organic compounds
Ethyl 2-(4-bromophenyl)-1-phenyl-1H-benzimidazole-5-carboxylate
aInstitute for Research in Molecular Medicine, Universiti Sains Malaysia, Minden 11800, Penang, Malaysia, and bSchool of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: arazaki@usm.my
In the title compound, C22H17BrN2O2, the benzimidazole ring system is essentially planar, with a maximum deviation of 0.017 (1) Å, and forms dihedral angles of 27.79 (6) and 64.43 (6)° with the phenyl and bromo-substituted benzene rings, respectively. In the crystal, molecules are linked into one-dimensional chains along the a axis by weak C—H⋯O hydrogen bonds. Weak intermolecular C—H⋯π interactions are also present.
Related literature
For background to and the biological activities of benzimidazoles, see: Townsend & Revankar (1970); Rao et al. (2002); Thakurdesai et al. (2007); Dubey & Sanyal (2010); Lacey (1990). For a related structure, see: Arumugam et al. (2010). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536812019897/lh5466sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812019897/lh5466Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812019897/lh5466Isup3.cml
Ethyl 3-amino-4-(phenyl amino) benzoate (0.84 mmol) and sodium metabisulfite adduct of bromo benzaldehyde (1.68 mmol) were dissolved in DMF. The reaction mixture was reflux at 403K for 2 h. After completion, the reaction mixture was diluted in ethyl acetate (20 ml) and washed with water (20 ml). The organic layer was collected, dried over Na2SO4 and the evaporated in vacuo to yield the product. The product was recrystallized from ethyl acetate.
All H atoms were positioned geometrically [C–H = 0.95–0.99 Å] and refined using a riding model with Uiso(H) = 1.2 and 1.5 Ueq(C). A rotating group model was applied to the methyl group.
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C22H17BrN2O2 | Z = 2 |
Mr = 421.29 | F(000) = 428 |
Triclinic, P1 | Dx = 1.528 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.3121 (2) Å | Cell parameters from 9874 reflections |
b = 9.8136 (2) Å | θ = 2.4–32.7° |
c = 11.8458 (2) Å | µ = 2.27 mm−1 |
α = 108.217 (1)° | T = 100 K |
β = 101.135 (1)° | Block, colourless |
γ = 109.361 (1)° | 0.42 × 0.33 × 0.15 mm |
V = 915.39 (3) Å3 |
Bruker SMART APEXII CCD area-detector diffractometer | 5326 independent reflections |
Radiation source: fine-focus sealed tube | 4846 reflections with I > I > 2σ(I) |
Graphite monochromator | Rint = 0.025 |
ϕ and ω scans | θmax = 30.0°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −13→13 |
Tmin = 0.450, Tmax = 0.728 | k = −13→13 |
21718 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.071 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0366P)2 + 0.3723P] where P = (Fo2 + 2Fc2)/3 |
