organic compounds
Methyl 2-{N-[2-(2,4-dichlorophenoxy)acetyl]-4-[(4,6-dimethoxypyrimidin-2-yl)oxy]anilino}propanoate
aKey Laboratory of Pesticide and Chemical Biology, College of Chemistry, Central China Normal University, Wuhan 430079, People's Republic of China.
*Correspondence e-mail: he1208@mail.ccnu.edu.cn
In the title molecule, C24H23Cl2N3O7, the central benzene ring forms dihedral angles of 65.71 (1) and 44.42 (1)° with the pyrimidine ring and the terminal benzene ring, respectively. In the crystal, molecules are linked via C—H⋯O hydrogen bonds.
Related literature
For reference bond-length data, see: Allen et al. (1987). For the synthesis of 4-(4,6-dimethoxypyrimidin-2-yloxy)benzenamine, see: Jin et al. (2011). For biological properties of fungicides, see: Gozzo & Garlaschelli (1985).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON.
Supporting information
https://doi.org/10.1107/S1600536812025494/wn2477sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812025494/wn2477Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812025494/wn2477Isup3.cml
4-(4,6-Dimethoxypyrimidin-2-yloxy)benzenamine (Jin et al., 2011) (1 mmol) and methyl 2-chloropropanoate (1.2 mmol) were dissolved in 15 ml dimethylformamide, then 1 mmol K2CO3 was added with constant stirring. The temperature was maintained at 100 °C for 10 h. The reaction mixture was poured into water and extracted with ethyl acetate, dried with Na2SO4, then purified by
on silica gel with petroleum ether/ethyl acetate (4:1) to give the compound methyl 2-(N-(4-(4,6-dimethoxypyrimidin-2-yloxy)phenyl)amino)propanoate.To a mixture of methyl 2-(N-(4-(4,6-dimethoxypyrimidin-2-yloxy) phenyl)amino)propanoate (2 mmol) and triethylamine (2 mmol) in CH2Cl2 (20 ml), 2,4-dichlorophenoxyacetyl chloride (2 mmol) was added at 2–5 °C and the mixture was stirred for another 3 h, then washed with saturated sodium hydrogen carbonate solution and dried with Na2SO4. The residue was purified by
on silica gel with petroleum ether/ethyl acetate (3:1) to give the pure title compound as a white solid. Recrystallization from ethanol over a period of one week gave colourless crystals of the title compound.H atoms were geometrically positioned (Csp2—H = 0.93 Å, Cmethine—H = 0.98 Å, Cmethylene—H = 0.97 Å, Cmethyl—H = 0.96 Å) and refined as riding, with Uiso(H) = xUeq(C), where x = 1.5 for methyl H and 1.2 for all other H atoms.
N-acylalanine fungicides are mainly used in crop protection because of their systemic properties, with both curative and protective activity against fungal pathogens of the Peronosporales (Gozzo & Garlaschelli, 1985). The pyrimidinyl group is widely used in fungicides and drug
(Jin et al., 2011), so we have introduced the pyrimidinyl group into acylalanine derivatives in order to decrease resistance and increase activity.Here we report the
of the title compound (Fig.1). The bond lengths (Allen et al., 1987) and angles show normal values. The central benzene ring forms dihedral angles of 65.71 (1)° and 44.42 (1)° with the pyrimidinyl ring and the terminal benzene ring, respectively. The C9—H9···O4 intermolecular hydrogen bond plays an important role in determining the crystal structure.For reference bond-length data, see: Allen et al. (1987). For the synthesis of 4-(4,6-dimethoxypyrimidin-2-yloxy)benzenamine, see: Jin et al. (2011). For biological properties of fungicides, see: Gozzo & Garlaschelli (1985).
