organic compounds
8-Methyl-2-oxo-4-(thiophen-2-yl)-1,2,5,6,7,8-hexahydroquinoline-3-carbonitrile
aChemistry Department, Faculty of Science, King Abdulaziz University, PO Box 80203, Jeddah, Saudi Arabia, bCenter of Excellence for Advanced Materials Research (CEAMR), King Abdulaziz University, PO Box 80203, Jeddah 21589, Saudi Arabia, and cDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
In the title compound, C15H14N2OS, the pyridinone ring in the fused-ring system is nearly planar (r.m.s. deviation = 0.011 Å) and the cyclohexene ring has a twisted half-boat conformation with the methylene C atom adjacent to the methine C atom deviating by 0.592 (7) Å from the plane defined by the remaining five atoms (r.m.s. deviation = 0.108 Å). The thienyl ring is disordered over two almost coplanar positions of opposite orientation in a 0.649 (4):0.351 (4) ratio, and forms dihedral angles of 51.4 (3) (major component) and 54.2 (3)°, respectively, with the pyridinone ring. In the crystal, inversion-related molecules associate via an eight-membered {⋯HNCO}2 synthon and these are linked into a linear supramolecular chain along the a axis by weak π–π interactions that occur between centrosymmetrically related pyridinone rings [centroid–centroid distance = 3.889 (2) Å].
Related literature
For background to the cardiotonic and anti-inflammatory properties of this class of compounds, see: Behit & Baraka (2005); Girgis et al. (2007). For a related structure, see: Asiri et al. (2011).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2012); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S160053681202836X/xu5572sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S160053681202836X/xu5572Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S160053681202836X/xu5572Isup3.cml
A mixture of the thiophene-2-carboxaldehyde (1.1 g, 0.01 M), 2-methylcyclohexanone (1.12 g, 0.01 M), ethyl cyanoacetate (1.1 g, 0.01 M) and ammonium acetate (6.2 g, 0.08 M) in absolute ethanol (50 ml) was refluxed for 6 h. The reaction mixture was allowed to cool. The formed precipitate was filtered, washed with water, dried and recrystallized from ethanol as yellow crystals, M. pt: 525–527 K. Yield: 72%.
Carbon-bound H-atoms were placed in calculated positions [C—H = 0.95–0.99 Å, Uiso(H) = 1.2–1.5Ueq(C)] and were included in the
in the riding model approximation. The N-bound H-atom was treated similarly with N—H = 0.88 Å and with Uiso(H) = 1.2Ueq(N). The thienyl ring is disordered over two positions [co-planar and opposite orientation] in a 0.649 (4):0.351 (4) ratio. Pairs of 1,2-related distances were restrained to within 0.01 Å of each other, and the rings were restrained to be within 0.01 Å of a plane. The anisotropic displacement parameters, restrained to be nearly isotropic, of the primed atoms were set to those of the unprimed ones. The maximum and minimum residual electron density peaks of 1.02 and -0.78 e Å-3, respectively, were located 0.14 Å and 0.39 Å from the C15' and C13 atoms, respectively.The title compound (I) is a member of a series of cyano-pyridinones that have been evaluated for their cardiotonic (Behit & Baraka, 2005) and anti-inflammatory (Girgis et al., (2007) properties. Herein, the crystal and molecular structures of (I) are described.
In (I), Fig. 1, the pyridyl ring in the fused ring system is planar [r.m.s. deviation = 0.011 Å] and the cyclohexene ring has a twisted half-boat conformation with the methylene-C3 atom lying -0.592 (7) Å above the plane defined by the remaining five atoms [r.m.s. deviation = 0.108 Å]. There are two orientations of the thienyl ring [co-planar, with a dihedral angle of 4.4 (4)°, and of opposite orientations] both of which are inclined with respect to the pyridyl ring, forming dihedral angles of 51.4 (3)° [major component] and 54.2 (3)°, respectively. The molecular structure of (I) resembles that found in a literature structure with the exception of the C2—C3 conformation which is fused to a benzene ring (Asiri et al., 2011).
The familiar eight-membered centrosymmetric amide {···HNCO}2 synthon is observed in the crystal packing, Table 1. These are connected into a linear supramolecular chain along the a axis by π—π interactions that occur between centrosymmetrically related pyridyl rings [inter-centroid distance = 3.889 (2) Å for 1 - x, 1 - y, 1 - z], Fig. 2. Chains assemble into layers in the ab plane and stack along the c axis being separated by hydrophobic interactions, Fig. 3.
