organic compounds
N′-[(E)-4-Chlorobenzylidene]pyridine-4-carbohydrazide monohydrate
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bDepartment of Studies in Chemistry, Mangalore University, Mangalagangotri 574 199, India, and cDepartment of Chemistry, P.A. College of Engineering, Nadupadavu, Mangalore 574 153, India
*Correspondence e-mail: hkfun@usm.my
The 13H10ClN3O·H2O, consists of two crystallographically independent Schiff base molecules which exist in an E conformation with respect to the C=N double bond, and two independent water molecules. In the crystal, the Schiff base and water molecules are linked into a three-dimensional network via N—H⋯O, O—H⋯N, O—H⋯O and C—H⋯O hydrogen bonds. The crystal studied was a pseudo-merohedral twin with (101 0-10 00-1) and a component ratio of 0.792 (2):0.208 (2).
of the title compound, CRelated literature
For background to terphenyls, see: Naveenkumar et al. (2010); Chen (2006). For related structures, see: Fun, Quah, Shetty et al. (2012); Fun, Quah, Shyma et al. (2012). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536812029121/is5159sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812029121/is5159Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812029121/is5159Isup3.cml
A mixture of isoniazid (1.4 g, 0.01 mol) and 4-chlorobenzaldehyde (1.4 g, 0.01 mol) in 15 ml of absolute alcohol containing 2 drops of hydrochloric acid was refluxed for about 3 h. Upon cooling, the solid was separated and was filtered and recrystallized from DMF. The Schiff base compound was crystallized out as a hydrate by slow evaporation in DMF. M.P.: 489 K.
The N- and O-bound H atoms were located from a difference Fourier map. The O-bound H atoms were refined freely, whereas the N-bound H atoms were refined with a riding model with Uiso(H) = 1.5 Ueq(N) [O—H = 0.73 (7) to 0.89 (8) Å; N—H = 0.89 and 1.00 Å]. The remaining H atoms were positioned geometrically and were refined with a riding model with Uiso(H) = 1.2 Ueq(C). The crystal studied was a twin with 10 001 and BASF = 0.208 (2).
101 0The pharmaceutical importance of isoniazid and its various derivatives are well documented and also the crystal structures of its Schiff base derivatives have been reported (Naveenkumar et al., 2010; Chen, 2006). Hence, we report herein the synthesis and
of title compound. The Schiff base, N'-[(E)-(4-chlorophenyl)methylidene] pyridine-4-carbohydrazide, is synthesized by condensation of isoniazid with 4-chlorobenzaldehyde in absolute alcohol in presence of hydrochloric acid. The Schiff base crystallized out as a hydrate to form the title compound.The ═N3A and C7B═N3B double bonds. The pyridine rings (C1A/C2A/N1A/C3A/C4A/C5A & C1B/C2B/N1B/C3B/C4B/C5B) are approximately planar with maximum deviations of 0.016 (6) Å at atom C4A and 0.012 (5) Å at atom C6B. Bond lengths and angles are within the normal ranges and are comparable with the related structures (Fun, Quah, Shetty et al., 2012; Fun, Quah, Shyma et al., 2012).
of the Schiff base compound, (Fig. 1), consists of two crystallographically independent N'-[(E)-(4-chlorophenyl)methylidene]pyridine-4-carbohydrazide molecules and two water molecules. The Schiff base molecules exist in an E configuration with respect to the C7AIn the crystal packing (Fig. 2), the molecules are linked into a three-dimensional network via intermolecular N2A—H1NA···O1WA, N2B—H1NB···O1WB, O1WA—H1WA···N1A, O1WA—H2WA···O1B, O1WA—H2WA···N3B, O1WB—H2WB···O1A, C1A—H1AA···O1WA, C1A—H1AA···O1B, C7A—H7AA···O1WA, C1B—H1BA···O1WB, O1WB—H1WB···N1B and C1B—H1BA···O1A hydrogen bonds (Table 1).
