organic compounds
Ethyl 4-[({[(6-chloropyridin-3-yl)methyl](methyl)amino}(4-fluoroanilino)methylidene)amino]-3-phenyl-2-sulfanylidene-2,3-dihydro-1,3-thiazole-5-carboxylate
aHubei Biopesticide Engineering Research Center, Hubei Academy of Agricultural Science, Wuhan 430064, People's Republic of China, and bKey Laboratory of Pesticide & Chemical Biology of the Ministry of Education, Central China Normal University, Wuhan 430079, People's Republic of China.
*Correspondence e-mail: ly.liang8@gmail.com
In the title compound, C26H23ClFN5O2S2, the mean plane of the guanidine fragment makes dihedral angles of 58.94 (13), 78.37 (17) and 50.76 (15)°, respectively, with the attached thiazole, pyridine and phenyl rings. The features N—H⋯S and C—H⋯O hydrogen bonds and weak π–π stacking interactions [centroid–centroid separation = 3.7702 (17) Å]. The terminal methyl group of the ethoxycarbonyl group is disordered over two orientations in a 0.836 (10):0.164 (10) ratio.
Related literature
For further synthetic details and background to thiazolopyrimidines, see: Liang et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2000); cell SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536812026311/hb6808sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812026311/hb6808Isup2.hkl
To a solution of the iminophosphorane (1 mmol) in dry CH2Cl2(15 ml) was added 4-fluorophenyl isocyanate (1.1 mmol) under an N2 atmosphere at room tempreture. After the reaction mixture was allowed to stand for 5–12 h, the solvent was removed under reduced pressure, then Et2O and petroleum ether were added to precipitate the side product triphenylphosphine oxide which was then removed by filtration. Subsequent removal of the solvent gave the corresponding carbodiimide, which was used directly without further purification. To a solution of the carbodiimide in ethanol(15 ml) was added 1-(6-chloropyridin-3-yl)-N-methyl methanamine (1.1 mmol) and a catalytic amount of sodium ethoxide in ethanol. After the mixture had been stirred for 4 h at 303 K, the solution was concentrated and the residue was recrystallized from CH3CN solution to give colorless blocks of the title compound, (I), after one week.
All H-atoms bound to carbon were refined using a riding model with d(C—H) = 0.93 Å, Uiso=1.2Ueq (C) for aromatic 0.98 Å, Uiso = 1.2Ueq (C) for CH 0.96 Å, Uiso = 1.5Ueq (C) for CH3 H atoms.
Recently, we have developed a new and versatile
process, which proceeded smoothly under mild conditions via a tandem aza-wittig and reaction (Liang et al., 2007), to synthesize new thiazolo[4,5-d]pyrimidine derivatives with possible herbicidal activities. In this paper, we report the structure of the intermediate guanidine derivative, (I) (Fig. 1).In the molecule of the title compound, (I), the mean plane of the guanidine system is nearly coplannar. The three π-π stacking interactions [Cg1···Cg3i = 3.7702 (17) Å; symmetry code: (i) x, y, z]. The atom C26 was disorder.
are roughly twisted from the central guanidine system, the dihedral being 58.94 (13)°(thiazole), 78.37 (17)° (pyridine) and 50.76 (15)° (p-fluorophenyl) respectively, and the thiazole ring is nearly planar with the ethyloxyacyl group. The crystal packing is stabilized by C—H···O and C—H···S hydrogen bonds (Table 1) and weakFor further synthetic details and background to thiazolopyrimidines, see: Liang et al. (2007).
