metal-organic compounds
Tris(5,6-dimethyl-1H-benzimidazole-κN3)(pyridine-2,6-dicarboxylato-κ3O2,N,O6)nickel(II)
aCollege of Chemical Engineering, Hebei United University, Tangshan 063009, People's Republic of China, bCollege of Light Industry, Hebei United University, Tangshan 063009, People's Republic of China, and cQian'an College, Hebei United University, Tangshan 063009, People's Republic of China
*Correspondence e-mail: tsdgying@126.com
The title mononuclear complex, [Ni(C7H3NO4)(C9H10N2)3], shows a central NiII atom which is coordinated by two carboxylate O atoms and the N atom from a pyridine-2,6-dicarboxylate ligand and by three N atoms from different 5,6-dimethyl-1H-benzimidazole ligands in a distorted octahedral geometry. The shows intermolecular N—H⋯O hydrogen bonds.
Related literature
For related structures of dipicolinate complexes, see: How et al. (1991); Dong et al. (2010); Liu et al. (2011).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812019502/im2371sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812019502/im2371Isup2.hkl
A mixture of Ni(NO3)2.6H2O (290.8 mg, 0.5 mmol), 2,6-pyridinedicarboxylic acid (167 mg, 1 mmol), NaOH (80 mg, 2 mm mol), 5,6-dimethylbenzimidazole (73 mg, 0.5 mmol) and water (12 ml) was sealed in a 25 ml teflon-lined stainless steel reactor and heated to 413 K for 72 h. The reaction was cooled to room temperature over a period of 24 h. Green prismatic crystals of (I) suitable for X– ray difraction analysis were obtained with a yield of 38% (based Ni(NO3)2.6H2O).
All H atoms were positioned geometrically and refined using a riding model with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for aromatic H, N—H = 0.86 Å and Uiso(H) = 1.2Ueq(N) for the NH group.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Molecular structure of the title compound with displacement ellipsoids drawn at the 30% probability level. H atoms are presented as a small spheres of arbitrary radius. |
[Ni(C7H3NO4)(C9H10N2)3] | V = 1625.3 (3) Å3 |
Mr = 662.38 | Z = 2 |
Triclinic, P1 | F(000) = 692 |
Hall symbol: -P 1 | Dx = 1.353 Mg m−3 |
a = 7.5884 (7) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 9.4499 (9) Å | µ = 0.65 mm−1 |
c = 23.839 (2) Å | T = 293 K |
α = 89.0040 (9)° | Block, green |
β = 81.484 (1)° | 0.18 × 0.15 × 0.14 mm |
γ = 74.078 (1)° |
Bruker APEXII CCD diffractometer | 5721 independent reflections |
Radiation source: fine-focus sealed tube | 5078 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
ϕ and ω scans | θmax = 25.0°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