For background to terphenyls, see: Naveenkumar et al. (2010); Chen (2006). For related structures, see: Fun, Quah, Shetty et al. (2012); Fun, Quah, Shyma et al. (2012). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, showing 50% probability displacement ellipsoids. | |
Fig. 2. The crystal packing of the title compound, viewed along the b axis. H atoms not involved in the intermolecular interactions (dashed lines) have been omitted for clarity. |
C13H10ClN3O·H2O | F(000) = 1152 |
Mr = 277.71 | Dx = 1.449 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 8764 reflections |
a = 14.1645 (7) Å | θ = 2.8–29.9° |
b = 14.6276 (7) Å | µ = 0.30 mm−1 |
c = 14.0817 (7) Å | T = 100 K |
β = 119.220 (2)° | Block, yellow |
V = 2546.4 (2) Å3 | 0.47 × 0.26 × 0.24 mm |
Z = 8 |
Bruker SMART APEXII CCD area-detector diffractometer | 4458 independent reflections |
Radiation source: fine-focus sealed tube | 3995 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.043 |
φ and ω scans | θmax = 25.0°, θmin = 1.4° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −16→16 |
Tmin = 0.871, Tmax = 0.931 | k = −17→13 |
20683 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.071 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.205 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.123P)2 + 5.736P] where P = (Fo2 + 2Fc2)/3 |
4458 reflections | (Δ/σ)max = 0.001 |
360 parameters | Δρmax = 0.80 e Å−3 |
0 restraints | Δρmin = −0.55 e Å−3 |
C13H10ClN3O·H2O | V = 2546.4 (2) Å3 |
Mr = 277.71 | Z = 8 |
Monoclinic, P21/c | Mo Kα radiation |
a = 14.1645 (7) Å | µ = 0.30 mm−1 |
b = 14.6276 (7) Å | T = 100 K |
c = 14.0817 (7) Å | 0.47 × 0.26 × 0.24 mm |
β = 119.220 (2)° |
Bruker SMART APEXII CCD area-detector diffractometer | 4458 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 3995 reflections with I > 2σ(I) |
Tmin = 0.871, Tmax = 0.931 | Rint = 0.043 |
20683 measured reflections |
R[F2 > 2σ(F2)] = 0.071 | 0 restraints |
wR(F2) = 0.205 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.80 e Å−3 |
4458 reflections | Δρmin = −0.55 e Å−3 |
360 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1A | 0.07219 (10) | 1.37835 (8) | 0.59204 (11) | 0.0295 (3) | |
O1A | 0.1241 (3) | 0.7654 (2) | 0.6526 (3) | 0.0223 (7) | |
N1A | 0.4094 (3) | 0.5253 (3) | 0.7583 (3) | 0.0237 (9) | |
H1NA | 0.3567 | 0.8519 | 0.7510 | 0.035* | |
N2A | 0.2758 (3) | 0.8520 (3) | 0.7089 (3) | 0.0191 (8) | |
H1NB | 0.1442 | 0.1632 | 0.8694 | 0.029* | |
N3A | 0.2166 (3) | 0.9323 (3) | 0.6802 (3) | 0.0206 (8) | |
C1A | 0.4010 (4) | 0.6845 (3) | 0.7977 (4) | 0.0222 (10) | |
H1AA | 0.4371 | 0.7375 | 0.8380 | 0.027* | |
C2A | 0.4562 (4) | 0.6018 (3) | 0.8149 (4) | 0.0247 (11) | |