Data collection: SMART (Bruker, 2001); cell
SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus (Bruker, 2001); program(s) used to solve structure: SHELXS-97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL-97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON (Spek, 2009).C24H23Cl2N3O7 | Z = 2 |
Mr = 536.35 | F(000) = 556 |
Triclinic, P1 | Dx = 1.399 Mg m−3 |
a = 8.2438 (9) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.2405 (12) Å | Cell parameters from 5848 reflections |
c = 14.2502 (15) Å | θ = 2.4–27.7° |
α = 85.178 (2)° | µ = 0.30 mm−1 |
β = 78.702 (2)° | T = 298 K |
γ = 80.032 (2)° | Block, colourless |
V = 1273.6 (2) Å3 | 0.16 × 0.12 × 0.10 mm |
Bruker SMART APEX CCD area-detector diffractometer | 4390 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.050 |
Graphite monochromator | θmax = 28.3°, θmin = 1.8° |
phi and ω scans | h = −10→10 |
15581 measured reflections | k = −14→14 |
6204 independent reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.056 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.174 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0812P)2 + 0.2621P] where P = (Fo2 + 2Fc2)/3 |
6204 reflections | (Δ/σ)max < 0.001 |
329 parameters | Δρmax = 0.77 e Å−3 |
0 restraints | Δρmin = −0.35 e Å−3 |
C24H23Cl2N3O7 | γ = 80.032 (2)° |
Mr = 536.35 | V = 1273.6 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.2438 (9) Å | Mo Kα radiation |
b = 11.2405 (12) Å | µ = 0.30 mm−1 |
c = 14.2502 (15) Å | T = 298 K |
α = 85.178 (2)° | 0.16 × 0.12 × 0.10 mm |
β = 78.702 (2)° |
Bruker SMART APEX CCD area-detector diffractometer | 4390 reflections with I > 2σ(I) |
15581 measured reflections | Rint = 0.050 |
6204 independent reflections |
R[F2 > 2σ(F2)] = 0.056 | 0 restraints |
wR(F2) = 0.174 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.77 e Å−3 |
6204 reflections | Δρmin = −0.35 e Å−3 |
329 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | −0.1814 (4) | 0.1820 (3) | 0.55913 (16) | 0.0750 (7) | |
C2 | −0.1019 (5) | 0.0866 (3) | 0.60971 (18) | 0.0888 (9) | |
H2 | −0.1613 | 0.0343 | 0.6514 | 0.107* | |
C3 | 0.0693 (5) | 0.0735 (2) | 0.59483 (17) | 0.0809 (8) | |
C4 | 0.0665 (3) | 0.2312 (2) | 0.49075 (15) | 0.0619 (5) | |
C5 | −0.4294 (4) | 0.3007 (4) | 0.5202 (3) | 0.1131 (12) | |
H5A | −0.4154 | 0.3749 | 0.5442 | 0.170* | |
H5B | −0.5467 | 0.2964 | 0.5285 | 0.170* | |