Tmin = 0.872, Tmax = 0.935 | k = −11→11 |
12396 measured reflections | l = −28→28 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.087 | H-atom parameters constrained |
S = 0.94 | w = 1/[σ2(Fo2) + (0.0503P)2 + 0.7157P] where P = (Fo2 + 2Fc2)/3 |
5721 reflections | (Δ/σ)max = 0.001 |
421 parameters | Δρmax = 0.27 e Å−3 |
0 restraints | Δρmin = −0.34 e Å−3 |
[Ni(C7H3NO4)(C9H10N2)3] | γ = 74.078 (1)° |
Mr = 662.38 | V = 1625.3 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.5884 (7) Å | Mo Kα radiation |
b = 9.4499 (9) Å | µ = 0.65 mm−1 |
c = 23.839 (2) Å | T = 293 K |
α = 89.0040 (9)° | 0.18 × 0.15 × 0.14 mm |
β = 81.484 (1)° |
Bruker APEXII CCD diffractometer | 5721 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 5078 reflections with I > 2σ(I) |
Tmin = 0.872, Tmax = 0.935 | Rint = 0.021 |
12396 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.087 | H-atom parameters constrained |
S = 0.94 | Δρmax = 0.27 e Å−3 |
5721 reflections | Δρmin = −0.34 e Å−3 |
421 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Ni1 | 0.99661 (3) | 0.63280 (2) | 0.222282 (9) | 0.02907 (9) | |
N1 | 0.9467 (2) | 0.84068 (16) | 0.19677 (6) | 0.0297 (3) | |
N4 | 0.8878 (2) | 0.57135 (18) | 0.15400 (7) | 0.0365 (4) | |
N2 | 1.1152 (2) | 0.68619 (17) | 0.29151 (7) | 0.0342 (4) | |
N6 | 1.0510 (2) | 0.41948 (17) | 0.24934 (7) | 0.0362 (4) | |
O3 | 0.71968 (17) | 0.73993 (13) | 0.26733 (6) | 0.0349 (3) | |
O2 | 1.24640 (17) | 0.62840 (15) | 0.16685 (6) | 0.0389 (3) | |
O4 | 0.51849 (18) | 0.96040 (15) | 0.28495 (7) | 0.0459 (4) | |
C23 | 0.9603 (3) | 0.1205 (2) | 0.33262 (9) | 0.0443 (5) | |
H23 | 1.0312 | 0.0285 | 0.3419 | 0.053* | |
C7 | 0.6658 (2) | 0.87699 (19) | 0.26080 (8) | 0.0313 (4) | |
C6 | 0.7936 (2) | 0.9412 (2) | 0.21938 (8) | 0.0318 (4) | |
C25 | 1.2158 (3) | 0.3253 (2) | 0.24373 (9) | 0.0423 (5) | |
H25 | 1.3208 | 0.3441 | 0.2232 | 0.051* | |
C9 | 1.0555 (3) | 0.6914 (2) | 0.35000 (8) | 0.0334 (4) | |
C1 | 1.0729 (3) | 0.8747 (2) | 0.15801 (8) | 0.0351 (4) | |
O1 | 1.3415 (2) | 0.7556 (2) | 0.09431 (7) | 0.0637 (5) | |
N7 | 1.2178 (2) | 0.19856 (18) | 0.27062 (8) | 0.0453 (4) | |
H7A | 1.3124 | 0.1237 | 0.2712 | 0.054* | |
C17 | 0.9343 (3) | 0.3497 (2) | 0.28265 (8) | 0.0337 (4) | |
N3 | 1.3074 (2) | 0.7679 (2) | 0.33549 (7) | 0.0439 (4) | |
H3A | 1.4004 | 0.7997 | 0.3400 | 0.053* | |
C8 | 1.2639 (3) | 0.7329 (2) | 0.28601 (9) | 0.0392 (5) | |
H8 | 1.3330 | 0.7411 | 0.2511 | 0.047* | |
C2 | 1.2345 (3) | 0.7425 (2) | 0.13747 (8) | 0.0393 (5) | |
C27 | 0.9756 (3) | 0.4677 (2) | 0.11018 (8) | 0.0343 (4) | |