5326 reflections | (Δ/σ)max = 0.001 |
245 parameters | Δρmax = 0.53 e Å−3 |
0 restraints | Δρmin = −0.65 e Å−3 |
C22H17BrN2O2 | γ = 109.361 (1)° |
Mr = 421.29 | V = 915.39 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.3121 (2) Å | Mo Kα radiation |
b = 9.8136 (2) Å | µ = 2.27 mm−1 |
c = 11.8458 (2) Å | T = 100 K |
α = 108.217 (1)° | 0.42 × 0.33 × 0.15 mm |
β = 101.135 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 5326 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 4846 reflections with I > I > 2σ(I) |
Tmin = 0.450, Tmax = 0.728 | Rint = 0.025 |
21718 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | 0 restraints |
wR(F2) = 0.071 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.53 e Å−3 |
5326 reflections | Δρmin = −0.65 e Å−3 |
245 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | −0.680059 (17) | −0.321236 (17) | −0.071893 (14) | 0.02360 (5) | |
O1 | 0.66395 (12) | −0.10601 (12) | 0.40079 (10) | 0.0201 (2) | |
O2 | 0.84619 (13) | 0.14498 (13) | 0.46778 (10) | 0.0230 (2) | |
N1 | 0.12223 (14) | −0.10878 (14) | 0.20976 (11) | 0.0180 (2) | |
N2 | 0.16438 (14) | 0.14058 (14) | 0.23396 (11) | 0.0163 (2) | |
C1 | 0.31426 (17) | 0.14481 (16) | 0.28300 (13) | 0.0167 (2) | |
C2 | 0.46861 (18) | 0.26876 (17) | 0.34068 (14) | 0.0202 (3) | |
H2A | 0.4867 | 0.3736 | 0.3505 | 0.024* | |
C3 | 0.59380 (18) | 0.23123 (17) | 0.38280 (14) | 0.0205 (3) | |
H3A | 0.7005 | 0.3123 | 0.4226 | 0.025* | |
C4 | 0.56651 (17) | 0.07511 (17) | 0.36785 (13) | 0.0181 (3) | |
C5 | 0.41259 (17) | −0.04732 (17) | 0.30997 (13) | 0.0184 (3) | |
H5A | 0.3946 | −0.1522 | 0.2997 | 0.022* | |
C6 | 0.28543 (17) | −0.01088 (16) | 0.26745 (13) | 0.0168 (2) | |
C7 | 0.05354 (17) | −0.01604 (16) | 0.19171 (12) | 0.0160 (2) | |
C8 | −0.12145 (16) | −0.07748 (16) | 0.13144 (12) | 0.0164 (2) | |
C9 | −0.21833 (17) | −0.21394 (17) | 0.14191 (13) | 0.0182 (3) | |
H9A | −0.1695 | −0.2591 | 0.1889 | 0.022* | |
C10 | −0.38444 (17) | −0.28386 (17) | 0.08468 (13) | 0.0192 (3) | |
H10A | −0.4497 | −0.3741 | 0.0945 | 0.023* | |
C11 | −0.45403 (17) | −0.21985 (17) | 0.01266 (13) | 0.0183 (3) | |
C12 | −0.36095 (17) | −0.08657 (17) | −0.00143 (13) | 0.0183 (3) | |
H12A | −0.4102 | −0.0453 | −0.0520 | 0.022* | |
C13 | −0.19447 (17) | −0.01399 (16) | 0.05949 (13) | 0.0172 (2) | |
H13A | −0.1303 | 0.0788 | 0.0522 | 0.021* | |
C14 | 0.13582 (17) | 0.27765 (16) | 0.24107 (13) | 0.0168 (2) | |
C15 | 0.04564 (17) | 0.32281 (17) | 0.31392 (13) | 0.0187 (3) | |
H15A | 0.0000 | 0.2619 | 0.3569 | 0.022* | |
C16 | 0.02336 (18) | 0.45862 (18) | 0.32284 (14) | 0.0220 (3) | |
H16A | −0.0369 | 0.4914 | 0.3732 | 0.026* | |
