organic compounds
2,4-Bis[(prop-2-ynyl)oxy]benzaldehyde
aChemistry Research Centre, National Engineering College, K. R. Nagar, Kovilpatti 628 503, India, and bCAS in Crystallography and Biophysics, University of Madras, Guindy Campus, Chennai 25, India
*Correspondence e-mail: drmaneelakantan@gmail.com
In the title compound, C13H10O3, two prop-2-ynyloxy groups are attached to the benzaldehyde ring at positions 2 and 6. The crystal packing features C—H⋯O interactions.
Related literature
For the biological activity of benzaldehyde derivatives, see: Zhao et al. (2007). For related literature, see: Delogu et al. (2010); Ley & Bertram (2001). For hydrogen-bond motifs, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2008); cell APEX2; data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536812031637/bt5961sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812031637/bt5961Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812031637/bt5961Isup3.cml
2,4-dihydroxybenzaldehyde (10 mmol), 3-bromopropyne (20 mmol) and potassium carbonate (15 mmol) were suspended in acetonitrile (40 ml) and refluxed for 30 h in presence of KI (0.1 g) as catalyst. The reaction mixture was filtered while hot to remove insoluble impurities, neutralized with dil.HCl (3 N) and extracted with chloroform and dried with Na2SO4. The extracts were concentrated to obtain a brown solid which was then purified by
over SiO2 by eluting a mixture of 4% ethyl acetate with n-hexane. Evaporation of the purified extract yielded 2, 4-dipropynoxybenzaldehyde in the form of pure white solid. Yield: 85%. Crystals suitable for X-ray analysis were obtained by slow evaporation method.H atoms were positioned geometrically (C–H = 0.93–0.97 Å) and allowed to ride on their parent atoms, with Uiso(H) = 1.2Ueq(C).
The Schiff base derived from
and substitued benzaldehydes exhibit antibacterial, anticancer and antitumour activities (Zhao et al. (2007)). Several benzaldoximes, benzaldehyde-O-ethyloximes, and acetophenonoximes were synthesized and evaluated as tyrosinase inhibitors (Ley & Bertram (2001)). The bis-salicylaldehydes exhibited greater inhibitory activity than salicylaldehyde (Delogu et al.(2010)).The ORTEP plot of the molecule is shown in Fig. 1. The dihedral angles of phenyl ring (C2—C7) attached to prop-2-yn-1-yloxy group at 2, 6-positions (O2/C8/C9/C10) & (O3/C11/C12/C13) are 82.3 (1)° & 71.4 (1)°, respectively. The prop-2-yn-1-yloxy group is in an extended conformation which can be seen from torsion angles O2/C8/C9/C10= -177.0 (10)° and O3/C11/C12/C13= 166 (6)°, respectively.
The crystal packing includes an inter-molecular interaction between a terminal ethynyl H atom and an ethynyl group on a glide-related molecule and another interaction between an O-atom-linked methylene H and an ethynyl group of a different glide-related molecule.
The packing of the molecules viewed down a axis is shown in Fig. 2. The molecules are stabilized by C—H···π and bifurcated C—H···O types of intra and intermolecular interactions, which form a dimer C8 chain running along the a axis (Bernstein et al., 1995).
For the biological activity of benzaldehyde derivatives, see: Zhao et al. (2007). For related literature, see: Delogu et al. (2010); Ley & Bertram (2001). For hydrogen-bond motifs, see: Bernstein et al. (1995).