H2AA | 0.5303 | 0.5994 | 0.8690 | 0.030* | |
C3A | 0.3042 (4) | 0.5298 (3) | 0.6855 (4) | 0.0233 (10) | |
H3AA | 0.2700 | 0.4761 | 0.6454 | 0.028* | |
C4A | 0.2420 (4) | 0.6080 (3) | 0.6647 (4) | 0.0228 (10) | |
H4AA | 0.1669 | 0.6073 | 0.6138 | 0.027* | |
C5A | 0.2924 (4) | 0.6874 (3) | 0.7204 (4) | 0.0188 (10) | |
C6A | 0.2226 (4) | 0.7718 (3) | 0.6916 (4) | 0.0179 (10) | |
C7A | 0.2727 (4) | 1.0055 (3) | 0.6964 (4) | 0.0213 (10) | |
H7AA | 0.3488 | 1.0011 | 0.7256 | 0.026* | |
C8A | 0.2212 (4) | 1.0954 (3) | 0.6706 (4) | 0.0208 (10) | |
C9A | 0.1071 (4) | 1.1091 (3) | 0.6206 (4) | 0.0225 (11) | |
H9AA | 0.0609 | 1.0574 | 0.6028 | 0.027* | |
C10A | 0.0632 (4) | 1.1930 (3) | 0.5980 (4) | 0.0230 (10) | |
H10A | −0.0130 | 1.2005 | 0.5646 | 0.028* | |
C11A | 0.1303 (4) | 1.2690 (3) | 0.6241 (4) | 0.0192 (10) | |
C12A | 0.2426 (4) | 1.2607 (3) | 0.6729 (4) | 0.0223 (10) | |
H12A | 0.2875 | 1.3132 | 0.6904 | 0.027* | |
C13A | 0.2864 (4) | 1.1740 (3) | 0.6951 (4) | 0.0220 (10) | |
H13A | 0.3627 | 1.1671 | 0.7278 | 0.026* | |
O1WA | 0.4993 (3) | 0.8952 (3) | 0.8295 (4) | 0.0354 (9) | |
Cl1B | 0.42027 (11) | −0.36679 (8) | 1.05982 (11) | 0.0290 (3) | |
O1B | 0.3756 (3) | 0.2301 (2) | 1.0041 (3) | 0.0270 (8) | |
N1B | 0.1149 (3) | 0.4890 (3) | 0.8468 (3) | 0.0241 (9) | |
N2B | 0.2152 (3) | 0.1541 (3) | 0.9120 (3) | 0.0188 (8) | |
N3B | 0.2689 (3) | 0.0713 (3) | 0.9449 (3) | 0.0225 (9) | |
C1B | 0.1096 (4) | 0.3298 (3) | 0.8844 (4) | 0.0210 (10) | |
H1BA | 0.0696 | 0.2791 | 0.8881 | 0.025* | |
C2B | 0.0618 (4) | 0.4152 (3) | 0.8538 (4) | 0.0211 (10) | |
H2BA | −0.0114 | 0.4220 | 0.8371 | 0.025* | |
C3B | 0.2179 (4) | 0.4770 (3) | 0.8718 (4) | 0.0231 (10) | |
H3BA | 0.2562 | 0.5286 | 0.8673 | 0.028* | |
C4B | 0.2721 (4) | 0.3956 (3) | 0.9034 (4) | 0.0225 (10) | |
H4BA | 0.3457 | 0.3915 | 0.9205 | 0.027* | |
C5B | 0.2176 (4) | 0.3195 (3) | 0.9099 (4) | 0.0192 (10) | |
C6B | 0.2767 (4) | 0.2306 (3) | 0.9467 (4) | 0.0179 (10) | |
C7B | 0.2105 (4) | −0.0009 (3) | 0.9066 (4) | 0.0214 (10) | |
H7BA | 0.1351 | 0.0042 | 0.8576 | 0.026* | |
C8B | 0.2620 (4) | −0.0915 (3) | 0.9397 (4) | 0.0213 (10) | |
C9B | 0.3751 (4) | −0.1005 (4) | 1.0003 (4) | 0.0273 (11) | |
H9BA | 0.4189 | −0.0473 | 1.0168 | 0.033* | |
C10B | 0.4230 (4) | −0.1829 (4) | 1.0357 (4) | 0.0258 (11) | |
H10B | 0.4995 | −0.1876 | 1.0767 | 0.031* | |
C11B | 0.3585 (4) | −0.2605 (3) | 1.0112 (4) | 0.0202 (10) | |
C12B | 0.2471 (4) | −0.2557 (3) | 0.9494 (4) | 0.0202 (10) | |
H12B | 0.2042 | −0.3095 | 0.9315 | 0.024* | |
C13B | 0.1991 (4) | −0.1706 (3) | 0.9140 (4) | 0.0219 (10) | |
H13B | 0.1226 | −0.1661 | 0.8719 | 0.026* | |
