organic compounds
3,5-Bis(4-fluorophenyl)isoxazole
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bDepartment of Studies in Chemistry, Mangalore University, Mangalagangotri 574 199, India, and cDepartment of Chemistry, P. A. College of Engineering, Nadupadavu, Mangalore 574 153, India
*Correspondence e-mail: hkfun@usm.my
In the 15H9F2NO, the complete molecule is generated by a crystallographic twofold rotation axis and the O and N atoms of the central isoxazole ring are statistically disordered with equal site occupancies. The terminal benzene rings form a dihedral angle of 24.23 (3)° with the isoxazole ring. The dihedral angle between the benzene rings is 47.39 (2)°. No significant intermolecular interactions are observed.
of the title compound, CRelated literature
For the pharmacological activity of isoxazole derivatives, see; Pradeepkumar et al. (2011). For our work on the synthesis of different derivatives of 4,4′-difluoro chalcone, see: Fun et al. (2010a,b). For stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S160053681202171X/is5139sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681202171X/is5139Isup2.hkl
Supporting information file. DOI: 10.1107/S160053681202171X/is5139Isup3.cml
A solution of 4,4'-difluoro chalcone (2.44 g, 0.01 mol) and hydroxylamine hydrochloride (0.695 g, 0.01 mol) in 25 ml ethanol containing 3 ml of 10% sodium hydroxide solution was refluxed for 12 h. The reaction mixture was cooled and poured into 50 ml ice-cold water. The precipitate formed was collected by filtration and purified by recrystallization from ethanol. The single crystals were grown from a DMF solution by slow evaporation method and yield of the compound was 59%. (M. p. 463 K).
The
is disordered at atom N1 and O1 with refined site of occupancies closed to 0.5. In the final the ratio was fixed at 0.5: 0.5. All the H atoms were positioned geometrically (C—H = 0.95 Å) and refined using a riding model with Uiso(H) = 1.2Ueq(C). The same atomic coordinates and displacement parameters were used for atom pair O1/N1. Three outliers (2 0 0), (5 1 3) and (9 1 1) were omitted.Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C15H9F2NO | F(000) = 528 |
Mr = 257.23 | Dx = 1.531 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 7031 reflections |
a = 27.9097 (4) Å | θ = 3.0–35.2° |
b = 5.7319 (1) Å | µ = 0.12 mm−1 |
c = 7.1437 (1) Å | T = 100 K |
β = 102.473 (1)° | Block, colourless |
V = 1115.84 (3) Å3 | 0.30 × 0.24 × 0.12 mm |
Z = 4 |
Bruker SMART APEXII CCD area-detector diffractometer | 2483 independent reflections |
Radiation source: fine-focus sealed tube | 2175 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
ϕ and ω scans | θmax = 35.2°, θmin = 3.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −44→44 |
Tmin = 0.965, Tmax = 0.986 | k = −9→9 |
17407 measured reflections | l = −11→11 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.131 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0728P)2 + 0.6036P] where P = (Fo2 + 2Fc2)/3 |
2483 reflections | (Δ/σ)max < 0.001 |
87 parameters | Δρmax = 0.62 e Å−3 |
0 restraints | Δρmin = −0.31 e Å−3 |
C15H9F2NO | V = 1115.84 (3) Å3 |