H5C | −0.3805 | 0.2983 | 0.4533 | 0.170* | |
C6 | 0.3282 (7) | −0.0322 (4) | 0.6277 (3) | 0.1322 (16) | |
H6A | 0.3745 | −0.0543 | 0.5632 | 0.198* | |
H6B | 0.3690 | −0.0945 | 0.6716 | 0.198* | |
H6C | 0.3610 | 0.0426 | 0.6385 | 0.198* | |
C7 | 0.0948 (3) | 0.3856 (2) | 0.36520 (15) | 0.0582 (5) | |
C8 | 0.0267 (3) | 0.34724 (19) | 0.29442 (15) | 0.0576 (5) | |
H8 | 0.0106 | 0.2673 | 0.2953 | 0.069* | |
C9 | −0.0170 (3) | 0.42863 (18) | 0.22240 (14) | 0.0529 (5) | |
H9 | −0.0651 | 0.4042 | 0.1749 | 0.063* | |
C10 | 0.0107 (2) | 0.54753 (17) | 0.22072 (14) | 0.0508 (4) | |
C11 | 0.0755 (3) | 0.5849 (2) | 0.29330 (16) | 0.0621 (5) | |
H11 | 0.0911 | 0.6649 | 0.2932 | 0.075* | |
C12 | 0.1170 (3) | 0.5032 (2) | 0.36626 (16) | 0.0646 (6) | |
H12 | 0.1599 | 0.5281 | 0.4157 | 0.077* | |
C13 | 0.0662 (2) | 0.62200 (17) | 0.05341 (15) | 0.0512 (4) | |
C14 | 0.2208 (3) | 0.52456 (19) | 0.04013 (15) | 0.0557 (5) | |
H14A | 0.2863 | 0.5293 | 0.0889 | 0.067* | |
H14B | 0.1868 | 0.4454 | 0.0472 | 0.067* | |
C15 | 0.3997 (2) | 0.63889 (18) | −0.06993 (14) | 0.0522 (5) | |
C16 | 0.4732 (2) | 0.6621 (2) | −0.16498 (15) | 0.0564 (5) | |
C17 | 0.5604 (3) | 0.7573 (2) | −0.19099 (17) | 0.0650 (6) | |
H17 | 0.6083 | 0.7721 | −0.2547 | 0.078* | |
C18 | 0.5757 (3) | 0.8305 (2) | −0.1213 (2) | 0.0724 (7) | |
C19 | 0.5045 (3) | 0.8096 (2) | −0.0276 (2) | 0.0744 (6) | |
H19 | 0.5156 | 0.8594 | 0.0189 | 0.089* | |
C20 | 0.4161 (3) | 0.7144 (2) | −0.00201 (17) | 0.0644 (6) | |
H20 | 0.3672 | 0.7011 | 0.0617 | 0.077* | |
C21 | −0.1595 (3) | 0.7360 (2) | 0.1557 (2) | 0.0687 (6) | |
H21 | −0.2150 | 0.7427 | 0.1001 | 0.082* | |
C22 | −0.2918 (4) | 0.7281 (3) | 0.2402 (3) | 0.1095 (12) | |
H22A | −0.3292 | 0.6513 | 0.2438 | 0.164* | |
H22B | −0.3842 | 0.7919 | 0.2355 | 0.164* | |
H22C | −0.2486 | 0.7360 | 0.2969 | 0.164* | |
C23 | −0.0768 (3) | 0.84909 (18) | 0.14879 (15) | 0.0550 (5) | |
C24 | −0.1183 (4) | 1.0605 (2) | 0.1175 (2) | 0.0823 (8) | |
H24A | −0.0790 | 1.0730 | 0.1744 | 0.124* | |
H24B | −0.2063 | 1.1253 | 0.1070 | 0.124* | |
H24C | −0.0275 | 1.0584 | 0.0636 | 0.124* | |
Cl1 | 0.45524 (9) | 0.57030 (7) | −0.25189 (5) | 0.0857 (2) | |
Cl2 | 0.68469 (11) | 0.95120 (8) | −0.15360 (8) | 0.1130 (3) | |
N1 | −0.0971 (3) | 0.25673 (18) | 0.49818 (12) | 0.0639 (5) | |
N2 | 0.1583 (3) | 0.14535 (19) | 0.53514 (13) | 0.0715 (5) | |
