metal-organic compounds
Bis[2-(2-aminoethyl)-1H-benzimidazole-κ2N2,N3](nitrato-κ2O,O′)cobalt(II) chloride trihydrate
aChangchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, People's Republic of China, bGraduate University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China, cThe Experimental and Practical Teaching Centre, Shijiazhuang University of Economics, Shijiazhuang 050031, People's Republic of China, and dInstrumental Analysis Center, Hebei Normal University, Shijiazhuang 050024, People's Republic of China
*Correspondence e-mail: zhuguoyi@ciac.jl.cn
In the title compound, [Co(NO3)(C9H11N3)2]Cl·3H2O, the CoII atom is coordinated by four N atoms from two chelating 2-(2-aminoethyl)-1H-benzimidazole ligands and two O atoms from one nitrate anion in a distorted octahedral coordination environment. In the crystal, N—H⋯Cl, N—H⋯O, O—H⋯Cl and O—H⋯O hydrogen bonds link the complex cations, chloride anions and solvent water molecules into a three-dimensional network. π–π interactions between the imidazole and benzene rings and between the benzene rings are observed [centroid–centroid distances = 3.903 (3), 3.720 (3), 3.774 (3) and 3.926 (3) Å].
Related literature
For background to the coordination chemistry of benzimidazole and 2-substituted benzimidazole derivatives towards transition metal ions, see: Téllez et al. (2008). For the structures and properties of transition metal complexes with 2-(2-aminoethyl)benzimidazole, see: Dash et al. (1995); Zhang et al. (2008). For the synthesis of the 2-(2-aminoethyl)benzimidazole ligand, see: Cescon & Day (1962).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812018612/hy2542sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812018612/hy2542Isup2.hkl
The title compound was prepared by adding a methanol solution (5 ml) of Co(NO3)2.6H2O (0.1 mmol) to a methanol solution (5 ml) of 2-(2-aminoethyl)benzimidazole dihydrochloride (0.2 mmol) neutralized by sodium hydroxide (Cescon & Day, 1962). The mixture was stirred at room temperature for 15 h and then filtered. Purple crystals suitable for X-ray diffraction were obtained by slow evaporation of the solvent after several days. Analysis, calculated for C18H28ClCoN7O6: C 40.57, H 5.30, N 18.40%; found: C 40.42, H 5.48, N 18.36%.
H atoms bonded to C and N atoms were positioned geometrically and refined as riding atoms, with C—H = 0.93 (aromatic), 0.97 (CH2) and N—H = 0.86 (NH), 0.90 (NH2) Å and with Uiso(H) = 1.2Ueq(C,N). H atorms of water molecules were found from a difference Fourier map and refined as riding atoms, with O—H = 0.85 Å and with Uiso(H) = 1.2Ueq(O).
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Molecular structure of the title complex, with displacement ellipsoids drawn at the 30% probability level. | |
