metal-organic compounds
(Bipyridine-κ2N,N′)chlorido[N-(2-hydroxyethyl)-N-isopropyldithiocarbamato-κ2S,S′]zinc(II)
aSchool of Chemical Sciences and Food Technology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 Bangi, Malaysia, bDepartment of Chemistry, Universiti Putra Malaysia, 43400 Serdang, Malaysia, and cDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
The ZnII atom in the title compound, [Zn(C6H12NOS2)Cl(C10H8N2)], is coordinated by a chelating N-2-hydroxyethyl-N-isopropyldithiocarbamate ligand, a 2,2′-bipyridine ligand and a Cl atom. The resulting ClN2S2 donor set defines a distorted square-pyramidal coordination geometry. Helical supramolecular chains sustained by O—H⋯S hydrogen bonds and propagating along the b axis feature in the crystal packing. A three-dimensional architecture is stabilized by C—H⋯O, C—H⋯S and C—H⋯Cl interactions.
Related literature
For crystal engineering studies on zinc complexes with fuctionalized dithiocarbamate ligands, see: Benson et al. (2007); Poplaukhin & Tiekink (2010). For the distinction between square-pyramidal and trigonal-bipyramidal geometries, see: Addison et al. (1984).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2011); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536812027626/bt5940sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812027626/bt5940Isup2.hkl
This compound was prepared using the in situ method by the addition of carbon disulfide (0.01 mol) to an ethanolic solution of isopropylethanolamine (0.01 mol). The mixture was stirred for one hour at 277 K. Then, it was added drop-wise to a solution of zinc dichloride (0.005 mol) in ethanol (20 ml) followed by 2,2'-bipyridine (0.01 mol) in ethanol (20 ml). The mixture was stirred for another two hours at 277 K. The white precipitate was filtered, washed with cold ethanol and dried in a desiccator. Crystallization was from its ethanol:chloroform (1:2) solution held at room temperature. Yield: 65.5%. M.pt. 424–426 K. Elemental analysis. Found (calculated) for C16H20ClN3OS2Zn: C, 45.21 (44.70); H 3.59 (3.50); N 9.69 (9.70); S 15.12 (14.90)%. IR (KBr): ν(O—H) 3391 m; ν(C≐N) 1442 s; ν(C≐S) 944 s; ν(Zn—S) 368 m cm-1.
Carbon-bound H-atoms were placed in calculated positions (C—H 0.95 to 0.99 Å) and were included in the
in the riding model approximation, with Uiso(H) = 1.2 to 1.5Uequiv(C). The oxygen-bound H-atom was refined with O—H = 0.84±0.01 Å and Uiso(H) = 1.5Uequiv(O).Introducing hydroxylethyl functionality into dithiocarbamate ligands facilitates the formation of higher dimensionality in their crystal structures (Benson et al., 2007; Poplaukhin & Tiekink, 2010). As a continuation of these studies, herein, the title compound, Zn[S2CN(CH2CH2OH)iPr](2,2'-bipyridine)Cl, (I), is described.
The molecular structure of (I), Fig. 1, features a ZnII atom coordinated by a dithiocarbamate ligand, two N atoms of the 2,2'-bipyridine ligand and a chloride. The dithiocarbamate ligand coordinates essentially in a bidentate mode, an assignment supported by the near equivalence of the C—S bond distances, Table 1. The resulting ClN2S2 donor set defines a coordination geometry intermediate between square pyramidal and trigonal bipyramidal geometry. This is quantified by the value of τ = 0.23 which compares to the τ values of 0.0 and 1.0 for ideal square pyramidal and trigonal bipyramidal geometries, respectively (Addison et al., 1984).
The crystal packing of (I) features helical supramolecular chains along the b axis that are sustained by O—H···S interactions, Fig. 2 and Table 2. Additional stability to the chains are afforded by C—H···O and C—H···S interactions, Table 2. The chains are connected into a three-dimensional architecture by C—H···Cl interactions, Fig. 3 and Table 1.
For crystal engineering studies on zinc complexes with fuctionalized dithiocarbamate ligands, see: Benson et al. (2007); Poplaukhin & Tiekink (2010). For the distinction between square-pyramidal and trigonal-bipyramidal geometries, see: Addison et al. (1984).
