organic compounds
(2R,3R)-3-O-Benzoyl-N-benzyltartramide†
aWarsaw University of Technology, Faculty of Chemistry, Noakowskiego 3, 00-664 Warszawa, Poland
*Correspondence e-mail: izabela@ch.pw.edu.pl
The title compound, C18H17NO6 [systematic name: (2R,3R)-4-benzylamino-2-benzoyloxy-3-hydroxy-4-oxobutanoic acid], is the first structurally characterized unsymmetrical monoamide–monoacyl tartaric acid derivative. The molecule shows a around the tartramide Csp3—Csp3 bond with trans-oriented carboxyl and amide groups. The molecular conformation is stabilized by an intramolecular N—H⋯O hydrogen bond. In the crystal, molecules are linked by O—H⋯O hydrogen bonds between the carboxyl and amide carbonyl groups, forming translational chains along [001]. Further O—H⋯O and N—H⋯O hydrogen bonds as well as weaker C—H⋯O and C—H⋯π intermolecular interactions extend the supramolecular assembly into a double-layer structure parallel to (100). There are no directional interactions between the double layers.
Related literature
For crystal structures of R,R-tartaric mono see: Rychlewska et al. (1999); Rychlewska & Warżajtis (2000, 2001). For examples of the crystal structures of monoacyl derivatives, see: Madura et al. (2010); Knyazev et al. (1988); Chekhlov et al. (1986); Ishihara et al. (1993). For the synthesis, see: Bell (1987); Bernaś et al. (2010).
Experimental
Crystal data
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Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009), PLATON (Spek, 2009) and publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536812022933/gk2491sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812022933/gk2491Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812022933/gk2491Isup3.mol
Supporting information file. DOI: 10.1107/S1600536812022933/gk2491Isup4.cml
A (1:2 mol/mol) mixture of O-benzoyl-L-tartaric anhydride (Bernaś et al., 2010) and benzylamine in acetonitrile was stirred at room temperature for 10 min. The mixture was then acidified with 10% HCl and filtered. The resulting white solid product was rinsed with water to give pure title compound with m.p. 465–467 K. Preparation and characterization of regioisomer of the title compound was described by Bell (1987), although its structure was defined incorrectly. [α]25D = +40.9°, (c 1, EtOH). IR (EtOH): ν = 693, 708 (C=C, Ph); 1112, 1263 (C—O); 1663 (C=O, CONH); 1710 (C=O, COOH); 1723 (C=O, COBz) cm-1. 1H NMR (400 MHz, DMSO-d6): δ = 4.43–4.15 (m, 2H), 4.62 (d, 1H), 5.53 (d, 1H), 6.42 (br), 6.81–6.91 (m, 5H), 7.42–7.99 (m, 5H), 8.69 (t, 1H) p.p.m.. 13C NMR (400 MHz, DMSO-d6): δ = 41.87 (CH2), 71.33 (CH), 74.04 (CH), 126.44, 127.88, 128.76, 128.76, 129.06, 129.52, 133.71, 139.25 (Ph), 165.01, 168.93, 170.28 (C=O) p.p.m.. Anal. Calcd. (%) for C18H17NO6: C 62.97; H 4.99; N 4.08. Found: C 62.92; H 4.99; N 4.11. Crystals suitable for single-crystal X-ray diffraction measurement were obtained from saturated ethyl acetate/methanol (3:1).