O1WB | 0.9892 (3) | 0.1399 (3) | 0.7853 (4) | 0.0367 (10) | |
H1WA | 0.520 (6) | 0.914 (5) | 0.783 (6) | 0.05 (2)* | |
H2WA | 0.551 (7) | 0.876 (6) | 0.890 (8) | 0.08 (3)* | |
H1WB | 0.960 (7) | 0.101 (6) | 0.739 (7) | 0.06 (3)* | |
H2WB | 0.955 (6) | 0.155 (5) | 0.808 (6) | 0.04 (2)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1A | 0.0284 (7) | 0.0147 (6) | 0.0418 (8) | 0.0036 (5) | 0.0143 (6) | −0.0003 (5) |
O1A | 0.0173 (16) | 0.0182 (18) | 0.0292 (18) | 0.0014 (13) | 0.0097 (14) | 0.0030 (14) |
N1A | 0.031 (2) | 0.017 (2) | 0.029 (2) | 0.0044 (17) | 0.0186 (19) | 0.0044 (17) |
N2A | 0.0169 (19) | 0.0136 (19) | 0.025 (2) | 0.0003 (16) | 0.0090 (17) | 0.0039 (16) |
N3A | 0.023 (2) | 0.014 (2) | 0.024 (2) | 0.0019 (16) | 0.0108 (17) | 0.0050 (16) |
C1A | 0.028 (3) | 0.015 (2) | 0.023 (2) | 0.000 (2) | 0.013 (2) | 0.0009 (19) |
C2A | 0.029 (3) | 0.020 (2) | 0.024 (2) | 0.008 (2) | 0.012 (2) | 0.004 (2) |
C3A | 0.028 (3) | 0.015 (2) | 0.032 (3) | 0.003 (2) | 0.018 (2) | 0.000 (2) |
C4A | 0.024 (3) | 0.018 (2) | 0.026 (3) | 0.003 (2) | 0.011 (2) | 0.002 (2) |
C5A | 0.021 (2) | 0.017 (2) | 0.023 (2) | 0.0025 (19) | 0.0151 (19) | 0.0068 (19) |
C6A | 0.020 (2) | 0.016 (2) | 0.019 (2) | 0.0012 (18) | 0.0097 (19) | 0.0030 (18) |
C7A | 0.020 (2) | 0.017 (2) | 0.024 (2) | 0.0002 (19) | 0.009 (2) | 0.004 (2) |
C8A | 0.031 (3) | 0.012 (2) | 0.021 (2) | −0.002 (2) | 0.014 (2) | −0.0017 (19) |
C9A | 0.036 (3) | 0.017 (2) | 0.016 (2) | −0.014 (2) | 0.013 (2) | −0.0015 (18) |
C10A | 0.023 (2) | 0.023 (3) | 0.024 (2) | −0.003 (2) | 0.012 (2) | −0.004 (2) |
C11A | 0.024 (2) | 0.014 (2) | 0.021 (2) | −0.0035 (18) | 0.013 (2) | −0.0058 (18) |
C12A | 0.025 (2) | 0.011 (2) | 0.030 (3) | −0.0074 (19) | 0.013 (2) | −0.0045 (19) |
C13A | 0.017 (2) | 0.018 (2) | 0.027 (2) | −0.0012 (19) | 0.007 (2) | 0.000 (2) |
O1WA | 0.0234 (19) | 0.034 (2) | 0.038 (2) | −0.0067 (17) | 0.0060 (18) | 0.0152 (18) |
Cl1B | 0.0340 (7) | 0.0176 (6) | 0.0350 (7) | 0.0075 (5) | 0.0164 (6) | 0.0055 (5) |
O1B | 0.0162 (17) | 0.024 (2) | 0.0332 (19) | 0.0029 (14) | 0.0061 (15) | 0.0080 (15) |
N1B | 0.029 (2) | 0.015 (2) | 0.026 (2) | 0.0047 (17) | 0.0112 (18) | 0.0035 (16) |
N2B | 0.0162 (19) | 0.0140 (19) | 0.022 (2) | 0.0025 (16) | 0.0062 (16) | 0.0010 (16) |
N3B | 0.023 (2) | 0.013 (2) | 0.031 (2) | 0.0042 (17) | 0.0123 (18) | −0.0022 (17) |
C1B | 0.025 (2) | 0.016 (2) | 0.022 (2) | 0.0002 (19) | 0.011 (2) | 0.0015 (19) |
C2B | 0.021 (2) | 0.015 (2) | 0.024 (2) | 0.0032 (19) | 0.009 (2) | 0.0004 (19) |
C3B | 0.025 (3) | 0.015 (2) | 0.028 (3) | −0.004 (2) | 0.011 (2) | 0.002 (2) |
C4B | 0.023 (2) | 0.017 (2) | 0.027 (2) | −0.002 (2) | 0.012 (2) | 0.000 (2) |