Mr = 257.23 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 27.9097 (4) Å | µ = 0.12 mm−1 |
b = 5.7319 (1) Å | T = 100 K |
c = 7.1437 (1) Å | 0.30 × 0.24 × 0.12 mm |
β = 102.473 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 2483 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 2175 reflections with I > 2σ(I) |
Tmin = 0.965, Tmax = 0.986 | Rint = 0.024 |
17407 measured reflections |
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.131 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.62 e Å−3 |
2483 reflections | Δρmin = −0.31 e Å−3 |
87 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
F1 | 0.26779 (2) | 0.15964 (11) | −0.19266 (9) | 0.02342 (15) | |
O1 | 0.47501 (2) | 0.57010 (12) | 0.20224 (10) | 0.01759 (15) | 0.50 |
N1 | 0.47501 (2) | 0.57010 (12) | 0.20224 (10) | 0.01759 (15) | 0.50 |
C1 | 0.39839 (3) | 0.08546 (14) | −0.01408 (11) | 0.01434 (15) | |
H1A | 0.4233 | −0.0272 | −0.0145 | 0.017* | |
C2 | 0.35018 (3) | 0.03736 (14) | −0.10665 (11) | 0.01517 (15) | |
H2A | 0.3419 | −0.1066 | −0.1714 | 0.018* | |
C3 | 0.31471 (3) | 0.20453 (15) | −0.10192 (11) | 0.01495 (15) | |
C4 | 0.32494 (3) | 0.41685 (14) | −0.00912 (12) | 0.01460 (15) | |
H4A | 0.2997 | 0.5274 | −0.0076 | 0.018* | |
C5 | 0.37327 (3) | 0.46326 (13) | 0.08167 (11) | 0.01285 (14) | |
H5A | 0.3813 | 0.6079 | 0.1457 | 0.015* | |
C6 | 0.41029 (3) | 0.29891 (13) | 0.07965 (11) | 0.01230 (14) | |
C7 | 0.46118 (3) | 0.34794 (14) | 0.17574 (12) | 0.01458 (15) | |
C8 | 0.5000 | 0.1978 (2) | 0.2500 | 0.01459 (19) | |
H8A | 0.5000 | 0.0321 | 0.2500 | 0.018* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.0136 (2) | 0.0260 (3) | 0.0270 (3) | −0.00518 (19) | −0.0038 (2) | −0.0017 (2) |
O1 | 0.0133 (3) | 0.0143 (3) | 0.0232 (3) | 0.0005 (2) | −0.0006 (2) | −0.0005 (2) |
N1 | 0.0133 (3) | 0.0143 (3) | 0.0232 (3) | 0.0005 (2) | −0.0006 (2) | −0.0005 (2) |
C1 | 0.0150 (3) | 0.0134 (3) | 0.0145 (3) | 0.0011 (2) | 0.0030 (2) | −0.0003 (2) |
C2 | 0.0175 (3) | 0.0129 (3) | 0.0144 (3) | −0.0023 (2) | 0.0019 (2) | −0.0012 (2) |
C3 | 0.0123 (3) | 0.0169 (3) | 0.0144 (3) | −0.0033 (2) | 0.0001 (2) | 0.0006 (2) |
C4 | 0.0121 (3) | 0.0146 (3) | 0.0163 (3) | 0.0012 (2) | 0.0014 (2) | 0.0008 (2) |
C5 | 0.0126 (3) | 0.0119 (3) | 0.0136 (3) | 0.0002 (2) | 0.0018 (2) | −0.0004 (2) |
C6 | 0.0115 (3) | 0.0129 (3) | 0.0121 (3) | 0.0002 (2) | 0.0016 (2) | 0.0005 (2) |
C7 | 0.0121 (3) | 0.0170 (3) | 0.0141 (3) | −0.0007 (2) | 0.0020 (2) | 0.0000 (2) |
C8 | 0.0128 (4) | 0.0139 (4) | 0.0164 (4) | 0.000 | 0.0016 (3) | 0.000 |
F1—C3 | 1.3546 (9) | C4—C5 | 1.3903 (10) |
O1—C7 | 1.3322 (10) | C4—H4A | 0.9500 |
O1—N1i | 1.4145 (13) | C5—C6 | 1.4006 (11) |
C1—C2 | 1.3926 (11) | C5—H5A | 0.9500 |
C1—C6 | 1.3998 (11) | C6—C7 | 1.4650 (11) |
C1—H1A | 0.9500 | C7—C8 | 1.3955 (10) |
C2—C3 | 1.3833 (12) | C8—C7i | 1.3955 (10) |
C2—H2A | 0.9500 | C8—H8A | 0.9500 |
C3—C4 | 1.3858 (12) | ||
C7—O1—N1i | 107.08 (4) | C5—C4—H4A | 121.0 |
C7—O1—O1i | 107.08 (4) | C4—C5—C6 | 120.66 (7) |
C2—C1—C6 | 120.36 (7) | C4—C5—H5A | 119.7 |
C2—C1—H1A | 119.8 | C6—C5—H5A | 119.7 |
C6—C1—H1A | 119.8 | C1—C6—C5 | 119.56 (7) |
C3—C2—C1 | 118.31 (7) | C1—C6—C7 | 119.85 (7) |
C3—C2—H2A | 120.8 | C5—C6—C7 | 120.58 (7) |
