organic compounds
Ethyl (E)-3-hydroxy-2-{N-[2-(thiophen-2-yl)ethenyl]carbamoyl}but-2-enoate
aCollege of Chemistry, Chemical Engineering and Biotechnology, Donghua University, Shanghai 201620, People's Republic of China
*Correspondence e-mail: syzhao8@dhu.edu.cn
In the title compound, C13H15NO4S, there are two independent but conformationally similar molecules in the both having an E conformation of the side-chain C=C group. Intramolecular N—H⋯O and O—H⋯O hydrogen-bonding interactions are present in both molecules. In the crystal, one of the molecule types is linked through intermolecular hydroxy–ketone O—H⋯O interactions, forming one-dimensional chains extending along [010], whereas the other molecule type shows no associations.
Related literature
For applications of 4-hydroxy-2-pyridones, see: Buisson et al. (1996); Jessen & Gademann (2010). For general background to the synthesis, see: Rigby & Burkhardt (1986); Rigby & Qabar (1989). For the structure of a similar compound, see: Zhao & Huang (2012).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2003); cell SAINT (Bruker, 2003); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536812028176/zs2216sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812028176/zs2216Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812028176/zs2216Isup3.cml
To an ice-cooled solution of 3-(2-thienyl)acrylic acid (5.0 g, 32.5 mmol) in 70 ml of ethyl acetate was added triethylamine (4.3 g, 42.2 mmol) and diphenyl phosphorazidate (DPPA, 11.6 g, 42.2 mmol). The solution was stirred at room temperature for 4 h. The acyl azide product was washed by dilution with cold water. The organic layers were dried over MgSO4, and the solvent was removed under reduced pressure (< 318 K). The acyl azide was dissolved in 50 ml of benzene and heated under reflux until azide decomposition was complete. The reaction mixture was then cooled to 273 K and ethyl sodio-acetoacetate [prepared from ethyl acetoacetate (5.07 g, 39.0 mmol) and sodium hydride (1.1 g, 60% dispersion in oil, 45.5 mmol) in toluene (100 ml) at 273 K] was added. After warming to room temperature for 2 h, the mixture was quenched with saturated aqueous ammonium chloride solution, rinsed with brine, and dried over MgSO4. The solvent was removed in vacuo to give green crystals: 5.57 g, yield, 61.0% (m.p. 366–368 K). 1H NMR (400 MHz, chloroform-d) 1.37 (t, J = 7.1 Hz, 3H, CH3), 2.47 (s, 3H, CH3), 4.29 (q, J = 7.1 Hz, 2H, CH2), 6.41 (d, J = 14.5 Hz, 1H, =CH), 6.91 (s, 1H, Ar—H), 6.93 (d, J = 4.4 Hz, 1H, Ar—H), 7.10 (d, J = 4.9 Hz, 1H, Ar—H), 7.41 (dd, J = 14.3, 10.8 Hz, 1H, =CH), 11.06 (d, J = 10.0 Hz, 1H, NH), 18.04 (s, 1H, OH). Crystals suitable for single-crystal X-ray diffraction were grown by slow evaporation at room temperature from a solution in a mixture of hexane and ethyl acetate (10:1).
The amine hydrogen atom was located in a difference-Fourier map and refined freely. Other hydrogen atoms were positioned geometrically and refined using a riding model with O—H = 0.82 Å, C—H = 0.93 Å (CH), 0.96 Å (CH3) or 0.97 Å (CH2). Isotropic displacement parameters for these atoms were set to 1.2 (CH, CH2) or 1.5 (OH, CH3) times Ueq of the parent atom.
The derivatives of 4-hydroxy-2-pyridones exhibit a wide range of biological activities (Buisson et al., 1996; Jessen & Gademann, 2010). The title compound, C13H15NO4S, is an important intermediate in the synthesis of 4-hydroxy-2-pyridone derivatives (Rigby & Burkhardt, 1986; Rigby & Qabar, 1989). In the title compound, there are two independent but conformationally similar molecules in the ═C6. The is stabilized by intramolecular N—H···Oketone and hydroxyl O—H···Oketone hydrogen bonds (Table 1, Figs. 1 and 2).
(Figs. 1 and 2), both of which have an E configuration of the side chain C5In the crystal, only one of the molecule types is linked through intermolecular hydroxyl O—H···Oketone interactions forming one-dimensional chain structures extending along (010) (Fig. 3), whereas the other molecule type is unassociated. The thiophene rings have normal hydrophobic contacts without any stacking interactions. For the structure of a similar compound, see Zhao & Huang (2012).