N3 | −0.0284 (2) | 0.62954 (15) | 0.14216 (13) | 0.0542 (4) | |
O1 | −0.3482 (3) | 0.2002 (2) | 0.57170 (15) | 0.1022 (7) | |
O2 | 0.1513 (4) | −0.0183 (2) | 0.64236 (15) | 0.1119 (8) | |
O3 | 0.1632 (2) | 0.30374 (17) | 0.43166 (13) | 0.0761 (5) | |
O4 | 0.03226 (19) | 0.69051 (14) | −0.01316 (11) | 0.0641 (4) | |
O5 | 0.32022 (19) | 0.54002 (13) | −0.05232 (10) | 0.0600 (4) | |
O6 | −0.1820 (2) | 0.94630 (14) | 0.12870 (13) | 0.0702 (4) | |
O7 | 0.0634 (2) | 0.84994 (14) | 0.16004 (13) | 0.0695 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0984 (19) | 0.0862 (17) | 0.0475 (12) | −0.0416 (15) | −0.0091 (12) | 0.0017 (11) |
C2 | 0.137 (3) | 0.0818 (19) | 0.0513 (13) | −0.0444 (18) | −0.0113 (15) | 0.0159 (12) |
C3 | 0.131 (3) | 0.0653 (15) | 0.0478 (12) | −0.0171 (16) | −0.0222 (14) | 0.0056 (11) |
C4 | 0.0814 (16) | 0.0601 (13) | 0.0479 (11) | −0.0198 (11) | −0.0157 (10) | 0.0018 (9) |
C5 | 0.084 (2) | 0.147 (3) | 0.109 (3) | −0.036 (2) | −0.0128 (18) | 0.016 (2) |
C6 | 0.172 (4) | 0.110 (3) | 0.093 (2) | 0.044 (3) | −0.037 (3) | 0.011 (2) |
C7 | 0.0544 (11) | 0.0615 (13) | 0.0562 (11) | −0.0144 (9) | −0.0044 (9) | 0.0091 (9) |
C8 | 0.0619 (12) | 0.0471 (11) | 0.0625 (12) | −0.0166 (9) | −0.0049 (9) | 0.0055 (9) |
C9 | 0.0548 (11) | 0.0507 (11) | 0.0524 (10) | −0.0144 (9) | −0.0041 (8) | −0.0001 (8) |
C10 | 0.0508 (10) | 0.0454 (10) | 0.0512 (10) | −0.0091 (8) | 0.0024 (8) | 0.0015 (8) |
C11 | 0.0707 (14) | 0.0491 (11) | 0.0658 (13) | −0.0169 (10) | −0.0047 (10) | −0.0026 (10) |
C12 | 0.0714 (14) | 0.0676 (14) | 0.0577 (12) | −0.0214 (11) | −0.0097 (10) | −0.0045 (10) |
C13 | 0.0521 (10) | 0.0417 (10) | 0.0588 (11) | −0.0099 (8) | −0.0093 (8) | 0.0053 (8) |
C14 | 0.0563 (11) | 0.0481 (11) | 0.0544 (11) | −0.0052 (8) | 0.0018 (9) | 0.0098 (8) |
C15 | 0.0463 (10) | 0.0480 (10) | 0.0555 (11) | −0.0004 (8) | −0.0037 (8) | 0.0094 (8) |
C16 | 0.0437 (10) | 0.0631 (13) | 0.0553 (11) | −0.0009 (9) | −0.0026 (8) | 0.0052 (9) |
C17 | 0.0448 (11) | 0.0729 (15) | 0.0679 (13) | −0.0074 (10) | 0.0026 (9) | 0.0153 (11) |
C18 | 0.0541 (13) | 0.0674 (15) | 0.0905 (18) | −0.0168 (11) | 0.0003 (11) | 0.0081 (13) |
C19 | 0.0710 (15) | 0.0701 (15) | 0.0822 (16) | −0.0164 (12) | −0.0097 (12) | −0.0049 (13) |
C20 | 0.0667 (13) | 0.0620 (13) | 0.0588 (12) | −0.0073 (10) | −0.0039 (10) | 0.0059 (10) |
C21 | 0.0489 (11) | 0.0513 (12) | 0.0969 (17) | −0.0032 (9) | 0.0011 (11) | 0.0020 (11) |