Fig. 2. The packing diagram viewed along the a axis. Dashed lines denote hydrogen bonds. |
[Co(NO3)(C9H11N3)2]Cl·3H2O | Z = 2 |
Mr = 532.85 | F(000) = 554 |
Triclinic, P1 | Dx = 1.572 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.408 (2) Å | Cell parameters from 1285 reflections |
b = 9.808 (3) Å | θ = 2.9–23.7° |
c = 17.280 (6) Å | µ = 0.93 mm−1 |
α = 76.238 (7)° | T = 296 K |
β = 89.203 (7)° | Cube, purple |
γ = 67.867 (5)° | 0.28 × 0.27 × 0.26 mm |
V = 1125.6 (6) Å3 |
Bruker APEXII CCD diffractometer | 3936 independent reflections |
Radiation source: fine-focus sealed tube | 2895 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
ϕ and ω scans | θmax = 25.0°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −8→8 |
Tmin = 0.780, Tmax = 0.794 | k = −9→11 |
5677 measured reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.131 | H-atom parameters constrained |
S = 0.99 | w = 1/[σ2(Fo2) + (0.0713P)2] where P = (Fo2 + 2Fc2)/3 |
3936 reflections | (Δ/σ)max = 0.001 |
298 parameters | Δρmax = 0.35 e Å−3 |
3 restraints | Δρmin = −0.86 e Å−3 |
[Co(NO3)(C9H11N3)2]Cl·3H2O | γ = 67.867 (5)° |
Mr = 532.85 | V = 1125.6 (6) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.408 (2) Å | Mo Kα radiation |
b = 9.808 (3) Å | µ = 0.93 mm−1 |
c = 17.280 (6) Å | T = 296 K |
α = 76.238 (7)° | 0.28 × 0.27 × 0.26 mm |
β = 89.203 (7)° |
Bruker APEXII CCD diffractometer | 3936 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2895 reflections with I > 2σ(I) |
Tmin = 0.780, Tmax = 0.794 | Rint = 0.029 |
5677 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 3 restraints |
wR(F2) = 0.131 | H-atom parameters constrained |
S = 0.99 | Δρmax = 0.35 e Å−3 |
3936 reflections | Δρmin = −0.86 e Å−3 |
298 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Co1 | 0.76176 (7) | 0.51980 (6) | 0.74870 (3) | 0.01888 (18) | |
Cl1 | 1.08278 (18) | 0.11248 (13) | 0.14279 (7) | 0.0416 (3) | |
C1 | 0.7611 (6) | 0.4443 (5) | 0.5882 (2) | 0.0240 (9) | |
C2 | 0.7801 (6) | 0.2936 (5) | 0.6108 (3) | 0.0324 (10) | |
H2A | 0.7928 | 0.2425 | 0.6644 | 0.039* | |
C3 | 0.7796 (7) | 0.2221 (6) | 0.5509 (3) | 0.0413 (12) | |
H3 | 0.7923 | 0.1211 | 0.5646 | 0.050* | |
C4 | 0.7604 (7) | 0.2986 (6) | 0.4698 (3) | 0.0430 (12) | |
H4 | 0.7585 | 0.2476 | 0.4310 | 0.052* | |
C5 | 0.7445 (6) | 0.4455 (6) | 0.4467 (3) | 0.0371 (11) | |
H5A | 0.7321 | 0.4959 | 0.3929 | 0.045* | |
C6 | 0.7475 (6) | 0.5175 (5) | 0.5072 (2) | 0.0291 (10) | |
C7 | 0.7441 (6) | 0.6755 (5) | 0.5797 (2) | 0.0248 (9) | |
C8 | 0.7469 (7) | 0.8163 (5) | 0.5963 (3) | 0.0361 (11) | |
H8A | 0.6403 | 0.9022 | 0.5633 | 0.043* | |
H8B | 0.8678 | 0.8260 | 0.5794 | 0.043* | |
C9 | 0.7298 (6) | 0.8281 (5) | 0.6815 (2) | 0.0285 (10) | |
H9A | 0.7666 | 0.9102 | 0.6877 | 0.034* | |