The position of the H atoms attached to O and N atoms were freely refined with Uiso(H) = 1.2×Ueq(N) and Uiso(H) =1.5×Ueq(O). Other H atoms were positioned geometrically and refined using a riding model with C—H = 0.95–0.99 Å and with Uiso(H) = 1.2× Ueq(C). The
was assigned on the basis of that confirmed the known of the reagent. The estimated number of measured Friedel pairs amounts to 1321 with the fraction of 0.813.Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell
CrysAlis PRO (Oxford Diffraction, 2009); data reduction: CrysAlis PRO (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009), PLATON (Spek, 2009) and publCIF (Westrip, 2010).Fig. 1. ORTEP plot of the molecular structure of the title compound, with displacement ellipsoids drawn at the 50% probability level. Hydrogen atoms are depicted as spheres with arbitrary radii. Dotted line indicates intramolecular hydrogen bond. | |
Fig. 2. (a) The staggered conformation (T) around C2—C3 bond; (b) Antiplanar (a) conformations around C1—C2 and C4—C3 bonds. | |
Fig. 3. View along the [010] direction showing double-layers of molecules formed by two types of O—H···O (dashed lines) and N—H···O (dotted lines) bonds. Symmetry codes: (i) x, y, z + 1; (ii) -x + 1/2, y + 1/2, -z + 2; (iii) x, y + 1, z. |
C18H17NO6 | Dx = 1.383 Mg m−3 |
Mr = 343.33 | Melting point: 193 K |
Monoclinic, C2 | Cu Kα radiation, λ = 1.5418 Å |
a = 35.7118 (6) Å | Cell parameters from 23556 reflections |
b = 6.17734 (11) Å | θ = 5.0–67.0° |
c = 7.48599 (15) Å | µ = 0.88 mm−1 |
β = 93.0377 (15)° | T = 100 K |
V = 1649.12 (5) Å3 | Prism, colourless |
Z = 4 | 0.54 × 0.22 × 0.18 mm |
F(000) = 720 |
Agilent Gemini A Ultra diffractometer | 2945 independent reflections |
Radiation source: Enhance Ultra (Cu) X-ray Source | 2928 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.038 |
Detector resolution: 10.3347 pixels mm-1 | θmax = 67.1°, θmin = 5.0° |
ω scans | h = −42→42 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | k = −7→7 |
Tmin = 0.724, Tmax = 1.000 | l = −8→8 |
29440 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.026 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.071 | w = 1/[σ2(Fo2) + (0.0442P)2 + 0.6346P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max = 0.001 |
2945 reflections | Δρmax = 0.19 e Å−3 |
235 parameters | Δρmin = −0.17 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 1321 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.01 (13) |
C18H17NO6 | V = 1649.12 (5) Å3 |
Mr = 343.33 | Z = 4 |
Monoclinic, C2 | Cu Kα radiation |
a = 35.7118 (6) Å | µ = 0.88 mm−1 |
b = 6.17734 (11) Å | T = 100 K |