Data collection: SMART (Bruker, 2000); cell
SAINT (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The structure of (I), showing 50% probability displacement ellipsoids. | |
Fig. 2. Crystal Packing diagram of (I). Hydrogen bonds are shown as dashed lines. |
C26H23ClFN5O2S2 | F(000) = 1152 |
Mr = 556.06 | Dx = 1.364 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 9.6931 (5) Å | Cell parameters from 4840 reflections |
b = 24.5636 (12) Å | θ = 2.3–25.7° |
c = 11.7095 (6) Å | µ = 0.34 mm−1 |
β = 103.745 (1)° | T = 298 K |
V = 2708.2 (2) Å3 | Needle, colourless |
Z = 4 | 0.20 × 0.10 × 0.06 mm |
Bruker SMART APEX CCD diffractometer | 5326 independent reflections |
Radiation source: fine-focus sealed tube | 3569 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.097 |
φ and ω scans | θmax = 26.0°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | h = −11→11 |
Tmin = 0.936, Tmax = 0.980 | k = −30→27 |
23442 measured reflections | l = −14→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.061 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.172 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | w = 1/[σ2(Fo2) + (0.0958P)2] where P = (Fo2 + 2Fc2)/3 |
5326 reflections | (Δ/σ)max < 0.001 |
350 parameters | Δρmax = 0.50 e Å−3 |
23 restraints | Δρmin = −0.40 e Å−3 |
C26H23ClFN5O2S2 | V = 2708.2 (2) Å3 |
Mr = 556.06 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.6931 (5) Å | µ = 0.34 mm−1 |
b = 24.5636 (12) Å | T = 298 K |
c = 11.7095 (6) Å | 0.20 × 0.10 × 0.06 mm |
β = 103.745 (1)° |
Bruker SMART APEX CCD diffractometer | 5326 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | 3569 reflections with I > 2σ(I) |
Tmin = 0.936, Tmax = 0.980 | Rint = 0.097 |
23442 measured reflections |
R[F2 > 2σ(F2)] = 0.061 | 23 restraints |
wR(F2) = 0.172 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | Δρmax = 0.50 e Å−3 |
5326 reflections | Δρmin = −0.40 e Å−3 |
350 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.2452 (4) | 0.72915 (14) | 0.9071 (4) | 0.0648 (10) | |
C2 | 0.2408 (5) | 0.69171 (16) | 0.8193 (3) | 0.0750 (11) | |
H2 | 0.2568 | 0.7017 | 0.7470 | 0.090* | |
C3 | 0.2115 (5) | 0.63856 (14) | 0.8432 (3) | 0.0682 (10) | |
H3 | 0.2079 | 0.6119 | 0.7862 | 0.082* | |
C4 | 0.1875 (3) | 0.62471 (12) | 0.9506 (2) | 0.0441 (7) | |
C5 | 0.1929 (4) | 0.66619 (14) | 1.0298 (3) | 0.0652 (10) | |
H5 | 0.1753 | 0.6574 | 1.1023 | 0.078* | |
C6 | 0.1574 (3) | 0.56709 (12) | 0.9822 (3) | 0.0470 (8) | |
H6A | 0.2467 | 0.5477 | 1.0065 | 0.056* | |
H6B | 0.1137 | 0.5679 | 1.0486 | 0.056* | |