H9B | 0.5949 | 0.8524 | 0.6939 | 0.034* | |
C10 | 0.6666 (6) | 0.5948 (5) | 0.9090 (2) | 0.0239 (9) | |
C11 | 0.5304 (6) | 0.7426 (5) | 0.8863 (2) | 0.0317 (10) | |
H11 | 0.4912 | 0.7924 | 0.8328 | 0.038* | |
C12 | 0.4541 (7) | 0.8140 (6) | 0.9470 (3) | 0.0439 (13) | |
H12 | 0.3620 | 0.9134 | 0.9332 | 0.053* | |
C13 | 0.5108 (7) | 0.7422 (6) | 1.0267 (3) | 0.0447 (13) | |
H13 | 0.4561 | 0.7941 | 1.0652 | 0.054* | |
C14 | 0.6464 (7) | 0.5955 (6) | 1.0504 (3) | 0.0399 (12) | |
H14 | 0.6846 | 0.5462 | 1.1040 | 0.048* | |
C15 | 0.7235 (6) | 0.5244 (5) | 0.9898 (2) | 0.0294 (10) | |
C16 | 0.8857 (6) | 0.3640 (5) | 0.9178 (2) | 0.0265 (9) | |
C17 | 1.0300 (7) | 0.2219 (5) | 0.9025 (3) | 0.0362 (11) | |
H17A | 1.0044 | 0.1368 | 0.9349 | 0.043* | |
H17B | 1.1595 | 0.2109 | 0.9203 | 0.043* | |
C18 | 1.0314 (7) | 0.2116 (5) | 0.8160 (3) | 0.0336 (10) | |
H18A | 1.1505 | 0.1298 | 0.8095 | 0.040* | |
H18B | 0.9214 | 0.1882 | 0.8028 | 0.040* | |
N1 | 0.7582 (5) | 0.5483 (4) | 0.63286 (18) | 0.0229 (7) | |
N2 | 0.7352 (5) | 0.6619 (4) | 0.50395 (19) | 0.0317 (8) | |
H2 | 0.7239 | 0.7317 | 0.4612 | 0.038* | |
N3 | 0.8577 (5) | 0.6833 (4) | 0.73877 (18) | 0.0249 (8) | |
H3B | 0.8654 | 0.7008 | 0.7872 | 0.030* | |
H3C | 0.9790 | 0.6530 | 0.7222 | 0.030* | |
N4 | 0.7730 (5) | 0.4905 (4) | 0.86430 (18) | 0.0233 (8) | |
N5 | 0.8614 (5) | 0.3800 (4) | 0.9931 (2) | 0.0346 (9) | |
H5 | 0.9212 | 0.3121 | 1.0359 | 0.042* | |
N6 | 1.0196 (4) | 0.3571 (4) | 0.76028 (19) | 0.0247 (8) | |
H6A | 1.0511 | 0.3406 | 0.7119 | 0.030* | |
H6B | 1.1082 | 0.3872 | 0.7783 | 0.030* | |
N7 | 0.4435 (5) | 0.5208 (4) | 0.7462 (2) | 0.0332 (8) | |
O1 | 0.6072 (4) | 0.3975 (3) | 0.75714 (15) | 0.0238 (6) | |
O2 | 0.4853 (4) | 0.6428 (3) | 0.73689 (15) | 0.0248 (6) | |
O3 | 0.2770 (4) | 0.5211 (3) | 0.74554 (16) | 0.0325 (7) | |
O4 | 0.7163 (5) | 0.8522 (4) | 0.35574 (18) | 0.0491 (9) | |
H1O4 | 0.6480 | 0.8549 | 0.3158 | 0.059* | |
H2O4 | 0.7584 | 0.9225 | 0.3391 | 0.059* | |
O5 | 0.4947 (5) | 0.8627 (4) | 0.2253 (2) | 0.0512 (9) | |
H1O5 | 0.4095 | 0.9325 | 0.1902 | 0.061* | |
H2O5 | 0.4738 | 0.7817 | 0.2302 | 0.061* | |
O6 | 0.1492 (5) | 0.9162 (4) | 0.7010 (2) | 0.0515 (9) | |
H1O6 | 0.2360 | 0.8278 | 0.7051 | 0.062* | |
H2O6 | 0.0865 | 0.9132 | 0.7425 | 0.062* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.0188 (3) | 0.0192 (3) | 0.0200 (3) | −0.0091 (2) | 0.0009 (2) | −0.0046 (2) |
Cl1 | 0.0477 (7) | 0.0351 (7) | 0.0390 (7) | −0.0174 (6) | −0.0086 (5) | −0.0009 (5) |
C1 | 0.022 (2) | 0.030 (2) | 0.022 (2) | −0.0093 (19) | 0.0009 (17) | −0.0119 (18) |
C2 | 0.039 (3) | 0.032 (2) | 0.031 (2) | −0.017 (2) | 0.005 (2) | −0.011 (2) |
C3 | 0.050 (3) | 0.036 (3) | 0.048 (3) | −0.020 (2) | 0.004 (2) | −0.022 (2) |
C4 | 0.049 (3) | 0.054 (3) | 0.040 (3) | −0.027 (3) | 0.005 (2) | −0.028 (3) |