c = 7.48599 (15) Å | 0.54 × 0.22 × 0.18 mm |
β = 93.0377 (15)° |
Agilent Gemini A Ultra diffractometer | 2945 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | 2928 reflections with I > 2σ(I) |
Tmin = 0.724, Tmax = 1.000 | Rint = 0.038 |
29440 measured reflections |
R[F2 > 2σ(F2)] = 0.026 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.071 | Δρmax = 0.19 e Å−3 |
S = 1.06 | Δρmin = −0.17 e Å−3 |
2945 reflections | Absolute structure: Flack (1983), 1321 Friedel pairs |
235 parameters | Absolute structure parameter: −0.01 (13) |
1 restraint |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.31056 (3) | 0.28482 (16) | 1.07911 (12) | 0.0222 (2) | |
H1 | 0.2993 (5) | 0.315 (4) | 1.194 (3) | 0.046* | |
O2 | 0.25203 (3) | 0.35877 (17) | 0.97437 (12) | 0.0229 (2) | |
O3 | 0.33951 (2) | 0.36177 (15) | 0.77766 (11) | 0.0195 (2) | |
O4 | 0.29381 (3) | 0.72671 (16) | 0.76263 (12) | 0.0213 (2) | |
H4 | 0.2772 (6) | 0.764 (4) | 0.825 (3) | 0.046* | |
O5 | 0.28714 (3) | 0.38296 (17) | 0.38200 (11) | 0.0254 (2) | |
O6 | 0.34669 (3) | 0.0721 (2) | 0.60328 (18) | 0.0446 (3) | |
N1 | 0.31211 (3) | 0.7200 (2) | 0.43257 (14) | 0.0196 (2) | |
H1A | 0.3160 (5) | 0.818 (3) | 0.517 (3) | 0.037* | |
C1 | 0.28496 (3) | 0.3271 (2) | 0.95296 (16) | 0.0185 (3) | |
C2 | 0.29952 (3) | 0.3381 (2) | 0.76528 (16) | 0.0175 (3) | |
H2 | 0.2924 | 0.2040 | 0.6969 | 0.021* | |
C3 | 0.28249 (3) | 0.5372 (2) | 0.67065 (16) | 0.0185 (3) | |
H3 | 0.2545 | 0.5262 | 0.6689 | 0.022* | |
C4 | 0.29469 (3) | 0.5431 (2) | 0.47812 (16) | 0.0176 (3) | |
C5 | 0.36003 (4) | 0.2140 (2) | 0.69603 (17) | 0.0217 (3) | |
C6 | 0.40098 (4) | 0.2478 (2) | 0.72820 (16) | 0.0220 (3) | |
C7 | 0.41579 (4) | 0.4261 (3) | 0.82131 (18) | 0.0256 (3) | |
H7 | 0.3996 | 0.5298 | 0.8704 | 0.031* | |
C8 | 0.45432 (4) | 0.4509 (3) | 0.8417 (2) | 0.0325 (4) | |
H8 | 0.4646 | 0.5732 | 0.9037 | 0.039* | |
C9 | 0.47800 (4) | 0.2982 (3) | 0.7721 (2) | 0.0341 (4) | |
H9 | 0.5044 | 0.3155 | 0.7874 | 0.041* | |
C10 | 0.46321 (4) | 0.1209 (3) | 0.6808 (2) | 0.0327 (3) | |
H10 | 0.4795 | 0.0163 | 0.6337 | 0.039* | |
C11 | 0.42477 (4) | 0.0950 (3) | 0.6574 (2) | 0.0275 (3) | |
H11 | 0.4147 | −0.0263 | 0.5935 | 0.033* | |
C12 | 0.32616 (4) | 0.7696 (2) | 0.25671 (16) | 0.0202 (3) | |
H12A | 0.3175 | 0.9160 | 0.2196 | 0.024* | |
H12B | 0.3154 | 0.6647 | 0.1680 | 0.024* | |
C13 | 0.36848 (4) | 0.7612 (2) | 0.25630 (16) | 0.0206 (3) | |
C14 | 0.38841 (4) | 0.5883 (2) | 0.33400 (19) | 0.0270 (3) | |
H14 | 0.3753 | 0.4735 | 0.3876 | 0.032* | |
C15 | 0.42720 (4) | 0.5825 (3) | 0.3336 (2) | 0.0310 (3) | |
H15 | 0.4406 | 0.4653 | 0.3885 | 0.037* | |