C5B | 0.019 (2) | 0.018 (2) | 0.019 (2) | 0.0040 (19) | 0.0082 (19) | 0.0029 (19) |
C6B | 0.022 (2) | 0.019 (3) | 0.015 (2) | 0.0032 (19) | 0.0102 (19) | 0.0037 (18) |
C7B | 0.023 (2) | 0.013 (2) | 0.027 (2) | 0.0012 (19) | 0.011 (2) | −0.0044 (19) |
C8B | 0.028 (3) | 0.015 (2) | 0.023 (2) | 0.002 (2) | 0.013 (2) | 0.0004 (19) |
C9B | 0.037 (3) | 0.021 (3) | 0.035 (3) | −0.012 (2) | 0.026 (2) | −0.012 (2) |
C10B | 0.018 (2) | 0.038 (3) | 0.021 (2) | 0.010 (2) | 0.008 (2) | 0.008 (2) |
C11B | 0.025 (2) | 0.016 (2) | 0.021 (2) | 0.006 (2) | 0.012 (2) | 0.0010 (18) |
C12B | 0.027 (2) | 0.011 (2) | 0.021 (2) | 0.002 (2) | 0.011 (2) | −0.0016 (18) |
C13B | 0.021 (2) | 0.020 (2) | 0.022 (2) | −0.003 (2) | 0.009 (2) | −0.003 (2) |
O1WB | 0.024 (2) | 0.031 (2) | 0.053 (3) | −0.0026 (17) | 0.017 (2) | −0.022 (2) |
Cl1A—C11A | 1.754 (5) | Cl1B—C11B | 1.751 (5) |
O1A—C6A | 1.228 (6) | O1B—C6B | 1.229 (6) |
N1A—C3A | 1.336 (7) | N1B—C3B | 1.335 (6) |
N1A—C2A | 1.345 (7) | N1B—C2B | 1.346 (6) |
N2A—C6A | 1.351 (6) | N2B—C6B | 1.355 (6) |
N2A—N3A | 1.385 (5) | N2B—N3B | 1.384 (5) |
N2A—H1NA | 1.0006 | N2B—H1NB | 0.8938 |
N3A—C7A | 1.286 (6) | N3B—C7B | 1.286 (6) |
C1A—C5A | 1.385 (7) | C1B—C2B | 1.386 (7) |
C1A—C2A | 1.396 (7) | C1B—C5B | 1.398 (7) |
C1A—H1AA | 0.9500 | C1B—H1BA | 0.9500 |
C2A—H2AA | 0.9500 | C2B—H2BA | 0.9500 |
C3A—C4A | 1.385 (7) | C3B—C4B | 1.368 (7) |
C3A—H3AA | 0.9500 | C3B—H3BA | 0.9500 |
C4A—C5A | 1.388 (7) | C4B—C5B | 1.384 (7) |
C4A—H4AA | 0.9500 | C4B—H4BA | 0.9500 |
C5A—C6A | 1.508 (6) | C5B—C6B | 1.495 (6) |
C7A—C8A | 1.460 (6) | C7B—C8B | 1.475 (7) |
C7A—H7AA | 0.9500 | C7B—H7BA | 0.9500 |
C8A—C13A | 1.408 (7) | C8B—C13B | 1.395 (7) |
C8A—C9A | 1.428 (7) | C8B—C9B | 1.405 (7) |
C9A—C10A | 1.342 (7) | C9B—C10B | 1.354 (8) |
C9A—H9AA | 0.9500 | C9B—H9BA | 0.9500 |
C10A—C11A | 1.390 (7) | C10B—C11B | 1.391 (7) |
C10A—H10A | 0.9500 | C10B—H10B | 0.9500 |
C11A—C12A | 1.396 (7) | C11B—C12B | 1.383 (7) |
C12A—C13A | 1.379 (7) | C12B—C13B | 1.389 (7) |
C12A—H12A | 0.9500 | C12B—H12B | 0.9500 |
C13A—H13A | 0.9500 | C13B—H13B | 0.9500 |
O1WA—H1WA | 0.89 (8) | O1WB—H1WB | 0.81 (9) |
O1WA—H2WA | 0.86 (9) | O1WB—H2WB | 0.73 (7) |
C3A—N1A—C2A | 117.1 (4) | C3B—N1B—C2B | 116.9 (4) |
C6A—N2A—N3A | 118.6 (4) | C6B—N2B—N3B | 116.8 (4) |
C6A—N2A—H1NA | 118.9 | C6B—N2B—H1NB | 115.7 |
N3A—N2A—H1NA | 121.9 | N3B—N2B—H1NB | 127.6 |
C7A—N3A—N2A | 114.9 (4) | C7B—N3B—N2B | 116.2 (4) |
C5A—C1A—C2A | 118.4 (5) | C2B—C1B—C5B | 119.0 (4) |
C5A—C1A—H1AA | 120.8 | C2B—C1B—H1BA | 120.5 |
C2A—C1A—H1AA | 120.8 | C5B—C1B—H1BA | 120.5 |
N1A—C2A—C1A | 123.1 (5) | N1B—C2B—C1B | 122.7 (4) |
N1A—C2A—H2AA | 118.5 | N1B—C2B—H2BA | 118.7 |