C5 | 0.037 (3) | 0.059 (3) | 0.023 (2) | −0.022 (2) | 0.0043 (19) | −0.017 (2) |
C6 | 0.021 (2) | 0.037 (3) | 0.027 (2) | −0.010 (2) | 0.0001 (18) | −0.007 (2) |
C7 | 0.028 (2) | 0.028 (2) | 0.020 (2) | −0.0139 (19) | 0.0017 (17) | −0.0045 (18) |
C8 | 0.048 (3) | 0.028 (2) | 0.032 (2) | −0.017 (2) | 0.005 (2) | −0.001 (2) |
C9 | 0.032 (2) | 0.018 (2) | 0.033 (2) | −0.0085 (19) | −0.0006 (19) | −0.0039 (18) |
C10 | 0.024 (2) | 0.029 (2) | 0.025 (2) | −0.0147 (19) | 0.0019 (17) | −0.0097 (18) |
C11 | 0.036 (3) | 0.030 (2) | 0.026 (2) | −0.009 (2) | 0.0018 (19) | −0.0075 (19) |
C12 | 0.036 (3) | 0.049 (3) | 0.050 (3) | −0.012 (3) | 0.011 (2) | −0.028 (3) |
C13 | 0.046 (3) | 0.069 (4) | 0.037 (3) | −0.028 (3) | 0.019 (2) | −0.036 (3) |
C14 | 0.046 (3) | 0.064 (4) | 0.020 (2) | −0.030 (3) | 0.007 (2) | −0.016 (2) |
C15 | 0.036 (3) | 0.039 (3) | 0.021 (2) | −0.023 (2) | 0.0021 (18) | −0.0062 (19) |
C16 | 0.031 (2) | 0.028 (2) | 0.024 (2) | −0.018 (2) | −0.0026 (18) | −0.0012 (18) |
C17 | 0.037 (3) | 0.025 (2) | 0.035 (3) | −0.006 (2) | −0.009 (2) | 0.006 (2) |
C18 | 0.032 (2) | 0.023 (2) | 0.041 (3) | −0.009 (2) | 0.005 (2) | −0.003 (2) |
N1 | 0.0239 (18) | 0.0219 (18) | 0.0241 (18) | −0.0094 (15) | 0.0024 (14) | −0.0071 (15) |
N2 | 0.041 (2) | 0.032 (2) | 0.0208 (18) | −0.0159 (18) | 0.0025 (16) | −0.0005 (16) |
N3 | 0.0266 (19) | 0.0244 (19) | 0.0246 (18) | −0.0107 (16) | 0.0009 (14) | −0.0064 (15) |
N4 | 0.0250 (19) | 0.0222 (18) | 0.0219 (17) | −0.0082 (16) | −0.0014 (14) | −0.0055 (15) |
N5 | 0.041 (2) | 0.037 (2) | 0.0193 (18) | −0.0133 (19) | −0.0047 (16) | 0.0021 (16) |
N6 | 0.0179 (17) | 0.0263 (19) | 0.0310 (19) | −0.0096 (15) | 0.0020 (14) | −0.0075 (15) |
N7 | 0.0252 (12) | 0.0359 (15) | 0.043 (2) | −0.0149 (11) | 0.0013 (16) | −0.0121 (18) |
O1 | 0.0239 (13) | 0.0269 (14) | 0.0258 (14) | −0.0155 (10) | 0.0026 (12) | −0.0062 (12) |
O2 | 0.0180 (14) | 0.0258 (15) | 0.0295 (15) | −0.0068 (12) | 0.0002 (12) | −0.0075 (13) |
O3 | 0.0229 (14) | 0.0463 (19) | 0.0324 (16) | −0.0175 (14) | 0.0022 (13) | −0.0103 (14) |
O4 | 0.064 (2) | 0.050 (2) | 0.0339 (18) | −0.0329 (19) | −0.0067 (16) | 0.0074 (16) |
O5 | 0.050 (2) | 0.037 (2) | 0.064 (2) | −0.0182 (18) | −0.0146 (18) | −0.0055 (17) |
O6 | 0.047 (2) | 0.037 (2) | 0.059 (2) | −0.0079 (17) | 0.0078 (17) | −0.0037 (17) |
Co1—O1 | 1.928 (3) | C12—C13 | 1.379 (7) |
Co1—O2 | 1.930 (3) | C12—H12 | 0.9300 |
Co1—N4 | 1.948 (3) | C13—C14 | 1.375 (7) |
Co1—N6 | 1.949 (3) | C13—H13 | 0.9300 |
Co1—N1 | 1.953 (3) | C14—C15 | 1.392 (6) |
Co1—N3 | 1.957 (3) | C14—H14 | 0.9300 |
C1—C2 | 1.388 (6) | C15—N5 | 1.388 (6) |
C1—C6 | 1.400 (6) | C16—N4 | 1.337 (5) |
C1—N1 | 1.412 (5) | C16—N5 | 1.349 (5) |
C2—C3 | 1.383 (6) | C16—C17 | 1.483 (6) |