For background to the cardiotonic and anti-inflammatory properties of this class of compounds, see: Behit & Baraka (2005); Girgis et al. (2007). For a related structure, see: Asiri et al. (2011).
Data collection: CrysAlis PRO (Agilent, 2012); cell
CrysAlis PRO (Agilent, 2012); data reduction: CrysAlis PRO (Agilent, 2012); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).C15H14N2OS | Z = 2 |
Mr = 270.34 | F(000) = 284 |
Triclinic, P1 | Dx = 1.362 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.6443 (3) Å | Cell parameters from 3729 reflections |
b = 9.6909 (5) Å | θ = 2.3–27.5° |
c = 9.9852 (5) Å | µ = 0.24 mm−1 |
α = 67.003 (5)° | T = 100 K |
β = 80.869 (4)° | Plate, yellow |
γ = 76.108 (4)° | 0.30 × 0.20 × 0.05 mm |
V = 659.26 (5) Å3 |
Agilent SuperNova Dual diffractometer with an Atlas detector | 3041 independent reflections |
Radiation source: SuperNova (Mo) X-ray Source | 2356 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.031 |
Detector resolution: 10.4041 pixels mm-1 | θmax = 27.6°, θmin = 2.3° |
ω scan | h = −9→9 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012) | k = −12→12 |
Tmin = 0.798, Tmax = 1.000 | l = −12→12 |
9707 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.088 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.230 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0899P)2 + 1.5187P] where P = (Fo2 + 2Fc2)/3 |
3041 reflections | (Δ/σ)max = 0.001 |
185 parameters | Δρmax = 1.02 e Å−3 |
33 restraints | Δρmin = −0.78 e Å−3 |
C15H14N2OS | γ = 76.108 (4)° |
Mr = 270.34 | V = 659.26 (5) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.6443 (3) Å | Mo Kα radiation |
b = 9.6909 (5) Å | µ = 0.24 mm−1 |
c = 9.9852 (5) Å | T = 100 K |
α = 67.003 (5)° | 0.30 × 0.20 × 0.05 mm |
β = 80.869 (4)° |
Agilent SuperNova Dual diffractometer with an Atlas detector | 3041 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012) | 2356 reflections with I > 2σ(I) |
Tmin = 0.798, Tmax = 1.000 | Rint = 0.031 |
9707 measured reflections |
R[F2 > 2σ(F2)] = 0.088 | 33 restraints |
wR(F2) = 0.230 | H-atom parameters constrained |
S = 1.07 | Δρmax = 1.02 e Å−3 |
3041 reflections | Δρmin = −0.78 e Å−3 |
185 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.8432 (4) | 0.6552 (5) | 0.4105 (4) | 0.0607 (13) | |
N1 | 0.7871 (4) | 0.4615 (4) | 0.6240 (4) | 0.0359 (9) | |
H1n | 0.8984 | 0.4118 | 0.6160 | 0.043* | |
N2 | 0.4540 (5) | 0.9325 (4) | 0.3270 (4) | 0.0359 (9) | |
C1 | 0.9207 (6) | 0.2563 (6) | 0.9181 (5) | 0.0405 (11) | |
H1A | 1.0051 | 0.3102 | 0.8423 | 0.061* | |
H1B | 0.9847 | 0.1546 | 0.9765 | 0.061* | |
H1C | 0.8702 | 0.3144 | 0.9813 | 0.061* | |
C2 | 0.7691 (5) | 0.2402 (5) | 0.8473 (4) | 0.0303 (9) | |
H2 | 0.8246 | 0.1755 | 0.7884 | 0.036* | |
C3 | 0.6307 (6) | 0.1585 (5) | 0.9600 (5) | 0.0337 (10) | |