C16 | 0.44647 (4) | 0.7487 (3) | 0.25267 (19) | 0.0308 (3) | |
H16 | 0.4731 | 0.7458 | 0.2530 | 0.037* | |
C17 | 0.42679 (4) | 0.9175 (3) | 0.1720 (2) | 0.0317 (3) | |
H17 | 0.4399 | 1.0290 | 0.1141 | 0.038* | |
C18 | 0.38793 (4) | 0.9259 (2) | 0.17444 (19) | 0.0260 (3) | |
H18 | 0.3746 | 1.0441 | 0.1203 | 0.031* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0249 (4) | 0.0281 (5) | 0.0133 (4) | 0.0021 (4) | −0.0010 (3) | 0.0001 (4) |
O2 | 0.0203 (4) | 0.0337 (5) | 0.0152 (4) | 0.0001 (4) | 0.0047 (3) | 0.0039 (4) |
O3 | 0.0167 (4) | 0.0254 (5) | 0.0165 (4) | 0.0000 (4) | 0.0009 (3) | −0.0036 (4) |
O4 | 0.0232 (4) | 0.0257 (5) | 0.0157 (4) | −0.0002 (4) | 0.0062 (3) | −0.0049 (4) |
O5 | 0.0358 (5) | 0.0284 (5) | 0.0123 (4) | −0.0105 (4) | 0.0024 (4) | −0.0018 (4) |
O6 | 0.0270 (5) | 0.0438 (7) | 0.0643 (8) | −0.0105 (5) | 0.0154 (5) | −0.0338 (6) |
N1 | 0.0207 (5) | 0.0243 (6) | 0.0140 (5) | −0.0020 (5) | 0.0032 (4) | −0.0020 (5) |
C1 | 0.0228 (6) | 0.0175 (6) | 0.0152 (6) | −0.0023 (5) | 0.0011 (5) | −0.0002 (5) |
C2 | 0.0167 (6) | 0.0237 (6) | 0.0121 (6) | −0.0015 (5) | 0.0010 (4) | −0.0019 (5) |
C3 | 0.0175 (6) | 0.0257 (7) | 0.0125 (6) | −0.0014 (6) | 0.0020 (4) | −0.0010 (5) |
C4 | 0.0151 (5) | 0.0248 (6) | 0.0128 (6) | 0.0000 (5) | −0.0010 (4) | 0.0011 (5) |
C5 | 0.0229 (6) | 0.0235 (7) | 0.0192 (6) | −0.0012 (6) | 0.0065 (5) | −0.0028 (6) |
C6 | 0.0223 (6) | 0.0284 (8) | 0.0156 (6) | 0.0019 (6) | 0.0046 (5) | 0.0034 (5) |
C7 | 0.0234 (7) | 0.0343 (8) | 0.0192 (6) | 0.0007 (6) | 0.0030 (5) | −0.0037 (6) |
C8 | 0.0243 (7) | 0.0486 (10) | 0.0243 (7) | −0.0042 (7) | −0.0010 (6) | −0.0054 (7) |
C9 | 0.0181 (6) | 0.0575 (11) | 0.0266 (7) | 0.0026 (7) | 0.0009 (5) | 0.0055 (7) |
C10 | 0.0269 (8) | 0.0434 (9) | 0.0286 (8) | 0.0110 (7) | 0.0083 (6) | 0.0052 (7) |
C11 | 0.0269 (7) | 0.0314 (8) | 0.0250 (7) | 0.0035 (6) | 0.0073 (6) | 0.0009 (6) |
C12 | 0.0241 (6) | 0.0237 (7) | 0.0131 (6) | −0.0025 (5) | 0.0027 (5) | 0.0028 (5) |
C13 | 0.0241 (6) | 0.0255 (7) | 0.0124 (5) | −0.0019 (5) | 0.0029 (5) | −0.0020 (5) |
C14 | 0.0270 (7) | 0.0307 (8) | 0.0237 (7) | 0.0014 (6) | 0.0059 (5) | 0.0052 (6) |
C15 | 0.0272 (7) | 0.0399 (9) | 0.0261 (7) | 0.0062 (6) | 0.0029 (6) | 0.0027 (6) |
C16 | 0.0203 (6) | 0.0437 (9) | 0.0289 (7) | −0.0010 (6) | 0.0049 (5) | −0.0088 (7) |
C17 | 0.0289 (8) | 0.0345 (8) | 0.0329 (8) | −0.0083 (6) | 0.0111 (6) | −0.0021 (7) |
C18 | 0.0278 (7) | 0.0267 (7) | 0.0241 (7) | −0.0017 (6) | 0.0055 (6) | 0.0019 (6) |
O1—C1 | 1.3053 (15) | C8—H8 | 0.9500 |
O1—H1 | 0.99 (2) | C9—C8 | 1.387 (2) |
O2—C1 | 1.2111 (16) | C9—H9 | 0.9500 |
O3—C2 | 1.4336 (14) | C10—C9 | 1.381 (3) |