C18 | 0.7458 (3) | 0.3971 (2) | 0.30265 (8) | 0.0370 (4) | |
H18 | 0.6745 | 0.4876 | 0.2922 | 0.044* | |
C28 | 1.1593 (3) | 0.3843 (2) | 0.09756 (8) | 0.0389 (4) | |
H28 | 1.2472 | 0.3954 | 0.1192 | 0.047* | |
C24 | 1.0398 (3) | 0.2113 (2) | 0.29699 (8) | 0.0385 (5) | |
C16 | 0.9040 (3) | 0.6554 (2) | 0.38086 (9) | 0.0408 (5) | |
H16 | 0.8247 | 0.6195 | 0.3625 | 0.049* | |
C19 | 0.6656 (3) | 0.3076 (2) | 0.33837 (9) | 0.0392 (5) | |
C34 | 0.8467 (3) | 0.4538 (2) | 0.07628 (9) | 0.0400 (5) | |
C10 | 1.1749 (3) | 0.7435 (2) | 0.37780 (9) | 0.0389 (4) | |
N5 | 0.6813 (2) | 0.5511 (2) | 0.10001 (8) | 0.0508 (5) | |
H5A | 0.5765 | 0.5671 | 0.0879 | 0.061* | |
C22 | 0.7744 (3) | 0.1691 (2) | 0.35405 (9) | 0.0426 (5) | |
C29 | 1.2092 (3) | 0.2845 (2) | 0.05225 (9) | 0.0441 (5) | |
C5 | 0.7630 (3) | 1.0872 (2) | 0.20455 (10) | 0.0462 (5) | |
H5 | 0.6570 | 1.1581 | 0.2207 | 0.055* | |
C3 | 1.0500 (3) | 1.0176 (3) | 0.14083 (10) | 0.0513 (6) | |
H3 | 1.1374 | 1.0417 | 0.1135 | 0.062* | |
C26 | 0.7146 (3) | 0.6156 (2) | 0.14517 (9) | 0.0457 (5) | |
H26 | 0.6236 | 0.6855 | 0.1682 | 0.055* | |
C14 | 0.7053 (4) | 0.6362 (4) | 0.47250 (12) | 0.0769 (8) | |
H14A | 0.6200 | 0.7242 | 0.4900 | 0.115* | |
H14B | 0.7447 | 0.5672 | 0.5013 | 0.115* | |
H14C | 0.6455 | 0.5934 | 0.4473 | 0.115* | |
C32 | 1.0753 (4) | 0.2693 (2) | 0.01906 (9) | 0.0498 (6) | |
C33 | 0.8945 (3) | 0.3547 (3) | 0.03046 (9) | 0.0502 (5) | |
H33 | 0.8070 | 0.3464 | 0.0082 | 0.060* | |
C15 | 0.8732 (3) | 0.6738 (3) | 0.43916 (9) | 0.0496 (5) | |
C11 | 1.1441 (3) | 0.7635 (3) | 0.43657 (9) | 0.0519 (6) | |
H11 | 1.2237 | 0.7997 | 0.4548 | 0.062* | |
C31 | 1.1298 (5) | 0.1571 (3) | −0.02934 (11) | 0.0750 (8) | |
H31A | 1.0250 | 0.1635 | −0.0484 | 0.112* | |
H31B | 1.1704 | 0.0601 | −0.0147 | 0.112* | |
H31C | 1.2287 | 0.1765 | −0.0556 | 0.112* | |
C12 | 0.9932 (4) | 0.7287 (3) | 0.46718 (9) | 0.0554 (6) | |
C4 | 0.8950 (4) | 1.1245 (3) | 0.16495 (11) | 0.0579 (6) | |
H4 | 0.8790 | 1.2220 | 0.1546 | 0.069* | |
C20 | 0.4618 (3) | 0.3609 (3) | 0.36204 (11) | 0.0574 (6) | |
H20A | 0.4480 | 0.3879 | 0.4014 | 0.086* | |
H20B | 0.4040 | 0.2837 | 0.3582 | 0.086* | |
H20C | 0.4039 | 0.4449 | 0.3415 | 0.086* | |
C13 | 0.9562 (5) | 0.7524 (4) | 0.53117 (11) | 0.0908 (10) | |
H13A | 1.0543 | 0.7846 | 0.5433 | 0.136* | |
H13B | 0.9503 | 0.6616 | 0.5491 | 0.136* | |
H13C | 0.8405 | 0.8258 | 0.5416 | 0.136* | |
C21 | 0.6875 (4) | 0.0748 (3) | 0.39503 (11) | 0.0608 (7) | |
H21A | 0.7793 | −0.0147 | 0.4009 | 0.091* | |
H21B | 0.5884 | 0.0518 | 0.3796 | 0.091* | |
H21C | 0.6395 | 0.1274 | 0.4306 | 0.091* | |