Data collection: APEX2 (Bruker, 2008); cell
APEX2 (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).C13H10O3 | F(000) = 448 |
Mr = 214.21 | Dx = 1.289 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 2754 reflections |
a = 4.9219 (2) Å | θ = 2.0–28.4° |
b = 16.8705 (7) Å | µ = 0.09 mm−1 |
c = 13.4326 (6) Å | T = 293 K |
β = 98.236 (3)° | Block, colourless |
V = 1103.87 (8) Å3 | 0.20 × 0.20 × 0.20 mm |
Z = 4 |
Bruker SMART APEXII area-detector diffractometer | 2754 independent reflections |
Radiation source: fine-focus sealed tube | 2177 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.025 |
ω and φ scans | θmax = 28.4°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | h = −6→6 |
Tmin = 0.982, Tmax = 0.982 | k = −22→22 |
10446 measured reflections | l = −16→17 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.039 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.113 | w = 1/[σ2(Fo2) + (0.0546P)2 + 0.1741P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
2754 reflections | Δρmax = 0.25 e Å−3 |
154 parameters | Δρmin = −0.16 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.035 (4) |
C13H10O3 | V = 1103.87 (8) Å3 |
Mr = 214.21 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 4.9219 (2) Å | µ = 0.09 mm−1 |
b = 16.8705 (7) Å | T = 293 K |
c = 13.4326 (6) Å | 0.20 × 0.20 × 0.20 mm |
β = 98.236 (3)° |
Bruker SMART APEXII area-detector diffractometer | 2754 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | 2177 reflections with I > 2σ(I) |
Tmin = 0.982, Tmax = 0.982 | Rint = 0.025 |
10446 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.113 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.25 e Å−3 |
2754 reflections | Δρmin = −0.16 e Å−3 |
154 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O2 | 0.05286 (17) | 0.31557 (5) | 0.65108 (6) | 0.0445 (2) | |
O3 | 0.68295 (18) | 0.16361 (5) | 0.49674 (7) | 0.0501 (3) | |
O1 | 0.0285 (2) | 0.15987 (5) | 0.87280 (7) | 0.0554 (3) | |
C6 | 0.3759 (2) | 0.23786 (7) | 0.57231 (9) | 0.0396 (3) | |
H6 | 0.3799 | 0.2751 | 0.5214 | 0.047* | |
C2 | 0.2097 (2) | 0.19456 (6) | 0.72497 (8) | 0.0376 (3) | |
C3 | 0.3673 (2) | 0.12642 (7) | 0.72331 (9) | 0.0430 (3) | |
H3 | 0.3642 | 0.0890 | 0.7739 | 0.052* | |
C4 | 0.5284 (2) | 0.11234 (7) | 0.64902 (9) | 0.0447 (3) | |
H4 | 0.6320 | 0.0662 | 0.6492 | 0.054* | |
C9 | −0.1318 (3) | 0.43691 (7) | 0.59180 (9) | 0.0447 (3) | |
C7 | 0.2148 (2) | 0.25048 (6) | 0.64716 (8) | 0.0361 (2) | |
C5 | 0.5317 (2) | 0.16901 (7) | 0.57387 (9) | 0.0398 (3) | |
C12 | 0.9705 (3) | 0.09766 (8) | 0.40030 (11) | 0.0554 (3) | |
C1 | 0.0455 (3) | 0.20717 (7) | 0.80598 (9) | 0.0459 (3) | |
H1 | −0.0521 | 0.2544 | 0.8063 | 0.055* | |
C10 | −0.2730 (3) | 0.49054 (8) | 0.60585 (11) | 0.0539 (3) | |
C11 | 0.8314 (3) | 0.09202 (8) | 0.48871 (10) | 0.0495 (3) | |
H11A | 0.7066 | 0.0472 | 0.4822 | 0.059* | |
H11B | 0.9646 | 0.0844 | 0.5485 | 0.059* | |
C8 | 0.0455 (3) | 0.37140 (7) | 0.57073 (9) | 0.0453 (3) | |
H8A | −0.0264 | 0.3465 | 0.5073 | 0.054* | |
H8B | 0.2290 | 0.3907 | 0.5663 | 0.054* | |
