organic compounds
2-Methylsulfanyl-9H-1,3,4-thiadiazolo[2,3-b]quinazolin-9-one
aDepartment of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, Riyadh 11451, Saudi Arabia, bDepartment of Organic Chemistry, Faculty of Pharmacy, Al-Azhar University, Cairo 11884, Egypt, cDepartment of Medicinal Chemistry, Faculty of Pharmacy, University of Mansoura, Mansoura 35516, Egypt, dDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia, and eChemistry Department, Faculty of Science, King Abdulaziz University, PO Box 80203 Jeddah, Saudi Arabia
*Correspondence e-mail: edward.tiekink@gmail.com
In the title compound, C10H7N3OS2, the 16 non-H atoms are almost planar (r.m.s. deviation = 0.037 Å) and the S-bound methyl group is syn to the ketone O atom. In the crystal, centrosymmetrically related molecules are connected by pairs of C—H⋯O interactions between the ketone O and methyl H atoms. The dimeric aggregates are connected into a linear supramolecular chain along the b axis via π–π interactions occurring between the five-membered and benzene rings [centroid–centroid distance = 3.6123 (9) Å]. The chains assemble into layers in the bc plane via S⋯S interactions involving the endocyclic S atoms [S⋯S = 3.4607 (6) and 3.4792 (6) Å].
Related literature
For recent studies on the synthesis and biological properties of quinazoline-4(3H)-one derivatives, see: El-Azab & ElTahir (2012); El-Azab et al. (2011). For the synthesis and anti-microbial activity of the title compound, see: El-Azab (2007).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2012); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536812026189/hb6843sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812026189/hb6843Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812026189/hb6843Isup3.cml
A mixture of 2-mercapto-5H-[1,3,4]thiadiazolo[2,3-b]quinazolin-5-one (470 mg, 2 mmol) and methyliodide (2.1 mmol) in acetone (10 ml) containing anhydrous potassium carbonate (300 mg) was stirred at room temperature for 12 h. The reaction mixture was filtered, the solvent removed under reduced pressure and the solid obtained was dried and recrystallized from ethanol. Yield 88%. 1H NMR (CDCl3): δ 8.42 (d, 1H, J = 7.5 Hz), 7.79 (t, 1H, J = 7.0 Hz), 7.63 (d, 1H, J = 8.0 Hz), 7.49 (t, 1H, J = 7.0 Hz), 2.84 (s, 3H) p.p.m.. 13C NMR (CDCl3): δ = 15.3, 118.9, 126.2, 127.6, 134.8, 147.2, 156.2, 157.1, 158.5 p.p.m..
Carbon-bound H-atoms were placed in calculated positions [C—H = 0.95 to 0.98 Å, Uiso(H) = 1.2–1.5Ueq(C)] and were included in the
in the riding model approximation.Quinazoline-4(3H)-one derivatives attract interest owing to their putative biological activity (El-Azab & ElTahir, 2012; El-Azab et al., 2011). The title compound, 2-(methylthio)-5H-[1,3,4]thiadiazolo[2,3-b]quinazolin-5-one (I), has been synthesized previously and evaluated for its anti-microbial activity (El-Azab, 2007). Herein, we describe its
determination.The 16 non-hydrogen atoms in (I), Fig. 1, are planar with the r.m.s. deviation being 0.037 Å. The maximum deviations from the least-squares plane are 0.068 (1) Å for the ketone-O1 atom and -0.065 (2) Å for the methyl-C10 atom. The S-bound methyl group is syn to the ketone-O1 atom.
In the crystal packing, centrosymmetrically related molecules are connected by C—H···O interactions between the ketone-O and methyl-H atoms, Table 1, via a 16-membered {···HCSCN2CO}2 synthon, Fig. 2. The dimeric aggregates are connected into a linear supramolecular chain along the b axis via π—π interactions occurring between the five-membered and benzene rings [inter-centroid distance = 3.6123 (9) Å, angle of inclination = 2.09 (7)° for x, 1 + y, z]. The chains assemble into layers in the bc plane via S···S interactions involving the endocyclic-S1 atoms whereby each S1 atom forms two such interactions [S1···S1i = 3.4607 (6) Å for i: 2 - x,2 - y,1 - z; and S1···S1ii = 3.4792 (6) Å for ii: 2 - x, 1 - y, 1 - z]. Layers stack along the a axis without specific interactions between them, Fig. 3.