For applications of 4-hydroxy-2-pyridones, see: Buisson et al. (1996); Jessen & Gademann (2010). For general background to the synthesis, see: Rigby & Burkhardt (1986); Rigby & Qabar (1989). For the structure of a similar compound, see: Zhao & Huang (2012).
Data collection: SMART (Bruker, 2003); cell
SAINT (Bruker, 2003); data reduction: SAINT (Bruker, 2003); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C13H15NO4S | F(000) = 1184 |
Mr = 281.33 | Dx = 1.363 Mg m−3 |
Monoclinic, P21/n | Melting point = 366–368 K |
Hall symbol: -P 2yn | Mo Kα radiation, λ = 0.71073 Å |
a = 14.0185 (15) Å | Cell parameters from 3746 reflections |
b = 13.1232 (14) Å | θ = 4.9–26.5° |
c = 15.0141 (16) Å | µ = 0.25 mm−1 |
β = 96.853 (2)° | T = 293 K |
V = 2742.4 (5) Å3 | Prismatic, white |
Z = 8 | 0.32 × 0.21 × 0.15 mm |
Bruker SMART CCD area-detector diffractometer | 5099 independent reflections |
Radiation source: fine-focus sealed tube | 3538 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.061 |
φ and ω scans | θmax = 25.5°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Bruker, 2003) | h = −15→16 |
Tmin = 0.394, Tmax = 1.000 | k = −15→14 |
15596 measured reflections | l = −18→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.057 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.179 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.1017P)2 + 0.3594P] where P = (Fo2 + 2Fc2)/3 |
5099 reflections | (Δ/σ)max < 0.001 |
357 parameters | Δρmax = 0.42 e Å−3 |
1 restraint | Δρmin = −0.34 e Å−3 |
C13H15NO4S | V = 2742.4 (5) Å3 |
Mr = 281.33 | Z = 8 |
Monoclinic, P21/n | Mo Kα radiation |
a = 14.0185 (15) Å | µ = 0.25 mm−1 |
b = 13.1232 (14) Å | T = 293 K |
c = 15.0141 (16) Å | 0.32 × 0.21 × 0.15 mm |
β = 96.853 (2)° |
Bruker SMART CCD area-detector diffractometer | 5099 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2003) | 3538 reflections with I > 2σ(I) |
Tmin = 0.394, Tmax = 1.000 | Rint = 0.061 |
15596 measured reflections |
R[F2 > 2σ(F2)] = 0.057 | 1 restraint |
wR(F2) = 0.179 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.42 e Å−3 |
5099 reflections | Δρmin = −0.34 e Å−3 |
357 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.36218 (6) | 0.30430 (6) | 0.06353 (5) | 0.0674 (3) | |
S1' | 0.60812 (7) | 0.54606 (7) | 0.67909 (7) | 0.0873 (3) | |
N1 | 0.64877 (16) | 0.25510 (18) | 0.23340 (16) | 0.0511 (6) | |
N1' | 0.89786 (17) | 0.6539 (2) | 0.81282 (16) | 0.0570 (6) | |
O1 | 0.68462 (15) | 0.41967 (13) | 0.22337 (15) | 0.0716 (6) | |
O2 | 0.83238 (15) | 0.49138 (13) | 0.29706 (14) | 0.0659 (6) | |