Data collection: CrysAlis PRO (Agilent, 2011); cell
CrysAlis PRO (Agilent, 2011); data reduction: CrysAlis PRO (Agilent, 2011); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).[Zn(C6H12NOS2)Cl(C10H8N2)] | F(000) = 896 |
Mr = 435.29 | Dx = 1.588 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 4897 reflections |
a = 14.5008 (10) Å | θ = 2.4–28.7° |
b = 8.6216 (4) Å | µ = 1.73 mm−1 |
c = 15.9905 (9) Å | T = 100 K |
β = 114.423 (7)° | Block, colourless |
V = 1820.25 (18) Å3 | 0.35 × 0.20 × 0.12 mm |
Z = 4 |
Oxford Diffraction Xcaliber Eos Gemini diffractometer | 4061 independent reflections |
Radiation source: fine-focus sealed tube | 3603 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.034 |
Detector resolution: 16.1952 pixels mm-1 | θmax = 27.5°, θmin = 2.5° |
ω scans | h = −17→18 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | k = −11→9 |
Tmin = 0.882, Tmax = 1.000 | l = −20→20 |
11927 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.071 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0245P)2 + 1.5375P] where P = (Fo2 + 2Fc2)/3 |
4061 reflections | (Δ/σ)max = 0.001 |
222 parameters | Δρmax = 0.83 e Å−3 |
1 restraint | Δρmin = −0.37 e Å−3 |
[Zn(C6H12NOS2)Cl(C10H8N2)] | V = 1820.25 (18) Å3 |
Mr = 435.29 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 14.5008 (10) Å | µ = 1.73 mm−1 |
b = 8.6216 (4) Å | T = 100 K |
c = 15.9905 (9) Å | 0.35 × 0.20 × 0.12 mm |
β = 114.423 (7)° |
Oxford Diffraction Xcaliber Eos Gemini diffractometer | 4061 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | 3603 reflections with I > 2σ(I) |
Tmin = 0.882, Tmax = 1.000 | Rint = 0.034 |
11927 measured reflections |
R[F2 > 2σ(F2)] = 0.031 | 1 restraint |
wR(F2) = 0.071 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.83 e Å−3 |
4061 reflections | Δρmin = −0.37 e Å−3 |
222 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn | 0.330691 (19) | 0.17193 (3) | 0.503343 (15) | 0.01377 (8) | |
Cl1 | 0.35450 (4) | 0.06878 (6) | 0.38450 (3) | 0.01704 (12) | |
S1 | 0.17619 (4) | 0.07781 (6) | 0.51151 (3) | 0.01631 (12) | |
S2 | 0.38248 (4) | −0.02253 (6) | 0.63081 (3) | 0.01617 (12) | |
O1 | 0.29263 (14) | −0.1242 (2) | 0.85472 (11) | 0.0279 (4) | |
H1o | 0.294 (2) | −0.194 (2) | 0.8922 (15) | 0.030* | |
N1 | 0.21773 (14) | −0.1346 (2) | 0.64509 (12) | 0.0164 (4) | |
N2 | 0.44495 (14) | 0.3303 (2) | 0.58105 (11) | 0.0142 (4) | |
N3 | 0.26566 (14) | 0.3969 (2) | 0.45052 (11) | 0.0148 (4) | |
C1 | 0.25446 (16) | −0.0378 (2) | 0.60191 (13) | 0.0146 (4) | |
C2 | 0.28503 (17) | −0.2471 (3) | 0.71296 (14) | 0.0183 (5) | |