For recent studies on the synthesis and biological properties of quinazoline-4(3H)-one derivatives, see: El-Azab & ElTahir (2012); El-Azab et al. (2011). For the synthesis and anti-microbial activity of the title compound, see: El-Azab (2007).
Data collection: CrysAlis PRO (Agilent, 2012); cell
CrysAlis PRO (Agilent, 2012); data reduction: CrysAlis PRO (Agilent, 2012); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).C10H7N3OS2 | F(000) = 512 |
Mr = 249.31 | Dx = 1.607 Mg m−3 |
Monoclinic, P21/c | Cu Kα radiation, λ = 1.54184 Å |
Hall symbol: -P 2ybc | Cell parameters from 2166 reflections |
a = 11.8193 (4) Å | θ = 3.7–76.5° |
b = 4.9841 (2) Å | µ = 4.53 mm−1 |
c = 17.4985 (6) Å | T = 100 K |
β = 91.453 (3)° | Prism, colourless |
V = 1030.48 (6) Å3 | 0.30 × 0.10 × 0.03 mm |
Z = 4 |
Agilent SuperNova Dual diffractometer with an Atlas detector | 2110 independent reflections |
Radiation source: SuperNova (Cu) X-ray Source | 1937 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.018 |
Detector resolution: 10.4041 pixels mm-1 | θmax = 76.7°, θmin = 3.7° |
ω scan | h = −12→14 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012) | k = −5→6 |
Tmin = 0.344, Tmax = 0.876 | l = −15→21 |
3781 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.029 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.082 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0457P)2 + 0.3686P] where P = (Fo2 + 2Fc2)/3 |
2110 reflections | (Δ/σ)max = 0.001 |
145 parameters | Δρmax = 0.36 e Å−3 |
0 restraints | Δρmin = −0.27 e Å−3 |
C10H7N3OS2 | V = 1030.48 (6) Å3 |
Mr = 249.31 | Z = 4 |
Monoclinic, P21/c | Cu Kα radiation |
a = 11.8193 (4) Å | µ = 4.53 mm−1 |
b = 4.9841 (2) Å | T = 100 K |
c = 17.4985 (6) Å | 0.30 × 0.10 × 0.03 mm |
β = 91.453 (3)° |
Agilent SuperNova Dual diffractometer with an Atlas detector | 2110 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012) | 1937 reflections with I > 2σ(I) |
Tmin = 0.344, Tmax = 0.876 | Rint = 0.018 |
3781 measured reflections |
R[F2 > 2σ(F2)] = 0.029 | 0 restraints |
wR(F2) = 0.082 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.36 e Å−3 |
2110 reflections | Δρmin = −0.27 e Å−3 |
145 parameters |
x | y | z | Uiso*/Ueq | ||
S1 | 0.90968 (3) | 0.75129 (8) | 0.46619 (2) | 0.01702 (12) | |
S2 | 0.76245 (3) | 1.12015 (8) | 0.55613 (2) | 0.01660 (12) | |
N1 | 0.90012 (11) | 0.3645 (3) | 0.35873 (8) | 0.0160 (3) | |
N2 | 0.72981 (11) | 0.5607 (3) | 0.40394 (7) | 0.0145 (3) | |
N3 | 0.68915 (11) | 0.7516 (3) | 0.45394 (7) | 0.0160 (3) | |
O1 | 0.55197 (9) | 0.4218 (3) | 0.36566 (7) | 0.0217 (3) | |