H2A | 0.7772 | 0.4877 | 0.2721 | 0.099* | |
O3 | 0.78402 (14) | 0.13804 (13) | 0.31666 (15) | 0.0682 (6) | |
O4 | 0.93063 (13) | 0.20136 (12) | 0.34348 (13) | 0.0594 (5) | |
O1' | 0.94002 (16) | 0.49320 (16) | 0.84332 (16) | 0.0792 (7) | |
O2' | 1.09020 (16) | 0.44802 (15) | 0.92784 (17) | 0.0805 (7) | |
H2' | 1.0350 | 0.4438 | 0.9029 | 0.121* | |
O3' | 1.02266 (15) | 0.79503 (14) | 0.86837 (14) | 0.0699 (6) | |
O4' | 1.16883 (13) | 0.74930 (13) | 0.92788 (12) | 0.0583 (5) | |
C1 | 0.2546 (2) | 0.2520 (2) | 0.02830 (19) | 0.0658 (8) | |
H1 | 0.2065 | 0.2853 | −0.0086 | 0.079* | |
C2 | 0.2461 (2) | 0.1575 (2) | 0.0591 (2) | 0.0702 (8) | |
H2 | 0.1909 | 0.1187 | 0.0447 | 0.084* | |
C3 | 0.32914 (19) | 0.1194 (2) | 0.11653 (18) | 0.0571 (7) | |
H3 | 0.3346 | 0.0561 | 0.1444 | 0.068* | |
C4 | 0.40153 (18) | 0.19769 (18) | 0.12237 (17) | 0.0489 (6) | |
C5 | 0.49619 (18) | 0.19051 (18) | 0.17316 (17) | 0.0512 (6) | |
H5 | 0.5141 | 0.1279 | 0.1989 | 0.061* | |
C6 | 0.55842 (19) | 0.26513 (19) | 0.18571 (17) | 0.0503 (6) | |
H6 | 0.5409 | 0.3285 | 0.1612 | 0.060* | |
C7 | 0.71066 (19) | 0.33179 (17) | 0.25083 (17) | 0.0492 (6) | |
C8 | 0.80519 (18) | 0.31539 (16) | 0.29962 (16) | 0.0442 (6) | |
C9 | 0.86181 (18) | 0.40078 (18) | 0.32367 (17) | 0.0483 (6) | |
C10 | 0.9549 (2) | 0.4027 (2) | 0.3815 (2) | 0.0631 (8) | |
H10A | 1.0050 | 0.3813 | 0.3474 | 0.095* | |
H10B | 0.9522 | 0.3574 | 0.4313 | 0.095* | |
H10C | 0.9678 | 0.4707 | 0.4032 | 0.095* | |
C11 | 0.83634 (18) | 0.21138 (17) | 0.32113 (16) | 0.0470 (6) | |
C12 | 0.9659 (2) | 0.0986 (2) | 0.3595 (2) | 0.0732 (9) | |
H12A | 0.9616 | 0.0610 | 0.3035 | 0.088* | |
H12B | 0.9279 | 0.0634 | 0.3998 | 0.088* | |
C13 | 1.0655 (3) | 0.1052 (3) | 0.3993 (3) | 0.1086 (15) | |
H13A | 1.1034 | 0.1357 | 0.3572 | 0.163* | |
H13B | 1.0894 | 0.0381 | 0.4145 | 0.163* | |
H13C | 1.0694 | 0.1463 | 0.4526 | 0.163* | |
C1' | 0.5056 (3) | 0.5833 (4) | 0.6165 (3) | 0.0967 (13) | |
H1' | 0.4553 | 0.5394 | 0.5973 | 0.116* | |
C2' | 0.5052 (2) | 0.6825 (4) | 0.5977 (2) | 0.0845 (11) | |
H2'1 | 0.4546 | 0.7156 | 0.5637 | 0.101* | |
C3' | 0.5891 (2) | 0.7312 (3) | 0.63484 (19) | 0.0637 (7) | |
H3' | 0.6001 | 0.8005 | 0.6283 | 0.076* | |
C4' | 0.6534 (2) | 0.6673 (2) | 0.68161 (17) | 0.0557 (7) | |
C5' | 0.7466 (2) | 0.6926 (2) | 0.72761 (18) | 0.0576 (7) | |
H5' | 0.7641 | 0.7610 | 0.7286 | 0.069* | |
C6' | 0.8093 (2) | 0.6281 (2) | 0.76828 (18) | 0.0576 (7) | |
H6' | 0.7925 | 0.5595 | 0.7669 | 0.069* | |
C7' | 0.9618 (2) | 0.5860 (2) | 0.84934 (18) | 0.0556 (7) | |
C8' | 1.05502 (19) | 0.61925 (19) | 0.89353 (17) | 0.0501 (6) | |