H2A | 0.3303 | −0.2945 | 0.6878 | 0.022* | |
H2B | 0.2429 | −0.3310 | 0.7211 | 0.022* | |
C3 | 0.34975 (19) | −0.1781 (3) | 0.80665 (15) | 0.0239 (5) | |
H3A | 0.3983 | −0.2578 | 0.8444 | 0.029* | |
H3B | 0.3894 | −0.0906 | 0.7984 | 0.029* | |
C4 | 0.10593 (17) | −0.1546 (3) | 0.61485 (15) | 0.0179 (5) | |
H4 | 0.0724 | −0.0613 | 0.5774 | 0.021* | |
C5 | 0.07640 (18) | −0.1600 (3) | 0.69567 (15) | 0.0225 (5) | |
H5A | 0.0974 | −0.2595 | 0.7276 | 0.034* | |
H5B | 0.0028 | −0.1489 | 0.6733 | 0.034* | |
H5C | 0.1099 | −0.0752 | 0.7382 | 0.034* | |
C6 | 0.06906 (18) | −0.2952 (3) | 0.55214 (15) | 0.0238 (5) | |
H6A | 0.0830 | −0.2801 | 0.4977 | 0.036* | |
H6B | −0.0040 | −0.3080 | 0.5332 | 0.036* | |
H6C | 0.1045 | −0.3882 | 0.5852 | 0.036* | |
C7 | 0.53526 (17) | 0.2870 (3) | 0.64499 (14) | 0.0181 (5) | |
H7 | 0.5487 | 0.1796 | 0.6569 | 0.022* | |
C8 | 0.61006 (17) | 0.3927 (3) | 0.69449 (15) | 0.0198 (5) | |
H8 | 0.6734 | 0.3585 | 0.7396 | 0.024* | |
C9 | 0.59019 (17) | 0.5490 (3) | 0.67659 (14) | 0.0198 (5) | |
H9 | 0.6401 | 0.6241 | 0.7092 | 0.024* | |
C10 | 0.49646 (17) | 0.5954 (3) | 0.61041 (14) | 0.0172 (5) | |
H10 | 0.4815 | 0.7024 | 0.5974 | 0.021* | |
C11 | 0.42524 (16) | 0.4830 (2) | 0.56367 (13) | 0.0138 (4) | |
C12 | 0.32424 (16) | 0.5203 (3) | 0.48989 (13) | 0.0141 (4) | |
C13 | 0.29299 (18) | 0.6707 (3) | 0.46101 (14) | 0.0188 (5) | |
H13 | 0.3355 | 0.7563 | 0.4897 | 0.023* | |
C14 | 0.19875 (19) | 0.6939 (3) | 0.38968 (14) | 0.0215 (5) | |
H14 | 0.1757 | 0.7960 | 0.3692 | 0.026* | |
C15 | 0.13850 (18) | 0.5670 (3) | 0.34845 (15) | 0.0224 (5) | |
H15 | 0.0740 | 0.5801 | 0.2989 | 0.027* | |
C16 | 0.17453 (17) | 0.4209 (3) | 0.38117 (14) | 0.0199 (5) | |
H16 | 0.1331 | 0.3336 | 0.3535 | 0.024* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn | 0.01493 (14) | 0.01139 (14) | 0.01590 (12) | −0.00257 (10) | 0.00730 (10) | −0.00175 (9) |
Cl1 | 0.0189 (3) | 0.0167 (3) | 0.0165 (2) | 0.0009 (2) | 0.0083 (2) | −0.00189 (19) |
S1 | 0.0165 (3) | 0.0150 (3) | 0.0181 (2) | 0.0020 (2) | 0.0078 (2) | 0.0045 (2) |
S2 | 0.0143 (3) | 0.0157 (3) | 0.0171 (2) | −0.0017 (2) | 0.0050 (2) | 0.0012 (2) |
O1 | 0.0363 (11) | 0.0248 (10) | 0.0236 (8) | −0.0009 (8) | 0.0135 (8) | 0.0025 (7) |
N1 | 0.0153 (9) | 0.0171 (10) | 0.0164 (8) | 0.0000 (8) | 0.0063 (7) | 0.0021 (7) |
N2 | 0.0166 (9) | 0.0127 (9) | 0.0157 (8) | −0.0020 (7) | 0.0091 (7) | −0.0006 (7) |
N3 | 0.0163 (9) | 0.0140 (9) | 0.0156 (8) | −0.0029 (8) | 0.0081 (7) | −0.0023 (7) |
C1 | 0.0166 (11) | 0.0131 (11) | 0.0144 (9) | 0.0006 (9) | 0.0067 (8) | −0.0018 (8) |