H3A | 0.5668 | 0.1120 | 0.9147 | 0.040* | |
H3B | 0.6941 | 0.0752 | 1.0422 | 0.040* | |
C4 | 0.4947 (6) | 0.2674 (5) | 1.0173 (5) | 0.0361 (10) | |
H4A | 0.5584 | 0.3154 | 1.0611 | 0.043* | |
H4B | 0.4121 | 0.2101 | 1.0945 | 0.043* | |
C5 | 0.3854 (5) | 0.3914 (5) | 0.8953 (4) | 0.0300 (9) | |
H5A | 0.3015 | 0.3458 | 0.8667 | 0.036* | |
H5B | 0.3120 | 0.4703 | 0.9318 | 0.036* | |
C6 | 0.5042 (5) | 0.4659 (4) | 0.7629 (4) | 0.0219 (7) | |
C7 | 0.6793 (5) | 0.3935 (4) | 0.7432 (4) | 0.0244 (8) | |
C8 | 0.7363 (5) | 0.6006 (5) | 0.5159 (5) | 0.0367 (11) | |
C9 | 0.5537 (5) | 0.6763 (4) | 0.5364 (4) | 0.0252 (8) | |
C10 | 0.4413 (5) | 0.6133 (4) | 0.6569 (4) | 0.0204 (7) | |
C11 | 0.4972 (5) | 0.8193 (5) | 0.4214 (4) | 0.0258 (8) | |
C12 | 0.2592 (5) | 0.7030 (4) | 0.6738 (4) | 0.0311 (9) | |
S1 | 0.0646 (2) | 0.6528 (2) | 0.7033 (2) | 0.0426 (7) | 0.649 (4) |
S1' | 0.2014 (7) | 0.8647 (5) | 0.6683 (4) | 0.043* | 0.351 (4) |
C13 | 0.260 (2) | 0.8772 (14) | 0.6570 (7) | 0.069 (4) | 0.649 (4) |
H13 | 0.3559 | 0.9306 | 0.6399 | 0.082* | 0.649 (4) |
C13' | 0.079 (2) | 0.627 (2) | 0.6905 (12) | 0.069* | 0.351 (4) |
H13' | 0.0714 | 0.5285 | 0.6971 | 0.082* | 0.351 (4) |
C14 | 0.0544 (12) | 0.9255 (9) | 0.6783 (8) | 0.0461 (18) | 0.649 (4) |
H14 | 0.0031 | 1.0261 | 0.6752 | 0.055* | 0.649 (4) |
C14' | −0.072 (2) | 0.7647 (18) | 0.6921 (14) | 0.046* | 0.351 (4) |
H14' | −0.1961 | 0.7600 | 0.6992 | 0.055* | 0.351 (4) |
C15 | −0.0505 (11) | 0.8293 (9) | 0.7006 (7) | 0.0432 (18) | 0.649 (4) |
H15 | −0.1783 | 0.8545 | 0.7141 | 0.052* | 0.649 (4) |
C15' | −0.0217 (15) | 0.8881 (17) | 0.6833 (11) | 0.043* | 0.351 (4) |
H15' | −0.1023 | 0.9788 | 0.6852 | 0.052* | 0.351 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0203 (15) | 0.071 (3) | 0.0354 (18) | 0.0116 (15) | 0.0094 (13) | 0.0234 (17) |
N1 | 0.0157 (15) | 0.041 (2) | 0.0255 (18) | 0.0083 (14) | 0.0040 (13) | 0.0050 (15) |
N2 | 0.0270 (18) | 0.035 (2) | 0.0275 (18) | 0.0013 (15) | −0.0005 (14) | 0.0029 (15) |
C1 | 0.026 (2) | 0.045 (3) | 0.031 (2) | −0.0043 (18) | −0.0045 (17) | 0.0055 (19) |
C2 | 0.026 (2) | 0.027 (2) | 0.025 (2) | 0.0028 (15) | −0.0006 (15) | −0.0016 (16) |
C3 | 0.031 (2) | 0.0230 (19) | 0.032 (2) | −0.0038 (16) | −0.0018 (17) | 0.0049 (16) |
C4 | 0.030 (2) | 0.034 (2) | 0.025 (2) | −0.0049 (17) | 0.0056 (16) | 0.0047 (17) |
C5 | 0.0189 (18) | 0.030 (2) | 0.029 (2) | −0.0054 (15) | 0.0050 (15) | 0.0000 (16) |
C6 | 0.0180 (17) | 0.0239 (18) | 0.0205 (17) | −0.0050 (13) | −0.0003 (13) | −0.0046 (14) |
C7 | 0.0197 (17) | 0.0267 (19) | 0.0202 (17) | −0.0022 (14) | 0.0012 (13) | −0.0039 (15) |
C8 | 0.0157 (18) | 0.045 (2) | 0.024 (2) | 0.0044 (16) | 0.0023 (14) | 0.0071 (18) |
C9 | 0.0174 (17) | 0.0285 (19) | 0.0209 (18) | −0.0013 (14) | −0.0021 (13) | −0.0013 (15) |