C9' | 1.1163 (2) | 0.5435 (2) | 0.93281 (19) | 0.0594 (7) | |
C10' | 1.2130 (2) | 0.5563 (2) | 0.9827 (2) | 0.0771 (9) | |
H10D | 1.2297 | 0.4963 | 1.0177 | 0.116* | |
H10E | 1.2130 | 0.6143 | 1.0218 | 0.116* | |
H10F | 1.2590 | 0.5667 | 0.9411 | 0.116* | |
C11' | 1.07879 (19) | 0.7279 (2) | 0.89515 (16) | 0.0505 (6) | |
C12' | 1.1946 (2) | 0.8560 (2) | 0.93642 (19) | 0.0609 (7) | |
H12C | 1.1504 | 0.8917 | 0.9706 | 0.073* | |
H12D | 1.1917 | 0.8873 | 0.8776 | 0.073* | |
C13' | 1.2938 (2) | 0.8616 (2) | 0.9834 (2) | 0.0691 (8) | |
H13D | 1.2952 | 0.8330 | 1.0423 | 0.104* | |
H13E | 1.3140 | 0.9315 | 0.9880 | 0.104* | |
H13F | 1.3364 | 0.8240 | 0.9501 | 0.104* | |
H1A | 0.661 (2) | 0.208 (2) | 0.2506 (19) | 0.055 (9)* | |
H1'A | 0.912 (2) | 0.711 (2) | 0.818 (2) | 0.066 (10)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0635 (5) | 0.0618 (5) | 0.0737 (5) | −0.0007 (3) | −0.0051 (4) | 0.0088 (3) |
S1' | 0.0765 (6) | 0.0780 (6) | 0.1028 (7) | −0.0186 (5) | −0.0078 (5) | 0.0014 (5) |
N1 | 0.0471 (13) | 0.0350 (12) | 0.0689 (15) | 0.0038 (10) | −0.0025 (10) | 0.0029 (10) |
N1' | 0.0489 (14) | 0.0548 (15) | 0.0644 (15) | 0.0007 (11) | −0.0052 (11) | −0.0071 (11) |
O1 | 0.0608 (13) | 0.0382 (10) | 0.1093 (16) | 0.0041 (9) | −0.0166 (11) | 0.0125 (10) |
O2 | 0.0665 (14) | 0.0344 (9) | 0.0914 (15) | −0.0025 (8) | −0.0122 (11) | 0.0027 (9) |
O3 | 0.0576 (12) | 0.0332 (9) | 0.1070 (16) | −0.0027 (8) | −0.0186 (11) | 0.0007 (9) |
O4 | 0.0492 (11) | 0.0376 (9) | 0.0874 (13) | 0.0054 (8) | −0.0084 (10) | −0.0022 (8) |
O1' | 0.0706 (14) | 0.0529 (12) | 0.1078 (17) | −0.0076 (10) | −0.0155 (12) | −0.0068 (11) |
O2' | 0.0668 (15) | 0.0505 (12) | 0.1185 (19) | 0.0000 (10) | −0.0117 (13) | 0.0073 (11) |
O3' | 0.0685 (14) | 0.0478 (10) | 0.0869 (14) | 0.0034 (9) | −0.0175 (11) | 0.0026 (9) |
O4' | 0.0521 (11) | 0.0458 (10) | 0.0752 (12) | −0.0046 (8) | −0.0004 (9) | −0.0048 (8) |
C1 | 0.0579 (18) | 0.0688 (19) | 0.0661 (18) | 0.0031 (14) | −0.0113 (14) | −0.0008 (14) |
C2 | 0.0564 (18) | 0.0648 (18) | 0.083 (2) | −0.0062 (14) | −0.0199 (14) | −0.0006 (15) |
C3 | 0.0506 (15) | 0.0484 (14) | 0.0669 (17) | 0.0010 (12) | −0.0149 (12) | −0.0134 (12) |
C4 | 0.0504 (15) | 0.0441 (13) | 0.0510 (14) | 0.0044 (11) | 0.0007 (12) | −0.0056 (10) |
C5 | 0.0494 (15) | 0.0413 (13) | 0.0615 (16) | 0.0053 (11) | 0.0007 (12) | −0.0027 (11) |
C6 | 0.0489 (15) | 0.0428 (13) | 0.0575 (15) | 0.0068 (11) | −0.0009 (12) | 0.0005 (11) |
C7 | 0.0515 (16) | 0.0361 (12) | 0.0592 (15) | 0.0015 (11) | 0.0036 (12) | −0.0002 (10) |