C2 | 0.0184 (11) | 0.0154 (12) | 0.0199 (10) | 0.0021 (10) | 0.0066 (9) | 0.0059 (9) |
C3 | 0.0245 (13) | 0.0265 (13) | 0.0193 (11) | −0.0029 (11) | 0.0077 (9) | 0.0032 (9) |
C4 | 0.0144 (11) | 0.0188 (12) | 0.0209 (10) | −0.0009 (9) | 0.0077 (9) | 0.0033 (9) |
C5 | 0.0186 (12) | 0.0288 (14) | 0.0226 (11) | −0.0058 (10) | 0.0110 (9) | −0.0003 (10) |
C6 | 0.0164 (12) | 0.0291 (14) | 0.0239 (11) | −0.0027 (11) | 0.0064 (9) | −0.0041 (10) |
C7 | 0.0169 (11) | 0.0187 (12) | 0.0209 (10) | 0.0005 (10) | 0.0099 (9) | 0.0026 (9) |
C8 | 0.0155 (11) | 0.0261 (13) | 0.0178 (10) | −0.0018 (10) | 0.0070 (8) | 0.0007 (9) |
C9 | 0.0186 (12) | 0.0250 (13) | 0.0184 (10) | −0.0082 (10) | 0.0103 (9) | −0.0058 (9) |
C10 | 0.0197 (12) | 0.0154 (11) | 0.0191 (10) | −0.0030 (9) | 0.0107 (9) | −0.0033 (8) |
C11 | 0.0178 (11) | 0.0126 (11) | 0.0150 (9) | −0.0035 (9) | 0.0105 (8) | −0.0020 (8) |
C12 | 0.0187 (11) | 0.0142 (11) | 0.0125 (9) | −0.0011 (9) | 0.0096 (8) | −0.0022 (8) |
C13 | 0.0274 (13) | 0.0127 (11) | 0.0162 (10) | −0.0017 (10) | 0.0089 (9) | −0.0008 (8) |
C14 | 0.0298 (14) | 0.0176 (12) | 0.0171 (10) | 0.0048 (10) | 0.0096 (9) | 0.0030 (9) |
C15 | 0.0207 (12) | 0.0267 (13) | 0.0177 (10) | 0.0032 (10) | 0.0059 (9) | 0.0003 (9) |
C16 | 0.0179 (12) | 0.0233 (13) | 0.0176 (10) | −0.0029 (10) | 0.0065 (9) | −0.0020 (9) |
Zn—Cl1 | 2.2503 (5) | C5—H5A | 0.9800 |
Zn—S1 | 2.4366 (6) | C5—H5B | 0.9800 |
Zn—S2 | 2.5026 (6) | C5—H5C | 0.9800 |
Zn—N2 | 2.1097 (18) | C6—H6A | 0.9800 |
Zn—N3 | 2.1692 (18) | C6—H6B | 0.9800 |
S1—C1 | 1.736 (2) | C6—H6C | 0.9800 |
S2—C1 | 1.723 (2) | C7—C8 | 1.386 (3) |
O1—C3 | 1.421 (3) | C7—H7 | 0.9500 |
O1—H1o | 0.844 (10) | C8—C9 | 1.383 (3) |
N1—C1 | 1.327 (3) | C8—H8 | 0.9500 |
N1—C2 | 1.482 (3) | C9—C10 | 1.392 (3) |
N1—C4 | 1.498 (3) | C9—H9 | 0.9500 |
N2—C7 | 1.339 (3) | C10—C11 | 1.388 (3) |
N2—C11 | 1.351 (3) | C10—H10 | 0.9500 |
N3—C16 | 1.344 (3) | C11—C12 | 1.487 (3) |
N3—C12 | 1.344 (3) | C12—C13 | 1.388 (3) |
C2—C3 | 1.522 (3) | C13—C14 | 1.386 (3) |
C2—H2A | 0.9900 | C13—H13 | 0.9500 |
C2—H2B | 0.9900 | C14—C15 | 1.386 (3) |
C3—H3A | 0.9900 | C14—H14 | 0.9500 |
C3—H3B | 0.9900 | C15—C16 | 1.381 (3) |
C4—C5 | 1.521 (3) | C15—H15 | 0.9500 |
C4—C6 | 1.523 (3) | C16—H16 | 0.9500 |
C4—H4 | 1.0000 | ||
N2—Zn—N3 | 76.10 (7) | C4—C5—H5A | 109.5 |
N2—Zn—Cl1 | 113.32 (5) | C4—C5—H5B | 109.5 |
N3—Zn—Cl1 | 102.61 (5) | H5A—C5—H5B | 109.5 |
N2—Zn—S1 | 134.39 (5) | C4—C5—H5C | 109.5 |
N3—Zn—S1 | 93.28 (5) | H5A—C5—H5C | 109.5 |
Cl1—Zn—S1 | 112.28 (2) | H5B—C5—H5C | 109.5 |