C10 | 0.0151 (16) | 0.0236 (17) | 0.0213 (17) | −0.0047 (13) | −0.0007 (13) | −0.0067 (14) |
C11 | 0.0164 (17) | 0.031 (2) | 0.0221 (18) | −0.0023 (14) | 0.0006 (13) | −0.0034 (16) |
C12 | 0.0238 (19) | 0.035 (2) | 0.0189 (18) | 0.0049 (16) | 0.0027 (14) | −0.0018 (16) |
S1 | 0.0090 (7) | 0.0483 (10) | 0.0447 (10) | −0.0033 (6) | −0.0002 (5) | 0.0084 (7) |
C13 | 0.069 (4) | 0.069 (4) | 0.068 (4) | −0.0132 (15) | −0.0044 (13) | −0.0250 (18) |
C14 | 0.046 (2) | 0.045 (2) | 0.043 (2) | −0.0018 (12) | 0.0006 (12) | −0.0171 (13) |
C15 | 0.040 (2) | 0.042 (2) | 0.041 (2) | −0.0030 (12) | 0.0010 (12) | −0.0128 (13) |
O1—C8 | 1.246 (5) | C6—C10 | 1.429 (5) |
N1—C7 | 1.366 (5) | C8—C9 | 1.436 (5) |
N1—C8 | 1.371 (5) | C9—C10 | 1.381 (5) |
N1—H1n | 0.8800 | C9—C11 | 1.433 (5) |
N2—C11 | 1.148 (5) | C10—C12 | 1.477 (5) |
C1—C2 | 1.516 (6) | C12—S1' | 1.503 (5) |
C1—H1A | 0.9800 | C12—S1 | 1.622 (4) |
C1—H1B | 0.9800 | C12—C13 | 1.632 (13) |
C1—H1C | 0.9800 | C12—C13' | 1.668 (17) |
C2—C7 | 1.513 (5) | S1—C15 | 1.717 (8) |
C2—C3 | 1.530 (5) | S1'—C15' | 1.656 (11) |
C2—H2 | 1.0000 | C13—C14 | 1.537 (15) |
C3—C4 | 1.510 (6) | C13—H13 | 0.9500 |
C3—H3A | 0.9900 | C13'—C14' | 1.541 (18) |
C3—H3B | 0.9900 | C13'—H13' | 0.9500 |
C4—C5 | 1.524 (6) | C14—C15 | 1.304 (12) |
C4—H4A | 0.9900 | C14—H14 | 0.9500 |
C4—H4B | 0.9900 | C14'—C15' | 1.309 (15) |
C5—C6 | 1.511 (5) | C14'—H14' | 0.9500 |
C5—H5A | 0.9900 | C15—H15 | 0.9500 |
C5—H5B | 0.9900 | C15'—H15' | 0.9500 |
C6—C7 | 1.377 (5) | ||
C7—N1—C8 | 125.4 (3) | O1—C8—N1 | 121.6 (4) |
C7—N1—H1n | 117.3 | O1—C8—C9 | 124.0 (4) |
C8—N1—H1n | 117.3 | N1—C8—C9 | 114.4 (3) |
C2—C1—H1A | 109.5 | C10—C9—C11 | 123.1 (3) |
C2—C1—H1B | 109.5 | C10—C9—C8 | 122.1 (3) |
H1A—C1—H1B | 109.5 | C11—C9—C8 | 114.9 (3) |
C2—C1—H1C | 109.5 | C9—C10—C6 | 119.8 (3) |
H1A—C1—H1C | 109.5 | C9—C10—C12 | 118.5 (3) |
H1B—C1—H1C | 109.5 | C6—C10—C12 | 121.7 (3) |
C7—C2—C1 | 111.3 (4) | N2—C11—C9 | 178.5 (4) |
C7—C2—C3 | 111.3 (3) | C10—C12—S1' | 130.3 (4) |
C1—C2—C3 | 112.2 (4) | C10—C12—S1 | 129.1 (3) |
C7—C2—H2 | 107.3 | S1'—C12—S1 | 100.5 (3) |
C1—C2—H2 | 107.3 | C10—C12—C13 | 113.3 (6) |
C3—C2—H2 | 107.3 | S1—C12—C13 | 117.5 (6) |
C4—C3—C2 | 111.4 (3) | C10—C12—C13' | 119.2 (8) |
C4—C3—H3A | 109.4 | S1'—C12—C13' | 110.3 (8) |
C2—C3—H3A | 109.4 | C13—C12—C13' | 127.1 (11) |
C4—C3—H3B | 109.4 | C12—S1—C15 | 92.6 (4) |
C2—C3—H3B | 109.4 | C12—S1'—C15' | 102.2 (6) |
H3A—C3—H3B | 108.0 | C14—C13—C12 | 95.8 (9) |
C3—C4—C5 | 110.8 (4) | C14—C13—H13 | 132.1 |
C3—C4—H4A | 109.5 | C12—C13—H13 | 132.1 |
C5—C4—H4A | 109.5 | C14'—C13'—C12 | 99.6 (13) |
C3—C4—H4B | 109.5 | C14'—C13'—H13' | 130.2 |
C5—C4—H4B | 109.5 | C12—C13'—H13' | 130.2 |
H4A—C4—H4B | 108.1 | C15—C14—C13 | 120.5 (8) |
C6—C5—C4 | 112.3 (3) | C15—C14—H14 | 119.8 |
