organic compounds
Cyclopropylammonium 4-iodobenzoate
aCentre for Supramolecular Chemistry Research, Department of Chemistry, University of Cape Town, Rondebosch 7701, South Africa
*Correspondence e-mail: andreas.lemmerer@wits.ac.za
In the title molecular salt, C3H8N+·C7H4IO2−, the cyclopropanaminium cation forms three hydrogen bonds to the 4-iodobenzoate anion, forming two unique repeating R44(12) hydrogen-bonding rings that result in one-dimensional hydrogen-bonded columns along the crystallographic c axis.
Related literature
For proton-transfer compounds, see: Kinbara et al. (1996). For hydrogen bonds between primary ammonium cations and a carboxylate anion, see: Lemmerer (2011). For hydrogen-bond motifs, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT-Plus (Bruker, 2004); data reduction: SAINT-Plus and XPREP (Bruker 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and DIAMOND (Brandenburg, 1999); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S160053681202449X/bt5937sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S160053681202449X/bt5937Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S160053681202449X/bt5937Isup3.mol
Supporting information file. DOI: https://doi.org/10.1107/S160053681202449X/bt5937Isup4.cml
All chemicals were purchased from commercial sources and used as received. (I) was prepared by slowly evaporating a solution of cyclopropylamine (0.050 g, 0.88 mmol) and p-iodobenzoic acid (0.217 g, 0.886 mmol) dissolved in 5 ml methanol.
All C—H atoms were refined using a riding model, with a distance of 0.95 Å (Ar—H), 0.99 Å, (CH2) and 1.00 Å, (CH) and Uiso(H) = 1.2Ueq(C). N—H atoms on the ammonium group were located in the difference Fourier map and their coordinates and isotropic displacement parameters were refined freely.
Ammonium carboxylate salts are molecular salts formed by mixing a primary amine and a carboxylic acid containing molecule, thus resulting in proton transfer from the acid to the amine (Kinbara et al., 1996). This forms a primary ammonium cation and a carboxylate anion. The three H atoms on the cation can then form three charge-assisted hydrogen bonds to the two O atoms on the anion. In the literature, three kinds of hydrogen bonded rings are most commonly formed by these hydrogen bonds, described using graph-set notation (Bernstein et al., 1995): R24(8), R34(10) and R44(12) (Lemmerer, 2011).
In molecular salt (I), shown in Fig. 1, formed by dissolving cyclopropylamine and p-iodobenzoic acid in methanol, only a R44(12) ring is formed. However, two such rings are formed, one by using the N1—H1A···O1 and N1—H1B···O1 hydrogen bonds, and the second one by using the N1—H1B···O1 and N1—H1C···O2 hydrogen bonds. As the N1—H1B···O1 hydrogen bond is common to both rings, a repetition of the two types of rings results, forming a 1-D hydrogen bonded column along the c axis (Fig. 2).
For proton-transfer compounds, see: Kinbara et al. (1996). For hydrogen bonds between primary ammonium cations and a carboxylate anion, see: Lemmerer (2011). For hydrogen-bond motifs, see: Bernstein et al. (1995).