C30 | 1.4084 (4) | 0.1915 (3) | 0.03947 (11) | 0.0643 (7) | |
H30A | 1.4795 | 0.2179 | 0.0656 | 0.096* | |
H30B | 1.4592 | 0.2084 | 0.0014 | 0.096* | |
H30C | 1.4128 | 0.0894 | 0.0432 | 0.096* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.02265 (13) | 0.02596 (14) | 0.03356 (14) | −0.00152 (9) | 0.00148 (9) | 0.00487 (9) |
N1 | 0.0260 (8) | 0.0300 (8) | 0.0320 (8) | −0.0065 (6) | −0.0031 (6) | 0.0069 (6) |
N4 | 0.0296 (8) | 0.0356 (9) | 0.0405 (9) | −0.0043 (7) | −0.0027 (7) | 0.0024 (7) |
N2 | 0.0307 (8) | 0.0341 (8) | 0.0354 (9) | −0.0071 (7) | −0.0015 (7) | 0.0052 (7) |
N6 | 0.0329 (9) | 0.0284 (8) | 0.0421 (9) | −0.0010 (7) | −0.0037 (7) | 0.0052 (7) |
O3 | 0.0266 (6) | 0.0282 (7) | 0.0438 (8) | −0.0027 (5) | 0.0035 (5) | 0.0076 (6) |
O2 | 0.0274 (7) | 0.0441 (8) | 0.0395 (8) | −0.0039 (6) | 0.0022 (6) | 0.0033 (6) |
O4 | 0.0290 (7) | 0.0337 (8) | 0.0642 (10) | 0.0022 (6) | 0.0063 (7) | 0.0032 (7) |
C23 | 0.0577 (14) | 0.0256 (10) | 0.0444 (12) | −0.0020 (9) | −0.0101 (10) | 0.0061 (9) |
C7 | 0.0239 (9) | 0.0286 (10) | 0.0383 (10) | −0.0027 (7) | −0.0034 (8) | 0.0021 (8) |
C6 | 0.0295 (9) | 0.0275 (9) | 0.0364 (10) | −0.0046 (7) | −0.0052 (8) | 0.0052 (8) |
C25 | 0.0344 (11) | 0.0362 (11) | 0.0489 (12) | −0.0003 (9) | −0.0014 (9) | 0.0053 (9) |
C9 | 0.0337 (10) | 0.0284 (9) | 0.0345 (10) | −0.0037 (8) | −0.0036 (8) | 0.0041 (8) |
C1 | 0.0314 (10) | 0.0448 (11) | 0.0312 (10) | −0.0152 (8) | −0.0038 (8) | 0.0096 (8) |
O1 | 0.0379 (8) | 0.0897 (13) | 0.0485 (9) | −0.0043 (8) | 0.0132 (7) | 0.0230 (9) |
N7 | 0.0388 (10) | 0.0315 (9) | 0.0539 (11) | 0.0081 (7) | −0.0040 (8) | 0.0064 (8) |
C17 | 0.0397 (10) | 0.0241 (9) | 0.0354 (10) | −0.0049 (8) | −0.0071 (8) | 0.0027 (8) |
N3 | 0.0341 (9) | 0.0525 (11) | 0.0479 (10) | −0.0169 (8) | −0.0058 (8) | 0.0023 (8) |
C8 | 0.0336 (10) | 0.0428 (11) | 0.0391 (11) | −0.0106 (9) | 0.0006 (8) | 0.0053 (9) |
C2 | 0.0257 (10) | 0.0573 (13) | 0.0335 (10) | −0.0108 (9) | −0.0011 (8) | 0.0072 (9) |
C27 | 0.0384 (10) | 0.0300 (10) | 0.0337 (10) | −0.0101 (8) | −0.0026 (8) | 0.0073 (8) |
C18 | 0.0364 (10) | 0.0260 (9) | 0.0441 (11) | −0.0006 (8) | −0.0071 (9) | 0.0038 (8) |
C28 | 0.0390 (11) | 0.0367 (11) | 0.0387 (11) | −0.0091 (9) | −0.0010 (9) | 0.0034 (8) |
C24 | 0.0424 (11) | 0.0283 (10) | 0.0394 (11) | 0.0003 (8) | −0.0082 (9) | 0.0006 (8) |
C16 | 0.0403 (11) | 0.0423 (11) | 0.0398 (11) | −0.0138 (9) | −0.0016 (9) | 0.0052 (9) |
C19 | 0.0439 (11) | 0.0338 (10) | 0.0394 (11) | −0.0105 (9) | −0.0047 (9) | 0.0006 (8) |
C34 | 0.0427 (11) | 0.0402 (11) | 0.0395 (11) | −0.0150 (9) | −0.0081 (9) | 0.0096 (9) |