N2—Zn—S2 | 93.20 (5) | C4—C6—H6A | 109.5 |
N3—Zn—S2 | 148.41 (5) | C4—C6—H6B | 109.5 |
Cl1—Zn—S2 | 108.90 (2) | H6A—C6—H6B | 109.5 |
S1—Zn—S2 | 72.914 (19) | C4—C6—H6C | 109.5 |
C1—S1—Zn | 86.37 (8) | H6A—C6—H6C | 109.5 |
C1—S2—Zn | 84.58 (7) | H6B—C6—H6C | 109.5 |
C3—O1—H1o | 107 (2) | N2—C7—C8 | 122.7 (2) |
C1—N1—C2 | 120.56 (19) | N2—C7—H7 | 118.6 |
C1—N1—C4 | 121.19 (18) | C8—C7—H7 | 118.6 |
C2—N1—C4 | 117.28 (17) | C9—C8—C7 | 118.4 (2) |
C7—N2—C11 | 119.03 (19) | C9—C8—H8 | 120.8 |
C7—N2—Zn | 123.48 (15) | C7—C8—H8 | 120.8 |
C11—N2—Zn | 117.49 (14) | C8—C9—C10 | 119.5 (2) |
C16—N3—C12 | 118.67 (19) | C8—C9—H9 | 120.3 |
C16—N3—Zn | 125.42 (15) | C10—C9—H9 | 120.3 |
C12—N3—Zn | 115.87 (14) | C11—C10—C9 | 118.9 (2) |
N1—C1—S2 | 121.89 (16) | C11—C10—H10 | 120.5 |
N1—C1—S1 | 121.97 (17) | C9—C10—H10 | 120.5 |
S2—C1—S1 | 116.13 (12) | N2—C11—C10 | 121.5 (2) |
N1—C2—C3 | 114.61 (19) | N2—C11—C12 | 115.40 (18) |
N1—C2—H2A | 108.6 | C10—C11—C12 | 123.1 (2) |
C3—C2—H2A | 108.6 | N3—C12—C13 | 121.8 (2) |
N1—C2—H2B | 108.6 | N3—C12—C11 | 115.14 (19) |
C3—C2—H2B | 108.6 | C13—C12—C11 | 123.0 (2) |
H2A—C2—H2B | 107.6 | C14—C13—C12 | 119.0 (2) |
O1—C3—C2 | 113.6 (2) | C14—C13—H13 | 120.5 |
O1—C3—H3A | 108.8 | C12—C13—H13 | 120.5 |
C2—C3—H3A | 108.8 | C13—C14—C15 | 119.4 (2) |
O1—C3—H3B | 108.8 | C13—C14—H14 | 120.3 |
C2—C3—H3B | 108.8 | C15—C14—H14 | 120.3 |
H3A—C3—H3B | 107.7 | C16—C15—C14 | 118.4 (2) |
N1—C4—C5 | 112.13 (17) | C16—C15—H15 | 120.8 |
N1—C4—C6 | 110.02 (18) | C14—C15—H15 | 120.8 |
C5—C4—C6 | 112.90 (19) | N3—C16—C15 | 122.8 (2) |
N1—C4—H4 | 107.2 | N3—C16—H16 | 118.6 |
C5—C4—H4 | 107.2 | C15—C16—H16 | 118.6 |
C6—C4—H4 | 107.2 | ||
N2—Zn—S1—C1 | −77.16 (10) | C4—N1—C2—C3 | −113.0 (2) |
N3—Zn—S1—C1 | −150.87 (8) | N1—C2—C3—O1 | 66.0 (3) |
Cl1—Zn—S1—C1 | 104.07 (7) | C1—N1—C4—C5 | −137.2 (2) |
S2—Zn—S1—C1 | 0.17 (7) | C2—N1—C4—C5 | 54.0 (3) |
N2—Zn—S2—C1 | 135.54 (9) | C1—N1—C4—C6 | 96.3 (2) |
N3—Zn—S2—C1 | 67.16 (12) | C2—N1—C4—C6 | −72.5 (2) |
Cl1—Zn—S2—C1 | −108.48 (7) | C11—N2—C7—C8 | 0.0 (3) |
S1—Zn—S2—C1 | −0.17 (7) | Zn—N2—C7—C8 | 179.02 (16) |
N3—Zn—N2—C7 | −178.42 (18) | N2—C7—C8—C9 | −0.2 (3) |
Cl1—Zn—N2—C7 | −80.48 (17) | C7—C8—C9—C10 | 0.3 (3) |
S1—Zn—N2—C7 | 100.76 (17) | C8—C9—C10—C11 | −0.2 (3) |
S2—Zn—N2—C7 | 31.69 (16) | C7—N2—C11—C10 | 0.1 (3) |
N3—Zn—N2—C11 | 0.66 (14) | Zn—N2—C11—C10 | −179.00 (15) |
Cl1—Zn—N2—C11 | 98.60 (15) | C7—N2—C11—C12 | 178.38 (18) |
S1—Zn—N2—C11 | −80.16 (16) | Zn—N2—C11—C12 | −0.7 (2) |
S2—Zn—N2—C11 | −149.23 (14) | C9—C10—C11—N2 | 0.0 (3) |
