6) |
C10—S2—C8—S1 | −11.6 (3) | N1—N2—C8—S1 | −5.8 (5) |
C10—S2—C8—N2 | 168.5 (4) | N1—N2—C8—S2 | 174.1 (3) |
C8—S2—C10—C9 | 36.2 (4) | O1—C1—C2—C3 | −177.5 (4) |
O3—Na1—O1—C1 | 60.2 (4) | O1—C1—C2—C7 | 0.7 (6) |
N2—Na1—O1—C1 | 2.4 (3) | N1—C1—C2—C3 | 2.1 (6) |
O1i—Na1—O1—C1 | −119.8 (3) | N1—C1—C2—C7 | −179.8 (4) |
N2i—Na1—O1—C1 | 175.9 (3) | C1—C2—C3—O2 | −2.7 (7) |
O1—Na1—N2—N1 | −1.8 (2) | C1—C2—C3—C4 | 176.8 (4) |
O1—Na1—N2—C8 | −171.8 (5) | C7—C2—C3—O2 | 179.1 (4) |
O3—Na1—N2—N1 | −142.4 (2) | C7—C2—C3—C4 | −1.4 (6) |
O3—Na1—N2—C8 | 47.6 (4) | C1—C2—C7—C6 | −178.4 (4) |
O1i—Na1—N2—N1 | 80.2 (3) | C3—C2—C7—C6 | −0.1 (7) |
O1i—Na1—N2—C8 | −89.8 (4) | O2—C3—C4—C5 | −179.2 (4) |
Na1—O1—C1—N1 | −2.7 (6) | C2—C3—C4—C5 | 1.3 (7) |
Na1—O1—C1—C2 | 176.9 (3) | C3—C4—C5—C6 | 0.3 (8) |
C1—N1—N2—Na1 | 1.5 (4) | C4—C5—C6—C7 | −1.8 (8) |
C1—N1—N2—C8 | 173.7 (4) | C5—C6—C7—C2 | 1.7 (7) |
N2—N1—C1—O1 | 0.4 (6) | S1—C9—C10—S2 | −48.2 (4) |
Symmetry codes: (i) −x+1, y, −z+1; (ii) −x+1, y+1, −z+2; (iii) −x+1/2, y−1/2, −z+1; (iv) x−1/2, y+1/2, z; (v) −x+1/2, y+1/2, −z+1; (vi) x+1/2, y−1/2, z; (vii) x, y−1, z; (viii) −x+1, y−1, −z+1; (ix) −x+1, y, −z+2; (x) x, y+1, z; (xi) −x+1, y+1, −z+1; (xii) −x+1, y−1, −z+2; (xiii) −x+3/2, y+1/2, −z+2; (xiv) x−1/2, y+3/2, z; (xv) −x+3/2, y−1/2, −z+2; (xvi) x+1/2, y−3/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···S1 | 0.8800 | 2.4300 | 2.880 (4) | 112.00 |
N1—H1···O2 | 0.8800 | 1.8800 | 2.596 (4) | 137.00 |
O2—H2···O2ix | 0.89 (5) | 1.61 (9) | 2.467 (4) | 160 (14) |
O3—H3···O1xi | 0.95 (4) | 1.90 (4) | 2.788 (5) | 155 (4) |
C4—H4···S1xii | 0.95 | 2.86 | 3.614 (5) | 137 |
C7—H7···O1 | 0.95 | 2.46 | 2.790 (5) | 100 |
C9—H9A···O1iv | 0.99 | 2.57 | 3.323 (7) | 133 |
Symmetry codes: (iv) x−1/2, y+1/2, z; (ix) −x+1, y, −z+2; (xi) −x+1, y+1, −z+1; (xii) −x+1, y−1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | [Na(C10H9.5N2O2S2)2(H2O)] |
Mr | 548.68 |
Crystal system, space group | Monoclinic, C2 |
Temperature (K) | 298 |
a, b, c (Å) | 16.6960 (16), 5.9330 (3), 13.5240 (12) |
β (°) | 117.804 (3) |
V (Å3) | 1184.99 (17) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.46 |
Crystal size (mm) | 0.14 × 0.10 × 0.08 |
Data collection | |
Diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3660, 2463, 2083 |
Rint | 0.050 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.126, 1.00 |
No. of reflections | 2463 |
No. of parameters | 161 |
No. of restraints | 5 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.33, −0.43 |
Absolute structure | Flack (1983), 970 Friedel pairs |
Absolute structure parameter | −0.06 (13) |
Computer programs: COLLECT (Nonius, 1998), SCALEPACK (Otwinowski & Minor, 1997), DENZO (Otwinowski & Minor, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2 | 0.8800 | 1.8800 | 2.596 (4) | 137.00 |
O2—H2···O2i | 0.89 (5) | 1.61 (9) | 2.467 (4) | 160 (14) |
O3—H3···O1ii | 0.95 (4) | 1.90 (4) | 2.788 (5) | 155 (4) |
Symmetry codes: (i) −x+1, y, −z+2; (ii) −x+1, y+1, −z+1. |
Acknowledgements
The authors thank the MESRS (Algeria) for financial support (PNR project).