C13 | 1.0861 (4) | 0.10046 (11) | 0.33041 (14) | 0.0791 (5) | |
H10 | −0.379 (4) | 0.5352 (11) | 0.6156 (14) | 0.087 (6)* | |
H13 | 1.176 (5) | 0.1042 (13) | 0.2780 (18) | 0.114 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O2 | 0.0548 (5) | 0.0381 (4) | 0.0443 (5) | 0.0099 (4) | 0.0197 (4) | 0.0088 (3) |
O3 | 0.0517 (5) | 0.0511 (5) | 0.0520 (5) | 0.0140 (4) | 0.0224 (4) | 0.0074 (4) |
O1 | 0.0824 (7) | 0.0460 (5) | 0.0421 (5) | −0.0069 (4) | 0.0231 (5) | 0.0041 (4) |
C6 | 0.0420 (6) | 0.0392 (6) | 0.0391 (6) | 0.0024 (5) | 0.0107 (5) | 0.0070 (5) |
C2 | 0.0419 (6) | 0.0363 (6) | 0.0351 (5) | −0.0024 (4) | 0.0070 (4) | 0.0019 (4) |
C3 | 0.0493 (7) | 0.0398 (6) | 0.0400 (6) | 0.0020 (5) | 0.0068 (5) | 0.0085 (5) |
C4 | 0.0453 (6) | 0.0406 (6) | 0.0484 (7) | 0.0091 (5) | 0.0081 (5) | 0.0052 (5) |
C9 | 0.0512 (7) | 0.0403 (6) | 0.0432 (6) | 0.0027 (5) | 0.0090 (5) | 0.0061 (5) |
C7 | 0.0376 (5) | 0.0335 (5) | 0.0377 (6) | 0.0004 (4) | 0.0072 (4) | 0.0020 (4) |
C5 | 0.0361 (5) | 0.0439 (6) | 0.0402 (6) | 0.0021 (4) | 0.0089 (4) | 0.0009 (5) |
C12 | 0.0588 (8) | 0.0540 (8) | 0.0555 (8) | 0.0105 (6) | 0.0152 (6) | −0.0073 (6) |
C1 | 0.0597 (7) | 0.0398 (6) | 0.0409 (6) | −0.0003 (5) | 0.0158 (5) | 0.0017 (5) |
C10 | 0.0645 (8) | 0.0434 (7) | 0.0551 (8) | 0.0106 (6) | 0.0129 (6) | 0.0036 (6) |
C11 | 0.0487 (7) | 0.0486 (7) | 0.0533 (7) | 0.0094 (5) | 0.0146 (6) | −0.0023 (6) |
C8 | 0.0520 (7) | 0.0425 (6) | 0.0437 (6) | 0.0085 (5) | 0.0147 (5) | 0.0105 (5) |
C13 | 0.0998 (13) | 0.0800 (12) | 0.0659 (10) | 0.0122 (10) | 0.0402 (10) | −0.0076 (9) |
O2—C7 | 1.3622 (13) | C4—C5 | 1.3922 (16) |
O2—C8 | 1.4292 (14) | C4—H4 | 0.9300 |
O3—C5 | 1.3626 (13) | C9—C10 | 1.1722 (18) |
O3—C11 | 1.4235 (14) | C9—C8 | 1.4608 (16) |
O1—C1 | 1.2127 (14) | C12—C13 | 1.166 (2) |
C6—C7 | 1.3832 (15) | C12—C11 | 1.4565 (18) |
C6—C5 | 1.3905 (15) | C1—H1 | 0.9300 |
C6—H6 | 0.9300 | C10—H10 | 0.935 (19) |
C2—C3 | 1.3886 (16) | C11—H11A | 0.9700 |
C2—C7 | 1.4109 (15) | C11—H11B | 0.9700 |
C2—C1 | 1.4611 (15) | C8—H8A | 0.9700 |
C3—C4 | 1.3814 (17) | C8—H8B | 0.9700 |
C3—H3 | 0.9300 | C13—H13 | 0.89 (2) |
C7—O2—C8 | 116.99 (8) | C6—C5—C4 | 121.39 (10) |
C5—O3—C11 | 117.16 (9) | C13—C12—C11 | 178.21 (17) |
C7—C6—C5 | 119.35 (10) | O1—C1—C2 | 124.02 (11) |
C7—C6—H6 | 120.3 | O1—C1—H1 | 118.0 |
C5—C6—H6 | 120.3 | C2—C1—H1 | 118.0 |
C3—C2—C7 | 118.20 (10) | C9—C10—H10 | 176.8 (12) |
C3—C2—C1 | 120.16 (10) | O3—C11—C12 | 108.22 (11) |
C7—C2—C1 | 121.65 (10) | O3—C11—H11A | 110.1 |
C4—C3—C2 | 122.26 (11) | C12—C11—H11A | 110.1 |
C4—C3—H3 | 118.9 | O3—C11—H11B | 110.1 |
C2—C3—H3 | 118.9 | C12—C11—H11B | 110.1 |
C3—C4—C5 | 118.25 (11) | H11A—C11—H11B | 108.4 |
C3—C4—H4 | 120.9 | O2—C8—C9 | 107.67 (9) |
C5—C4—H4 | 120.9 | O2—C8—H8A | 110.2 |
C10—C9—C8 | 177.88 (13) | C9—C8—H8A | 110.2 |
O2—C7—C6 | 123.48 (9) | O2—C8—H8B | 110.2 |
O2—C7—C2 | 115.97 (9) | C9—C8—H8B | 110.2 |
C6—C7—C2 | 120.55 (10) | H8A—C8—H8B | 108.5 |
O3—C5—C6 | 113.87 (10) | C12—C13—H13 | 178.1 (16) |
O3—C5—C4 | 124.74 (10) | ||
C7—C2—C3—C4 | 0.52 (18) | C11—O3—C5—C4 | 4.98 (17) |