O3—C5 | 1.3384 (16) | C10—C11 | 1.384 (2) |
O4—C3 | 1.4067 (17) | C10—H10 | 0.9500 |
O4—H4 | 0.81 (2) | C11—H11 | 0.9500 |
O5—C4 | 1.2442 (17) | C12—H12A | 0.9900 |
O6—C5 | 1.2010 (18) | C12—H12B | 0.9900 |
N1—C4 | 1.3115 (18) | C13—C12 | 1.5126 (17) |
N1—C12 | 1.4659 (16) | C13—C18 | 1.3922 (19) |
N1—H1A | 0.88 (2) | C14—C13 | 1.393 (2) |
C2—C1 | 1.5253 (17) | C14—C15 | 1.386 (2) |
C2—C3 | 1.5293 (18) | C14—H14 | 0.9500 |
C2—H2 | 1.0000 | C15—C16 | 1.392 (2) |
C3—C4 | 1.5280 (16) | C15—H15 | 0.9500 |
C3—H3 | 1.0000 | C16—H16 | 0.9500 |
C6—C5 | 1.4841 (18) | C17—C16 | 1.379 (2) |
C6—C7 | 1.393 (2) | C17—H17 | 0.9500 |
C6—C11 | 1.393 (2) | C18—H18 | 0.9500 |
C7—C8 | 1.385 (2) | C18—C17 | 1.390 (2) |
C7—H7 | 0.9500 | ||
C1—O1—H1 | 106.9 (12) | C9—C8—H8 | 119.8 |
C5—O3—C2 | 117.93 (10) | C8—C9—C10 | 120.05 (13) |
C3—O4—H4 | 108.7 (16) | C8—C9—H9 | 120.0 |
C4—N1—C12 | 126.69 (12) | C10—C9—H9 | 120.0 |
C4—N1—H1A | 116.4 (13) | C9—C10—C11 | 120.34 (14) |
C12—N1—H1A | 116.9 (13) | C9—C10—H10 | 119.8 |
O1—C1—O2 | 125.75 (11) | C11—C10—H10 | 119.8 |
O1—C1—C2 | 114.55 (10) | C6—C11—C10 | 119.61 (15) |
O2—C1—C2 | 119.70 (11) | C6—C11—H11 | 120.2 |
O3—C2—C1 | 109.39 (9) | C10—C11—H11 | 120.2 |
O3—C2—C3 | 108.56 (10) | N1—C12—C13 | 112.59 (10) |
O3—C2—H2 | 110.1 | N1—C12—H12A | 109.1 |
C1—C2—C3 | 108.41 (10) | N1—C12—H12B | 109.1 |
C1—C2—H2 | 110.1 | C13—C12—H12A | 109.1 |
C3—C2—H2 | 110.1 | C13—C12—H12B | 109.1 |
O4—C3—C2 | 110.23 (9) | H12A—C12—H12B | 107.8 |
O4—C3—C4 | 110.67 (10) | C14—C13—C12 | 120.92 (12) |
O4—C3—H3 | 108.9 | C18—C13—C12 | 119.84 (12) |
C2—C3—H3 | 108.9 | C18—C13—C14 | 119.23 (12) |
C4—C3—C2 | 109.26 (10) | C13—C14—H14 | 119.8 |
C4—C3—H3 | 108.9 | C15—C14—C13 | 120.48 (13) |
O5—C4—N1 | 127.10 (11) | C15—C14—H14 | 119.8 |
O5—C4—C3 | 117.56 (11) | C14—C15—C16 | 119.95 (14) |
N1—C4—C3 | 115.34 (11) | C14—C15—H15 | 120.0 |
O3—C5—O6 | 123.49 (12) | C16—C15—H15 | 120.0 |
O3—C5—C6 | 112.86 (11) | C15—C16—H16 | 120.1 |
O6—C5—C6 | 123.63 (12) | C17—C16—C15 | 119.71 (13) |
C5—C6—C7 | 122.51 (12) | C17—C16—H16 | 120.1 |
C5—C6—C11 | 117.27 (13) | C18—C17—H17 | 119.7 |
C7—C6—C11 | 120.20 (13) | C16—C17—C18 | 120.58 (14) |
C6—C7—C8 | 119.44 (14) | C16—C17—H17 | 119.7 |
C6—C7—H7 | 120.3 | C13—C18—H18 | 120.0 |
C8—C7—H7 | 120.3 | C17—C18—C13 | 120.01 (13) |
C7—C8—C9 | 120.35 (15) | C17—C18—H18 | 120.0 |
C7—C8—H8 | 119.8 | ||
C5—O3—C2—C1 | 123.19 (12) | C11—C6—C5—O3 | 176.38 (12) |
C5—O3—C2—C3 | −118.68 (11) | C11—C6—C5—O6 | −5.2 (2) |
C2—O3—C5—O6 | 5.3 (2) | C11—C6—C7—C8 | 0.5 (2) |
C2—O3—C5—C6 | −176.29 (10) | C5—C6—C7—C8 | −178.03 (13) |
C12—N1—C4—C3 | −178.86 (11) | C5—C6—C11—C10 | 178.85 (13) |