Data collection: APEX2 (Bruker, 2005); cell
SAINT-Plus (Bruker, 2004); data reduction: SAINT-Plus and XPREP (Bruker 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and DIAMOND (Brandenburg, 1999); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).C3H8N+·C7H4IO2− | F(000) = 1184 |
Mr = 305.11 | Dx = 1.804 Mg m−3 |
Orthorhombic, Pbcn | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2n 2ab | Cell parameters from 4806 reflections |
a = 30.7877 (6) Å | θ = 2.7–28.1° |
b = 9.7608 (2) Å | µ = 2.83 mm−1 |
c = 7.4757 (2) Å | T = 173 K |
V = 2246.54 (9) Å3 | Needle, colourless |
Z = 8 | 0.5 × 0.15 × 0.11 mm |
Bruker APEXII CCD area-detector diffractometer | 2103 reflections with I > 2σ(I) |
ω scans | Rint = 0.037 |
Absorption correction: integration (XPREP; Bruker, 2004) | θmax = 28°, θmin = 2.2° |
Tmin = 0.332, Tmax = 0.746 | h = −37→40 |
11693 measured reflections | k = −12→11 |
2705 independent reflections | l = −9→9 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.023 | w = 1/[σ2(Fo2) + (0.0206P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.047 | (Δ/σ)max = 0.001 |
S = 0.97 | Δρmax = 0.42 e Å−3 |
2705 reflections | Δρmin = −0.79 e Å−3 |
139 parameters |
C3H8N+·C7H4IO2− | V = 2246.54 (9) Å3 |
Mr = 305.11 | Z = 8 |
Orthorhombic, Pbcn | Mo Kα radiation |
a = 30.7877 (6) Å | µ = 2.83 mm−1 |
b = 9.7608 (2) Å | T = 173 K |
c = 7.4757 (2) Å | 0.5 × 0.15 × 0.11 mm |
Bruker APEXII CCD area-detector diffractometer | 2705 independent reflections |
Absorption correction: integration (XPREP; Bruker, 2004) | 2103 reflections with I > 2σ(I) |
Tmin = 0.332, Tmax = 0.746 | Rint = 0.037 |
11693 measured reflections |
R[F2 > 2σ(F2)] = 0.023 | 0 restraints |
wR(F2) = 0.047 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.97 | Δρmax = 0.42 e Å−3 |
2705 reflections | Δρmin = −0.79 e Å−3 |
139 parameters |
Experimental. Numerical integration absorption corrections based on indexed crystal faces were applied using the XPREP routine (Bruker, 2004) |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.12089 (7) | 0.65046 (19) | 0.5124 (3) | 0.0213 (4) | |
C2 | 0.14737 (7) | 0.5436 (2) | 0.4583 (3) | 0.0247 (5) | |
H2 | 0.1355 | 0.4708 | 0.3895 | 0.03* | |
C3 | 0.19096 (7) | 0.5418 (2) | 0.5035 (3) | 0.0268 (5) | |
H3 | 0.2089 | 0.4674 | 0.4683 | 0.032* | |
C4 | 0.20809 (7) | 0.6497 (2) | 0.6003 (3) | 0.0225 (4) | |
C5 | 0.18231 (7) | 0.7577 (2) | 0.6552 (3) | 0.0262 (5) | |
H5 | 0.1944 | 0.8312 | 0.7221 | 0.031* | |
C6 | 0.13877 (7) | 0.7572 (2) | 0.6114 (3) | 0.0241 (5) | |
H6 | 0.1208 | 0.8306 | 0.6493 | 0.029* | |
C7 | 0.07329 (7) | 0.6516 (2) | 0.4662 (3) | 0.0235 (5) | |
O1 | 0.06027 (5) | 0.56982 (14) | 0.34560 (18) | 0.0263 (3) | |
O2 | 0.04919 (5) | 0.73454 (15) | 0.5467 (2) | 0.0332 (4) | |
I1 | 0.274626 (5) | 0.652799 (16) | 0.66287 (2) | 0.03283 (6) | |
C8 | 0.05737 (7) | 0.8095 (2) | −0.0226 (3) | 0.0257 (5) | |
H8 | 0.0536 | 0.8472 | −0.146 | 0.031* | |
C9 | 0.05800 (8) | 0.9120 (2) | 0.1242 (3) | 0.0353 (6) | |
H9A | 0.0452 | 0.8852 | 0.2405 | 0.042* | |
H9B | 0.0542 | 1.0096 | 0.0918 | 0.042* | |
C10 | 0.09938 (8) | 0.8420 (2) | 0.0668 (3) | 0.0383 (6) | |
H10A | 0.1209 | 0.8967 | −0.0008 | 0.046* | |