C17 | 0.08845 (19) | 0.54698 (18) | 0.25870 (15) | 0.0236 (3) | |
H17A | 0.0729 | 0.6397 | 0.2654 | 0.028* | |
C18 | 0.1760 (2) | 0.49909 (18) | 0.18500 (15) | 0.0250 (3) | |
H18A | 0.2188 | 0.5582 | 0.1400 | 0.030* | |
C19 | 0.20176 (19) | 0.36444 (17) | 0.17651 (14) | 0.0208 (3) | |
H19A | 0.2635 | 0.3326 | 0.1273 | 0.025* | |
C20 | 0.70792 (17) | 0.04581 (17) | 0.41792 (13) | 0.0183 (3) | |
C21 | 0.79333 (17) | −0.14750 (17) | 0.44476 (13) | 0.0199 (3) | |
H21A | 0.8430 | −0.0922 | 0.5375 | 0.024* | |
H21B | 0.8778 | −0.1179 | 0.4063 | 0.024* | |
C22 | 0.7174 (2) | −0.32313 (19) | 0.40531 (15) | 0.0264 (3) | |
H22A | 0.8004 | −0.3580 | 0.4316 | 0.040* | |
H22B | 0.6670 | −0.3758 | 0.3135 | 0.040* | |
H22C | 0.6353 | −0.3502 | 0.4451 | 0.040* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.01607 (8) | 0.02227 (8) | 0.02755 (8) | 0.00650 (6) | 0.00244 (6) | 0.00860 (6) |
O1 | 0.0153 (5) | 0.0192 (5) | 0.0243 (5) | 0.0073 (4) | 0.0042 (4) | 0.0083 (4) |
O2 | 0.0168 (5) | 0.0232 (5) | 0.0259 (5) | 0.0062 (4) | 0.0054 (4) | 0.0095 (4) |
N1 | 0.0162 (5) | 0.0167 (5) | 0.0189 (5) | 0.0060 (4) | 0.0031 (4) | 0.0071 (5) |
N2 | 0.0162 (5) | 0.0144 (5) | 0.0182 (5) | 0.0060 (4) | 0.0053 (4) | 0.0071 (4) |
C1 | 0.0171 (6) | 0.0170 (6) | 0.0176 (6) | 0.0076 (5) | 0.0063 (5) | 0.0082 (5) |
C2 | 0.0196 (7) | 0.0163 (6) | 0.0232 (7) | 0.0057 (5) | 0.0067 (5) | 0.0083 (5) |
C3 | 0.0167 (6) | 0.0182 (6) | 0.0235 (7) | 0.0042 (5) | 0.0061 (5) | 0.0082 (5) |
C4 | 0.0167 (6) | 0.0190 (6) | 0.0182 (6) | 0.0073 (5) | 0.0059 (5) | 0.0075 (5) |
C5 | 0.0183 (6) | 0.0171 (6) | 0.0193 (6) | 0.0071 (5) | 0.0059 (5) | 0.0073 (5) |
C6 | 0.0166 (6) | 0.0155 (6) | 0.0160 (6) | 0.0052 (5) | 0.0042 (5) | 0.0060 (5) |
C7 | 0.0173 (6) | 0.0148 (6) | 0.0147 (6) | 0.0057 (5) | 0.0047 (5) | 0.0061 (5) |
C8 | 0.0158 (6) | 0.0168 (6) | 0.0141 (6) | 0.0063 (5) | 0.0039 (5) | 0.0046 (5) |
C9 | 0.0195 (6) | 0.0185 (6) | 0.0158 (6) | 0.0077 (5) | 0.0044 (5) | 0.0071 (5) |
C10 | 0.0191 (6) | 0.0179 (6) | 0.0175 (6) | 0.0053 (5) | 0.0052 (5) | 0.0063 (5) |
C11 | 0.0164 (6) | 0.0193 (6) | 0.0170 (6) | 0.0077 (5) | 0.0049 (5) | 0.0049 (5) |
C12 | 0.0207 (7) | 0.0188 (6) | 0.0166 (6) | 0.0111 (5) | 0.0053 (5) | 0.0062 (5) |
C13 | 0.0188 (6) | 0.0164 (6) | 0.0166 (6) | 0.0077 (5) | 0.0064 (5) | 0.0064 (5) |
C14 | 0.0171 (6) | 0.0151 (6) | 0.0163 (6) | 0.0061 (5) | 0.0035 (5) | 0.0058 (5) |
C15 | 0.0176 (6) | 0.0197 (6) | 0.0184 (6) | 0.0075 (5) | 0.0055 (5) | 0.0079 (5) |
C16 | 0.0202 (7) | 0.0218 (7) | 0.0230 (7) | 0.0107 (6) | 0.0062 (5) | 0.0064 (6) |
C17 | 0.0234 (7) | 0.0170 (6) | 0.0267 (7) | 0.0084 (6) | 0.0027 (6) | 0.0076 (6) |
C18 | 0.0322 (8) | 0.0193 (7) | 0.0236 (7) | 0.0087 (6) | 0.0086 (6) | 0.0117 (6) |