C7 | −0.0833 (3) | 0.55378 (12) | 0.8587 (3) | 0.0499 (8) | |
H7A | −0.1147 | 0.5606 | 0.7759 | 0.075* | |
H7B | −0.0936 | 0.5863 | 0.9014 | 0.075* | |
H7C | −0.1396 | 0.5252 | 0.8806 | 0.075* | |
C8 | 0.1212 (3) | 0.50286 (11) | 0.8189 (2) | 0.0386 (7) | |
C9 | 0.0566 (3) | 0.44719 (12) | 0.6372 (2) | 0.0411 (7) | |
C10 | −0.0089 (3) | 0.39778 (13) | 0.6085 (3) | 0.0515 (8) | |
H10 | −0.0700 | 0.3841 | 0.6519 | 0.062* | |
C11 | 0.0165 (4) | 0.36822 (14) | 0.5142 (3) | 0.0620 (9) | |
H11 | −0.0294 | 0.3353 | 0.4921 | 0.074* | |
C12 | 0.1103 (4) | 0.38872 (15) | 0.4550 (3) | 0.0602 (9) | |
C13 | 0.1761 (4) | 0.43763 (14) | 0.4815 (3) | 0.0541 (8) | |
H13 | 0.2397 | 0.4504 | 0.4395 | 0.065* | |
C14 | 0.1462 (3) | 0.46790 (13) | 0.5720 (2) | 0.0452 (7) | |
H14 | 0.1864 | 0.5022 | 0.5891 | 0.054* | |
C15 | 0.3352 (3) | 0.45864 (12) | 0.8084 (2) | 0.0383 (7) | |
C16 | 0.3268 (3) | 0.40313 (12) | 0.8165 (2) | 0.0436 (7) | |
C17 | 0.5342 (3) | 0.43200 (13) | 0.7403 (2) | 0.0434 (7) | |
C18 | 0.4900 (3) | 0.53030 (12) | 0.7543 (2) | 0.0408 (7) | |
C19 | 0.4673 (4) | 0.55250 (14) | 0.6438 (3) | 0.0537 (8) | |
H19 | 0.4318 | 0.5311 | 0.5778 | 0.064* | |
C20 | 0.4975 (4) | 0.60657 (15) | 0.6316 (4) | 0.0699 (10) | |
H20 | 0.4817 | 0.6219 | 0.5570 | 0.084* | |
C21 | 0.5505 (4) | 0.63778 (15) | 0.7284 (4) | 0.0742 (11) | |
H21 | 0.5715 | 0.6743 | 0.7198 | 0.089* | |
C22 | 0.5730 (4) | 0.61527 (15) | 0.8390 (4) | 0.0724 (11) | |
H22 | 0.6086 | 0.6368 | 0.9048 | 0.087* | |
C23 | 0.5434 (4) | 0.56148 (13) | 0.8531 (3) | 0.0552 (8) | |
H23 | 0.5591 | 0.5462 | 0.9278 | 0.066* | |
C24 | 0.2234 (4) | 0.37141 (13) | 0.8606 (3) | 0.0521 (8) | |
O2 | 0.2516 (3) | 0.31823 (10) | 0.8546 (3) | 0.0856 (9) | |
C25 | 0.1581 (6) | 0.27977 (19) | 0.8952 (5) | 0.1149 (18) | |
H25A | 0.1402 | 0.2486 | 0.8429 | 0.138* | 0.836 (10) |
H25B | 0.0679 | 0.2971 | 0.8938 | 0.138* | 0.836 (10) |
H25C | 0.1139 | 0.2972 | 0.9517 | 0.138* | 0.164 (10) |
H25D | 0.2123 | 0.2488 | 0.9332 | 0.138* | 0.164 (10) |
C26 | 0.2260 (11) | 0.2612 (4) | 1.0182 (5) | 0.212 (5) | 0.836 (10) |
H26A | 0.3246 | 0.2534 | 1.0244 | 0.317* | 0.836 (10) |
H26B | 0.1791 | 0.2289 | 1.0357 | 0.317* | 0.836 (10) |
H26C | 0.2175 | 0.2893 | 1.0730 | 0.317* | 0.836 (10) |
C26' | 0.035 (2) | 0.2639 (11) | 0.7926 (17) | 0.117 (16) | 0.164 (10) |
H26D | −0.0306 | 0.2937 | 0.7743 | 0.175* | 0.164 (10) |
H26E | −0.0127 | 0.2326 | 0.8140 | 0.175* | 0.164 (10) |
H26F | 0.0711 | 0.2554 | 0.7251 | 0.175* | 0.164 (10) |
Cl1 | 0.28382 (14) | 0.79686 (4) | 0.88166 (13) | 0.0998 (4) | |
F1 | 0.1395 (3) | 0.35853 (9) | 0.36600 (19) | 0.0894 (8) | |
