metal-organic compounds
Tris(1H-benzimidazole-κN3)(pyridine-2,6-dicarboxylato-κ3O2,N,O6)nickel(II)
aCollege of Chemical Engineering, Hebei United University, Tangshan 063009, People's Republic of China, bCollege of Light Industry, Hebei United University, Tangshan 063009, People's Republic of China, and cQian'an College, Hebei United University, Tangshan 063009, People's Republic of China
*Correspondence e-mail: tsdgying@126.com
In the title complex, [Ni(C7H3NO4)(C7H6N2)3], the NiII ion is coordinated by two carboxylate O atoms and the N atom from a pyridine-2,6-dicarboxylate ligand and by three N atoms from three benzimidazole ligands to form a slightly distorted octahedral geometry. In the crystal, molecules are linked by N—H⋯O hydrogen bonds to form a three-dimensional network.
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812019514/lh5462sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812019514/lh5462Isup2.hkl
Nickel(II) hydroxide (92.7 mg, 1 mmol) was mixed with a 15 ml aqueous solution of dipicoline acid (334 mg, 2 mmol) in a steam bath until the solid disappeared. The methanol solution (10 ml) of benzimidazole (472 mg, 4 mmol) was then added to the above solution. The resultant green solution was warmed on a steam bath for 1.5 h. The solution was filtered and allowed to stand at room temperature. Green crystals suitable for X-ray diffraction were obtained after 15 days.
All H atoms were positioned geometrically an refined using a riding model with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for aromatic H, N—H = 0.86 Å and Uiso(H) = 1.2Ueq(N) for the NH group.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title compound with displacement ellipsoids drawn at 30% probability level. H atoms are presented as a small spheres of arbitrary radius. |
[Ni(C7H3NO4)(C7H6N2)3] | Z = 4 |
Mr = 578.21 | F(000) = 1192 |
Monoclinic, P21/c | Dx = 1.424 Mg m−3 |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 9.4546 (19) Å | µ = 0.77 mm−1 |
b = 10.487 (2) Å | T = 298 K |
c = 27.532 (5) Å | Block, green |
β = 98.94 (3)° | 0.10 × 0.10 × 0.10 mm |
V = 2696.7 (9) Å3 |
Bruker APEXII CCD diffractometer | 4752 independent reflections |
Radiation source: fine-focus sealed tube | 2842 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.153 |
ϕ and ω scans | θmax = 25.0°, θmin = 3.0° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −11→11 |
Tmin = 0.934, Tmax = 0.934 | k = −12→12 |
21674 measured reflections | l = −32→32 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.086 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.143 | H-atom parameters constrained |
S = 1.12 | w = 1/[σ2(Fo2) + (0.0345P)2 + 1.7256P] where P = (Fo2 + 2Fc2)/3 |
4752 reflections | (Δ/σ)max = 0.004 |
361 parameters | Δρmax = 0.33 e Å−3 |
0 restraints | Δρmin = −0.32 e Å−3 |