C2—H2A | 0.9300 | C17—C18 | 1.521 (6) |
C3—C4 | 1.404 (7) | C17—H17A | 0.9700 |
C3—H3 | 0.9300 | C17—H17B | 0.9700 |
C4—C5 | 1.360 (7) | C18—N6 | 1.491 (5) |
C4—H4 | 0.9300 | C18—H18A | 0.9700 |
C5—C6 | 1.399 (6) | C18—H18B | 0.9700 |
C5—H5A | 0.9300 | N2—H2 | 0.8600 |
C6—N2 | 1.372 (5) | N3—H3B | 0.9000 |
C7—N1 | 1.331 (5) | N3—H3C | 0.9000 |
C7—N2 | 1.351 (5) | N5—H5 | 0.8600 |
C7—C8 | 1.484 (6) | N6—H6A | 0.9000 |
C8—C9 | 1.504 (5) | N6—H6B | 0.9000 |
C8—H8A | 0.9700 | N7—O3 | 1.233 (4) |
C8—H8B | 0.9700 | N7—O2 | 1.319 (4) |
C9—N3 | 1.496 (5) | N7—O1 | 1.327 (4) |
C9—H9A | 0.9700 | O4—H1O4 | 0.8500 |
C9—H9B | 0.9700 | O4—H2O4 | 0.8496 |
C10—C11 | 1.383 (6) | O5—H1O5 | 0.8501 |
C10—C15 | 1.394 (5) | O5—H2O5 | 0.8500 |
C10—N4 | 1.419 (5) | O6—H1O6 | 0.8500 |
C11—C12 | 1.394 (6) | O6—H2O6 | 0.8499 |
C11—H11 | 0.9300 | ||
O1—Co1—O2 | 68.37 (12) | C14—C13—C12 | 121.3 (4) |
O1—Co1—N4 | 89.76 (12) | C14—C13—H13 | 119.3 |
O2—Co1—N4 | 92.05 (12) | C12—C13—H13 | 119.3 |
O1—Co1—N6 | 98.11 (13) | C13—C14—C15 | 116.5 (4) |
O2—Co1—N6 | 166.39 (13) | C13—C14—H14 | 121.7 |
N4—Co1—N6 | 89.37 (14) | C15—C14—H14 | 121.7 |
O1—Co1—N1 | 91.42 (12) | N5—C15—C14 | 131.0 (4) |
O2—Co1—N1 | 89.38 (12) | N5—C15—C10 | 106.1 (3) |
N4—Co1—N1 | 178.40 (14) | C14—C15—C10 | 122.9 (4) |
N6—Co1—N1 | 89.40 (13) | N4—C16—N5 | 111.3 (4) |
O1—Co1—N3 | 166.29 (13) | N4—C16—C17 | 128.0 (4) |
O2—Co1—N3 | 97.97 (13) | N5—C16—C17 | 120.6 (4) |
N4—Co1—N3 | 89.66 (13) | C16—C17—C18 | 115.8 (3) |
N6—Co1—N3 | 95.58 (14) | C16—C17—H17A | 108.3 |
N1—Co1—N3 | 89.44 (13) | C18—C17—H17A | 108.3 |
C2—C1—C6 | 120.0 (4) | C16—C17—H17B | 108.3 |
C2—C1—N1 | 132.3 (4) | C18—C17—H17B | 108.3 |
C6—C1—N1 | 107.7 (4) | H17A—C17—H17B | 107.4 |
C3—C2—C1 | 117.8 (4) | N6—C18—C17 | 111.2 (3) |
C3—C2—H2A | 121.1 | N6—C18—H18A | 109.4 |
C1—C2—H2A | 121.1 | C17—C18—H18A | 109.4 |
C2—C3—C4 | 121.4 (5) | N6—C18—H18B | 109.4 |
C2—C3—H3 | 119.3 | C17—C18—H18B | 109.4 |
C4—C3—H3 | 119.3 | H18A—C18—H18B | 108.0 |
C5—C4—C3 | 121.5 (4) | C7—N1—C1 | 106.1 (3) |
C5—C4—H4 | 119.2 | C7—N1—Co1 | 125.7 (3) |
C3—C4—H4 | 119.2 | C1—N1—Co1 | 128.2 (3) |
C4—C5—C6 | 117.2 (4) | C7—N2—C6 | 108.1 (3) |
C4—C5—H5A | 121.4 | C7—N2—H2 | 125.9 |
C6—C5—H5A | 121.4 | C6—N2—H2 | 125.9 |
N2—C6—C5 | 131.4 (4) | C9—N3—Co1 | 112.9 (2) |
N2—C6—C1 | 106.5 (3) | C9—N3—H3B | 109.0 |
C5—C6—C1 | 122.0 (4) | Co1—N3—H3B | 109.0 |
N1—C7—N2 | 111.6 (4) | C9—N3—H3C | 109.0 |
N1—C7—C8 | 127.2 (3) | Co1—N3—H3C | 109.0 |
N2—C7—C8 | 121.1 (4) | H3B—N3—H3C | 107.8 |
C7—C8—C9 | 116.8 (4) | C16—N4—C10 | 106.1 (3) |
C7—C8—H8A | 108.1 | C16—N4—Co1 | 125.6 (3) |
C9—C8—H8A | 108.1 | C10—N4—Co1 | 128.3 (3) |
C7—C8—H8B | 108.1 | C16—N5—C15 | 108.5 (3) |
C9—C8—H8B | 108.1 | C16—N5—H5 | 125.8 |
H8A—C8—H8B | 107.3 | C15—N5—H5 | 125.8 |