C12—N1—C4—O5 | 0.9 (2) | C7—C6—C11—C10 | 0.2 (2) |
C4—N1—C12—C13 | −108.11 (14) | C6—C7—C8—C9 | −0.9 (2) |
O3—C2—C1—O1 | −16.83 (15) | C10—C9—C8—C7 | 0.5 (2) |
O3—C2—C1—O2 | 162.45 (12) | C11—C10—C9—C8 | 0.3 (2) |
C3—C2—C1—O1 | −135.05 (11) | C9—C10—C11—C6 | −0.6 (2) |
C3—C2—C1—O2 | 44.24 (16) | C14—C13—C12—N1 | 46.90 (17) |
O3—C2—C3—O4 | −56.88 (12) | C18—C13—C12—N1 | −134.32 (13) |
O3—C2—C3—C4 | 64.93 (12) | C12—C13—C18—C17 | −179.25 (12) |
C1—C2—C3—O4 | 61.86 (12) | C14—C13—C18—C17 | −0.4 (2) |
C1—C2—C3—C4 | −176.32 (10) | C15—C14—C13—C12 | −179.72 (13) |
O4—C3—C4—O5 | 178.58 (11) | C15—C14—C13—C18 | 1.5 (2) |
O4—C3—C4—N1 | −1.62 (15) | C13—C14—C15—C16 | −1.0 (2) |
C2—C3—C4—O5 | 57.03 (14) | C14—C15—C16—C17 | −0.5 (2) |
C2—C3—C4—N1 | −123.17 (12) | C18—C17—C16—C15 | 1.6 (2) |
C7—C6—C5—O3 | −5.05 (18) | C13—C18—C17—C16 | −1.1 (2) |
C7—C6—C5—O6 | 173.34 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O5i | 0.99 (2) | 1.55 (2) | 2.5317 (13) | 171.2 (17) |
O4—H4···O2ii | 0.81 (2) | 1.96 (2) | 2.7501 (14) | 165 (2) |
N1—H1A···O6iii | 0.88 (2) | 2.002 (19) | 2.7788 (17) | 146.4 (18) |
N1—H1A···O4 | 0.88 (2) | 2.12 (2) | 2.5894 (14) | 112.8 (15) |
C2—H2···O6 | 1.00 | 2.25 | 2.6879 (17) | 105 |
C12—H12A···O1iv | 0.99 | 2.52 | 3.4827 (16) | 165 |
C12—H12B···O1v | 0.99 | 2.44 | 3.3117 (16) | 146 |
Symmetry codes: (i) x, y, z+1; (ii) −x+1/2, y+1/2, −z+2; (iii) x, y+1, z; (iv) x, y+1, z−1; (v) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | C18H17NO6 |
Mr | 343.33 |
Crystal system, space group | Monoclinic, C2 |
Temperature (K) | 100 |
a, b, c (Å) | 35.7118 (6), 6.17734 (11), 7.48599 (15) |
β (°) | 93.0377 (15) |
V (Å3) | 1649.12 (5) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 0.88 |
Crystal size (mm) | 0.54 × 0.22 × 0.18 |
Data collection | |
Diffractometer | Agilent Gemini A Ultra diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) |
Tmin, Tmax | 0.724, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 29440, 2945, 2928 |
Rint | 0.038 |
(sin θ/λ)max (Å−1) | 0.597 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.026, 0.071, 1.06 |
No. of reflections | 2945 |
No. of parameters | 235 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.19, −0.17 |
Absolute structure | Flack (1983), 1321 Friedel pairs |
Absolute structure parameter | −0.01 (13) |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), OLEX2 (Dolomanov et al., 2009), PLATON (Spek, 2009) and publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O5i | 0.99 (2) | 1.55 (2) | 2.5317 (13) | 171.2 (17) |
O4—H4···O2ii | 0.81 (2) | 1.96 (2) | 2.7501 (14) | 165 (2) |