H10B | 0.1119 | 0.7723 | 0.1479 | 0.046* | |
N1 | 0.03677 (6) | 0.67743 (18) | 0.0111 (3) | 0.0227 (4) | |
H1A | 0.0424 (9) | 0.650 (2) | 0.118 (4) | 0.042 (8)* | |
H1B | 0.0454 (7) | 0.607 (2) | −0.068 (3) | 0.034 (7)* | |
H1C | 0.0101 (8) | 0.686 (2) | −0.001 (3) | 0.032 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0246 (10) | 0.0218 (10) | 0.0174 (10) | −0.0011 (9) | −0.0012 (9) | 0.0029 (9) |
C2 | 0.0308 (12) | 0.0221 (11) | 0.0214 (11) | −0.0006 (9) | −0.0023 (9) | −0.0045 (9) |
C3 | 0.0282 (11) | 0.0266 (11) | 0.0255 (11) | 0.0046 (9) | 0.0017 (10) | −0.0037 (10) |
C4 | 0.0212 (10) | 0.0273 (11) | 0.0190 (10) | −0.0010 (9) | −0.0001 (9) | 0.0021 (10) |
C5 | 0.0287 (11) | 0.0240 (11) | 0.0258 (12) | −0.0040 (9) | −0.0015 (10) | −0.0028 (10) |
C6 | 0.0265 (11) | 0.0207 (11) | 0.0249 (11) | 0.0018 (9) | −0.0003 (9) | −0.0036 (9) |
C7 | 0.0287 (11) | 0.0199 (10) | 0.0220 (11) | −0.0018 (9) | −0.0040 (9) | 0.0065 (10) |
O1 | 0.0329 (8) | 0.0222 (8) | 0.0238 (8) | −0.0030 (6) | −0.0087 (7) | 0.0008 (7) |
O2 | 0.0240 (8) | 0.0341 (9) | 0.0416 (10) | 0.0048 (7) | −0.0064 (7) | −0.0119 (8) |
I1 | 0.02229 (8) | 0.04054 (10) | 0.03566 (10) | −0.00054 (6) | −0.00137 (7) | −0.00002 (8) |
C8 | 0.0310 (12) | 0.0249 (11) | 0.0212 (11) | −0.0076 (9) | 0.0002 (10) | 0.0037 (9) |
C9 | 0.0491 (16) | 0.0231 (12) | 0.0337 (14) | −0.0057 (11) | 0.0002 (12) | −0.0024 (11) |
C10 | 0.0373 (14) | 0.0449 (15) | 0.0327 (14) | −0.0172 (12) | −0.0037 (11) | 0.0041 (12) |
N1 | 0.0240 (10) | 0.0213 (10) | 0.0229 (11) | 0.0007 (8) | −0.0038 (9) | −0.0004 (8) |
C1—C2 | 1.384 (3) | C7—O1 | 1.269 (2) |
C1—C6 | 1.391 (3) | C8—N1 | 1.459 (3) |
C1—C7 | 1.506 (3) | C8—C9 | 1.485 (3) |
C2—C3 | 1.384 (3) | C8—C10 | 1.490 (3) |
C2—H2 | 0.95 | C8—H8 | 1 |
C3—C4 | 1.382 (3) | C9—C10 | 1.508 (3) |
C3—H3 | 0.95 | C9—H9A | 0.99 |
C4—C5 | 1.383 (3) | C9—H9B | 0.99 |
C4—I1 | 2.101 (2) | C10—H10A | 0.99 |
C5—C6 | 1.380 (3) | C10—H10B | 0.99 |
C5—H5 | 0.95 | N1—H1A | 0.86 (3) |
C6—H6 | 0.95 | N1—H1B | 0.95 (2) |
C7—O2 | 1.253 (2) | N1—H1C | 0.83 (3) |
C2—C1—C6 | 119.13 (19) | C9—C8—C10 | 60.91 (15) |
C2—C1—C7 | 120.76 (18) | N1—C8—H8 | 115.8 |
C6—C1—C7 | 120.11 (18) | C9—C8—H8 | 115.8 |
C3—C2—C1 | 120.59 (19) | C10—C8—H8 | 115.8 |
C3—C2—H2 | 119.7 | C8—C9—C10 | 59.71 (14) |
C1—C2—H2 | 119.7 | C8—C9—H9A | 117.8 |
C4—C3—C2 | 119.3 (2) | C10—C9—H9A | 117.8 |
C4—C3—H3 | 120.4 | C8—C9—H9B | 117.8 |
C2—C3—H3 | 120.4 | C10—C9—H9B | 117.8 |
C3—C4—C5 | 121.2 (2) | H9A—C9—H9B | 114.9 |
C3—C4—I1 | 119.99 (15) | C8—C10—C9 | 59.38 (15) |
C5—C4—I1 | 118.84 (15) | C8—C10—H10A | 117.8 |
C6—C5—C4 | 118.9 (2) | C9—C10—H10A | 117.8 |
C6—C5—H5 | 120.5 | C8—C10—H10B | 117.8 |
C4—C5—H5 | 120.5 | C9—C10—H10B | 117.8 |
C5—C6—C1 | 120.91 (19) | H10A—C10—H10B | 115 |
C5—C6—H6 | 119.5 | C8—N1—H1A | 110.5 (16) |
C1—C6—H6 | 119.5 | C8—N1—H1B | 114.5 (14) |
O2—C7—O1 | 124.1 (2) | H1A—N1—H1B | 107 (2) |
O2—C7—C1 | 118.10 (19) | C8—N1—H1C | 108.7 (16) |
O1—C7—C1 | 117.78 (19) | H1A—N1—H1C | 109 (2) |
N1—C8—C9 | 118.27 (19) | H1B—N1—H1C | 107 (2) |
N1—C8—C10 | 119.23 (19) | ||
C6—C1—C2—C3 | 0.7 (3) | C2—C1—C6—C5 | 0.2 (3) |
C7—C1—C2—C3 | −178.98 (19) | C7—C1—C6—C5 | 179.90 (19) |