N3—C9—C8 | 111.6 (3) | C18—N6—Co1 | 113.3 (2) |
N3—C9—H9A | 109.3 | C18—N6—H6A | 108.9 |
C8—C9—H9A | 109.3 | Co1—N6—H6A | 108.9 |
N3—C9—H9B | 109.3 | C18—N6—H6B | 108.9 |
C8—C9—H9B | 109.3 | Co1—N6—H6B | 108.9 |
H9A—C9—H9B | 108.0 | H6A—N6—H6B | 107.7 |
C11—C10—C15 | 119.7 (4) | O3—N7—O2 | 125.0 (4) |
C11—C10—N4 | 132.3 (4) | O3—N7—O1 | 125.0 (4) |
C15—C10—N4 | 108.0 (4) | O2—N7—O1 | 110.0 (3) |
C10—C11—C12 | 117.4 (4) | N7—O1—Co1 | 90.7 (2) |
C10—C11—H11 | 121.3 | N7—O2—Co1 | 90.9 (2) |
C12—C11—H11 | 121.3 | H1O4—O4—H2O4 | 104.9 |
C13—C12—C11 | 122.1 (5) | H1O5—O5—H2O5 | 107.7 |
C13—C12—H12 | 118.9 | H1O6—O6—H2O6 | 107.7 |
C11—C12—H12 | 118.9 |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O4 | 0.86 | 1.91 | 2.757 (5) | 168 |
N3—H3B···Cl1i | 0.90 | 2.56 | 3.322 (3) | 143 |
N3—H3C···O3ii | 0.90 | 2.08 | 2.897 (4) | 150 |
N5—H5···Cl1iii | 0.86 | 2.29 | 3.148 (4) | 174 |
N6—H6A···O4i | 0.90 | 2.54 | 3.299 (5) | 142 |
N6—H6B···O3ii | 0.90 | 2.12 | 2.897 (4) | 145 |
O4—H1O4···O5 | 0.85 | 1.92 | 2.766 (4) | 179 |
O4—H2O4···O6iv | 0.85 | 1.93 | 2.781 (5) | 179 |
O5—H1O5···Cl1v | 0.85 | 2.41 | 3.189 (3) | 153 |
O5—H2O5···O1vi | 0.85 | 2.03 | 2.872 (4) | 174 |
O6—H1O6···O2 | 0.85 | 2.01 | 2.828 (4) | 162 |
O6—H2O6···Cl1vi | 0.85 | 2.34 | 3.192 (4) | 176 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) x+1, y, z; (iii) x, y, z+1; (iv) −x+1, −y+2, −z+1; (v) x−1, y+1, z; (vi) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Co(NO3)(C9H11N3)2]Cl·3H2O |
Mr | 532.85 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 7.408 (2), 9.808 (3), 17.280 (6) |
α, β, γ (°) | 76.238 (7), 89.203 (7), 67.867 (5) |
V (Å3) | 1125.6 (6) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.93 |
Crystal size (mm) | 0.28 × 0.27 × 0.26 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.780, 0.794 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5677, 3936, 2895 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.131, 0.99 |
No. of reflections | 3936 |
No. of parameters | 298 |
No. of restraints | 3 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.35, −0.86 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O4 | 0.86 | 1.91 | 2.757 (5) | 168 |
N3—H3B···Cl1i | 0.90 | 2.56 | 3.322 (3) | 143 |
N3—H3C···O3ii | 0.90 | 2.08 | 2.897 (4) | 150 |
N5—H5···Cl1iii | 0.86 | 2.29 | 3.148 (4) | 174 |
N6—H6A···O4i | 0.90 | 2.54 | 3.299 (5) | 142 |
N6—H6B···O3ii | 0.90 | 2.12 | 2.897 (4) | 145 |
O4—H1O4···O5 | 0.85 | 1.92 | 2.766 (4) | 179 |
O4—H2O4···O6iv | 0.85 | 1.93 | 2.781 (5) | 179 |
O5—H1O5···Cl1v | 0.85 | 2.41 | 3.189 (3) | 153 |
O5—H2O5···O1vi | 0.85 | 2.03 | 2.872 (4) | 174 |
O6—H1O6···O2 | 0.85 | 2.01 | 2.828 (4) | 162 |
O6—H2O6···Cl1vi | 0.85 | 2.34 | 3.192 (4) | 176 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) x+1, y, z; (iii) x, y, z+1; (iv) −x+1, −y+2, −z+1; (v) x−1, y+1, z; (vi) −x+1, −y+1, −z+1. |