N1 | 0.2212 (4) | 0.71815 (12) | 1.0114 (3) | 0.0754 (9) | |
N2 | 0.0652 (3) | 0.53743 (10) | 0.8866 (2) | 0.0424 (6) | |
N3 | 0.0259 (3) | 0.47731 (11) | 0.7322 (2) | 0.0455 (6) | |
N4 | 0.2593 (2) | 0.50043 (10) | 0.8382 (2) | 0.0430 (6) | |
N5 | 0.4550 (2) | 0.47396 (10) | 0.76883 (18) | 0.0393 (6) | |
O1 | 0.1278 (3) | 0.38916 (9) | 0.8991 (2) | 0.0607 (6) | |
S1 | 0.46244 (9) | 0.37121 (3) | 0.76844 (7) | 0.0518 (3) | |
S2 | 0.67662 (9) | 0.43702 (4) | 0.68492 (7) | 0.0546 (3) | |
H3A | −0.059 (4) | 0.4739 (14) | 0.742 (3) | 0.066* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.063 (2) | 0.0369 (19) | 0.099 (3) | −0.0057 (16) | 0.029 (2) | −0.0006 (19) |
C2 | 0.104 (3) | 0.050 (2) | 0.083 (3) | −0.002 (2) | 0.048 (2) | 0.0081 (19) |
C3 | 0.101 (3) | 0.045 (2) | 0.069 (2) | −0.0017 (19) | 0.039 (2) | −0.0037 (17) |
C4 | 0.0437 (18) | 0.0404 (17) | 0.0499 (16) | 0.0029 (14) | 0.0146 (13) | −0.0015 (14) |
C5 | 0.088 (3) | 0.049 (2) | 0.064 (2) | −0.0016 (19) | 0.029 (2) | −0.0085 (17) |
C6 | 0.056 (2) | 0.0412 (18) | 0.0461 (16) | 0.0055 (14) | 0.0157 (14) | −0.0039 (13) |
C7 | 0.051 (2) | 0.0468 (19) | 0.0588 (18) | 0.0063 (15) | 0.0255 (15) | −0.0028 (15) |
C8 | 0.0443 (18) | 0.0302 (15) | 0.0449 (15) | −0.0002 (13) | 0.0180 (13) | 0.0039 (12) |
C9 | 0.0364 (16) | 0.0434 (18) | 0.0443 (15) | 0.0054 (13) | 0.0112 (13) | −0.0021 (13) |
C10 | 0.054 (2) | 0.047 (2) | 0.0597 (19) | −0.0017 (15) | 0.0237 (16) | −0.0079 (15) |
C11 | 0.078 (3) | 0.046 (2) | 0.066 (2) | −0.0057 (18) | 0.0252 (19) | −0.0135 (17) |
C12 | 0.079 (3) | 0.056 (2) | 0.0527 (18) | 0.0077 (19) | 0.0290 (18) | −0.0054 (16) |
C13 | 0.060 (2) | 0.058 (2) | 0.0489 (18) | 0.0070 (17) | 0.0218 (15) | 0.0046 (16) |
C14 | 0.0454 (18) | 0.0449 (18) | 0.0448 (16) | −0.0003 (14) | 0.0097 (13) | 0.0005 (13) |
C15 | 0.0347 (16) | 0.0417 (17) | 0.0397 (14) | 0.0008 (13) | 0.0111 (12) | −0.0006 (12) |
C16 | 0.0415 (17) | 0.0391 (18) | 0.0531 (17) | 0.0044 (13) | 0.0170 (14) | 0.0012 (13) |
C17 | 0.0366 (17) | 0.0481 (19) | 0.0443 (16) | 0.0017 (13) | 0.0074 (13) | −0.0041 (13) |
C18 | 0.0306 (15) | 0.0418 (17) | 0.0506 (16) | 0.0011 (13) | 0.0108 (12) | 0.0004 (13) |
C19 | 0.056 (2) | 0.053 (2) | 0.0541 (19) | −0.0043 (16) | 0.0184 (15) | 0.0009 (15) |
C20 | 0.075 (3) | 0.059 (2) | 0.078 (2) | −0.008 (2) | 0.023 (2) | 0.018 (2) |
C21 | 0.073 (3) | 0.044 (2) | 0.109 (3) | −0.0100 (19) | 0.028 (2) | 0.010 (2) |
C22 | 0.073 (3) | 0.053 (2) | 0.083 (3) | −0.0132 (19) | 0.003 (2) | −0.012 (2) |
C23 | 0.056 (2) | 0.049 (2) | 0.0568 (19) | −0.0060 (16) | 0.0055 (16) | −0.0004 (15) |