N1—H1A···O6iii | 0.88 (2) | 2.002 (19) | 2.7788 (17) | 146.4 (18) |
N1—H1A···O4 | 0.88 (2) | 2.12 (2) | 2.5894 (14) | 112.8 (15) |
C12—H12A···O1iv | 0.99 | 2.52 | 3.4827 (16) | 165 |
C12—H12B···O1v | 0.99 | 2.44 | 3.3117 (16) | 146 |
Symmetry codes: (i) x, y, z+1; (ii) −x+1/2, y+1/2, −z+2; (iii) x, y+1, z; (iv) x, y+1, z−1; (v) x, y, z−1. |
Footnotes
†Tartaric acid and its O-acyl derivatives. Part 13.
Acknowledgements
This work was supported financially by Warsaw University of Technology.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title molecule crystallizes in non-centrosymmetric C2 space group as R,R enantiomer. Molecular structure with the atom numbering scheme is presented in Fig. 1. Similarly to the previously characterized tartaric acid mono amides (Rychlewska et al., 1999; Rychlewska & Warżajtis, 2000, 2001), the title molecule adopts the staggered conformation around the C2–C3 bond (Fig. 2.). Thus, the carboxylic group is in trans (T) orientation with respect to the amide group, whereas the hydroxy and benzoyl substituents adopt the gauche counterclockwise orientation. The conformation on C–C* bond in amide fragment enables the formation of an intramolecular N–H···O hydrogen bond between N–H donor and the hydroxyl group. Hence the carbonyl group is on the opposite side of the proximal C*–O bond. Such orientation, called antiplanar (a) is also observed in the carboxylic fragment, and the overall conformation of molecules can be given as T(a,a). It is worth noting that in case of dibenzoyl tartaric mono amides (Rychlewska & Warżajtis, 2001) or those with unsubstituted OH groups (Rychlewska et al., 1999; Rychlewska & Warżajtis, 2000) the conformation of the acid fragment is such that the carbonyl group eclipses the nearest C–O bond (synplanar conformation, s), while the presence of at least one N–H bond forces the conformation of the amide fragment to be antiplanar with the intramolecular N–H···O bond.
The analysis of intermolecular interactions shows that the title molecules related by translation along [001] form infinite head-to-tail chains via hydrogen bonds between carboxylic OH donors and amide carbonyl groups. A topologically analogous chain motif was observed in the crystal structures of dibenzoyl mono amides by Rychlewska & Warżajtis (2001). Further, the O–H hydroxyl group acts as a donor to carboxyl C=O group joining the chains related by 21 screw axis into a double layer (Fig. 3). The layer is enhanced by N—H···Obenzoyl carbonyl as well as weaker C—H···O and C—H···π intermolecular interactions. The neighbouring layers are held together by weak van der Waals forces only.