C19 | 0.0262 (7) | 0.0179 (6) | 0.0190 (6) | 0.0087 (6) | 0.0100 (6) | 0.0075 (5) |
C20 | 0.0183 (6) | 0.0200 (6) | 0.0172 (6) | 0.0080 (5) | 0.0074 (5) | 0.0076 (5) |
C21 | 0.0178 (6) | 0.0230 (7) | 0.0187 (6) | 0.0105 (6) | 0.0043 (5) | 0.0075 (5) |
C22 | 0.0304 (8) | 0.0243 (7) | 0.0254 (7) | 0.0135 (6) | 0.0076 (6) | 0.0100 (6) |
Br1—C11 | 1.8967 (14) | C10—C11 | 1.391 (2) |
O1—C20 | 1.3428 (17) | C10—H10A | 0.9500 |
O1—C21 | 1.4506 (17) | C11—C12 | 1.390 (2) |
O2—C20 | 1.2124 (18) | C12—C13 | 1.3949 (19) |
N1—C7 | 1.3182 (17) | C12—H12A | 0.9500 |
N1—C6 | 1.3856 (18) | C13—H13A | 0.9500 |
N2—C1 | 1.3858 (17) | C14—C19 | 1.3889 (19) |
N2—C7 | 1.3950 (17) | C14—C15 | 1.3906 (19) |
N2—C14 | 1.4360 (17) | C15—C16 | 1.391 (2) |
C1—C2 | 1.398 (2) | C15—H15A | 0.9500 |
C1—C6 | 1.4047 (19) | C16—C17 | 1.392 (2) |
C2—C3 | 1.385 (2) | C16—H16A | 0.9500 |
C2—H2A | 0.9500 | C17—C18 | 1.386 (2) |
C3—C4 | 1.414 (2) | C17—H17A | 0.9500 |
C3—H3A | 0.9500 | C18—C19 | 1.396 (2) |
C4—C5 | 1.3898 (19) | C18—H18A | 0.9500 |
C4—C20 | 1.4915 (19) | C19—H19A | 0.9500 |
C5—C6 | 1.3953 (19) | C21—C22 | 1.500 (2) |
C5—H5A | 0.9500 | C21—H21A | 0.9900 |
C7—C8 | 1.4692 (19) | C21—H21B | 0.9900 |
C8—C13 | 1.4022 (19) | C22—H22A | 0.9800 |
C8—C9 | 1.4031 (19) | C22—H22B | 0.9800 |
C9—C10 | 1.387 (2) | C22—H22C | 0.9800 |
C9—H9A | 0.9500 | ||
C20—O1—C21 | 115.96 (11) | C11—C12—H12A | 120.3 |
C7—N1—C6 | 105.29 (11) | C13—C12—H12A | 120.3 |
C1—N2—C7 | 106.01 (11) | C12—C13—C8 | 120.27 (13) |
C1—N2—C14 | 124.37 (11) | C12—C13—H13A | 119.9 |
C7—N2—C14 | 129.28 (12) | C8—C13—H13A | 119.9 |
N2—C1—C2 | 131.97 (13) | C19—C14—C15 | 121.23 (13) |
N2—C1—C6 | 105.65 (12) | C19—C14—N2 | 119.07 (12) |
C2—C1—C6 | 122.36 (13) | C15—C14—N2 | 119.69 (12) |
C3—C2—C1 | 116.72 (13) | C14—C15—C16 | 118.92 (13) |
C3—C2—H2A | 121.6 | C14—C15—H15A | 120.5 |
C1—C2—H2A | 121.6 | C16—C15—H15A | 120.5 |
C2—C3—C4 | 121.52 (13) | C15—C16—C17 | 120.63 (14) |
C2—C3—H3A | 119.2 | C15—C16—H16A | 119.7 |
C4—C3—H3A | 119.2 | C17—C16—H16A | 119.7 |
C5—C4—C3 | 121.27 (13) | C18—C17—C16 | 119.74 (14) |
C5—C4—C20 | 120.79 (13) | C18—C17—H17A | 120.1 |
C3—C4—C20 | 117.94 (13) | C16—C17—H17A | 120.1 |
C4—C5—C6 | 117.74 (13) | C17—C18—C19 | 120.41 (14) |
C4—C5—H5A | 121.1 | C17—C18—H18A | 119.8 |
C6—C5—H5A | 121.1 | C19—C18—H18A | 119.8 |
N1—C6—C5 | 129.29 (13) | C14—C19—C18 | 119.06 (13) |
N1—C6—C1 | 110.30 (12) | C14—C19—H19A | 120.5 |
C5—C6—C1 | 120.40 (13) | C18—C19—H19A | 120.5 |
N1—C7—N2 | 112.74 (12) | O2—C20—O1 | 123.35 (13) |
N1—C7—C8 | 121.69 (12) | O2—C20—C4 | 125.07 (13) |
N2—C7—C8 | 125.56 (12) | O1—C20—C4 | 111.58 (12) |
C13—C8—C9 | 119.05 (13) | O1—C21—C22 | 106.03 (12) |