C24 | 0.054 (2) | 0.0437 (19) | 0.0623 (19) | −0.0003 (16) | 0.0217 (16) | 0.0017 (15) |
O2 | 0.091 (2) | 0.0373 (14) | 0.146 (2) | −0.0028 (13) | 0.0641 (18) | 0.0081 (15) |
C25 | 0.124 (4) | 0.053 (3) | 0.191 (5) | −0.012 (3) | 0.083 (4) | 0.011 (3) |
C26 | 0.273 (9) | 0.201 (8) | 0.157 (7) | −0.137 (7) | 0.041 (6) | 0.024 (6) |
C26' | 0.17 (4) | 0.070 (19) | 0.09 (2) | −0.04 (2) | −0.01 (2) | 0.040 (15) |
Cl1 | 0.1111 (10) | 0.0425 (6) | 0.1552 (11) | −0.0098 (6) | 0.0502 (8) | 0.0038 (6) |
F1 | 0.136 (2) | 0.0720 (15) | 0.0778 (14) | 0.0048 (14) | 0.0615 (15) | −0.0188 (12) |
N1 | 0.100 (3) | 0.0414 (18) | 0.087 (2) | −0.0051 (17) | 0.0263 (19) | −0.0152 (16) |
N2 | 0.0427 (15) | 0.0378 (14) | 0.0498 (13) | 0.0029 (11) | 0.0170 (11) | −0.0048 (11) |
N3 | 0.0374 (15) | 0.0499 (16) | 0.0529 (14) | −0.0005 (12) | 0.0179 (12) | −0.0109 (12) |
N4 | 0.0394 (15) | 0.0388 (14) | 0.0532 (14) | −0.0004 (11) | 0.0155 (11) | −0.0074 (11) |
N5 | 0.0359 (13) | 0.0388 (14) | 0.0428 (12) | 0.0002 (10) | 0.0086 (10) | −0.0020 (10) |
O1 | 0.0646 (16) | 0.0559 (15) | 0.0730 (15) | −0.0033 (12) | 0.0391 (13) | 0.0018 (11) |
S1 | 0.0492 (5) | 0.0393 (5) | 0.0713 (5) | 0.0058 (4) | 0.0232 (4) | −0.0017 (4) |
S2 | 0.0431 (5) | 0.0595 (6) | 0.0667 (5) | −0.0006 (4) | 0.0237 (4) | −0.0088 (4) |
C1—N1 | 1.325 (5) | C15—N5 | 1.401 (3) |
C1—C2 | 1.372 (5) | C16—C24 | 1.457 (4) |
C1—Cl1 | 1.746 (4) | C16—S1 | 1.736 (3) |
C2—C3 | 1.379 (5) | C17—N5 | 1.373 (4) |
C2—H2 | 0.9300 | C17—S2 | 1.664 (3) |
C3—C4 | 1.376 (4) | C17—S1 | 1.712 (3) |
C3—H3 | 0.9300 | C18—C19 | 1.373 (4) |
C4—C5 | 1.370 (4) | C18—C23 | 1.381 (4) |
C4—C6 | 1.509 (4) | C18—N5 | 1.444 (4) |
C5—N1 | 1.334 (4) | C19—C20 | 1.375 (5) |
C5—H5 | 0.9300 | C19—H19 | 0.9300 |
C6—N2 | 1.452 (4) | C20—C21 | 1.364 (5) |
C6—H6A | 0.9700 | C20—H20 | 0.9300 |
C6—H6B | 0.9700 | C21—C22 | 1.377 (5) |
C7—N2 | 1.455 (4) | C21—H21 | 0.9300 |
C7—H7A | 0.9600 | C22—C23 | 1.370 (5) |
C7—H7B | 0.9600 | C22—H22 | 0.9300 |
C7—H7C | 0.9600 | C23—H23 | 0.9300 |
C8—N4 | 1.304 (4) | C24—O1 | 1.204 (4) |
C8—N3 | 1.354 (4) | C24—O2 | 1.340 (4) |
C8—N2 | 1.359 (3) | O2—C25 | 1.464 (4) |
C9—C10 | 1.374 (4) | C25—C26 | 1.506 (6) |
C9—C14 | 1.383 (4) | C25—C26' | 1.529 (9) |
C9—N3 | 1.424 (4) | C25—H25A | 0.9700 |
C10—C11 | 1.391 (4) | C25—H25B | 0.9700 |
C10—H10 | 0.9300 | C25—H25C | 0.9700 |
C11—C12 | 1.364 (5) | C25—H25D | 0.9700 |
C11—H11 | 0.9300 | C26—H26A | 0.9600 |
C12—C13 | 1.361 (5) | C26—H26B | 0.9600 |
C12—F1 | 1.363 (3) | C26—H26C | 0.9600 |
C13—C14 | 1.381 (4) | C26'—H26D | 0.9600 |