[Ni(C7H3NO4)(C7H6N2)3] | V = 2696.7 (9) Å3 |
Mr = 578.21 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.4546 (19) Å | µ = 0.77 mm−1 |
b = 10.487 (2) Å | T = 298 K |
c = 27.532 (5) Å | 0.10 × 0.10 × 0.10 mm |
β = 98.94 (3)° |
Bruker APEXII CCD diffractometer | 4752 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2842 reflections with I > 2σ(I) |
Tmin = 0.934, Tmax = 0.934 | Rint = 0.153 |
21674 measured reflections |
R[F2 > 2σ(F2)] = 0.086 | 0 restraints |
wR(F2) = 0.143 | H-atom parameters constrained |
S = 1.12 | Δρmax = 0.33 e Å−3 |
4752 reflections | Δρmin = −0.32 e Å−3 |
361 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Ni1 | 0.09815 (7) | 0.43868 (7) | 0.38239 (2) | 0.0360 (2) | |
O1 | 0.1890 (4) | 0.3672 (3) | 0.45593 (12) | 0.0401 (10) | |
O2 | 0.3778 (4) | 0.2602 (4) | 0.49567 (13) | 0.0502 (11) | |
O4 | 0.2432 (4) | 0.4481 (4) | 0.24837 (14) | 0.0621 (12) | |
N1 | −0.0148 (5) | 0.2663 (4) | 0.36705 (16) | 0.0394 (12) | |
N7 | 0.2861 (4) | 0.3605 (4) | 0.37243 (16) | 0.0337 (11) | |
O3 | 0.1016 (4) | 0.4723 (3) | 0.30609 (12) | 0.0415 (10) | |
N3 | 0.2048 (5) | 0.6140 (4) | 0.40368 (16) | 0.0404 (12) | |
N5 | −0.0917 (4) | 0.5276 (4) | 0.39039 (17) | 0.0407 (12) | |
C9 | 0.3706 (6) | 0.3067 (5) | 0.4103 (2) | 0.0360 (14) | |
C10 | −0.2085 (6) | 0.5587 (5) | 0.35471 (19) | 0.0393 (14) | |
C11 | 0.3074 (6) | 0.3110 (5) | 0.4579 (2) | 0.0380 (14) | |
C12 | 0.4561 (6) | 0.3234 (5) | 0.3201 (2) | 0.0525 (17) | |
H12A | 0.4830 | 0.3293 | 0.2890 | 0.063* | |
C13 | −0.0723 (6) | 0.1829 (5) | 0.3985 (2) | 0.0387 (14) | |
N4 | 0.3530 (5) | 0.7511 (5) | 0.44750 (18) | 0.0543 (14) | |
H4A | 0.4155 | 0.7799 | 0.4710 | 0.065* | |
C15 | −0.1244 (6) | 0.5731 (6) | 0.4318 (2) | 0.0471 (16) | |
H15A | −0.0643 | 0.5670 | 0.4619 | 0.057* | |
C16 | 0.1950 (6) | 0.7325 (5) | 0.3796 (2) | 0.0415 (15) | |
C17 | 0.2152 (6) | 0.4356 (5) | 0.2902 (2) | 0.0413 (14) | |
N2 | −0.1251 (5) | 0.1077 (5) | 0.32270 (18) | 0.0532 (14) | |
H2A | −0.1576 | 0.0625 | 0.2973 | 0.064* | |
C19 | −0.1402 (6) | 0.0824 (6) | 0.3708 (2) | 0.0485 (16) | |
N6 | −0.2532 (5) | 0.6289 (4) | 0.42619 (17) | 0.0494 (13) | |
H6A | −0.2931 | 0.6632 | 0.4490 | 0.059* | |
C21 | 0.3245 (5) | 0.3690 (5) | 0.32835 (19) | 0.0325 (13) | |
C22 | 0.5470 (7) | 0.2690 (6) | 0.3587 (2) | 0.064 (2) | |
H22A | 0.6363 | 0.2382 | 0.3542 | 0.077* | |
C23 | −0.3100 (6) | 0.6213 (5) | 0.3772 (2) | 0.0418 (15) | |
C24 | 0.1126 (6) | 0.7707 (6) | 0.3352 (2) | 0.0507 (17) | |
H24A | 0.0502 | 0.7146 | 0.3165 | 0.061* | |
C25 | 0.5027 (6) | 0.2609 (5) | 0.4046 (2) | 0.0508 (17) | |
H25A | 0.5622 | 0.2248 | 0.4311 | 0.061* | |
C26 | −0.0736 (6) | 0.1876 (6) | 0.4489 (2) | 0.0518 (17) | |
H26A | −0.0298 | 0.2539 | 0.4680 | 0.062* | |
C27 | −0.3606 (7) | 0.5783 (6) | 0.2782 (2) | 0.0623 (19) | |