C6—C5—H5A | 109.2 | C13—C14—H14 | 119.8 |
C4—C5—H5A | 109.2 | C15'—C14'—C13' | 117.0 (15) |
C6—C5—H5B | 109.2 | C15'—C14'—H14' | 121.5 |
C4—C5—H5B | 109.2 | C13'—C14'—H14' | 121.5 |
H5A—C5—H5B | 107.9 | C14—C15—S1 | 113.6 (6) |
C7—C6—C10 | 118.1 (3) | C14—C15—H15 | 123.2 |
C7—C6—C5 | 120.2 (3) | S1—C15—H15 | 123.2 |
C10—C6—C5 | 121.7 (3) | C14'—C15'—S1' | 110.9 (12) |
N1—C7—C6 | 120.2 (3) | C14'—C15'—H15' | 124.6 |
N1—C7—C2 | 114.9 (3) | S1'—C15'—H15' | 124.6 |
C6—C7—C2 | 124.9 (3) | ||
C7—C2—C3—C4 | −42.7 (5) | C9—C10—C12—S1' | −51.3 (6) |
C1—C2—C3—C4 | 82.7 (5) | C6—C10—C12—S1' | 127.3 (4) |
C2—C3—C4—C5 | 62.8 (5) | C9—C10—C12—S1 | 128.4 (4) |
C3—C4—C5—C6 | −49.6 (5) | C6—C10—C12—S1 | −52.9 (5) |
C4—C5—C6—C7 | 19.3 (6) | C9—C10—C12—C13 | −50.5 (4) |
C4—C5—C6—C10 | −159.4 (4) | C6—C10—C12—C13 | 128.2 (4) |
C8—N1—C7—C6 | −0.6 (7) | C9—C10—C12—C13' | 123.6 (5) |
C8—N1—C7—C2 | −179.4 (4) | C6—C10—C12—C13' | −57.7 (5) |
C10—C6—C7—N1 | −0.8 (6) | C10—C12—S1—C15 | −178.7 (4) |
C5—C6—C7—N1 | −179.5 (4) | S1'—C12—S1—C15 | 1.1 (3) |
C10—C6—C7—C2 | 177.8 (4) | C13—C12—S1—C15 | 0.15 (17) |
C5—C6—C7—C2 | −1.0 (6) | C13'—C12—S1—C15 | −155 (3) |
C1—C2—C7—N1 | 65.3 (5) | C10—C12—S1'—C15' | 175.7 (5) |
C3—C2—C7—N1 | −168.7 (4) | S1—C12—S1'—C15' | −4.1 (4) |
C1—C2—C7—C6 | −113.3 (5) | C13—C12—S1'—C15' | 173.1 (11) |
C3—C2—C7—C6 | 12.6 (6) | C13'—C12—S1'—C15' | 0.42 (19) |
C7—N1—C8—O1 | 179.8 (5) | C10—C12—C13—C14 | 178.9 (4) |
C7—N1—C8—C9 | 0.7 (7) | S1'—C12—C13—C14 | −3.2 (10) |
O1—C8—C9—C10 | −178.3 (5) | S1—C12—C13—C14 | −0.1 (2) |
N1—C8—C9—C10 | 0.8 (7) | C13'—C12—C13—C14 | 5.4 (5) |
O1—C8—C9—C11 | 3.1 (7) | C10—C12—C13'—C14' | −175.7 (4) |
N1—C8—C9—C11 | −177.9 (4) | S1'—C12—C13'—C14' | 0.2 (2) |
C11—C9—C10—C6 | 176.3 (4) | S1—C12—C13'—C14' | 25 (3) |
C8—C9—C10—C6 | −2.2 (6) | C13—C12—C13'—C14' | −2.5 (5) |
C11—C9—C10—C12 | −5.0 (6) | C12—C13—C14—C15 | 0.0 (4) |
C8—C9—C10—C12 | 176.4 (4) | C12—C13'—C14'—C15' | −1.0 (5) |
C7—C6—C10—C9 | 2.2 (5) | C13—C14—C15—S1 | 0.1 (6) |
C5—C6—C10—C9 | −179.1 (4) | C12—S1—C15—C14 | −0.2 (4) |
C7—C6—C10—C12 | −176.4 (4) | C13'—C14'—C15'—S1' | 1.3 (6) |
C5—C6—C10—C12 | 2.3 (6) | C12—S1'—C15'—C14' | −1.0 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1n···O1i | 0.88 | 1.94 | 2.801 (4) | 168 |
Symmetry code: (i) −x+2, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C15H14N2OS |
Mr | 270.34 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 7.6443 (3), 9.6909 (5), 9.9852 (5) |
α, β, γ (°) | 67.003 (5), 80.869 (4), 76.108 (4) |
V (Å3) | 659.26 (5) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.24 |
Crystal size (mm) | 0.30 × 0.20 × 0.05 |
Data collection | |
Diffractometer | Agilent SuperNova Dual diffractometer with an Atlas detector |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2012) |