C8 | 0.0481 (15) | 0.0336 (12) | 0.0498 (13) | 0.0017 (10) | 0.0017 (11) | −0.0035 (9) |
C9 | 0.0529 (16) | 0.0374 (13) | 0.0541 (15) | −0.0004 (11) | 0.0042 (12) | −0.0021 (10) |
C10 | 0.0678 (19) | 0.0431 (14) | 0.0742 (18) | −0.0095 (13) | −0.0092 (15) | −0.0037 (12) |
C11 | 0.0494 (15) | 0.0362 (12) | 0.0526 (14) | 0.0016 (11) | −0.0051 (11) | −0.0044 (10) |
C12 | 0.0647 (19) | 0.0408 (15) | 0.107 (2) | 0.0112 (13) | −0.0169 (17) | −0.0062 (14) |
C13 | 0.068 (2) | 0.067 (2) | 0.179 (4) | 0.0143 (18) | −0.034 (3) | −0.007 (2) |
C1' | 0.065 (2) | 0.137 (4) | 0.085 (2) | −0.029 (2) | −0.0066 (18) | −0.025 (2) |
C2' | 0.058 (2) | 0.125 (3) | 0.067 (2) | 0.008 (2) | −0.0069 (16) | −0.008 (2) |
C3' | 0.0518 (17) | 0.0746 (19) | 0.0628 (17) | 0.0080 (14) | −0.0007 (13) | −0.0031 (14) |
C4' | 0.0528 (17) | 0.0661 (17) | 0.0484 (15) | −0.0024 (13) | 0.0063 (12) | −0.0088 (12) |
C5' | 0.0533 (17) | 0.0620 (16) | 0.0573 (16) | −0.0024 (13) | 0.0055 (13) | −0.0075 (13) |
C6' | 0.0547 (17) | 0.0616 (16) | 0.0548 (16) | −0.0010 (13) | −0.0008 (13) | −0.0072 (12) |
C7' | 0.0558 (17) | 0.0484 (15) | 0.0612 (17) | 0.0003 (12) | 0.0021 (13) | −0.0056 (12) |
C8' | 0.0464 (15) | 0.0470 (13) | 0.0560 (15) | 0.0023 (11) | 0.0020 (12) | −0.0026 (11) |
C9' | 0.0541 (17) | 0.0515 (16) | 0.0710 (18) | 0.0005 (12) | 0.0014 (14) | 0.0016 (13) |
C10' | 0.0569 (19) | 0.0627 (18) | 0.106 (3) | 0.0054 (15) | −0.0114 (17) | 0.0150 (17) |
C11' | 0.0514 (16) | 0.0523 (14) | 0.0464 (14) | −0.0004 (12) | 0.0001 (12) | −0.0022 (11) |
C12' | 0.0695 (19) | 0.0465 (15) | 0.0656 (17) | −0.0104 (13) | 0.0035 (14) | −0.0012 (12) |
C13' | 0.0647 (19) | 0.0686 (19) | 0.073 (2) | −0.0158 (15) | 0.0051 (15) | −0.0085 (15) |
S1—C1 | 1.684 (3) | C8—C11 | 1.458 (3) |
S1—C4 | 1.710 (3) | C9—C10 | 1.478 (3) |
S1'—C1' | 1.692 (4) | C10—H10A | 0.9600 |
S1'—C4' | 1.712 (3) | C10—H10B | 0.9600 |
N1—C7 | 1.334 (3) | C10—H10C | 0.9600 |
N1—C6 | 1.385 (3) | C12—C13 | 1.454 (4) |
N1—H1A | 0.68 (3) | C12—H12A | 0.9700 |
N1'—C7' | 1.335 (4) | C12—H12B | 0.9700 |
N1'—C6' | 1.381 (3) | C13—H13A | 0.9600 |
N1'—H1'A | 0.77 (3) | C13—H13B | 0.9600 |
O1—C7 | 1.264 (3) | C13—H13C | 0.9600 |
O2—C9 | 1.305 (3) | C1'—C2' | 1.332 (6) |
O2—H2A | 0.8200 | C1'—H1' | 0.9300 |
O3—C11 | 1.207 (3) | C2'—C3' | 1.396 (4) |
O4—C11 | 1.331 (3) | C2'—H2'1 | 0.9300 |
O4—C12 | 1.447 (3) | C3'—C4' | 1.363 (4) |
O1'—C7' | 1.256 (3) | C3'—H3' | 0.9300 |
O2'—C9' | 1.304 (3) | C4'—C5' | 1.442 (4) |
O2'—H2' | 0.8200 | C5'—C6' | 1.316 (4) |
O3'—C11' | 1.217 (3) | C5'—H5' | 0.9300 |
O4'—C11' | 1.329 (3) | C6'—H6' | 0.9300 |