C13—H13 | 0.9300 | C26'—H26E | 0.9600 |
C14—H14 | 0.9300 | C26'—H26F | 0.9600 |
C15—N4 | 1.356 (3) | N3—H3A | 0.86 (3) |
C15—C16 | 1.371 (4) | ||
N1—C1—C2 | 124.9 (3) | C19—C20—H20 | 119.9 |
N1—C1—Cl1 | 116.3 (3) | C20—C21—C22 | 120.0 (3) |
C2—C1—Cl1 | 118.7 (3) | C20—C21—H21 | 120.0 |
C1—C2—C3 | 117.0 (3) | C22—C21—H21 | 120.0 |
C1—C2—H2 | 121.5 | C23—C22—C21 | 120.6 (3) |
C3—C2—H2 | 121.5 | C23—C22—H22 | 119.7 |
C4—C3—C2 | 120.5 (3) | C21—C22—H22 | 119.7 |
C4—C3—H3 | 119.8 | C22—C23—C18 | 118.8 (3) |
C2—C3—H3 | 119.8 | C22—C23—H23 | 120.6 |
C5—C4—C3 | 116.6 (3) | C18—C23—H23 | 120.6 |
C5—C4—C6 | 120.7 (3) | O1—C24—O2 | 123.9 (3) |
C3—C4—C6 | 122.7 (3) | O1—C24—C16 | 126.4 (3) |
N1—C5—C4 | 125.3 (3) | O2—C24—C16 | 109.7 (3) |
N1—C5—H5 | 117.3 | C24—O2—C25 | 117.5 (3) |
C4—C5—H5 | 117.3 | O2—C25—C26 | 110.1 (4) |
N2—C6—C4 | 113.7 (2) | O2—C25—C26' | 109.7 (6) |
N2—C6—H6A | 108.8 | C26—C25—C26' | 139.1 (7) |
C4—C6—H6A | 108.8 | O2—C25—H25A | 109.6 |
N2—C6—H6B | 108.8 | C26—C25—H25A | 109.6 |
C4—C6—H6B | 108.8 | C26'—C25—H25A | 46.7 |
H6A—C6—H6B | 107.7 | O2—C25—H25B | 109.6 |
N2—C7—H7A | 109.5 | C26—C25—H25B | 109.6 |
N2—C7—H7B | 109.5 | C26'—C25—H25B | 64.3 |
H7A—C7—H7B | 109.5 | H25A—C25—H25B | 108.2 |
N2—C7—H7C | 109.5 | O2—C25—H25C | 110.2 |
H7A—C7—H7C | 109.5 | C26—C25—H25C | 69.1 |
H7B—C7—H7C | 109.5 | C26'—C25—H25C | 105.1 |
N4—C8—N3 | 126.7 (3) | H25A—C25—H25C | 137.6 |
N4—C8—N2 | 117.6 (3) | H25B—C25—H25C | 43.4 |
N3—C8—N2 | 115.5 (3) | O2—C25—H25D | 110.2 |
C10—C9—C14 | 120.3 (3) | C26—C25—H25D | 42.0 |
C10—C9—N3 | 118.7 (3) | C26'—C25—H25D | 113.4 |
C14—C9—N3 | 121.0 (3) | H25A—C25—H25D | 70.5 |
C9—C10—C11 | 119.8 (3) | H25B—C25—H25D | 137.7 |
C9—C10—H10 | 120.1 | H25C—C25—H25D | 108.1 |
C11—C10—H10 | 120.1 | C25—C26—H25C | 38.0 |
C12—C11—C10 | 118.4 (3) | C25—C26—H25D | 39.6 |
C12—C11—H11 | 120.8 | H25C—C26—H25D | 75.8 |
C10—C11—H11 | 120.8 | C25—C26—H26A | 109.5 |
C13—C12—F1 | 118.9 (3) | H25C—C26—H26A | 139.1 |
C13—C12—C11 | 122.9 (3) | H25D—C26—H26A | 84.9 |
F1—C12—C11 | 118.2 (3) | C25—C26—H26B | 109.5 |
C12—C13—C14 | 118.5 (3) | H25C—C26—H26B | 106.4 |
C12—C13—H13 | 120.7 | H25D—C26—H26B | 90.2 |
C14—C13—H13 | 120.7 | C25—C26—H26C | 109.5 |
C13—C14—C9 | 120.0 (3) | H25C—C26—H26C | 75.5 |
C13—C14—H14 | 120.0 | H25D—C26—H26C | 148.8 |
C9—C14—H14 | 120.0 | C25—C26'—H26D | 109.5 |
N4—C15—C16 | 133.7 (3) | C25—C26'—H26E | 109.5 |
N4—C15—N5 | 115.2 (3) | H26D—C26'—H26E | 109.5 |
C16—C15—N5 | 111.0 (2) | C25—C26'—H26F | 109.5 |
C15—C16—C24 | 127.9 (3) | H26D—C26'—H26F | 109.5 |
C15—C16—S1 | 111.4 (2) | H26E—C26'—H26F | 109.5 |