C1—C2—C3—C4 | −1.4 (3) | C2—C1—C7—O2 | 166.03 (19) |
C2—C3—C4—C5 | 1.1 (3) | C6—C1—C7—O2 | −13.6 (3) |
C2—C3—C4—I1 | −177.88 (16) | C2—C1—C7—O1 | −15.2 (3) |
C3—C4—C5—C6 | −0.2 (3) | C6—C1—C7—O1 | 165.19 (18) |
I1—C4—C5—C6 | 178.79 (15) | N1—C8—C9—C10 | 109.6 (2) |
C4—C5—C6—C1 | −0.5 (3) | N1—C8—C10—C9 | −108.0 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1 | 0.86 (3) | 1.95 (3) | 2.807 (3) | 173 (2) |
N1—H1B···O1i | 0.95 (2) | 1.90 (2) | 2.807 (2) | 161 (2) |
N1—H1C···O2ii | 0.83 (3) | 1.92 (3) | 2.739 (2) | 171 (2) |
Symmetry codes: (i) x, −y+1, z−1/2; (ii) −x, y, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C3H8N+·C7H4IO2− |
Mr | 305.11 |
Crystal system, space group | Orthorhombic, Pbcn |
Temperature (K) | 173 |
a, b, c (Å) | 30.7877 (6), 9.7608 (2), 7.4757 (2) |
V (Å3) | 2246.54 (9) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 2.83 |
Crystal size (mm) | 0.5 × 0.15 × 0.11 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector |
Absorption correction | Integration (XPREP; Bruker, 2004) |
Tmin, Tmax | 0.332, 0.746 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11693, 2705, 2103 |
Rint | 0.037 |
(sin θ/λ)max (Å−1) | 0.661 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.023, 0.047, 0.97 |
No. of reflections | 2705 |
No. of parameters | 139 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.42, −0.79 |
Computer programs: APEX2 (Bruker, 2005), SAINT-Plus (Bruker, 2004), SAINT-Plus and XPREP (Bruker 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and DIAMOND (Brandenburg, 1999), WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1 | 0.86 (3) | 1.95 (3) | 2.807 (3) | 173 (2) |
N1—H1B···O1i | 0.95 (2) | 1.90 (2) | 2.807 (2) | 161 (2) |
N1—H1C···O2ii | 0.83 (3) | 1.92 (3) | 2.739 (2) | 171 (2) |
Symmetry codes: (i) x, −y+1, z−1/2; (ii) −x, y, −z+1/2. |
Acknowledgements
The University of Cape Town is thanked for providing the infrastructure required to do this work and the National Research Fund (SFP2006061500015) for the award of a postdoctoral fellowship.
References
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Ammonium carboxylate salts are molecular salts formed by mixing a primary amine and a carboxylic acid containing molecule, thus resulting in proton transfer from the acid to the amine (Kinbara et al., 1996). This forms a primary ammonium cation and a carboxylate anion. The three H atoms on the cation can then form three charge-assisted hydrogen bonds to the two O atoms on the anion. In the literature, three kinds of hydrogen bonded rings are most commonly formed by these hydrogen bonds, described using graph-set notation (Bernstein et al., 1995): R24(8), R34(10) and R44(12) (Lemmerer, 2011).
In molecular salt (I), shown in Fig. 1, formed by dissolving cyclopropylamine and p-iodobenzoic acid in methanol, only a R44(12) ring is formed. However, two such rings are formed, one by using the N1—H1A···O1 and N1—H1B···O1 hydrogen bonds, and the second one by using the N1—H1B···O1 and N1—H1C···O2 hydrogen bonds. As the N1—H1B···O1 hydrogen bond is common to both rings, a repetition of the two types of rings results, forming a 1-D hydrogen bonded column along the c axis (Fig. 2).