H27A | −0.3798 | 0.5641 | 0.2445 | 0.075* | |
C28 | 0.2870 (6) | 0.8200 (6) | 0.4068 (2) | 0.0430 (15) | |
C29 | −0.2074 (7) | −0.0108 (7) | 0.4412 (3) | 0.075 (2) | |
H29A | −0.2512 | −0.0755 | 0.4565 | 0.089* | |
C30 | −0.0497 (6) | 0.2167 (6) | 0.3230 (2) | 0.0442 (15) | |
H30A | −0.0246 | 0.2533 | 0.2948 | 0.053* | |
C31 | −0.2331 (6) | 0.5352 (6) | 0.3045 (2) | 0.0522 (17) | |
H31A | −0.1664 | 0.4920 | 0.2892 | 0.063* | |
C32 | −0.1423 (7) | 0.0900 (7) | 0.4692 (3) | 0.065 (2) | |
H32A | −0.1455 | 0.0914 | 0.5028 | 0.079* | |
C33 | 0.1278 (7) | 0.8935 (7) | 0.3208 (2) | 0.064 (2) | |
H33A | 0.0743 | 0.9215 | 0.2915 | 0.077* | |
C34 | 0.3009 (6) | 0.6319 (6) | 0.4433 (2) | 0.0492 (16) | |
H34A | 0.3298 | 0.5681 | 0.4661 | 0.059* | |
C35 | 0.2207 (8) | 0.9783 (7) | 0.3484 (3) | 0.075 (2) | |
H35A | 0.2269 | 1.0612 | 0.3370 | 0.090* | |
C36 | −0.4618 (7) | 0.6430 (7) | 0.3015 (3) | 0.066 (2) | |
H36A | −0.5464 | 0.6714 | 0.2828 | 0.079* | |
C37 | 0.3030 (7) | 0.9447 (7) | 0.3917 (3) | 0.069 (2) | |
H37A | 0.3656 | 1.0016 | 0.4099 | 0.083* | |
C38 | −0.4384 (6) | 0.6650 (6) | 0.3507 (2) | 0.0562 (18) | |
H38A | −0.5055 | 0.7075 | 0.3661 | 0.067* | |
C39 | −0.2081 (7) | −0.0165 (6) | 0.3912 (3) | 0.066 (2) | |
H39A | −0.2518 | −0.0830 | 0.3722 | 0.080* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.0339 (4) | 0.0399 (4) | 0.0320 (4) | 0.0057 (4) | −0.0019 (3) | −0.0012 (4) |
O1 | 0.036 (2) | 0.052 (3) | 0.030 (2) | 0.008 (2) | −0.0010 (18) | 0.0041 (18) |
O2 | 0.049 (3) | 0.065 (3) | 0.034 (2) | 0.012 (2) | −0.001 (2) | 0.011 (2) |
O4 | 0.065 (3) | 0.090 (3) | 0.033 (2) | 0.024 (3) | 0.014 (2) | 0.018 (2) |
N1 | 0.044 (3) | 0.040 (3) | 0.032 (3) | 0.004 (2) | 0.000 (2) | 0.000 (2) |
N7 | 0.034 (3) | 0.031 (3) | 0.034 (3) | 0.003 (2) | −0.003 (2) | 0.008 (2) |
O3 | 0.035 (2) | 0.052 (3) | 0.035 (2) | 0.0104 (19) | −0.0010 (19) | 0.0037 (18) |
N3 | 0.038 (3) | 0.038 (3) | 0.042 (3) | 0.002 (2) | −0.005 (2) | −0.005 (2) |
N5 | 0.034 (3) | 0.041 (3) | 0.045 (3) | 0.006 (2) | −0.001 (2) | −0.003 (2) |
C9 | 0.029 (3) | 0.035 (3) | 0.042 (4) | 0.004 (3) | 0.001 (3) | −0.001 (3) |
C10 | 0.036 (3) | 0.043 (4) | 0.037 (3) | 0.004 (3) | 0.002 (3) | 0.001 (3) |
C11 | 0.035 (4) | 0.042 (4) | 0.034 (4) | −0.005 (3) | −0.004 (3) | 0.001 (3) |
C12 | 0.053 (4) | 0.058 (4) | 0.051 (4) | 0.017 (3) | 0.020 (3) | 0.008 (3) |
C13 | 0.034 (3) | 0.038 (4) | 0.042 (4) | 0.007 (3) | −0.003 (3) | −0.002 (3) |
N4 | 0.054 (3) | 0.049 (4) | 0.055 (4) | −0.004 (3) | −0.007 (3) | −0.012 (3) |
C15 | 0.046 (4) | 0.056 (4) | 0.036 (4) | 0.011 (3) | −0.005 (3) | −0.003 (3) |
C16 | 0.037 (4) | 0.040 (4) | 0.045 (4) | 0.010 (3) | 0.000 (3) | −0.001 (3) |
C17 | 0.046 (4) | 0.039 (4) | 0.035 (4) | 0.004 (3) | −0.003 (3) | 0.000 (3) |
N2 | 0.050 (3) | 0.052 (4) | 0.053 (4) | −0.004 (3) | −0.004 (3) | −0.018 (3) |