C10 | 0.0370 (11) | 0.0362 (11) | 0.0415 (11) | −0.0070 (8) | −0.0059 (9) | 0.0045 (9) |
N5 | 0.0359 (10) | 0.0623 (12) | 0.0540 (11) | −0.0091 (9) | −0.0143 (8) | 0.0018 (9) |
C22 | 0.0581 (14) | 0.0325 (11) | 0.0369 (11) | −0.0130 (10) | −0.0055 (10) | 0.0033 (9) |
C29 | 0.0530 (13) | 0.0370 (11) | 0.0373 (11) | −0.0109 (10) | 0.0059 (9) | 0.0028 (9) |
C5 | 0.0465 (12) | 0.0288 (10) | 0.0581 (14) | −0.0048 (9) | −0.0032 (10) | 0.0081 (9) |
C3 | 0.0533 (14) | 0.0510 (13) | 0.0524 (13) | −0.0238 (11) | −0.0008 (11) | 0.0204 (11) |
C26 | 0.0324 (11) | 0.0499 (13) | 0.0494 (13) | −0.0031 (9) | −0.0041 (9) | −0.0001 (10) |
C14 | 0.0722 (19) | 0.104 (2) | 0.0523 (15) | −0.0346 (17) | 0.0154 (13) | 0.0067 (15) |
C32 | 0.0753 (16) | 0.0429 (12) | 0.0329 (11) | −0.0229 (12) | −0.0008 (11) | 0.0032 (9) |
C33 | 0.0646 (15) | 0.0521 (13) | 0.0414 (12) | −0.0255 (12) | −0.0141 (11) | 0.0078 (10) |
C15 | 0.0527 (13) | 0.0550 (14) | 0.0378 (11) | −0.0146 (11) | 0.0026 (10) | 0.0069 (10) |
C11 | 0.0561 (14) | 0.0587 (14) | 0.0437 (12) | −0.0166 (11) | −0.0150 (11) | −0.0005 (10) |
C31 | 0.105 (2) | 0.0683 (18) | 0.0490 (15) | −0.0240 (17) | −0.0016 (15) | −0.0136 (13) |
C12 | 0.0630 (15) | 0.0625 (15) | 0.0365 (12) | −0.0121 (12) | −0.0042 (11) | 0.0030 (11) |
C4 | 0.0665 (16) | 0.0356 (12) | 0.0719 (16) | −0.0181 (11) | −0.0056 (13) | 0.0220 (11) |
C20 | 0.0497 (14) | 0.0542 (14) | 0.0639 (15) | −0.0128 (11) | 0.0020 (11) | 0.0094 (12) |
C13 | 0.107 (3) | 0.128 (3) | 0.0393 (15) | −0.039 (2) | −0.0024 (15) | −0.0056 (16) |
C21 | 0.0778 (18) | 0.0452 (14) | 0.0577 (15) | −0.0200 (12) | −0.0007 (13) | 0.0167 (11) |
C30 | 0.0601 (15) | 0.0596 (16) | 0.0592 (15) | −0.0043 (12) | 0.0143 (12) | −0.0126 (12) |
Ni1—N1 | 1.9976 (15) | C16—H16 | 0.9300 |
Ni1—N6 | 2.0561 (15) | C19—C22 | 1.420 (3) |
Ni1—N4 | 2.0886 (16) | C19—C20 | 1.513 (3) |
Ni1—N2 | 2.1227 (16) | C34—C33 | 1.390 (3) |
Ni1—O2 | 2.1348 (13) | C34—N5 | 1.384 (3) |
Ni1—O3 | 2.1901 (12) | C10—C11 | 1.393 (3) |
N1—C6 | 1.330 (2) | N5—C26 | 1.335 (3) |
N1—C1 | 1.331 (2) | N5—H5A | 0.8600 |
N4—C26 | 1.313 (3) | C22—C21 | 1.511 (3) |
N4—C27 | 1.402 (2) | C29—C32 | 1.414 (3) |
N2—C8 | 1.309 (3) | C29—C30 | 1.515 (3) |
N2—C9 | 1.398 (2) | C5—C4 | 1.386 (3) |
N6—C25 | 1.310 (2) | C5—H5 | 0.9300 |
N6—C17 | 1.394 (2) | C3—C4 | 1.379 (3) |
O3—C7 | 1.261 (2) | C3—H3 | 0.9300 |
O2—C2 | 1.265 (2) | C26—H26 | 0.9300 |
O4—C7 | 1.243 (2) | C14—C15 | 1.523 (3) |
C23—C22 | 1.379 (3) | C14—H14A | 0.9600 |
C23—C24 | 1.389 (3) | C14—H14B | 0.9600 |
C23—H23 | 0.9300 | C14—H14C | 0.9600 |