Tmin, Tmax | 0.798, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9707, 3041, 2356 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.651 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.088, 0.230, 1.07 |
No. of reflections | 3041 |
No. of parameters | 185 |
No. of restraints | 33 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.02, −0.78 |
Computer programs: CrysAlis PRO (Agilent, 2012), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1n···O1i | 0.88 | 1.94 | 2.801 (4) | 167.5 |
Symmetry code: (i) −x+2, −y+1, −z+1. |
Footnotes
‡Additional correspondence author, e-mail: aasiri2@kau.edu.sa.
Acknowledgements
The authors are grateful to King Abdulaziz University for providing the research facilities. The authors also thank the Ministry of Higher Education (Malaysia) for funding structural studies through the High-Impact Research scheme (UM.C/HIR/MOHE/SC/12).
References
Agilent (2012). CrysAlis PRO. Agilent Technologies, Yarnton, Oxfordshire, England. Google Scholar
Asiri, A. M., Faidallah, H. M., Al-Youbi, A. O., Alamry, K. A. & Ng, S. W. (2011). Acta Cryst. E67, o2472. Web of Science CSD CrossRef IUCr Journals Google Scholar
Behit, A. A. & Baraka, A. M. (2005). Eur. J. Med. Chem. 40, 1405–1413. Web of Science PubMed Google Scholar
Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound (I) is a member of a series of cyano-pyridinones that have been evaluated for their cardiotonic (Behit & Baraka, 2005) and anti-inflammatory (Girgis et al., (2007) properties. Herein, the crystal and molecular structures of (I) are described.
In (I), Fig. 1, the pyridyl ring in the fused ring system is planar [r.m.s. deviation = 0.011 Å] and the cyclohexene ring has a twisted half-boat conformation with the methylene-C3 atom lying -0.592 (7) Å above the plane defined by the remaining five atoms [r.m.s. deviation = 0.108 Å]. There are two orientations of the thienyl ring [co-planar, with a dihedral angle of 4.4 (4)°, and of opposite orientations] both of which are inclined with respect to the pyridyl ring, forming dihedral angles of 51.4 (3)° [major component] and 54.2 (3)°, respectively. The molecular structure of (I) resembles that found in a literature structure with the exception of the C2—C3 conformation which is fused to a benzene ring (Asiri et al., 2011).
The familiar eight-membered centrosymmetric amide {···HNCO}2 synthon is observed in the crystal packing, Table 1. These are connected into a linear supramolecular chain along the a axis by π—π interactions that occur between centrosymmetrically related pyridyl rings [inter-centroid distance = 3.889 (2) Å for symmetry operation 1 - x, 1 - y, 1 - z], Fig. 2. Chains assemble into layers in the ab plane and stack along the c axis being separated by hydrophobic interactions, Fig. 3.