C1A—C2A—H2AA | 118.5 | C1B—C2B—H2BA | 118.7 |
N1A—C3A—C4A | 124.0 (5) | N1B—C3B—C4B | 124.6 (4) |
N1A—C3A—H3AA | 118.0 | N1B—C3B—H3BA | 117.7 |
C4A—C3A—H3AA | 118.0 | C4B—C3B—H3BA | 117.7 |
C3A—C4A—C5A | 118.2 (5) | C3B—C4B—C5B | 118.6 (4) |
C3A—C4A—H4AA | 120.9 | C3B—C4B—H4BA | 120.7 |
C5A—C4A—H4AA | 120.9 | C5B—C4B—H4BA | 120.7 |
C1A—C5A—C4A | 119.1 (4) | C4B—C5B—C1B | 118.2 (4) |
C1A—C5A—C6A | 124.6 (4) | C4B—C5B—C6B | 119.1 (4) |
C4A—C5A—C6A | 116.4 (4) | C1B—C5B—C6B | 122.7 (4) |
O1A—C6A—N2A | 123.9 (4) | O1B—C6B—N2B | 123.9 (4) |
O1A—C6A—C5A | 120.7 (4) | O1B—C6B—C5B | 120.0 (4) |
N2A—C6A—C5A | 115.3 (4) | N2B—C6B—C5B | 116.1 (4) |
N3A—C7A—C8A | 121.0 (4) | N3B—C7B—C8B | 119.2 (4) |
N3A—C7A—H7AA | 119.5 | N3B—C7B—H7BA | 120.4 |
C8A—C7A—H7AA | 119.5 | C8B—C7B—H7BA | 120.4 |
C13A—C8A—C9A | 117.1 (4) | C13B—C8B—C9B | 118.3 (5) |
C13A—C8A—C7A | 119.1 (4) | C13B—C8B—C7B | 120.5 (4) |
C9A—C8A—C7A | 123.8 (4) | C9B—C8B—C7B | 121.1 (4) |
C10A—C9A—C8A | 121.8 (4) | C10B—C9B—C8B | 121.6 (5) |
C10A—C9A—H9AA | 119.1 | C10B—C9B—H9BA | 119.2 |
C8A—C9A—H9AA | 119.1 | C8B—C9B—H9BA | 119.2 |
C9A—C10A—C11A | 119.4 (5) | C9B—C10B—C11B | 119.0 (4) |
C9A—C10A—H10A | 120.3 | C9B—C10B—H10B | 120.5 |
C11A—C10A—H10A | 120.3 | C11B—C10B—H10B | 120.5 |
C10A—C11A—C12A | 121.8 (4) | C12B—C11B—C10B | 121.6 (4) |
C10A—C11A—Cl1A | 119.1 (4) | C12B—C11B—Cl1B | 119.4 (4) |
C12A—C11A—Cl1A | 119.1 (3) | C10B—C11B—Cl1B | 119.1 (4) |
C13A—C12A—C11A | 118.1 (4) | C11B—C12B—C13B | 118.7 (4) |
C13A—C12A—H12A | 120.9 | C11B—C12B—H12B | 120.7 |
C11A—C12A—H12A | 120.9 | C13B—C12B—H12B | 120.7 |
C12A—C13A—C8A | 121.7 (4) | C12B—C13B—C8B | 120.7 (4) |
C12A—C13A—H13A | 119.1 | C12B—C13B—H13B | 119.6 |
C8A—C13A—H13A | 119.1 | C8B—C13B—H13B | 119.6 |
H1WA—O1WA—H2WA | 114 (8) | H1WB—O1WB—H2WB | 111 (8) |
C6A—N2A—N3A—C7A | −178.2 (4) | C6B—N2B—N3B—C7B | −176.3 (4) |
C3A—N1A—C2A—C1A | −2.4 (7) | C3B—N1B—C2B—C1B | −0.6 (7) |
C5A—C1A—C2A—N1A | 1.4 (7) | C5B—C1B—C2B—N1B | 0.4 (7) |
C2A—N1A—C3A—C4A | 0.6 (7) | C2B—N1B—C3B—C4B | 0.2 (7) |
N1A—C3A—C4A—C5A | 2.1 (7) | N1B—C3B—C4B—C5B | 0.3 (8) |
C2A—C1A—C5A—C4A | 1.3 (7) | C3B—C4B—C5B—C1B | −0.5 (7) |
C2A—C1A—C5A—C6A | −179.1 (4) | C3B—C4B—C5B—C6B | −178.7 (4) |
C3A—C4A—C5A—C1A | −3.0 (7) | C2B—C1B—C5B—C4B | 0.1 (7) |
C3A—C4A—C5A—C6A | 177.4 (4) | C2B—C1B—C5B—C6B | 178.2 (4) |
N3A—N2A—C6A—O1A | −0.6 (7) | N3B—N2B—C6B—O1B | 0.4 (7) |
N3A—N2A—C6A—C5A | 177.3 (4) | N3B—N2B—C6B—C5B | 179.6 (4) |
C1A—C5A—C6A—O1A | −155.3 (4) | C4B—C5B—C6B—O1B | 24.6 (7) |
C4A—C5A—C6A—O1A | 24.3 (6) | C1B—C5B—C6B—O1B | −153.5 (5) |
C1A—C5A—C6A—N2A | 26.7 (6) | C4B—C5B—C6B—N2B | −154.6 (4) |
C4A—C5A—C6A—N2A | −153.8 (4) | C1B—C5B—C6B—N2B | 27.3 (6) |