O4'—C12' | 1.448 (3) | C7'—C8' | 1.460 (4) |
C1—C2 | 1.334 (4) | C8'—C9' | 1.398 (4) |
C1—H1 | 0.9300 | C8'—C11' | 1.464 (4) |
C2—C3 | 1.452 (4) | C9'—C10' | 1.478 (4) |
C2—H2 | 0.9300 | C10'—H10D | 0.9600 |
C3—C4 | 1.439 (4) | C10'—H10E | 0.9600 |
C3—H3 | 0.9300 | C10'—H10F | 0.9600 |
C4—C5 | 1.453 (3) | C12'—C13' | 1.484 (4) |
C5—C6 | 1.310 (4) | C12'—H12C | 0.9700 |
C5—H5 | 0.9300 | C12'—H12D | 0.9700 |
C6—H6 | 0.9300 | C13'—H13D | 0.9600 |
C7—C8 | 1.452 (3) | C13'—H13E | 0.9600 |
C8—C9 | 1.396 (3) | C13'—H13F | 0.9600 |
C1—S1—C4 | 92.87 (14) | C12—C13—H13A | 109.5 |
C1'—S1'—C4' | 91.8 (2) | C12—C13—H13B | 109.5 |
C7—N1—C6 | 124.3 (2) | H13A—C13—H13B | 109.5 |
C7—N1—H1A | 119 (3) | C12—C13—H13C | 109.5 |
C6—N1—H1A | 117 (3) | H13A—C13—H13C | 109.5 |
C7'—N1'—C6' | 123.8 (3) | H13B—C13—H13C | 109.5 |
C7'—N1'—H1'A | 117 (2) | C2'—C1'—S1' | 112.5 (3) |
C6'—N1'—H1'A | 120 (2) | C2'—C1'—H1' | 123.8 |
C9—O2—H2A | 109.5 | S1'—C1'—H1' | 123.8 |
C11—O4—C12 | 116.3 (2) | C1'—C2'—C3' | 112.3 (3) |
C9'—O2'—H2' | 109.5 | C1'—C2'—H2'1 | 123.8 |
C11'—O4'—C12' | 117.0 (2) | C3'—C2'—H2'1 | 123.8 |
C2—C1—S1 | 112.6 (2) | C4'—C3'—C2' | 113.5 (3) |
C2—C1—H1 | 123.7 | C4'—C3'—H3' | 123.3 |
S1—C1—H1 | 123.7 | C2'—C3'—H3' | 123.3 |
C1—C2—C3 | 115.3 (3) | C3'—C4'—C5' | 127.6 (3) |
C1—C2—H2 | 122.4 | C3'—C4'—S1' | 109.9 (2) |
C3—C2—H2 | 122.4 | C5'—C4'—S1' | 122.5 (2) |
C4—C3—C2 | 107.5 (2) | C6'—C5'—C4' | 126.2 (3) |
C4—C3—H3 | 126.3 | C6'—C5'—H5' | 116.9 |
C2—C3—H3 | 126.3 | C4'—C5'—H5' | 116.9 |
C3—C4—C5 | 125.4 (2) | C5'—C6'—N1' | 125.3 (3) |
C3—C4—S1 | 111.76 (19) | C5'—C6'—H6' | 117.3 |
C5—C4—S1 | 122.84 (19) | N1'—C6'—H6' | 117.3 |
C6—C5—C4 | 125.3 (2) | O1'—C7'—N1' | 118.2 (3) |
C6—C5—H5 | 117.3 | O1'—C7'—C8' | 121.3 (2) |
C4—C5—H5 | 117.3 | N1'—C7'—C8' | 120.5 (2) |
C5—C6—N1 | 123.8 (2) | C9'—C8'—C7' | 116.8 (2) |
C5—C6—H6 | 118.1 | C9'—C8'—C11' | 124.0 (2) |
N1—C6—H6 | 118.1 | C7'—C8'—C11' | 119.2 (2) |
O1—C7—N1 | 117.9 (2) | O2'—C9'—C8' | 120.3 (3) |
O1—C7—C8 | 120.7 (2) | O2'—C9'—C10' | 111.9 (2) |
N1—C7—C8 | 121.3 (2) | C8'—C9'—C10' | 127.8 (3) |
C9—C8—C7 | 117.9 (2) | C9'—C10'—H10D | 109.5 |
C9—C8—C11 | 123.3 (2) | C9'—C10'—H10E | 109.5 |
C7—C8—C11 | 118.8 (2) | H10D—C10'—H10E | 109.5 |
O2—C9—C8 | 120.2 (2) | C9'—C10'—H10F | 109.5 |
O2—C9—C10 | 112.8 (2) | H10D—C10'—H10F | 109.5 |
C8—C9—C10 | 126.9 (2) | H10E—C10'—H10F | 109.5 |
C9—C10—H10A | 109.5 | O3'—C11'—O4' | 121.1 (2) |
C9—C10—H10B | 109.5 | O3'—C11'—C8' | 124.2 (2) |
H10A—C10—H10B | 109.5 | O4'—C11'—C8' | 114.6 (2) |
C9—C10—H10C | 109.5 | O4'—C12'—C13' | 107.5 (2) |