C13—C8—C7 | 124.21 (12) | O1—C21—H21A | 110.5 |
C9—C8—C7 | 116.64 (12) | C22—C21—H21A | 110.5 |
C10—C9—C8 | 120.93 (13) | O1—C21—H21B | 110.5 |
C10—C9—H9A | 119.5 | C22—C21—H21B | 110.5 |
C8—C9—H9A | 119.5 | H21A—C21—H21B | 108.7 |
C9—C10—C11 | 119.00 (13) | C21—C22—H22A | 109.5 |
C9—C10—H10A | 120.5 | C21—C22—H22B | 109.5 |
C11—C10—H10A | 120.5 | H22A—C22—H22B | 109.5 |
C12—C11—C10 | 121.39 (13) | C21—C22—H22C | 109.5 |
C12—C11—Br1 | 119.62 (11) | H22A—C22—H22C | 109.5 |
C10—C11—Br1 | 118.97 (11) | H22B—C22—H22C | 109.5 |
C11—C12—C13 | 119.32 (13) | ||
C7—N2—C1—C2 | −178.43 (15) | C13—C8—C9—C10 | −1.5 (2) |
C14—N2—C1—C2 | −4.5 (2) | C7—C8—C9—C10 | −177.86 (12) |
C7—N2—C1—C6 | 0.05 (14) | C8—C9—C10—C11 | 2.2 (2) |
C14—N2—C1—C6 | 173.96 (12) | C9—C10—C11—C12 | −0.9 (2) |
N2—C1—C2—C3 | 178.10 (14) | C9—C10—C11—Br1 | 177.12 (10) |
C6—C1—C2—C3 | −0.2 (2) | C10—C11—C12—C13 | −1.0 (2) |
C1—C2—C3—C4 | 0.1 (2) | Br1—C11—C12—C13 | −179.04 (10) |
C2—C3—C4—C5 | 0.1 (2) | C11—C12—C13—C8 | 1.7 (2) |
C2—C3—C4—C20 | −179.00 (13) | C9—C8—C13—C12 | −0.5 (2) |
C3—C4—C5—C6 | −0.3 (2) | C7—C8—C13—C12 | 175.61 (13) |
C20—C4—C5—C6 | 178.81 (12) | C1—N2—C14—C19 | 65.95 (18) |
C7—N1—C6—C5 | 178.30 (14) | C7—N2—C14—C19 | −121.62 (16) |
C7—N1—C6—C1 | −0.54 (15) | C1—N2—C14—C15 | −112.87 (15) |
C4—C5—C6—N1 | −178.52 (13) | C7—N2—C14—C15 | 59.56 (19) |
C4—C5—C6—C1 | 0.2 (2) | C19—C14—C15—C16 | −0.8 (2) |
N2—C1—C6—N1 | 0.30 (15) | N2—C14—C15—C16 | 178.04 (13) |
C2—C1—C6—N1 | 178.95 (13) | C14—C15—C16—C17 | 0.8 (2) |
N2—C1—C6—C5 | −178.66 (12) | C15—C16—C17—C18 | 0.1 (2) |
C2—C1—C6—C5 | 0.0 (2) | C16—C17—C18—C19 | −1.1 (2) |
C6—N1—C7—N2 | 0.58 (15) | C15—C14—C19—C18 | −0.2 (2) |
C6—N1—C7—C8 | 179.77 (12) | N2—C14—C19—C18 | −179.03 (13) |
C1—N2—C7—N1 | −0.40 (15) | C17—C18—C19—C14 | 1.2 (2) |
C14—N2—C7—N1 | −173.91 (13) | C21—O1—C20—O2 | −0.62 (19) |
C1—N2—C7—C8 | −179.56 (12) | C21—O1—C20—C4 | 179.17 (11) |
C14—N2—C7—C8 | 6.9 (2) | C5—C4—C20—O2 | 178.78 (14) |
N1—C7—C8—C13 | −149.98 (14) | C3—C4—C20—O2 | −2.1 (2) |
N2—C7—C8—C13 | 29.1 (2) | C5—C4—C20—O1 | −1.01 (18) |
N1—C7—C8—C9 | 26.20 (19) | C3—C4—C20—O1 | 178.09 (12) |
N2—C7—C8—C9 | −154.71 (13) | C20—O1—C21—C22 | −175.08 (12) |
Cg1 and Cg2 are the centroids of the N1/N1/C1/C6/C7 and C8–C13 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H15A···O2i | 0.95 | 2.38 | 3.311 (2) | 166 |
C19—H19A···Cg2ii | 0.95 | 2.59 | 3.4534 (18) | 152 |
C21—H21A···Cg1iii | 0.99 | 2.64 | 3.5288 (15) | 149 |
Symmetry codes: (i) x−1, y, z; (ii) −x, −y, −z; (iii) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C22H17BrN2O2 |
Mr | 421.29 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 9.3121 (2), 9.8136 (2), 11.8458 (2) |