C1—C2—C3—C4 | −179.18 (11) | C7—C6—C5—O3 | −179.57 (10) |
C2—C3—C4—C5 | 0.20 (19) | C7—C6—C5—C4 | 0.22 (18) |
C8—O2—C7—C6 | 2.28 (16) | C3—C4—C5—O3 | 179.19 (11) |
C8—O2—C7—C2 | −177.39 (10) | C3—C4—C5—C6 | −0.58 (18) |
C5—C6—C7—O2 | −179.13 (10) | C3—C2—C1—O1 | −2.48 (19) |
C5—C6—C7—C2 | 0.53 (17) | C7—C2—C1—O1 | 177.83 (12) |
C3—C2—C7—O2 | 178.80 (10) | C5—O3—C11—C12 | 178.25 (10) |
C1—C2—C7—O2 | −1.51 (16) | C13—C12—C11—O3 | 166 (6) |
C3—C2—C7—C6 | −0.89 (16) | C7—O2—C8—C9 | −178.20 (10) |
C1—C2—C7—C6 | 178.81 (11) | C10—C9—C8—O2 | −177 (100) |
C11—O3—C5—C6 | −175.24 (11) |
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···O1i | 0.93 | 2.48 | 3.3616 (14) | 159 |
Symmetry code: (i) x+1/2, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C13H10O3 |
Mr | 214.21 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 4.9219 (2), 16.8705 (7), 13.4326 (6) |
β (°) | 98.236 (3) |
V (Å3) | 1103.87 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.20 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART APEXII area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2008) |
Tmin, Tmax | 0.982, 0.982 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10446, 2754, 2177 |
Rint | 0.025 |
(sin θ/λ)max (Å−1) | 0.670 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.113, 1.04 |
No. of reflections | 2754 |
No. of parameters | 154 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.25, −0.16 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···O1i | 0.93 | 2.48 | 3.3616 (14) | 158.5 |
Symmetry code: (i) x+1/2, −y+1/2, z−1/2. |
Acknowledgements
The authors thank TBI Consultancy, University of Madras, India, for the data collection.
References
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The Schiff base derived from amines and substitued benzaldehydes exhibit antibacterial, anticancer and antitumour activities (Zhao et al. (2007)). Several benzaldoximes, benzaldehyde-O-ethyloximes, and acetophenonoximes were synthesized and evaluated as tyrosinase inhibitors (Ley & Bertram (2001)). The bis-salicylaldehydes exhibited greater inhibitory activity than salicylaldehyde (Delogu et al.(2010)).
The ORTEP plot of the molecule is shown in Fig. 1. The dihedral angles of phenyl ring (C2—C7) attached to prop-2-yn-1-yloxy group at 2, 6-positions (O2/C8/C9/C10) & (O3/C11/C12/C13) are 82.3 (1)° & 71.4 (1)°, respectively. The prop-2-yn-1-yloxy group is in an extended conformation which can be seen from torsion angles O2/C8/C9/C10= -177.0 (10)° and O3/C11/C12/C13= 166 (6)°, respectively.
The crystal packing includes an inter-molecular interaction between a terminal ethynyl H atom and an ethynyl group on a glide-related molecule and another interaction between an O-atom-linked methylene H and an ethynyl group of a different glide-related molecule.
The packing of the molecules viewed down a axis is shown in Fig. 2. The molecules are stabilized by C—H···π and bifurcated C—H···O types of intra and intermolecular interactions, which form a dimer C8 chain running along the a axis (Bernstein et al., 1995).