N2—Zn—N3—C16 | 177.47 (18) | C9—C10—C11—C12 | −178.10 (19) |
Cl1—Zn—N3—C16 | 66.22 (17) | C16—N3—C12—C13 | 0.2 (3) |
S1—Zn—N3—C16 | −47.48 (17) | Zn—N3—C12—C13 | 178.27 (16) |
S2—Zn—N3—C16 | −109.55 (17) | C16—N3—C12—C11 | −177.85 (18) |
N2—Zn—N3—C12 | −0.47 (14) | Zn—N3—C12—C11 | 0.2 (2) |
Cl1—Zn—N3—C12 | −111.72 (14) | N2—C11—C12—N3 | 0.3 (3) |
S1—Zn—N3—C12 | 134.57 (14) | C10—C11—C12—N3 | 178.54 (19) |
S2—Zn—N3—C12 | 72.51 (18) | N2—C11—C12—C13 | −177.68 (19) |
C2—N1—C1—S2 | −7.2 (3) | C10—C11—C12—C13 | 0.5 (3) |
C4—N1—C1—S2 | −175.69 (15) | N3—C12—C13—C14 | 0.1 (3) |
C2—N1—C1—S1 | 171.42 (15) | C11—C12—C13—C14 | 177.9 (2) |
C4—N1—C1—S1 | 2.9 (3) | C12—C13—C14—C15 | −0.6 (3) |
Zn—S2—C1—N1 | 178.96 (18) | C13—C14—C15—C16 | 0.8 (3) |
Zn—S2—C1—S1 | 0.26 (11) | C12—N3—C16—C15 | 0.1 (3) |
Zn—S1—C1—N1 | −178.97 (18) | Zn—N3—C16—C15 | −177.77 (17) |
Zn—S1—C1—S2 | −0.26 (11) | C14—C15—C16—N3 | −0.6 (3) |
C1—N1—C2—C3 | 78.0 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1o···S1i | 0.84 (2) | 2.42 (2) | 3.2528 (18) | 167 (2) |
C6—H6c···O1i | 0.98 | 2.47 | 3.438 (3) | 169 |
C13—H13···S2ii | 0.95 | 2.81 | 3.625 (2) | 144 |
C7—H7···Cl1iii | 0.95 | 2.79 | 3.579 (3) | 142 |
C8—H8···Cl1iv | 0.95 | 2.76 | 3.606 (2) | 148 |
Symmetry codes: (i) −x+1/2, y−1/2, −z+3/2; (ii) x, y+1, z; (iii) −x+1, −y, −z+1; (iv) x+1/2, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C6H12NOS2)Cl(C10H8N2)] |
Mr | 435.29 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 100 |
a, b, c (Å) | 14.5008 (10), 8.6216 (4), 15.9905 (9) |
β (°) | 114.423 (7) |
V (Å3) | 1820.25 (18) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.73 |
Crystal size (mm) | 0.35 × 0.20 × 0.12 |
Data collection | |
Diffractometer | Oxford Diffraction Xcaliber Eos Gemini |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2011) |
Tmin, Tmax | 0.882, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11927, 4061, 3603 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.031, 0.071, 1.04 |
No. of reflections | 4061 |
No. of parameters | 222 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.83, −0.37 |
Computer programs: CrysAlis PRO (Agilent, 2011), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
Zn—Cl1 | 2.2503 (5) | Zn—N3 | 2.1692 (18) |
Zn—S1 | 2.4366 (6) | S1—C1 | 1.736 (2) |
Zn—S2 | 2.5026 (6) | S2—C1 | 1.723 (2) |
Zn—N2 | 2.1097 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1o···S1i | 0.84 (2) | 2.424 (19) | 3.2528 (18) | 167 (2) |
C6—H6c···O1i | 0.98 | 2.47 | 3.438 (3) | 169 |
C13—H13···S2ii | 0.95 | 2.81 | 3.625 (2) | 144 |