C22 | 0.0783 (18) | 0.0708 (18) | 0.159 (3) | −0.0151 (14) | 0.0354 (19) | −0.0167 (19) |
C23 | 0.0559 (12) | 0.0469 (11) | 0.0537 (11) | −0.0005 (9) | −0.0002 (9) | 0.0059 (8) |
C24 | 0.0913 (18) | 0.0461 (12) | 0.0980 (19) | −0.0044 (12) | −0.0036 (14) | 0.0163 (12) |
Cl1 | 0.0820 (4) | 0.1117 (6) | 0.0616 (4) | −0.0311 (4) | 0.0092 (3) | −0.0140 (3) |
Cl2 | 0.1001 (6) | 0.0934 (6) | 0.1411 (8) | −0.0505 (5) | 0.0159 (5) | 0.0014 (5) |
N1 | 0.0801 (13) | 0.0671 (12) | 0.0487 (9) | −0.0268 (10) | −0.0111 (8) | 0.0028 (8) |
N2 | 0.1018 (16) | 0.0628 (12) | 0.0512 (10) | −0.0095 (11) | −0.0233 (10) | 0.0038 (9) |
N3 | 0.0520 (9) | 0.0426 (9) | 0.0618 (10) | −0.0045 (7) | −0.0012 (7) | 0.0035 (7) |
O1 | 0.0946 (15) | 0.137 (2) | 0.0777 (12) | −0.0521 (14) | −0.0042 (11) | 0.0191 (12) |
O2 | 0.174 (3) | 0.0830 (14) | 0.0698 (12) | −0.0018 (15) | −0.0302 (14) | 0.0235 (10) |
O3 | 0.0694 (10) | 0.0823 (12) | 0.0788 (11) | −0.0230 (9) | −0.0233 (8) | 0.0288 (9) |
O4 | 0.0676 (9) | 0.0551 (8) | 0.0673 (9) | −0.0059 (7) | −0.0180 (7) | 0.0156 (7) |
O5 | 0.0649 (9) | 0.0527 (8) | 0.0548 (8) | −0.0097 (7) | 0.0049 (6) | 0.0042 (6) |
O6 | 0.0625 (9) | 0.0498 (9) | 0.0895 (11) | 0.0002 (7) | −0.0083 (8) | 0.0141 (8) |
O7 | 0.0671 (10) | 0.0522 (9) | 0.0904 (12) | −0.0080 (7) | −0.0223 (8) | 0.0041 (8) |
C1—O1 | 1.334 (3) | C13—N3 | 1.350 (3) |
C1—N1 | 1.336 (3) | C13—C14 | 1.522 (3) |
C1—C2 | 1.382 (4) | C14—O5 | 1.423 (2) |
C2—C3 | 1.369 (4) | C14—H14A | 0.9700 |
C2—H2 | 0.9300 | C14—H14B | 0.9700 |
C3—N2 | 1.326 (4) | C15—O5 | 1.367 (2) |
C3—O2 | 1.342 (3) | C15—C20 | 1.380 (3) |
C4—N1 | 1.315 (3) | C15—C16 | 1.394 (3) |
C4—N2 | 1.317 (3) | C16—C17 | 1.376 (3) |
C4—O3 | 1.363 (3) | C16—Cl1 | 1.721 (2) |
C5—O1 | 1.433 (4) | C17—C18 | 1.379 (4) |
C5—H5A | 0.9600 | C17—H17 | 0.9300 |
C5—H5B | 0.9600 | C18—C19 | 1.368 (4) |
C5—H5C | 0.9600 | C18—Cl2 | 1.737 (2) |
C6—O2 | 1.415 (5) | C19—C20 | 1.381 (3) |
C6—H6A | 0.9600 | C19—H19 | 0.9300 |
C6—H6B | 0.9600 | C20—H20 | 0.9300 |
C6—H6C | 0.9600 | C21—N3 | 1.465 (3) |
C7—C12 | 1.368 (3) | C21—C22 | 1.466 (4) |
C7—C8 | 1.377 (3) | C21—C23 | 1.531 (3) |
C7—O3 | 1.395 (3) | C21—H21 | 0.9800 |
C8—C9 | 1.376 (3) | C22—H22A | 0.9600 |
C8—H8 | 0.9300 | C22—H22B | 0.9600 |
C9—C10 | 1.392 (3) | C22—H22C | 0.9600 |
C9—H9 | 0.9300 | C23—O7 | 1.199 (3) |