C24—C16—S1 | 120.7 (2) | C1—N1—C5 | 115.6 (3) |
N5—C17—S2 | 127.1 (2) | C8—N2—C6 | 120.3 (2) |
N5—C17—S1 | 109.4 (2) | C8—N2—C7 | 123.6 (2) |
S2—C17—S1 | 123.53 (18) | C6—N2—C7 | 115.4 (2) |
C19—C18—C23 | 120.9 (3) | C8—N3—C9 | 126.4 (3) |
C19—C18—N5 | 120.1 (3) | C8—N3—H3A | 116 (2) |
C23—C18—N5 | 119.0 (3) | C9—N3—H3A | 116 (2) |
C18—C19—C20 | 119.4 (3) | C8—N4—C15 | 125.9 (2) |
C18—C19—H19 | 120.3 | C17—N5—C15 | 115.7 (2) |
C20—C19—H19 | 120.3 | C17—N5—C18 | 122.0 (2) |
C21—C20—C19 | 120.3 (3) | C15—N5—C18 | 122.2 (2) |
C21—C20—H20 | 119.9 | C17—S1—C16 | 92.42 (14) |
N1—C1—C2—C3 | −1.2 (7) | C16—C24—O2—C25 | −179.9 (3) |
Cl1—C1—C2—C3 | 179.3 (3) | C24—O2—C25—C26 | −99.3 (6) |
C1—C2—C3—C4 | 0.3 (6) | C24—O2—C25—C26' | 90.2 (15) |
C2—C3—C4—C5 | 0.7 (6) | C2—C1—N1—C5 | 0.9 (6) |
C2—C3—C4—C6 | −178.9 (4) | Cl1—C1—N1—C5 | −179.5 (3) |
C3—C4—C5—N1 | −1.0 (6) | C4—C5—N1—C1 | 0.2 (6) |
C6—C4—C5—N1 | 178.7 (4) | N4—C8—N2—C6 | −4.5 (4) |
C5—C4—C6—N2 | 140.5 (3) | N3—C8—N2—C6 | −180.0 (2) |
C3—C4—C6—N2 | −39.9 (4) | N4—C8—N2—C7 | 165.5 (3) |
C14—C9—C10—C11 | 0.8 (5) | N3—C8—N2—C7 | −9.9 (4) |
N3—C9—C10—C11 | 178.3 (3) | C4—C6—N2—C8 | 98.3 (3) |
C9—C10—C11—C12 | 2.1 (5) | C4—C6—N2—C7 | −72.6 (3) |
C10—C11—C12—C13 | −2.4 (6) | N4—C8—N3—C9 | −7.1 (5) |
C10—C11—C12—F1 | 177.2 (3) | N2—C8—N3—C9 | 167.9 (3) |
F1—C12—C13—C14 | −179.8 (3) | C10—C9—N3—C8 | 135.3 (3) |
C11—C12—C13—C14 | −0.2 (5) | C14—C9—N3—C8 | −47.2 (4) |
C12—C13—C14—C9 | 3.1 (5) | N3—C8—N4—C15 | −26.7 (4) |
C10—C9—C14—C13 | −3.4 (5) | N2—C8—N4—C15 | 158.4 (3) |
N3—C9—C14—C13 | 179.1 (3) | C16—C15—N4—C8 | −43.7 (5) |
N4—C15—C16—C24 | 1.6 (5) | N5—C15—N4—C8 | 142.1 (3) |
N5—C15—C16—C24 | 176.0 (3) | S2—C17—N5—C15 | 176.7 (2) |
N4—C15—C16—S1 | −177.2 (3) | S1—C17—N5—C15 | −2.4 (3) |
N5—C15—C16—S1 | −2.8 (3) | S2—C17—N5—C18 | −0.8 (4) |
C23—C18—C19—C20 | −0.3 (5) | S1—C17—N5—C18 | −179.93 (19) |
N5—C18—C19—C20 | 178.2 (3) | N4—C15—N5—C17 | 178.9 (2) |
C18—C19—C20—C21 | 0.5 (6) | C16—C15—N5—C17 | 3.4 (3) |
C19—C20—C21—C22 | −0.5 (6) | N4—C15—N5—C18 | −3.5 (4) |
C20—C21—C22—C23 | 0.4 (6) | C16—C15—N5—C18 | −179.0 (2) |
C21—C22—C23—C18 | −0.3 (6) | C19—C18—N5—C17 | 72.3 (4) |
C19—C18—C23—C22 | 0.3 (5) | C23—C18—N5—C17 | −109.1 (3) |
N5—C18—C23—C22 | −178.3 (3) | C19—C18—N5—C15 | −105.2 (3) |
C15—C16—C24—O1 | −0.9 (6) | C23—C18—N5—C15 | 73.5 (4) |
S1—C16—C24—O1 | 177.8 (3) | N5—C17—S1—C16 | 0.6 (2) |
C15—C16—C24—O2 | −179.7 (3) | S2—C17—S1—C16 | −178.58 (19) |
S1—C16—C24—O2 | −1.0 (4) | C15—C16—S1—C17 | 1.3 (2) |
O1—C24—O2—C25 | 1.3 (5) | C24—C16—S1—C17 | −177.5 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···S2i | 0.86 (3) | 2.65 (3) | 3.443 (3) | 153 (3) |