C7—C6 | 1.517 (3) | C32—C33 | 1.378 (3) |
C6—C5 | 1.384 (3) | C32—C31 | 1.512 (3) |
C25—N7 | 1.346 (3) | C33—H33 | 0.9300 |
C25—H25 | 0.9300 | C15—C12 | 1.413 (3) |
C9—C10 | 1.391 (3) | C11—C12 | 1.379 (3) |
C9—C16 | 1.391 (3) | C11—H11 | 0.9300 |
C1—C3 | 1.377 (3) | C31—H31A | 0.9600 |
C1—C2 | 1.518 (3) | C31—H31B | 0.9600 |
O1—C2 | 1.239 (2) | C31—H31C | 0.9600 |
N7—C24 | 1.377 (3) | C12—C13 | 1.519 (3) |
N7—H7A | 0.8600 | C4—H4 | 0.9300 |
C17—C18 | 1.389 (3) | C20—H20A | 0.9600 |
C17—C24 | 1.400 (3) | C20—H20B | 0.9600 |
N3—C8 | 1.341 (3) | C20—H20C | 0.9600 |
N3—C10 | 1.379 (3) | C13—H13A | 0.9600 |
N3—H3A | 0.8600 | C13—H13B | 0.9600 |
C8—H8 | 0.9300 | C13—H13C | 0.9600 |
C27—C28 | 1.391 (3) | C21—H21A | 0.9600 |
C27—C34 | 1.391 (3) | C21—H21B | 0.9600 |
C18—C19 | 1.384 (3) | C21—H21C | 0.9600 |
C18—H18 | 0.9300 | C30—H30A | 0.9600 |
C28—C29 | 1.385 (3) | C30—H30B | 0.9600 |
C28—H28 | 0.9300 | C30—H30C | 0.9600 |
C16—C15 | 1.381 (3) | ||
N1—Ni1—N6 | 179.06 (6) | C22—C19—C20 | 120.27 (19) |
N1—Ni1—N4 | 91.46 (6) | C33—C34—N5 | 133.1 (2) |
N6—Ni1—N4 | 89.43 (6) | C33—C34—C27 | 121.8 (2) |
N1—Ni1—N2 | 90.59 (6) | N5—C34—C27 | 105.10 (18) |
N6—Ni1—N2 | 88.51 (6) | N3—C10—C9 | 105.30 (17) |
N4—Ni1—N2 | 177.57 (6) | N3—C10—C11 | 133.4 (2) |
N1—Ni1—O2 | 77.98 (6) | C9—C10—C11 | 121.2 (2) |
N6—Ni1—O2 | 101.73 (6) | C26—N5—C34 | 107.34 (17) |
N4—Ni1—O2 | 89.53 (6) | C26—N5—H5A | 126.3 |
N2—Ni1—O2 | 89.62 (6) | C34—N5—H5A | 126.3 |
N1—Ni1—O3 | 76.12 (5) | C23—C22—C19 | 120.33 (19) |
N6—Ni1—O3 | 104.15 (6) | C23—C22—C21 | 119.6 (2) |
N4—Ni1—O3 | 92.00 (6) | C19—C22—C21 | 120.1 (2) |
N2—Ni1—O3 | 89.76 (6) | C28—C29—C32 | 120.3 (2) |
O2—Ni1—O3 | 154.09 (5) | C28—C29—C30 | 118.8 (2) |
C6—N1—C1 | 121.90 (16) | C32—C29—C30 | 120.9 (2) |
C6—N1—Ni1 | 120.19 (12) | C6—C5—C4 | 118.0 (2) |
C1—N1—Ni1 | 117.88 (13) | C6—C5—H5 | 121.0 |
C26—N4—C27 | 104.39 (17) | C4—C5—H5 | 121.0 |
C26—N4—Ni1 | 126.53 (14) | C1—C3—C4 | 118.7 (2) |
C27—N4—Ni1 | 128.93 (13) | C1—C3—H3 | 120.7 |
C8—N2—C9 | 104.53 (16) | C4—C3—H3 | 120.7 |
C8—N2—Ni1 | 124.08 (14) | N4—C26—N5 | 113.77 (19) |
C9—N2—Ni1 | 131.26 (13) | N4—C26—H26 | 123.1 |
C25—N6—C17 | 105.31 (16) | N5—C26—H26 | 123.1 |
C25—N6—Ni1 | 124.83 (14) | C15—C14—H14A | 109.5 |
C17—N6—Ni1 | 129.39 (12) | C15—C14—H14B | 109.5 |
C7—O3—Ni1 | 114.55 (11) | H14A—C14—H14B | 109.5 |
C2—O2—Ni1 | 113.29 (12) | C15—C14—H14C | 109.5 |
C22—C23—C24 | 118.82 (18) | H14A—C14—H14C | 109.5 |
C22—C23—H23 | 120.6 | H14B—C14—H14C | 109.5 |
C24—C23—H23 | 120.6 | C33—C32—C29 | 120.9 (2) |
O4—C7—O3 | 125.25 (17) | C33—C32—C31 | 119.2 (2) |