α, β, γ (°) | 108.217 (1), 101.135 (1), 109.361 (1) |
V (Å3) | 915.39 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 2.27 |
Crystal size (mm) | 0.42 × 0.33 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.450, 0.728 |
No. of measured, independent and observed [I > I > 2σ(I)] reflections | 21718, 5326, 4846 |
Rint | 0.025 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.027, 0.071, 1.06 |
No. of reflections | 5326 |
No. of parameters | 245 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.53, −0.65 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg1 and Cg2 are the centroids of the N1/N1/C1/C6/C7 and C8–C13 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H15A···O2i | 0.95 | 2.38 | 3.311 (2) | 166 |
C19—H19A···Cg2ii | 0.95 | 2.59 | 3.4534 (18) | 152 |
C21—H21A···Cg1iii | 0.99 | 2.64 | 3.5288 (15) | 149 |
Symmetry codes: (i) x−1, y, z; (ii) −x, −y, −z; (iii) −x+1, −y, −z+1. |
Footnotes
‡Thomson Reuters ResearcherID: A-5599-2009.
Acknowledgements
The authors thank the Malaysian Government and Universiti Sains Malaysia for the Research University grants Nos. 1001/PFIZIK/811151 and 1001/PSK/8620012. The authors also thank Pharmacogenetic and Novel Therapeutic Research, Institute for Research in Molecular Medicine, Universiti Sains Malaysia.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Benzimidazoles are a class of bioactive heterocyclic compounds which exhibit a wide range of activities such as anti-cancer (Townsend & Revankar, 1970), anti-HIV (Rao et al., 2002), anti-inflammatory (Thakurdesai et al., 2007) and anthelmintics (Dubey & Sanyal, 2010). The primary mechanism of action of benzimidazoles as anthelmintics is by binding to free β-tubulin and inhibiting its polymerization (Lacey, 1990). A number of benzimidazoles have been shown to also inhibit mammalian tubulin polymerization and to be aneugenic in vivo.
The molecular structure is shown in Fig. 1. Bond lengths and angles are within normal ranges and are comparable to a related structure (Arumugam et al.,2010). The benzimidazole ring system (N1/N2/C1—C7) is essentially planar with a maximum deviation of 0.017 (1) Å for atom C7. The dihedral angles of the benzimidazole ring (N1/N2/C1—C7) with the phenyl ring (C14–C19) and the bromo-substituted benzene ring (C8–C13) are 27.79 (6) and 64.43 (6)°, respectively.
In the crystal packing (Fig. 2), intermolecular C15—H15A···O2i (Table 1) hydrogen bonds link the molecules into one-dimensional zigzag chains along the a-axis. In addition, the crystal structure is further stabilized by the intermolecular C21—H21A···Cg1iii and C19—H19A···Cg2ii (Table 1) interactions (Cg1 and Cg2 are the centroids of N1/N1/C1/C6/C7 and C8–C13 rings, respectively).