C7—H7···Cl1iii | 0.95 | 2.79 | 3.579 (3) | 142 |
C8—H8···Cl1iv | 0.95 | 2.76 | 3.606 (2) | 148 |
Symmetry codes: (i) −x+1/2, y−1/2, −z+3/2; (ii) x, y+1, z; (iii) −x+1, −y, −z+1; (iv) x+1/2, −y+1/2, z+1/2. |
Footnotes
‡Additional correspondence author, e-mail: aibi@ukm.my.
Acknowledgements
The authors thank Universiti Kebangsaan Malaysia (UKM-GUP-NBT-08–27-111), the Ministry of Higher Education (UKM-ST-06-FRGS0092–2010) and Universiti Putra Malaysia for supporting this study. Structural studies are supported by the Ministry of Higher Education through the High-Impact Research scheme (UM.C/HIR/MOHE/SC/3).
References
Addison, A. W., Rao, T. N., Reedijk, J., van Rijn, J. & Verschoor, G. C. (1984). J. Chem. Soc. Dalton Trans. pp. 1349–1356. CSD CrossRef Web of Science Google Scholar
Agilent (2011). CrysAlis PRO. Agilent Technologies, Yarnton, England. Google Scholar
Benson, R. E., Ellis, C. A., Lewis, C. E. & Tiekink, E. R. T. (2007). CrystEngComm, 9, 930–941. Web of Science CSD CrossRef CAS Google Scholar
Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Poplaukhin, P. & Tiekink, E. R. T. (2010). CrystEngComm, 12, 1302–1306. Web of Science CSD CrossRef Google Scholar
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Introducing hydroxylethyl functionality into dithiocarbamate ligands facilitates the formation of higher dimensionality in their crystal structures (Benson et al., 2007; Poplaukhin & Tiekink, 2010). As a continuation of these studies, herein, the title compound, Zn[S2CN(CH2CH2OH)iPr](2,2'-bipyridine)Cl, (I), is described.
The molecular structure of (I), Fig. 1, features a ZnII atom coordinated by a dithiocarbamate ligand, two N atoms of the 2,2'-bipyridine ligand and a chloride. The dithiocarbamate ligand coordinates essentially in a bidentate mode, an assignment supported by the near equivalence of the C—S bond distances, Table 1. The resulting ClN2S2 donor set defines a coordination geometry intermediate between square pyramidal and trigonal bipyramidal geometry. This is quantified by the value of τ = 0.23 which compares to the τ values of 0.0 and 1.0 for ideal square pyramidal and trigonal bipyramidal geometries, respectively (Addison et al., 1984).
The crystal packing of (I) features helical supramolecular chains along the b axis that are sustained by O—H···S interactions, Fig. 2 and Table 2. Additional stability to the chains are afforded by C—H···O and C—H···S interactions, Table 2. The chains are connected into a three-dimensional architecture by C—H···Cl interactions, Fig. 3 and Table 1.