C19 | 0.043 (4) | 0.047 (4) | 0.053 (4) | 0.005 (3) | −0.001 (3) | −0.007 (4) |
N6 | 0.049 (3) | 0.057 (3) | 0.043 (3) | 0.018 (3) | 0.010 (3) | −0.005 (3) |
C21 | 0.031 (3) | 0.032 (3) | 0.034 (3) | 0.005 (3) | 0.005 (3) | 0.003 (3) |
C22 | 0.046 (4) | 0.089 (6) | 0.058 (5) | 0.032 (4) | 0.009 (4) | 0.014 (4) |
C23 | 0.040 (4) | 0.045 (4) | 0.041 (4) | 0.008 (3) | 0.006 (3) | 0.006 (3) |
C24 | 0.052 (4) | 0.044 (4) | 0.051 (4) | 0.005 (3) | −0.003 (3) | −0.001 (3) |
C25 | 0.048 (4) | 0.058 (4) | 0.044 (4) | 0.015 (3) | −0.001 (3) | 0.009 (3) |
C26 | 0.052 (4) | 0.050 (4) | 0.053 (4) | −0.006 (3) | 0.007 (3) | −0.005 (3) |
C27 | 0.049 (4) | 0.094 (6) | 0.041 (4) | 0.001 (4) | −0.002 (3) | 0.001 (4) |
C28 | 0.034 (3) | 0.043 (4) | 0.051 (4) | 0.005 (3) | 0.003 (3) | −0.002 (3) |
C29 | 0.062 (5) | 0.066 (6) | 0.097 (7) | −0.003 (4) | 0.015 (5) | 0.027 (5) |
C30 | 0.043 (4) | 0.049 (4) | 0.039 (4) | 0.004 (3) | 0.005 (3) | −0.002 (3) |
C31 | 0.038 (4) | 0.071 (5) | 0.047 (4) | 0.007 (3) | 0.003 (3) | −0.003 (3) |
C32 | 0.062 (5) | 0.069 (6) | 0.066 (5) | 0.007 (4) | 0.013 (4) | 0.010 (4) |
C33 | 0.066 (5) | 0.063 (5) | 0.061 (5) | 0.017 (4) | 0.001 (4) | 0.008 (4) |
C34 | 0.054 (4) | 0.039 (4) | 0.051 (4) | 0.006 (3) | −0.003 (3) | −0.004 (3) |
C35 | 0.076 (5) | 0.046 (5) | 0.100 (6) | 0.006 (4) | 0.007 (5) | 0.011 (4) |
C36 | 0.037 (4) | 0.092 (6) | 0.065 (5) | 0.011 (4) | −0.001 (4) | 0.021 (4) |
C37 | 0.068 (5) | 0.045 (5) | 0.092 (6) | −0.004 (4) | 0.005 (4) | 0.000 (4) |
C38 | 0.048 (4) | 0.068 (5) | 0.053 (4) | 0.017 (4) | 0.011 (4) | 0.017 (4) |
C39 | 0.069 (5) | 0.044 (5) | 0.085 (6) | −0.013 (4) | 0.010 (5) | −0.003 (4) |
Ni1—N7 | 2.014 (4) | N2—C30 | 1.347 (7) |
Ni1—N5 | 2.065 (4) | N2—C19 | 1.379 (7) |
Ni1—N1 | 2.109 (4) | N2—H2A | 0.8600 |
Ni1—N3 | 2.134 (4) | C19—C39 | 1.384 (8) |
Ni1—O3 | 2.135 (3) | N6—C23 | 1.375 (6) |
Ni1—O1 | 2.204 (3) | N6—H6A | 0.8600 |
O1—C11 | 1.259 (6) | C22—C25 | 1.393 (7) |
O2—C11 | 1.262 (6) | C22—H22A | 0.9300 |
O4—C17 | 1.227 (6) | C23—C38 | 1.393 (7) |
N1—C30 | 1.314 (6) | C24—C33 | 1.362 (8) |
N1—C13 | 1.398 (7) | C24—H24A | 0.9300 |
N7—C21 | 1.323 (6) | C25—H25A | 0.9300 |
N7—C9 | 1.337 (6) | C26—C32 | 1.377 (8) |
O3—C17 | 1.281 (6) | C26—H26A | 0.9300 |
N3—C34 | 1.320 (6) | C27—C31 | 1.382 (7) |
N3—C16 | 1.405 (6) | C27—C36 | 1.406 (8) |
N5—C15 | 1.317 (6) | C27—H27A | 0.9300 |
N5—C10 | 1.398 (6) | C28—C37 | 1.387 (8) |
C9—C25 | 1.370 (7) | C29—C39 | 1.377 (8) |
C9—C11 | 1.523 (7) | C29—C32 | 1.395 (9) |
C10—C23 | 1.386 (7) | C29—H29A | 0.9300 |
C10—C31 | 1.387 (7) | C30—H30A | 0.9300 |
C12—C22 | 1.383 (7) | C31—H31A | 0.9300 |
C12—C21 | 1.385 (7) | C32—H32A | 0.9300 |
C12—H12A | 0.9300 | C33—C35 | 1.391 (9) |
C13—C26 | 1.390 (7) | C33—H33A | 0.9300 |
C13—C19 | 1.397 (7) | C34—H34A | 0.9300 |
N4—C34 | 1.342 (7) | C35—C37 | 1.364 (8) |