H10A—C10—H10C | 109.5 | O4'—C12'—H12C | 110.2 |
H10B—C10—H10C | 109.5 | C13'—C12'—H12C | 110.2 |
O3—C11—O4 | 120.9 (2) | O4'—C12'—H12D | 110.2 |
O3—C11—C8 | 124.8 (2) | C13'—C12'—H12D | 110.2 |
O4—C11—C8 | 114.2 (2) | H12C—C12'—H12D | 108.5 |
O4—C12—C13 | 107.8 (2) | C12'—C13'—H13D | 109.5 |
O4—C12—H12A | 110.2 | C12'—C13'—H13E | 109.5 |
C13—C12—H12A | 110.2 | H13D—C13'—H13E | 109.5 |
O4—C12—H12B | 110.2 | C12'—C13'—H13F | 109.5 |
C13—C12—H12B | 110.2 | H13D—C13'—H13F | 109.5 |
H12A—C12—H12B | 108.5 | H13E—C13'—H13F | 109.5 |
C4—S1—C1—C2 | 0.3 (3) | C4'—S1'—C1'—C2' | 0.3 (3) |
S1—C1—C2—C3 | 0.6 (4) | S1'—C1'—C2'—C3' | −0.4 (4) |
C1—C2—C3—C4 | −1.4 (4) | C1'—C2'—C3'—C4' | 0.4 (4) |
C2—C3—C4—C5 | −179.8 (3) | C2'—C3'—C4'—C5' | 179.7 (3) |
C2—C3—C4—S1 | 1.6 (3) | C2'—C3'—C4'—S1' | −0.2 (3) |
C1—S1—C4—C3 | −1.2 (2) | C1'—S1'—C4'—C3' | −0.1 (2) |
C1—S1—C4—C5 | −179.8 (2) | C1'—S1'—C4'—C5' | −179.9 (2) |
C3—C4—C5—C6 | −172.9 (3) | C3'—C4'—C5'—C6' | −176.2 (3) |
S1—C4—C5—C6 | 5.6 (4) | S1'—C4'—C5'—C6' | 3.7 (4) |
C4—C5—C6—N1 | −178.9 (2) | C4'—C5'—C6'—N1' | −179.3 (3) |
C7—N1—C6—C5 | −176.1 (3) | C7'—N1'—C6'—C5' | −176.3 (3) |
C6—N1—C7—O1 | 1.2 (4) | C6'—N1'—C7'—O1' | −0.4 (4) |
C6—N1—C7—C8 | −178.6 (2) | C6'—N1'—C7'—C8' | 178.5 (3) |
O1—C7—C8—C9 | 6.9 (4) | O1'—C7'—C8'—C9' | −3.4 (4) |
N1—C7—C8—C9 | −173.2 (2) | N1'—C7'—C8'—C9' | 177.8 (3) |
O1—C7—C8—C11 | −173.1 (2) | O1'—C7'—C8'—C11' | 177.1 (3) |
N1—C7—C8—C11 | 6.7 (4) | N1'—C7'—C8'—C11' | −1.7 (4) |
C7—C8—C9—O2 | −4.7 (4) | C7'—C8'—C9'—O2' | 1.1 (4) |
C11—C8—C9—O2 | 175.3 (2) | C11'—C8'—C9'—O2' | −179.4 (3) |
C7—C8—C9—C10 | 172.8 (3) | C7'—C8'—C9'—C10' | −178.8 (3) |
C11—C8—C9—C10 | −7.2 (4) | C11'—C8'—C9'—C10' | 0.7 (5) |
C12—O4—C11—O3 | 1.5 (4) | C12'—O4'—C11'—O3' | 4.6 (4) |
C12—O4—C11—C8 | −175.9 (2) | C12'—O4'—C11'—C8' | −176.1 (2) |
C9—C8—C11—O3 | 165.5 (3) | C9'—C8'—C11'—O3' | −173.0 (3) |
C7—C8—C11—O3 | −14.5 (4) | C7'—C8'—C11'—O3' | 6.4 (4) |
C9—C8—C11—O4 | −17.2 (4) | C9'—C8'—C11'—O4' | 7.7 (4) |
C7—C8—C11—O4 | 162.8 (2) | C7'—C8'—C11'—O4' | −172.8 (2) |
C11—O4—C12—C13 | −169.1 (3) | C11'—O4'—C12'—C13' | 173.7 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1′—H1′A···O3′ | 0.77 (3) | 1.98 (3) | 2.615 (3) | 139 (3) |
N1—H1A···O3 | 0.68 (3) | 2.10 (3) | 2.637 (3) | 137 (3) |
O2′—H2′···O1′ | 0.82 | 1.65 | 2.399 (3) | 152 |
O2—H2A···O1 | 0.82 | 1.67 | 2.419 (3) | 151 |
O2—H2A···O3i | 0.82 | 2.48 | 2.936 (3) | 117 |
Symmetry code: (i) −x+3/2, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C13H15NO4S |
Mr | 281.33 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 14.0185 (15), 13.1232 (14), 15.0141 (16) |