O4—C7—C6 | 118.94 (16) | C29—C32—C31 | 119.9 (2) |
O3—C7—C6 | 115.81 (15) | C32—C33—C34 | 118.1 (2) |
N1—C6—C5 | 120.68 (18) | C32—C33—H33 | 121.0 |
N1—C6—C7 | 112.95 (15) | C34—C33—H33 | 121.0 |
C5—C6—C7 | 126.36 (17) | C16—C15—C12 | 120.6 (2) |
N6—C25—N7 | 113.26 (19) | C16—C15—C14 | 118.6 (2) |
N6—C25—H25 | 123.4 | C12—C15—C14 | 120.7 (2) |
N7—C25—H25 | 123.4 | C12—C11—C10 | 118.6 (2) |
C10—C9—C16 | 120.18 (18) | C12—C11—H11 | 120.7 |
C10—C9—N2 | 109.36 (17) | C10—C11—H11 | 120.7 |
C16—C9—N2 | 130.46 (18) | C32—C31—H31A | 109.5 |
N1—C1—C3 | 120.40 (19) | C32—C31—H31B | 109.5 |
N1—C1—C2 | 112.89 (16) | H31A—C31—H31B | 109.5 |
C3—C1—C2 | 126.71 (18) | C32—C31—H31C | 109.5 |
C25—N7—C24 | 107.06 (16) | H31A—C31—H31C | 109.5 |
C25—N7—H7A | 126.5 | H31B—C31—H31C | 109.5 |
C24—N7—H7A | 126.5 | C11—C12—C15 | 120.3 (2) |
C18—C17—N6 | 131.03 (17) | C11—C12—C13 | 119.2 (2) |
C18—C17—C24 | 120.27 (18) | C15—C12—C13 | 120.5 (2) |
N6—C17—C24 | 108.68 (17) | C3—C4—C5 | 120.3 (2) |
C8—N3—C10 | 107.15 (17) | C3—C4—H4 | 119.8 |
C8—N3—H3A | 126.4 | C5—C4—H4 | 119.8 |
C10—N3—H3A | 126.4 | C19—C20—H20A | 109.5 |
N2—C8—N3 | 113.66 (18) | C19—C20—H20B | 109.5 |
N2—C8—H8 | 123.2 | H20A—C20—H20B | 109.5 |
N3—C8—H8 | 123.2 | C19—C20—H20C | 109.5 |
O1—C2—O2 | 126.2 (2) | H20A—C20—H20C | 109.5 |
O1—C2—C1 | 118.03 (19) | H20B—C20—H20C | 109.5 |
O2—C2—C1 | 115.77 (16) | C12—C13—H13A | 109.5 |
C28—C27—C34 | 119.94 (18) | C12—C13—H13B | 109.5 |
C28—C27—N4 | 130.66 (18) | H13A—C13—H13B | 109.5 |
C34—C27—N4 | 109.40 (17) | C12—C13—H13C | 109.5 |
C19—C18—C17 | 119.02 (17) | H13A—C13—H13C | 109.5 |
C19—C18—H18 | 120.5 | H13B—C13—H13C | 109.5 |
C17—C18—H18 | 120.5 | C22—C21—H21A | 109.5 |
C29—C28—C27 | 119.0 (2) | C22—C21—H21B | 109.5 |
C29—C28—H28 | 120.5 | H21A—C21—H21B | 109.5 |
C27—C28—H28 | 120.5 | C22—C21—H21C | 109.5 |
N7—C24—C23 | 133.22 (18) | H21A—C21—H21C | 109.5 |
N7—C24—C17 | 105.66 (17) | H21B—C21—H21C | 109.5 |
C23—C24—C17 | 121.09 (19) | C29—C30—H30A | 109.5 |
C15—C16—C9 | 119.0 (2) | C29—C30—H30B | 109.5 |
C15—C16—H16 | 120.5 | H30A—C30—H30B | 109.5 |
C9—C16—H16 | 120.5 | C29—C30—H30C | 109.5 |
C18—C19—C22 | 120.42 (19) | H30A—C30—H30C | 109.5 |
C18—C19—C20 | 119.28 (18) | H30B—C30—H30C | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O4i | 0.86 | 2.27 | 2.877 (2) | 127 |
N5—H5A···O1ii | 0.86 | 2.14 | 2.786 (2) | 132 |
N7—H7A···O4iii | 0.86 | 1.94 | 2.788 (2) | 171 |
Symmetry codes: (i) x+1, y, z; (ii) x−1, y, z; (iii) x+1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | [Ni(C7H3NO4)(C9H10N2)3] |