C1—C2—H2A | 120.8 | O1—C7—C8 | 110.98 (7) |
F1—C3—C2 | 118.66 (7) | O1—C7—C6 | 118.14 (7) |
F1—C3—C4 | 118.28 (7) | C8—C7—C6 | 130.87 (8) |
C2—C3—C4 | 123.06 (7) | C7—C8—C7i | 103.86 (10) |
C3—C4—C5 | 118.04 (7) | C7—C8—H8A | 128.1 |
C3—C4—H4A | 121.0 | C7i—C8—H8A | 128.1 |
C6—C1—C2—C3 | −0.49 (12) | N1i—O1—C7—C8 | 0.05 (10) |
C1—C2—C3—F1 | 179.59 (7) | O1i—O1—C7—C8 | 0.05 (10) |
C1—C2—C3—C4 | −0.16 (12) | N1i—O1—C7—C6 | 179.64 (8) |
F1—C3—C4—C5 | −179.18 (7) | O1i—O1—C7—C6 | 179.64 (8) |
C2—C3—C4—C5 | 0.57 (12) | C1—C6—C7—O1 | 156.29 (8) |
C3—C4—C5—C6 | −0.34 (12) | C5—C6—C7—O1 | −24.13 (11) |
C2—C1—C6—C5 | 0.71 (12) | C1—C6—C7—C8 | −24.21 (12) |
C2—C1—C6—C7 | −179.70 (7) | C5—C6—C7—C8 | 155.37 (7) |
C4—C5—C6—C1 | −0.29 (12) | O1—C7—C8—C7i | −0.02 (4) |
C4—C5—C6—C7 | −179.87 (7) | C6—C7—C8—C7i | −179.55 (10) |
Symmetry code: (i) −x+1, y, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C15H9F2NO |
Mr | 257.23 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 100 |
a, b, c (Å) | 27.9097 (4), 5.7319 (1), 7.1437 (1) |
β (°) | 102.473 (1) |
V (Å3) | 1115.84 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.30 × 0.24 × 0.12 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.965, 0.986 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 17407, 2483, 2175 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.812 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.131, 1.09 |
No. of reflections | 2483 |
No. of parameters | 87 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.62, −0.31 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Footnotes
‡Thomson Reuters ResearcherID: A-3561-2009.
Acknowledgements
HKF and SA thank Universiti Sains Malaysia (USM) for the Research University Grant (1001/PFIZIK/811160). SA also thanks the Malaysian Government and USM for the Academic Staff Training Scheme (ASTS) award. BN thanks the UGC for financial assistance through the SAP and BSR one-time grant for the purchase of chemicals. SS thanks Mangalore University for the research facilities.
References
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The various pharmacological activities of isoxazole derivatives are well documented (Pradeepkumar et al., 2011). Hence, in view of the importance of isoxazoles and in continuation of our work on synthesis of various derivatives of of 4,4'-difluoro chalcone (Fun et al., 2010a,b), the title compound was prepared and its crystal structure is reported.
The asymmetric unit of the title molecule (Figs. 1 and 2), C15H9F2NO, contains one half-molecule with the other half of the molecule being generated by a twofold rotation axis (-x + 1, y, -z + 1/2). The crystal structure is disordered with the O1 and the N1 atoms attached at the same position with half occupancies each, forming the central isoxazole ring. The fluoro-substituted benzene rings (C1–C6 & C1A–C6A) make a dihedral angle of 24.23 (3)° with the isoxazole ring (N1/O1A/C7/C7A/C8 or O1/N1A/C7/C7A/C8). The dihedral angle between the fluoro-substituted benzene rings is 47.39 (2)°. The bond lengths and angles are within normal ranges. The crystal packing is shown in Fig. 3. No significant intermolecular interactions were observed.