N4—C28 | 1.397 (7) | C35—H35A | 0.9300 |
N4—H4A | 0.8600 | C36—C38 | 1.359 (7) |
C15—N6 | 1.339 (6) | C36—H36A | 0.9300 |
C15—H15A | 0.9300 | C37—H37A | 0.9300 |
C16—C24 | 1.402 (7) | C38—H38A | 0.9300 |
C16—C28 | 1.398 (7) | C39—H39A | 0.9300 |
C17—C21 | 1.524 (7) | ||
N7—Ni1—N5 | 176.78 (18) | C39—C19—C13 | 123.1 (6) |
N7—Ni1—N1 | 93.10 (17) | C15—N6—C23 | 107.3 (5) |
N5—Ni1—N1 | 89.25 (17) | C15—N6—H6A | 126.3 |
N7—Ni1—N3 | 89.93 (16) | C23—N6—H6A | 126.3 |
N5—Ni1—N3 | 87.88 (17) | N7—C21—C12 | 120.7 (5) |
N1—Ni1—N3 | 175.03 (18) | N7—C21—C17 | 114.2 (5) |
N7—Ni1—O3 | 77.57 (16) | C12—C21—C17 | 125.1 (5) |
N5—Ni1—O3 | 100.17 (16) | C12—C22—C25 | 119.0 (6) |
N1—Ni1—O3 | 91.68 (15) | C12—C22—H22A | 120.5 |
N3—Ni1—O3 | 92.82 (16) | C25—C22—H22A | 120.5 |
N7—Ni1—O1 | 76.15 (16) | N6—C23—C10 | 105.9 (5) |
N5—Ni1—O1 | 106.06 (16) | N6—C23—C38 | 132.1 (6) |
N1—Ni1—O1 | 90.31 (15) | C10—C23—C38 | 122.0 (5) |
N3—Ni1—O1 | 86.59 (16) | C33—C24—C16 | 117.0 (6) |
O3—Ni1—O1 | 153.72 (14) | C33—C24—H24A | 121.5 |
C11—O1—Ni1 | 114.6 (3) | C16—C24—H24A | 121.5 |
C30—N1—C13 | 104.9 (5) | C9—C25—C22 | 119.4 (5) |
C30—N1—Ni1 | 124.8 (4) | C9—C25—H25A | 120.3 |
C13—N1—Ni1 | 130.3 (4) | C22—C25—H25A | 120.3 |
C21—N7—C9 | 121.9 (5) | C32—C26—C13 | 117.2 (6) |
C21—N7—Ni1 | 118.1 (3) | C32—C26—H26A | 121.4 |
C9—N7—Ni1 | 119.9 (4) | C13—C26—H26A | 121.4 |
C17—O3—Ni1 | 115.4 (3) | C31—C27—C36 | 121.2 (6) |
C34—N3—C16 | 104.4 (5) | C31—C27—H27A | 119.4 |
C34—N3—Ni1 | 125.8 (4) | C36—C27—H27A | 119.4 |
C16—N3—Ni1 | 129.7 (4) | C37—C28—C16 | 123.1 (6) |
C15—N5—C10 | 105.0 (4) | C37—C28—N4 | 132.2 (6) |
C15—N5—Ni1 | 125.5 (4) | C16—C28—N4 | 104.7 (5) |
C10—N5—Ni1 | 129.4 (4) | C39—C29—C32 | 121.3 (7) |
N7—C9—C25 | 120.2 (5) | C39—C29—H29A | 119.4 |
N7—C9—C11 | 113.1 (5) | C32—C29—H29A | 119.4 |
C25—C9—C11 | 126.6 (5) | N1—C30—N2 | 113.5 (5) |
C23—C10—C31 | 120.5 (5) | N1—C30—H30A | 123.3 |
C23—C10—N5 | 108.9 (5) | N2—C30—H30A | 123.3 |
C31—C10—N5 | 130.6 (5) | C27—C31—C10 | 117.5 (6) |
O2—C11—O1 | 125.9 (5) | C27—C31—H31A | 121.2 |
O2—C11—C9 | 118.0 (5) | C10—C31—H31A | 121.2 |
O1—C11—C9 | 116.2 (5) | C26—C32—C29 | 122.3 (7) |
C22—C12—C21 | 118.8 (6) | C26—C32—H32A | 118.9 |
C22—C12—H12A | 120.6 | C29—C32—H32A | 118.9 |
C21—C12—H12A | 120.6 | C24—C33—C35 | 122.1 (6) |
C26—C13—C19 | 119.8 (6) | C24—C33—H33A | 118.9 |
C26—C13—N1 | 131.2 (5) | C35—C33—H33A | 118.9 |
C19—C13—N1 | 109.0 (5) | N3—C34—N4 | 113.6 (5) |
C34—N4—C28 | 107.5 (5) | N3—C34—H34A | 123.2 |
C34—N4—H4A | 126.3 | N4—C34—H34A | 123.2 |
C28—N4—H4A | 126.3 | C37—C35—C33 | 122.6 (7) |
N5—C15—N6 | 113.0 (5) | C37—C35—H35A | 118.7 |
N5—C15—H15A | 123.5 | C33—C35—H35A | 118.7 |
N6—C15—H15A | 123.5 | C38—C36—C27 | 121.3 (6) |
C24—C16—C28 | 119.6 (6) | C38—C36—H36A | 119.4 |
C24—C16—N3 | 130.6 (5) | C27—C36—H36A | 119.4 |