C10—C11 | 1.378 (3) | C23—O6 | 1.321 (2) |
C10—N3 | 1.439 (3) | C24—O6 | 1.454 (3) |
C11—C12 | 1.383 (3) | C24—H24A | 0.9600 |
C11—H11 | 0.9300 | C24—H24B | 0.9600 |
C12—H12 | 0.9300 | C24—H24C | 0.9600 |
C13—O4 | 1.216 (2) | ||
O1—C1—N1 | 118.8 (2) | H14A—C14—H14B | 108.1 |
O1—C1—C2 | 118.8 (2) | O5—C15—C20 | 125.74 (18) |
N1—C1—C2 | 122.4 (3) | O5—C15—C16 | 116.07 (19) |
C3—C2—C1 | 116.1 (2) | C20—C15—C16 | 118.2 (2) |
C3—C2—H2 | 121.9 | C17—C16—C15 | 121.3 (2) |
C1—C2—H2 | 121.9 | C17—C16—Cl1 | 119.07 (17) |
N2—C3—O2 | 118.4 (3) | C15—C16—Cl1 | 119.64 (17) |
N2—C3—C2 | 123.6 (2) | C16—C17—C18 | 119.1 (2) |
O2—C3—C2 | 118.0 (3) | C16—C17—H17 | 120.5 |
N1—C4—N2 | 130.0 (2) | C18—C17—H17 | 120.5 |
N1—C4—O3 | 118.5 (2) | C19—C18—C17 | 120.7 (2) |
N2—C4—O3 | 111.5 (2) | C19—C18—Cl2 | 119.9 (2) |
O1—C5—H5A | 109.5 | C17—C18—Cl2 | 119.39 (19) |
O1—C5—H5B | 109.5 | C18—C19—C20 | 120.0 (3) |
H5A—C5—H5B | 109.5 | C18—C19—H19 | 120.0 |
O1—C5—H5C | 109.5 | C20—C19—H19 | 120.0 |
H5A—C5—H5C | 109.5 | C15—C20—C19 | 120.8 (2) |
H5B—C5—H5C | 109.5 | C15—C20—H20 | 119.6 |
O2—C6—H6A | 109.5 | C19—C20—H20 | 119.6 |
O2—C6—H6B | 109.5 | N3—C21—C22 | 115.3 (2) |
H6A—C6—H6B | 109.5 | N3—C21—C23 | 108.87 (17) |
O2—C6—H6C | 109.5 | C22—C21—C23 | 114.0 (2) |
H6A—C6—H6C | 109.5 | N3—C21—H21 | 105.9 |
H6B—C6—H6C | 109.5 | C22—C21—H21 | 105.9 |
C12—C7—C8 | 121.4 (2) | C23—C21—H21 | 105.9 |
C12—C7—O3 | 116.8 (2) | C21—C22—H22A | 109.5 |
C8—C7—O3 | 121.4 (2) | C21—C22—H22B | 109.5 |
C9—C8—C7 | 119.2 (2) | H22A—C22—H22B | 109.5 |
C9—C8—H8 | 120.4 | C21—C22—H22C | 109.5 |
C7—C8—H8 | 120.4 | H22A—C22—H22C | 109.5 |
C8—C9—C10 | 119.9 (2) | H22B—C22—H22C | 109.5 |
C8—C9—H9 | 120.0 | O7—C23—O6 | 124.5 (2) |
C10—C9—H9 | 120.0 | O7—C23—C21 | 125.12 (18) |
C11—C10—C9 | 119.99 (19) | O6—C23—C21 | 110.36 (19) |
C11—C10—N3 | 121.04 (18) | O6—C24—H24A | 109.5 |
C9—C10—N3 | 118.97 (18) | O6—C24—H24B | 109.5 |
C10—C11—C12 | 119.8 (2) | H24A—C24—H24B | 109.5 |
C10—C11—H11 | 120.1 | O6—C24—H24C | 109.5 |
C12—C11—H11 | 120.1 | H24A—C24—H24C | 109.5 |
C7—C12—C11 | 119.6 (2) | H24B—C24—H24C | 109.5 |
C7—C12—H12 | 120.2 | C4—N1—C1 | 114.2 (2) |
C11—C12—H12 | 120.2 | C4—N2—C3 | 113.7 (2) |
O4—C13—N3 | 122.16 (19) | C13—N3—C10 | 122.15 (16) |
O4—C13—C14 | 120.86 (18) | C13—N3—C21 | 115.18 (17) |
N3—C13—C14 | 116.98 (17) | C10—N3—C21 | 122.20 (18) |
O5—C14—C13 | 110.13 (16) | C1—O1—C5 | 118.3 (2) |