C1 | 0.65417 (13) | 0.4007 (3) | 0.36022 (9) | 0.0159 (3) | |
C2 | 0.71312 (13) | 0.2152 (3) | 0.31034 (9) | 0.0153 (3) | |
C3 | 0.64945 (13) | 0.0467 (4) | 0.26154 (9) | 0.0183 (3) | |
H3 | 0.5691 | 0.0533 | 0.2616 | 0.022* | |
C4 | 0.70332 (14) | −0.1282 (4) | 0.21351 (9) | 0.0196 (3) | |
H4 | 0.6602 | −0.2429 | 0.1806 | 0.024* | |
C5 | 0.82196 (14) | −0.1368 (3) | 0.21325 (9) | 0.0192 (3) | |
H5 | 0.8589 | −0.2560 | 0.1796 | 0.023* | |
C6 | 0.88539 (13) | 0.0261 (3) | 0.26135 (9) | 0.0179 (3) | |
H6 | 0.9657 | 0.0173 | 0.2609 | 0.021* | |
C7 | 0.83228 (13) | 0.2050 (3) | 0.31091 (9) | 0.0149 (3) | |
C8 | 0.84595 (12) | 0.5289 (3) | 0.40102 (8) | 0.0149 (3) | |
C9 | 0.77423 (13) | 0.8644 (3) | 0.48930 (9) | 0.0152 (3) | |
C10 | 0.61018 (14) | 1.1556 (4) | 0.55743 (10) | 0.0211 (3) | |
H10A | 0.5903 | 1.2965 | 0.5938 | 0.032* | |
H10B | 0.5762 | 0.9854 | 0.5730 | 0.032* | |
H10C | 0.5815 | 1.2041 | 0.5062 | 0.032* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.01263 (19) | 0.0180 (2) | 0.0204 (2) | −0.00013 (13) | −0.00028 (14) | −0.00389 (14) |
S2 | 0.0170 (2) | 0.0176 (2) | 0.0151 (2) | 0.00105 (14) | −0.00022 (14) | −0.00248 (14) |
N1 | 0.0136 (6) | 0.0176 (7) | 0.0167 (6) | 0.0001 (5) | 0.0003 (5) | −0.0019 (5) |
N2 | 0.0124 (6) | 0.0179 (7) | 0.0133 (6) | 0.0031 (5) | 0.0007 (5) | −0.0011 (5) |
N3 | 0.0161 (6) | 0.0180 (7) | 0.0139 (6) | 0.0031 (5) | 0.0001 (5) | −0.0018 (5) |
O1 | 0.0118 (5) | 0.0294 (7) | 0.0239 (6) | 0.0024 (5) | −0.0007 (4) | −0.0067 (5) |
C1 | 0.0148 (7) | 0.0191 (7) | 0.0138 (7) | 0.0014 (6) | −0.0011 (6) | −0.0006 (6) |
C2 | 0.0151 (7) | 0.0176 (7) | 0.0131 (7) | 0.0011 (6) | −0.0001 (5) | 0.0006 (6) |
C3 | 0.0146 (7) | 0.0227 (8) | 0.0176 (7) | 0.0013 (7) | −0.0018 (6) | −0.0009 (6) |
C4 | 0.0190 (8) | 0.0219 (8) | 0.0177 (8) | 0.0007 (6) | −0.0041 (6) | −0.0031 (6) |
C5 | 0.0204 (8) | 0.0207 (8) | 0.0166 (7) | 0.0037 (6) | 0.0012 (6) | −0.0032 (6) |
C6 | 0.0135 (7) | 0.0206 (8) | 0.0195 (7) | 0.0022 (6) | 0.0013 (6) | −0.0013 (6) |
C7 | 0.0149 (7) | 0.0160 (7) | 0.0139 (7) | −0.0004 (6) | 0.0001 (5) | 0.0017 (6) |
C8 | 0.0127 (7) | 0.0159 (7) | 0.0160 (7) | −0.0008 (6) | −0.0005 (5) | 0.0023 (6) |
C9 | 0.0155 (7) | 0.0160 (7) | 0.0141 (7) | 0.0019 (6) | 0.0005 (5) | 0.0014 (6) |
C10 | 0.0178 (7) | 0.0261 (9) | 0.0194 (8) | 0.0048 (7) | 0.0015 (6) | −0.0032 (7) |
S1—C8 | 1.7473 (16) | C2—C7 | 1.409 (2) |
S1—C9 | 1.7542 (16) | C3—C4 | 1.378 (2) |
S2—C9 | 1.7378 (16) | C3—H3 | 0.9500 |
S2—C10 | 1.8091 (17) | C4—C5 | 1.403 (2) |
N1—C8 | 1.286 (2) | C4—H4 | 0.9500 |
N1—C7 | 1.393 (2) | C5—C6 | 1.378 (2) |
N2—C8 | 1.3840 (18) | C5—H5 | 0.9500 |