C28—C16—N3 | 109.8 (5) | C35—C37—C28 | 115.5 (6) |
O4—C17—O3 | 127.1 (5) | C35—C37—H37A | 122.2 |
O4—C17—C21 | 118.3 (5) | C28—C37—H37A | 122.2 |
O3—C17—C21 | 114.6 (5) | C36—C38—C23 | 117.4 (6) |
C30—N2—C19 | 106.9 (5) | C36—C38—H38A | 121.3 |
C30—N2—H2A | 126.5 | C23—C38—H38A | 121.3 |
C19—N2—H2A | 126.5 | C29—C39—C19 | 116.3 (6) |
N2—C19—C39 | 131.1 (6) | C29—C39—H39A | 121.9 |
N2—C19—C13 | 105.7 (5) | C19—C39—H39A | 121.9 |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O4i | 0.86 | 1.83 | 2.683 (6) | 169 |
N4—H4A···O2ii | 0.86 | 2.07 | 2.775 (6) | 139 |
N6—H6A···O2iii | 0.86 | 2.00 | 2.856 (6) | 177 |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) −x+1, −y+1, −z+1; (iii) −x, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Ni(C7H3NO4)(C7H6N2)3] |
Mr | 578.21 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 9.4546 (19), 10.487 (2), 27.532 (5) |
β (°) | 98.94 (3) |
V (Å3) | 2696.7 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.77 |
Crystal size (mm) | 0.10 × 0.10 × 0.10 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.934, 0.934 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 21674, 4752, 2842 |
Rint | 0.153 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.086, 0.143, 1.12 |
No. of reflections | 4752 |
No. of parameters | 361 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.33, −0.32 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O4i | 0.86 | 1.83 | 2.683 (6) | 169 |
N4—H4A···O2ii | 0.86 | 2.07 | 2.775 (6) | 139 |
N6—H6A···O2iii | 0.86 | 2.00 | 2.856 (6) | 177 |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) −x+1, −y+1, −z+1; (iii) −x, −y+1, −z+1. |
References
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Liu, T. F., Wu, W. F., Wan, C. Q., He, C. H., Jiao, C. H. & Cui, G. H. (2011). J. Coord. Chem. pp. 975–986. Web of Science CSD CrossRef Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Dipicolinic acid (pyridine–2,6–dicarboxylic acid) has important biological functions in organisms and commonly coordinates to transition metals by either carboxylate bridges between metal centers, to form polymeric or dimeric complexes or tridentate (O, N, O') chelation to one metal ion. Some Ni(II) dipicolinate complexes with imidazoles have been reported (Liu et al. 2011). Here, we report here the crystal structure of the title compound.
The molecular structure of the title compound is illustrated in Fig. 1. Bond lengths and angles common to related structures are in the normal range (Liu et al. 2011). The NiII ion is coordinated by two carboxylate oxygen atoms and one N atom from a pyridine-2,6-dicarboxylato ligand and three N atoms from three benzimidazole ligands to form a slightly distorted octahedral geometry. In the crystal, molecules are linked by N—H···O hydrogen bonds to form a three-dimensional network.