O5—C14—H14A | 109.6 | C3—O2—C6 | 118.4 (3) |
C13—C14—H14A | 109.6 | C4—O3—C7 | 120.35 (18) |
O5—C14—H14B | 109.6 | C15—O5—C14 | 117.63 (16) |
C13—C14—H14B | 109.6 | C23—O6—C24 | 116.33 (18) |
O1—C1—C2—C3 | −179.1 (2) | N2—C4—N1—C1 | −1.4 (4) |
N1—C1—C2—C3 | 0.8 (4) | O3—C4—N1—C1 | −178.7 (2) |
C1—C2—C3—N2 | −0.8 (4) | O1—C1—N1—C4 | −179.9 (2) |
C1—C2—C3—O2 | −179.8 (2) | C2—C1—N1—C4 | 0.1 (3) |
C12—C7—C8—C9 | 1.1 (3) | N1—C4—N2—C3 | 1.4 (4) |
O3—C7—C8—C9 | −170.65 (19) | O3—C4—N2—C3 | 178.9 (2) |
C7—C8—C9—C10 | 1.3 (3) | O2—C3—N2—C4 | 178.8 (2) |
C8—C9—C10—C11 | −2.7 (3) | C2—C3—N2—C4 | −0.2 (4) |
C8—C9—C10—N3 | 176.97 (18) | O4—C13—N3—C10 | 179.28 (19) |
C9—C10—C11—C12 | 1.8 (3) | C14—C13—N3—C10 | −1.8 (3) |
N3—C10—C11—C12 | −177.89 (19) | O4—C13—N3—C21 | −8.4 (3) |
C8—C7—C12—C11 | −2.0 (3) | C14—C13—N3—C21 | 170.50 (19) |
O3—C7—C12—C11 | 170.1 (2) | C11—C10—N3—C13 | 107.0 (2) |
C10—C11—C12—C7 | 0.6 (3) | C9—C10—N3—C13 | −72.7 (3) |
O4—C13—C14—O5 | 7.9 (3) | C11—C10—N3—C21 | −64.8 (3) |
N3—C13—C14—O5 | −171.06 (18) | C9—C10—N3—C21 | 115.5 (2) |
O5—C15—C16—C17 | −178.33 (17) | C22—C21—N3—C13 | 162.8 (3) |
C20—C15—C16—C17 | 0.1 (3) | C23—C21—N3—C13 | −67.6 (3) |
O5—C15—C16—Cl1 | 1.7 (2) | C22—C21—N3—C10 | −24.9 (3) |
C20—C15—C16—Cl1 | −179.85 (16) | C23—C21—N3—C10 | 104.8 (2) |
C15—C16—C17—C18 | 0.4 (3) | N1—C1—O1—C5 | −1.0 (4) |
Cl1—C16—C17—C18 | −179.63 (18) | C2—C1—O1—C5 | 178.9 (3) |
C16—C17—C18—C19 | −0.4 (4) | N2—C3—O2—C6 | 1.2 (4) |
C16—C17—C18—Cl2 | −179.73 (16) | C2—C3—O2—C6 | −179.7 (3) |
C17—C18—C19—C20 | 0.0 (4) | N1—C4—O3—C7 | −14.1 (3) |
Cl2—C18—C19—C20 | 179.26 (19) | N2—C4—O3—C7 | 168.1 (2) |
O5—C15—C20—C19 | 177.7 (2) | C12—C7—O3—C4 | 127.6 (2) |
C16—C15—C20—C19 | −0.6 (3) | C8—C7—O3—C4 | −60.3 (3) |
C18—C19—C20—C15 | 0.6 (4) | C20—C15—O5—C14 | 11.7 (3) |
N3—C21—C23—O7 | −20.9 (3) | C16—C15—O5—C14 | −169.97 (17) |
C22—C21—C23—O7 | 109.4 (3) | C13—C14—O5—C15 | 68.7 (2) |
N3—C21—C23—O6 | 159.17 (19) | O7—C23—O6—C24 | 1.6 (3) |
C22—C21—C23—O6 | −70.5 (3) | C21—C23—O6—C24 | −178.4 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
C9—H9···O4i | 0.93 | 2.57 | 3.402 (3) | 150 |
Symmetry code: (i) −x, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C24H23Cl2N3O7 |
Mr | 536.35 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 8.2438 (9), 11.2405 (12), 14.2502 (15) |