References
Beghidja, C., Rogez, G., Kortus, J., Wesolek, M. & Welter, R. (2006). J. Am. Chem. Soc. 128, 3140–3141. Web of Science CSD CrossRef PubMed CAS Google Scholar
Beghidja, C., Wesolek, M. & Welter, R. (2005). Inorg. Chim. Acta, 358, 3881–3888. Web of Science CSD CrossRef CAS Google Scholar
Bouchameni, C., Beghidja, C., Beghidja, A., Rabu, P. & Welter, R. (2011). Polyhedron, 30, 1774–1778. Web of Science CSD CrossRef CAS Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Nonius (1998). COLLECT. Nonius BV, Delft, The Netherlands. Google Scholar
Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307–326. New York: Academic Press. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Tarafder, M. T. H., Ali, M. A., Saravanan, N., Weng, W. Y., Kumar, S., Umar-Tsafe, N. & Crouse, K. A. (2000). Transition Met. Chem. 25, 295–298. Web of Science CrossRef CAS Google Scholar
Tarafder, M. T. H., Kasbollah, A., Crouse, K. A., Ali, A. M., Yamin, B. M. & Fun, H. K. (2001). Polyhedron, 20, 2363–2370. Web of Science CSD CrossRef CAS Google Scholar
Wang, X., Deng, Z., Jin, B., Tian, Y. & Lin, X. (2002). Bull. Chem. Soc. Jpn, 75, 1269–1273. Web of Science CrossRef CAS Google Scholar
Zhou, H. D., Wang, P., Cheng, L., Gao, Y., Zhu, Y., Wu, J., Tian, Y., Tao, Z., Jiang, M. & Fun, H. K. (2007). J. Mol. Struct. 826, 205–210. Web of Science CSD CrossRef CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Dithiocarbazate R—NH2NHCS2 (DTC) and its substituted compounds remain of interest to researchers because of their wide variation in structure and properties (Zhou et al., 2007; Wang et al., 2002). Some of these compounds have been widely studies for their antibacterial and antifungal activities (Tarafder et al., 2000; Tarafder et al., 2001). The ligand H2L was synthesized as previously described (Beghidja et al., 2005). The molecular structure of the title compound is illustrated in Fig. 1. The sodium cation is chelated by two H1.5L-1/2 bidentate anions coordinated by the hydrazide group via O1 and N2 atoms. Na1—O1 = 2.316 (3) Å, Na1—N2 = 2.664 (3) Å. The geometry around the metal is a distorted trigonal bipyramid with a water molecule lying in the axial position through O3. Na1—O3 = 2.213 (5) Å. The crystal structure can be described as a one-dimensional set of chains, interlinked by strong hydrogen-bonds type O—H···O, along the b axis, between O3—H3···O1. These chains are interconnected along the c axis via strong hydrogen-bonds type O—H···O between O2—H2···O2 (Fig 2).