β (°) | 96.853 (2) |
V (Å3) | 2742.4 (5) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.25 |
Crystal size (mm) | 0.32 × 0.21 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2003) |
Tmin, Tmax | 0.394, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15596, 5099, 3538 |
Rint | 0.061 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.057, 0.179, 1.05 |
No. of reflections | 5099 |
No. of parameters | 357 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.42, −0.34 |
Computer programs: SMART (Bruker, 2003), SAINT (Bruker, 2003), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1'—H1'A···O3' | 0.77 (3) | 1.98 (3) | 2.615 (3) | 139 (3) |
N1—H1A···O3 | 0.68 (3) | 2.10 (3) | 2.637 (3) | 137 (3) |
O2'—H2'···O1' | 0.82 | 1.65 | 2.399 (3) | 152 |
O2—H2A···O1 | 0.82 | 1.67 | 2.419 (3) | 151 |
O2—H2A···O3i | 0.82 | 2.48 | 2.936 (3) | 117 |
Symmetry code: (i) −x+3/2, y+1/2, −z+1/2. |
Acknowledgements
The authors acknowledge financial support from the National Natural Science Foundation of China (grant No. 21072029) and the Shanghai Municipal Natural Science Foundation (grant No. 10ZR1400700).
References
Bruker (2003). SMART, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Buisson, J. P., Bisagni, E., Monneret, C., Demerseman, P., Leon, C. & Platzer, N. (1996). J. Heterocycl. Chem. 33, 973–977. CrossRef CAS Google Scholar
Jessen, H. J. & Gademann, K. (2010). Nat. Prod. Rep. 27, 1168–1185. Web of Science CrossRef CAS PubMed Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The derivatives of 4-hydroxy-2-pyridones exhibit a wide range of biological activities (Buisson et al., 1996; Jessen & Gademann, 2010). The title compound, C13H15NO4S, is an important intermediate in the synthesis of 4-hydroxy-2-pyridone derivatives (Rigby & Burkhardt, 1986; Rigby & Qabar, 1989). In the title compound, there are two independent but conformationally similar molecules in the asymmetric unit (Figs. 1 and 2), both of which have an E configuration of the side chain C5═C6. The molecular conformation is stabilized by intramolecular N—H···Oketone and hydroxyl O—H···Oketone hydrogen bonds (Table 1, Figs. 1 and 2).
In the crystal, only one of the molecule types is linked through intermolecular hydroxyl O—H···Oketone interactions forming one-dimensional chain structures extending along (010) (Fig. 3), whereas the other molecule type is unassociated. The thiophene rings have normal hydrophobic contacts without any stacking interactions. For the structure of a similar compound, see Zhao & Huang (2012).