C7—H7B···O1ii | 0.96 | 2.51 | 3.282 (4) | 138 |
Symmetry codes: (i) x−1, y, z; (ii) −x, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C26H23ClFN5O2S2 |
Mr | 556.06 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 9.6931 (5), 24.5636 (12), 11.7095 (6) |
β (°) | 103.745 (1) |
V (Å3) | 2708.2 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.34 |
Crystal size (mm) | 0.20 × 0.10 × 0.06 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2001) |
Tmin, Tmax | 0.936, 0.980 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 23442, 5326, 3569 |
Rint | 0.097 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.061, 0.172, 1.00 |
No. of reflections | 5326 |
No. of parameters | 350 |
No. of restraints | 23 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.50, −0.40 |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···S2i | 0.86 (3) | 2.65 (3) | 3.443 (3) | 153 (3) |
C7—H7B···O1ii | 0.96 | 2.51 | 3.282 (4) | 138 |
Symmetry codes: (i) x−1, y, z; (ii) −x, −y+1, −z+2. |
Acknowledgements
We gratefully acknowledge financial support of this work by the National Natural Science Foundation of China (No. 31000867) and Key Projects in the National Science & Technology Pillar Program (No. 2011BAE06B04).
References
Bruker (2000). SMART, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Liang, Y., Fan, S., Mo, W. Y. & He, H. W. (2007). J. Fluorine Chem. 128, 879–884. Web of Science CSD CrossRef CAS Google Scholar
Sheldrick, G. M. (2001). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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Recently, we have developed a new and versatile annulation process, which proceeded smoothly under mild conditions via a tandem aza-wittig and cyclization reaction (Liang et al., 2007), to synthesize new thiazolo[4,5-d]pyrimidine derivatives with possible herbicidal activities. In this paper, we report the structure of the intermediate guanidine derivative, (I) (Fig. 1).
In the molecule of the title compound, (I), the mean plane of the guanidine system is nearly coplannar. The three aryl groups are roughly twisted from the central guanidine system, the dihedral being 58.94 (13)°(thiazole), 78.37 (17)° (pyridine) and 50.76 (15)° (p-fluorophenyl) respectively, and the thiazole ring is nearly planar with the ethyloxyacyl group. The crystal packing is stabilized by C—H···O and C—H···S hydrogen bonds (Table 1) and weak π-π stacking interactions [Cg1···Cg3i = 3.7702 (17) Å; symmetry code: (i) x, y, z]. The atom C26 was disorder.