α, β, γ (°) | 85.178 (2), 78.702 (2), 80.032 (2) |
V (Å3) | 1273.6 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.30 |
Crystal size (mm) | 0.16 × 0.12 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15581, 6204, 4390 |
Rint | 0.050 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.056, 0.174, 1.06 |
No. of reflections | 6204 |
No. of parameters | 329 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.77, −0.35 |
Computer programs: SMART (Bruker, 2001), SAINT-Plus (Bruker, 2001), SHELXS-97 (Sheldrick, 2008), SHELXL-97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C9—H9···O4i | 0.93 | 2.57 | 3.402 (3) | 149.8 |
Symmetry code: (i) −x, −y+1, −z. |
Acknowledgements
We gratefully acknowledge financial support of this work by the National Basic Research Program of China (2010CB126100) and the National Natural Science Foundation of China (Nos. 21172090 and 21002037). The research was supported in part by the PCSIRT (No. IRT0953) and the self-determined research funds of CCNU from the college's basic research and operation of MOE (No. CCNU10A01007).
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19. CSD CrossRef Web of Science Google Scholar
Bruker (2001). SMART and SAINT-Plus. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Gozzo, F. & Garlaschelli, L. (1985). Pestic. Sci. 16, 227–286. CrossRef Web of Science Google Scholar
Jin, C. F., Liang, Y. J., He, H. W. & Fu, L. W. (2011). Eur. J. Med. Chem. 46, 429–432. Web of Science CrossRef CAS PubMed Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
N-acylalanine fungicides are mainly used in crop protection because of their systemic properties, with both curative and protective activity against fungal pathogens of the Peronosporales (Gozzo & Garlaschelli, 1985). The pyrimidinyl group is widely used in fungicides and drug molecular design (Jin et al., 2011), so we have introduced the pyrimidinyl group into acylalanine derivatives in order to decrease resistance and increase activity.
Here we report the crystal structure of the title compound (Fig.1). The bond lengths (Allen et al., 1987) and angles show normal values. The central benzene ring forms dihedral angles of 65.71 (1)° and 44.42 (1)° with the pyrimidinyl ring and the terminal benzene ring, respectively. The C9—H9···O4 intermolecular hydrogen bond plays an important role in determining the crystal structure.