Mr | 662.38 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 7.5884 (7), 9.4499 (9), 23.839 (2) |
α, β, γ (°) | 89.0040 (9), 81.484 (1), 74.078 (1) |
V (Å3) | 1625.3 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.65 |
Crystal size (mm) | 0.18 × 0.15 × 0.14 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.872, 0.935 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12396, 5721, 5078 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.087, 0.94 |
No. of reflections | 5721 |
No. of parameters | 421 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.27, −0.34 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O4i | 0.86 | 2.27 | 2.877 (2) | 127 |
N5—H5A···O1ii | 0.86 | 2.14 | 2.786 (2) | 132 |
N7—H7A···O4iii | 0.86 | 1.94 | 2.788 (2) | 171 |
Symmetry codes: (i) x+1, y, z; (ii) x−1, y, z; (iii) x+1, y−1, z. |
Acknowledgements
The authors thank Hebei United University for supporting this work.
References
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Dong, G.-Y., Fan, L.-H., Yang, L.-X. & Khan, I. U. (2010). Acta Cryst. E66, m532. Web of Science CSD CrossRef IUCr Journals Google Scholar
How, G. A., Whei, L. K., Graeme, R. H., Jeffrey, A. C., Mary, M. & Nick, C. (1991). J. Chem. Soc. Dalton Trans. pp. 3193–3291. Google Scholar
Liu, T. F., Wu, W. F., Wan, C. Q., He, C. H., Jiao, C. H. & Cui, G. H. (2011). J. Coord. Chem. 64, 975–986. Web of Science CSD CrossRef CAS Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Benzimidazole and its derivatives are widely used as intermediates in synthesis and commonly coordinate to transition metals by N atom. Some Cu(II) dipicolinate complexes with additional imidazole ligands have been reported (How et al., 1991; Dong et al., 2010; Liu et al., 2011). Here, we report the crystal structure of the title compound.
The asymmetric unit of (I) contains one nickel(II), one 2,6- pyridinedicarboxylato and three 5,6-dimethylbenzimidazole ligands. The nickel center is six-coordinated in a distorted octahedral coordination geometry (Fig.1). Each nickel(II) is coordinated by one tridentate dipicolinato ligand via its carboxylate oxygen atoms and the pyridine nitrogen atom as donors (Ni1—N1= 1.997 (2); Ni1—O2=2.134 (1); Ni1—O3= 2.190 (1) Å). Three additional N donor atoms from three 5,6-dimethylbenzimidazole ligands complete the coordination sphere of nickel (Ni1- N from 2.056 (2) to 2.123 (2) Å). It is noteworthy that there exist strong N—H···O hydrogen bond interactions (Table 1) involving the carboxy group oxygen atoms of dipicolinato ligands as well as the NH functions of the benzimidazole ligands.