N2A—N3A—C7A—C8A | −179.6 (4) | N2B—N3B—C7B—C8B | −178.9 (4) |
N3A—C7A—C8A—C13A | 176.6 (4) | N3B—C7B—C8B—C13B | 169.7 (4) |
N3A—C7A—C8A—C9A | −3.9 (7) | N3B—C7B—C8B—C9B | −8.5 (7) |
C13A—C8A—C9A—C10A | −0.3 (7) | C13B—C8B—C9B—C10B | −1.5 (7) |
C7A—C8A—C9A—C10A | −179.8 (4) | C7B—C8B—C9B—C10B | 176.7 (4) |
C8A—C9A—C10A—C11A | −0.1 (7) | C8B—C9B—C10B—C11B | 0.1 (7) |
C9A—C10A—C11A—C12A | 0.2 (7) | C9B—C10B—C11B—C12B | 1.6 (7) |
C9A—C10A—C11A—Cl1A | 178.8 (4) | C9B—C10B—C11B—Cl1B | −178.5 (4) |
C10A—C11A—C12A—C13A | 0.1 (7) | C10B—C11B—C12B—C13B | −1.9 (7) |
Cl1A—C11A—C12A—C13A | −178.5 (4) | Cl1B—C11B—C12B—C13B | 178.2 (4) |
C11A—C12A—C13A—C8A | −0.5 (7) | C11B—C12B—C13B—C8B | 0.4 (7) |
C9A—C8A—C13A—C12A | 0.6 (7) | C9B—C8B—C13B—C12B | 1.2 (7) |
C7A—C8A—C13A—C12A | −179.9 (5) | C7B—C8B—C13B—C12B | −177.0 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2A—H1NA···O1WA | 1.00 | 1.88 | 2.838 (7) | 160 |
N2B—H1NB···O1WBi | 0.89 | 1.95 | 2.810 (7) | 161 |
O1WA—H1WA···N1Aii | 0.88 (9) | 2.14 (8) | 2.896 (7) | 144 (6) |
O1WA—H2WA···O1Biii | 0.86 (10) | 2.05 (9) | 2.817 (6) | 149 (9) |
O1WA—H2WA···N3Biii | 0.86 (10) | 2.59 (10) | 3.306 (6) | 142 (8) |
O1WB—H2WB···O1Aiv | 0.73 (9) | 2.19 (8) | 2.843 (6) | 150 (8) |
O1WB—H1WB···N1Biv | 0.81 (9) | 2.00 (9) | 2.798 (6) | 166 (11) |
C1A—H1AA···O1WA | 0.95 | 2.49 | 3.321 (6) | 146 |
C1A—H1AA···O1Biii | 0.95 | 2.54 | 3.277 (7) | 135 |
C7A—H7AA···O1WA | 0.95 | 2.46 | 3.247 (7) | 141 |
C1B—H1BA···O1WBi | 0.95 | 2.43 | 3.201 (7) | 138 |
C1B—H1BA···O1Av | 0.95 | 2.52 | 3.230 (8) | 131 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, y+1/2, −z+3/2; (iii) −x+1, −y+1, −z+2; (iv) −x+1, y−1/2, −z+3/2; (v) −x, y−1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C13H10ClN3O·H2O |
Mr | 277.71 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 14.1645 (7), 14.6276 (7), 14.0817 (7) |
β (°) | 119.220 (2) |
V (Å3) | 2546.4 (2) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.30 |
Crystal size (mm) | 0.47 × 0.26 × 0.24 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.871, 0.931 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 20683, 4458, 3995 |
Rint | 0.043 |
(sin θ/λ)max (Å−1) | 0.594 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.071, 0.205, 1.06 |
No. of reflections | 4458 |
No. of parameters | 360 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.80, −0.55 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N2A—H1NA···O1WA | 1.00 | 1.88 | 2.838 (7) | 160 |
N2B—H1NB···O1WBi | 0.89 | 1.95 | 2.810 (7) | 161 |
O1WA—H1WA···N1Aii | 0.88 (9) | 2.14 (8) | 2.896 (7) | 144 (6) |
O1WA—H2WA···O1Biii | 0.86 (10) | 2.05 (9) | 2.817 (6) | 149 (9) |