N2—N3 | 1.3866 (18) | C6—C7 | 1.403 (2) |
N2—C1 | 1.409 (2) | C6—H6 | 0.9500 |
N3—C9 | 1.296 (2) | C10—H10A | 0.9800 |
O1—C1 | 1.2186 (19) | C10—H10B | 0.9800 |
C1—C2 | 1.461 (2) | C10—H10C | 0.9800 |
C2—C3 | 1.403 (2) | ||
C8—S1—C9 | 88.48 (7) | C6—C5—H5 | 119.7 |
C9—S2—C10 | 100.19 (8) | C4—C5—H5 | 119.7 |
C8—N1—C7 | 114.96 (13) | C5—C6—C7 | 120.47 (14) |
C8—N2—N3 | 117.51 (13) | C5—C6—H6 | 119.8 |
C8—N2—C1 | 122.09 (13) | C7—C6—H6 | 119.8 |
N3—N2—C1 | 120.37 (12) | N1—C7—C6 | 118.30 (14) |
C9—N3—N2 | 108.78 (13) | N1—C7—C2 | 122.93 (14) |
O1—C1—N2 | 121.69 (14) | C6—C7—C2 | 118.77 (14) |
O1—C1—C2 | 126.16 (15) | N1—C8—N2 | 127.10 (14) |
N2—C1—C2 | 112.15 (13) | N1—C8—S1 | 124.55 (12) |
C3—C2—C7 | 120.23 (14) | N2—C8—S1 | 108.35 (11) |
C3—C2—C1 | 119.08 (14) | N3—C9—S2 | 124.42 (12) |
C7—C2—C1 | 120.69 (14) | N3—C9—S1 | 116.88 (12) |
C4—C3—C2 | 120.06 (15) | S2—C9—S1 | 118.69 (9) |
C4—C3—H3 | 120.0 | S2—C10—H10A | 109.5 |
C2—C3—H3 | 120.0 | S2—C10—H10B | 109.5 |
C3—C4—C5 | 119.90 (15) | H10A—C10—H10B | 109.5 |
C3—C4—H4 | 120.0 | S2—C10—H10C | 109.5 |
C5—C4—H4 | 120.0 | H10A—C10—H10C | 109.5 |
C6—C5—C4 | 120.56 (15) | H10B—C10—H10C | 109.5 |
C8—N2—N3—C9 | −0.24 (19) | C3—C2—C7—N1 | −179.16 (15) |
C1—N2—N3—C9 | 177.60 (13) | C1—C2—C7—N1 | 0.9 (2) |
C8—N2—C1—O1 | 176.66 (15) | C3—C2—C7—C6 | 0.7 (2) |
N3—N2—C1—O1 | −1.1 (2) | C1—C2—C7—C6 | −179.20 (15) |
C8—N2—C1—C2 | −3.1 (2) | C7—N1—C8—N2 | 0.4 (2) |
N3—N2—C1—C2 | 179.13 (13) | C7—N1—C8—S1 | 179.87 (11) |
O1—C1—C2—C3 | 1.9 (3) | N3—N2—C8—N1 | −179.87 (15) |
N2—C1—C2—C3 | −178.30 (14) | C1—N2—C8—N1 | 2.3 (2) |
O1—C1—C2—C7 | −178.17 (16) | N3—N2—C8—S1 | 0.61 (17) |
N2—C1—C2—C7 | 1.6 (2) | C1—N2—C8—S1 | −177.18 (12) |
C7—C2—C3—C4 | −0.5 (2) | C9—S1—C8—N1 | 179.88 (15) |
C1—C2—C3—C4 | 179.44 (15) | C9—S1—C8—N2 | −0.59 (11) |
C2—C3—C4—C5 | −0.3 (3) | N2—N3—C9—S2 | 178.77 (11) |
C3—C4—C5—C6 | 0.8 (3) | N2—N3—C9—S1 | −0.27 (17) |
C4—C5—C6—C7 | −0.5 (3) | C10—S2—C9—N3 | 0.76 (16) |
C8—N1—C7—C6 | 178.13 (15) | C10—S2—C9—S1 | 179.79 (10) |
C8—N1—C7—C2 | −2.0 (2) | C8—S1—C9—N3 | 0.53 (13) |
C5—C6—C7—N1 | 179.67 (15) | C8—S1—C9—S2 | −178.57 (10) |
C5—C6—C7—C2 | −0.2 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
C10—H10A···O1i | 0.98 | 2.32 | 3.170 (2) | 145 |
Symmetry code: (i) −x+1, −y+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C10H7N3OS2 |
Mr | 249.31 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 11.8193 (4), 4.9841 (2), 17.4985 (6) |
β (°) | 91.453 (3) |
V (Å3) | 1030.48 (6) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 4.53 |
Crystal size (mm) | 0.30 × 0.10 × 0.03 |
Data collection | |