Acknowledgements
This work was supported by the Youth Foundation of Hebei Normal University (No. L2006Q20).
References
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Cescon, L. A. & Day, A. R. (1962). J. Org. Chem. 27, 581–586. CrossRef CAS Google Scholar
Dash, A. C., Acharya, A. N. & Sahoo, R. (1995). Transition Met. Chem. 20, 147–152. CAS Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Téllez, F., López-Sandoval, H., Castillo-Blum, S. E. & Barba-Behrens, N. (2008). Arkivoc, (v), 245–275. Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Benzimidazole and 2-substituted benzimidazole derivatives are important heteroaromatic compounds acting as multidentate ligands towards transition metal ions in coordination chemistry (Téllez et al., 2008). 2-(2-Aminoethyl)benzimidazole is a bidentate ligand possessing two aromatic rings and can chelate a 3d transition-metal ion through two N atoms of the pendant aminoethyl group and the imidazole ring (Zhang et al., 2008). Furthermore, this ligand has a larger conjugated π-system than imidazole, which is expected to display a stability-enhancement due to the hydrophobic interaction with the substituted group of the amino acids or to be involved in aromatic ring π–π stacking effects with purine and pyrimidine bases. Based on the inherent characters of the benzimidazole group, a large number of studies have been reported on metal complexes of benzimidazole-based ligands (Dash et al., 1995). To our knowledge, CoII complexes with 2-(2-aminoethyl)benzimidazole ligand have not been reported. In this paper, we report the crystal structure of one such complex.
The title compound consists of a [Co(NO3)(C9H11N3)2]+ complex cation, a chloride anion and three hydrate solvent molecules. As shown in Fig. 1, two bidentate 2-(2-aminoethyl)benzimidazole ligands are coordinated to the CoII atom solely via two N atoms. A bidentate nitrate is coordinated to the CoII atom via two O atoms. The coordination geometry around the CoII atom is distorted octahedral, with bite angles of 68.37 (12)° for the nitrate anion and 89.44 (13) and 89.37 (14)° for the two bidentate ligands. The other cis bond angles at the CoII atom fall in the range of 89.37 (14)–98.11 (13)° and the trans bond angles are 166.29 (13), 166.39 (13) and 178.40 (14)°, suggesting a significant deviation from a perfect octahedral coordination. The Co—N bond lengths range from 1.948 (3) to 1.957 (3) Å, with an average of 1.952 (3) Å. The Co—O bond lengths are 1.928 (3) and 1.930 (3) Å. Extensive hydrogen bonds in the crystal, as shown in Fig. 2 and Table 1, link the complex cations, chloride anions and hydrate solvent molecules into a three-dimensional network.