O1WA—H2WA···N3Biii | 0.86 (10) | 2.59 (10) | 3.306 (6) | 142 (8) |
O1WB—H2WB···O1Aiv | 0.73 (9) | 2.19 (8) | 2.843 (6) | 150 (8) |
O1WB—H1WB···N1Biv | 0.81 (9) | 2.00 (9) | 2.798 (6) | 166 (11) |
C1A—H1AA···O1WA | 0.95 | 2.49 | 3.321 (6) | 146 |
C1A—H1AA···O1Biii | 0.95 | 2.54 | 3.277 (7) | 135 |
C7A—H7AA···O1WA | 0.95 | 2.46 | 3.247 (7) | 141 |
C1B—H1BA···O1WBi | 0.95 | 2.43 | 3.201 (7) | 138 |
C1B—H1BA···O1Av | 0.95 | 2.52 | 3.230 (8) | 131 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, y+1/2, −z+3/2; (iii) −x+1, −y+1, −z+2; (iv) −x+1, y−1/2, −z+3/2; (v) −x, y−1/2, −z+3/2. |
Acknowledgements
HKF and WSL thank Universiti Sains Malaysia (USM) for the Research University Grant (1001/PFIZIK/811160). WSL also thanks the Malaysian Government and USM for the post as Research Officer under the Research University Grant (1001/PFIZIK/811160). BN thanks the UGC SAP for financial assistance for the purchase of chemicals. DNS thanks UGC–RFSMS scheme (under SAP-Phase1) for financial assistance and Mangalore University for research facilities.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The pharmaceutical importance of isoniazid and its various derivatives are well documented and also the crystal structures of its Schiff base derivatives have been reported (Naveenkumar et al., 2010; Chen, 2006). Hence, we report herein the synthesis and crystal structure of title compound. The Schiff base, N'-[(E)-(4-chlorophenyl)methylidene] pyridine-4-carbohydrazide, is synthesized by condensation of isoniazid with 4-chlorobenzaldehyde in absolute alcohol in presence of hydrochloric acid. The Schiff base crystallized out as a hydrate to form the title compound.
The asymmetric unit of the Schiff base compound, (Fig. 1), consists of two crystallographically independent N'-[(E)-(4-chlorophenyl)methylidene]pyridine-4-carbohydrazide molecules and two water molecules. The Schiff base molecules exist in an E configuration with respect to the C7A═N3A and C7B═N3B double bonds. The pyridine rings (C1A/C2A/N1A/C3A/C4A/C5A & C1B/C2B/N1B/C3B/C4B/C5B) are approximately planar with maximum deviations of 0.016 (6) Å at atom C4A and 0.012 (5) Å at atom C6B. Bond lengths and angles are within the normal ranges and are comparable with the related structures (Fun, Quah, Shetty et al., 2012; Fun, Quah, Shyma et al., 2012).
In the crystal packing (Fig. 2), the molecules are linked into a three-dimensional network via intermolecular N2A—H1NA···O1WA, N2B—H1NB···O1WB, O1WA—H1WA···N1A, O1WA—H2WA···O1B, O1WA—H2WA···N3B, O1WB—H2WB···O1A, C1A—H1AA···O1WA, C1A—H1AA···O1B, C7A—H7AA···O1WA, C1B—H1BA···O1WB, O1WB—H1WB···N1B and C1B—H1BA···O1A hydrogen bonds (Table 1).