Diffractometer | Agilent SuperNova Dual diffractometer with an Atlas detector |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2012) |
Tmin, Tmax | 0.344, 0.876 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3781, 2110, 1937 |
Rint | 0.018 |
(sin θ/λ)max (Å−1) | 0.631 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.029, 0.082, 1.09 |
No. of reflections | 2110 |
No. of parameters | 145 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.36, −0.27 |
Computer programs: CrysAlis PRO (Agilent, 2012), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
C10—H10A···O1i | 0.98 | 2.32 | 3.170 (2) | 145 |
Symmetry code: (i) −x+1, −y+2, −z+1. |
Footnotes
‡Additional correspondence author, e-mail: adelazaba@yahoo.com.
Acknowledgements
We thank the Deanship of Scientific Research and the Research Center of the College of Pharmacy, King Saud University. We also thank the Ministry of Higher Education (Malaysia) for funding structural studies through the High-Impact Research scheme (UM.C/HIR/MOHE/SC/12).
References
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Quinazoline-4(3H)-one derivatives attract interest owing to their putative biological activity (El-Azab & ElTahir, 2012; El-Azab et al., 2011). The title compound, 2-(methylthio)-5H-[1,3,4]thiadiazolo[2,3-b]quinazolin-5-one (I), has been synthesized previously and evaluated for its anti-microbial activity (El-Azab, 2007). Herein, we describe its crystal structure determination.
The 16 non-hydrogen atoms in (I), Fig. 1, are planar with the r.m.s. deviation being 0.037 Å. The maximum deviations from the least-squares plane are 0.068 (1) Å for the ketone-O1 atom and -0.065 (2) Å for the methyl-C10 atom. The S-bound methyl group is syn to the ketone-O1 atom.
In the crystal packing, centrosymmetrically related molecules are connected by C—H···O interactions between the ketone-O and methyl-H atoms, Table 1, via a 16-membered {···HCSCN2CO}2 synthon, Fig. 2. The dimeric aggregates are connected into a linear supramolecular chain along the b axis via π—π interactions occurring between the five-membered and benzene rings [inter-centroid distance = 3.6123 (9) Å, angle of inclination = 2.09 (7)° for symmetry operation: x, 1 + y, z]. The chains assemble into layers in the bc plane via S···S interactions involving the endocyclic-S1 atoms whereby each S1 atom forms two such interactions [S1···S1i = 3.4607 (6) Å for symmetry operation i: 2 - x,2 - y,1 - z; and S1···S1ii = 3.4792 (6) Å for ii: 2 - x, 1 - y, 1 - z]. Layers stack along the a axis without specific interactions between them, Fig. 3.